NO09G01350, NO09G01350 (gene) Nannochloropsis oceanica

Overview
NameNO09G01350
Unique NameNO09G01350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2146
Alignment locationchr9:441845..443990 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:441845..443990 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR-dom
IPR001060FCH_dom
Homology
BLAST of NO09G01350 vs. NCBI_GenBank
Match: EWM27639.1 (hypothetical protein Naga_100059g9 [Nannochloropsis gaditana])

HSP 1 Score: 503.4 bits (1295), Expect = 1.000e-138
Identity = 306/656 (46.65%), Postives = 400/656 (60.98%), Query Frame = 0
Query:    1 MASSTASAMPAFFSSRPASDDEASARASSPASTPPYSFATNLLGAFGAVRKKNVQTLKVLEELKTMVKNRASVEEAYSQQLTRVVANHTHGLRHLGEKLTRKAGGGGLSEVEAAKEASLTASHSTFRECVETLKADMLNKAVQRKQLSASILTDVFGPVEEIFNQLAAESKDLEDTISALAKEGRGLEARYRSTHKKHEQAVQLATTTSNFLLEQGHILPTVDIHALYRRHTATSRDNSPPPSSPFDLRKEELSSMVAGSPRLLSGALTNIAKKDLTAWLLPSGKDRQQDLQSTARDNMELAVLLRFACRDRYNELASFARTATHTLQKVLCQYQLCEERSVEELAVMLRKQVVFESSCLANEQYEVQLMFKVIEAVDRDRDLEAFIHAHNVPFPGADVSNTLQSLGXXXXXXXXXXXXXYEGAASTITNTAPCHSSSFDSSVLDRGDLPNLSSPYPHVVPATTVLCLLRGGLSSSRTPTPPLPPFPSTLSSLRIAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPTSAEASRTVKPPTGSVRMQSNHFPLHLGAFDTLKSGLDDSXXXXXXXXXGFSS-QHDKPTAVGIV------ETDIRRNDAPSSLLPLKEVRTADGGVEYRL 650
            MAS+T         S+ ++ DE         S+PPYSFAT+LLG+F  VRK + QTLKVLEEL  M+K RA+VEE YSQQ+ R+V++HTHGLR LGE L RKAGG G++E ++  E S     STFRECVE+LKADMLN++VQRKQL+ +IL DVF P+E+I+++LA+ES+ LED +  L K+GR  E+RYRS HKK+EQAVQLAT   + L E+G  LP++DI  L++R++ +SR  SP   SPFDL+KE+ S+++AGSPR +S A T  AKKD+T WLLP  K R+ DL + A++++E+A L RFAC +R++EL++FAR A H LQ+VLC YQ CEER +E LAV+LRKQ+VFESSCLANEQ+E Q++FKVIEA+D+D+DLEAFIHAH VPFPGADV +TL+SLG              E   ST       H+S   + ++ R DLP+LSSP P VVPATTVL LL G LS+S TPT P P   STL +                                                             AP S      V+P       QS     H    D ++ G +D          GFS+ Q       G+       + +  R+   S L+PL+E+ TADGG+EYRL
Sbjct:    1 MASATTPDSLLSSPSKLSTHDE-----KIHTSSPPYSFATDLLGSFEKVRKNHTQTLKVLEELAIMIKGRAAVEEVYSQQMARLVSDHTHGLRRLGEALARKAGGMGVNEGDSVAETSSCTIESTFRECVESLKADMLNRSVQRKQLAKNILADVFAPLEDIYDRLASESRGLEDLLGTLTKQGRACESRYRSAHKKYEQAVQLATNACDILTEKGQSLPSLDIKLLHQRYSNSSRAASPATPSPFDLKKEDFSAILAGSPRKISEAFTQAAKKDITTWLLPLDKGRRDDLDTIAKNHLEMAELFRFACLERFDELSTFARRAAHELQRVLCHYQSCEERCIERLAVVLRKQIVFESSCLANEQFEAQIIFKVIEAMDKDKDLEAFIHAHKVPFPGADVDSTLKSLGLIGNPLPAPPASPEEIGKSTCDENL-LHASG--TVIVGREDLPHLSSPAPRVVPATTVLRLLGGNLSASGTPT-PTPHHSSTLRTTN--GNPFSDFSSMLNKSLRSPLAAALSSKNAAPPPDAPSQVLMSPPVPEVGLEGLPFELQAPPSVRLGNMVEP------TQSLDDEGHDSVEDEIEEGENDD--------EGFSALQKHARRLRGVAKEYSPYQEEGNRSAISSPLIPLEEILTADGGIEYRL 631          
BLAST of NO09G01350 vs. NCBI_GenBank
Match: XP_008861729.1 (hypothetical protein H310_00651 [Aphanomyces invadans] >ETW10318.1 hypothetical protein H310_00651 [Aphanomyces invadans])

HSP 1 Score: 135.6 bits (340), Expect = 5.600e-28
Identity = 113/395 (28.61%), Postives = 179/395 (45.32%), Query Frame = 0
Query:   31 ASTPPYSFATNLLGAFGAVRKKNVQTLKVLEELKTMVKNRASVEEAYSQQLTRVVANHTHGLRHLGEKLTRKAGGGGLSEVEAAKEASLTASHSTFRECVETLKADMLNKAVQRKQLSASILTDVFGPVEEIFNQLAAESKDLEDTISALAKEGRGLEARYRSTHKKHEQAVQLATTTSNFLLEQG-----------------------------------HILPTVDIHALYRRHTATSRDNSPPPSSPFDLRKEELSSMVAGSPRLLSGALTNIAKKDLTAWLLPSGKDRQQDLQSTARDNMELAVLLRFACRDRYNELASFARTATHTLQKVLCQYQLCEERSVEELAVMLRKQVVFESSCLANEQYEVQLMFKVIEAVDRDRDLEAFIHAH 391
            ++ P  SF T+LL    AVRK+    L       TM+K R  +E+ Y+ +L+R+       +    E   R  GG   SE +A  E       S+ +E +  LKA   N +VQ K L+ ++  DV+ P+  ++  LA +   L    + + K+ +  E  YR  H K E+  + ATTT    +E G                                   ++ P  + H+   +H+  +   + P  SP       +++   G PR  S +  ++    L  WLLPSG+ ++++L  T+   +E A + R  CR  +N           ++Q +L  YQ   E S+  L   LRK V+FESS LAN QY+ Q++  V+EAVD + D+ AFI AH
Sbjct:    6 STIPGLSFPTDLLFNLDAVRKQCTADLATHNACLTMLKGRLQLEQYYAAELSRLADQFR--IEDDIECSDRNDGGASKSE-DARGEDDRPGRSSSLKEALRGLKAQYTNTSVQHKALATNLEEDVYRPMHTLYKYLAKKESKLTVCTTRVRKQTKAFEDLYRRQHSKFEKQFKDATTTYAQAMEIGIAGEIIHNQYLASPVXXXXXXXXXXXXXXXXXXAEYLQPVPNDHS--PQHSPDTVKVTSPAKSP---HSSHITASEGGRPRSNSMSRASLDGTKLVNWLLPSGQQKKENLLLTSVKAIENAEVARHECRAAWNGFEDARVALFRSIQSILNDYQHLAEYSISNLTSSLRKHVIFESSALANSQYDWQMLASVMEAVDAEGDIRAFILAH 392          
BLAST of NO09G01350 vs. NCBI_GenBank
Match: XP_008861730.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW10319.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 135.6 bits (340), Expect = 5.600e-28
Identity = 113/395 (28.61%), Postives = 179/395 (45.32%), Query Frame = 0
Query:   31 ASTPPYSFATNLLGAFGAVRKKNVQTLKVLEELKTMVKNRASVEEAYSQQLTRVVANHTHGLRHLGEKLTRKAGGGGLSEVEAAKEASLTASHSTFRECVETLKADMLNKAVQRKQLSASILTDVFGPVEEIFNQLAAESKDLEDTISALAKEGRGLEARYRSTHKKHEQAVQLATTTSNFLLEQG-----------------------------------HILPTVDIHALYRRHTATSRDNSPPPSSPFDLRKEELSSMVAGSPRLLSGALTNIAKKDLTAWLLPSGKDRQQDLQSTARDNMELAVLLRFACRDRYNELASFARTATHTLQKVLCQYQLCEERSVEELAVMLRKQVVFESSCLANEQYEVQLMFKVIEAVDRDRDLEAFIHAH 391
            ++ P  SF T+LL    AVRK+    L       TM+K R  +E+ Y+ +L+R+       +    E   R  GG   SE +A  E       S+ +E +  LKA   N +VQ K L+ ++  DV+ P+  ++  LA +   L    + + K+ +  E  YR  H K E+  + ATTT    +E G                                   ++ P  + H+   +H+  +   + P  SP       +++   G PR  S +  ++    L  WLLPSG+ ++++L  T+   +E A + R  CR  +N           ++Q +L  YQ   E S+  L   LRK V+FESS LAN QY+ Q++  V+EAVD + D+ AFI AH
Sbjct:    6 STIPGLSFPTDLLFNLDAVRKQCTADLATHNACLTMLKGRLQLEQYYAAELSRLADQFR--IEDDIECSDRNDGGASKSE-DARGEDDRPGRSSSLKEALRGLKAQYTNTSVQHKALATNLEEDVYRPMHTLYKYLAKKESKLTVCTTRVRKQTKAFEDLYRRQHSKFEKQFKDATTTYAQAMEIGIAGEIIHNQYLASPVXXXXXXXXXXXXXXXXXXAEYLQPVPNDHS--PQHSPDTVKVTSPAKSP---HSSHITASEGGRPRSNSMSRASLDGTKLVNWLLPSGQQKKENLLLTSVKAIENAEVARHECRAAWNGFEDARVALFRSIQSILNDYQHLAEYSISNLTSSLRKHVIFESSALANSQYDWQMLASVMEAVDAEGDIRAFILAH 392          
BLAST of NO09G01350 vs. NCBI_GenBank
Match: XP_009846209.1 (hypothetical protein H257_18784 [Aphanomyces astaci] >XP_009846283.1 hypothetical protein H257_18850 [Aphanomyces astaci] >ETV64234.1 hypothetical protein H257_18850 [Aphanomyces astaci] >ETV64306.1 hypothetical protein H257_18784 [Aphanomyces astaci])

HSP 1 Score: 127.5 bits (319), Expect = 1.500e-25
Identity = 111/404 (27.48%), Postives = 175/404 (43.32%), Query Frame = 0
Query:   34 PPYSFATNLLGAFGAVRKKNVQTLKVLEELKTMVKNRASVEEAYSQQLTRV-----VANHTHGLRHLGEKLTRKAGGGGLSEVEAAKEASLTASHSTFRECVETLKADMLNKAVQRKQLSASILTDVFGPVEEIFNQLAAESKDLEDTISALAKEGRGLEARYRSTHKKHEQAVQLATTT---------------SNFLLEQGHILPTVDIHALYR---------------------RH------TATSRDNSPPPSSPFDLRKEELSSMVAGSPRLLSGALTNIAKKDLTAWLLPSGKDRQQDLQSTARDNMELAVLLRFACRDRYNELASFARTATHTLQKVLCQYQLCEERSVEELAVMLRKQVVFESSCLANEQYEVQLMFKVIEAVDRDRDLEAFIHAH 391
            P  SF T+LL    AVRK     L       +M+K R  +E  Y+ +L R+     + +       +G +L    G  G  + +       T+  ST +E +  L+A   N +VQ K L+A++  DV+ P+  ++  L  +   L    + + K+ +  E  YR  H K ++  + A+TT               + +L    H+ P    H   R                     +H      T  +    PPPSSP     +   +     PR  S + + +    L +WLLPSG+ ++ +L  T+   +E A   R  CR  +N           ++Q +L  YQ   E S+  L   LRK V+FESS LAN QY+ Q++  V+EAVD +RD+ AFI A+
Sbjct:    9 PGLSFPTDLLFNLDAVRKHCTADLATHNACLSMLKGRMQLEHYYATELARLADQFKIDDEDDSNDPVGAELGAIDGKRGADDDDGDGGNDRTSRSSTLKEALRGLRAQYTNTSVQHKALAANLDEDVYQPMHTLYKYLVKKESKLTVCTTRVRKQTKAFEEHYRKQHIKFDKHFKDASTTYAQAMDVGIAREIIHNQYLASPVHLRPHEKHHPDKRTTPPPTHSLDPAATSDAVSSPQHSPELITTIGTPAKPPPPSSPHITVSDGTGN--TSRPRSTSMSRSTLDGTKLVSWLLPSGQQKKDNLLITSVKAIETAETSRHECRVAWNGFEDARVALFRSIQSILNDYQHMAEYSISNLTASLRKHVIFESSALANSQYDWQMLATVMEAVDAERDIRAFIVAN 410          
BLAST of NO09G01350 vs. NCBI_GenBank
Match: XP_008616906.1 (hypothetical protein SDRG_12609 [Saprolegnia diclina VS20] >EQC29602.1 hypothetical protein SDRG_12609 [Saprolegnia diclina VS20])

HSP 1 Score: 119.0 bits (297), Expect = 5.400e-23
Identity = 104/362 (28.73%), Postives = 170/362 (46.96%), Query Frame = 0
Query:   32 STPPYSFATNLLGAFGAVRKKNVQTLKVLEELKTMVKNRASVEEAYSQQLTRVVANHTHGLRHLGEKLTRKAGGGGLSEVEAAKEASLTASHSTFRECVETLKADMLNKAVQRKQLSASILTDVFGPVEEIFNQLAAESKDLEDTISALAKEGRGLEARYRSTHKKHEQAVQLATTTSNFLLEQGHILPTVDIHALYRRHTATSRDNSPPPSSPF--DLRKEELSSMVAGSPRLLSGALTNIAKKDLTAWLLPSGKDRQQDLQSTARDNMELAVLLRFACRDRYNELASFARTATHTLQKVLCQYQLCEERSVEELAVMLRKQVVFESSCLANEQYEVQLMFKVIEAVDRDRDLEAFIHAHN 392
            + P  SFAT+LL    AVRK     L   + L +++K R  +E  Y+ +LTR+          + + +        +S + AA               + ++K+  +N +VQ K L+AS+  DV+ P+  ++  LA + +     ++ + K+ + LE  +R  H K ++  + AT T    LE G I P V    +   + ++S +N+   S+ F  +L  +   +    S         +I    L +WLLP+   +++ L   A   +E A   RF CR  Y            + Q +L  YQ   E+   +L+  LRK +VFES+ LAN QY+ Q++ K +EAVD D DL AFI  HN
Sbjct:    7 TVPGLSFATDLLFNLDAVRKACGSGLSTHQGLLSLLKGRVQLELHYAAELTRLADQF-----KVDQDMADLHPSSYVSSLNAA---------------LLSVKSQYVNASVQHKSLAASLDEDVYRPLNALYQSLAKKEQSTTSCMARVRKQAKALEENFRKQHAKMDKTFKEATMTYAQALEAG-IAPRVIQEQV--GNESSSSNNALEDSTSFLGELFPKRRPTTTIASRN------ASIDSVKLVSWLLPNEHQKKESLAVAAARAVESAEAARFECRQAYAGFEDARVALYRSTQSILNDYQTISEQRSTQLSTSLRKHIVFESATLANLQYDWQMVAKPLEAVDVDADLRAFI-LHN 338          
BLAST of NO09G01350 vs. NCBI_GenBank
Match: ETI51583.1 (hypothetical protein F443_05098 [Phytophthora parasitica P1569])

HSP 1 Score: 118.6 bits (296), Expect = 7.100e-23
Identity = 100/363 (27.55%), Postives = 164/363 (45.18%), Query Frame = 0
Query:   29 SPASTPPY-SFATNLLGAFGAVRKKNVQTLKVLEELKTMVKNRASVEEAYSQQLTRVVANHTHGLRHLGEKLTRKAGGGGLSEVEAAKEASLTASHSTFRECVETLKADMLNKAVQRKQLSASILTDVFGPVEEIFNQLAAESKDLEDTISALAKEGRGLEARYRSTHKKHEQAVQLATTTSNFLLEQGHILPTVDIHALYRRHTATSRDNSPPPSSPFDLRKEELSSMVAGSPRLLSGALTNIAKKDLTAWLLPSG-KDRQQDLQSTARDNMELAVLLRFACRDRYNELASFARTATHTLQKVLCQYQLCEERSVEELAVMLRKQVVFESSCLANEQYEVQLMFKVIEAVDRDRDLEAFIHA 390
            SP+S+P   +FAT+LL     VR   V  L     L TM+++R ++E  Y+Q+L R +A H+    HLGE                         H T +  +E+L++  LN +VQ + L+ ++  DV  P+E ++   +   + L   I+   K+ +  E  YR  +   ++  + A+T  +  +  G    +  +   Y R  +   D   P  +         +   +G     + AL +I  + L +WL PS    R+++L +     M  A   R  C+  + E+ +       T+Q VL  YQ   E  +E +   LRK VVF SS LANEQY+ Q +   +E VD   D+  FIH+
Sbjct:   15 SPSSSPSEPAFATDLLFNLDDVRAACVSDLAAHANLVTMLRSRINLERTYAQELNR-IARHS----HLGE-----------------------MDHGTMKNAMESLRSQYLNTSVQHQHLAKNLEEDVLLPIEVLYEYNSERVQSLTRRINNAKKDVKAQEDFYRKDYSTFDKNFREASTAFSAAMNSG--FSSTILEDQYHRRLSQLEDTDSPVKAKSSTALTTRTEKPSG-----AAALKSIHNRKLVSWLRPSSDSHRKEELANNTVKLMATAEKSRMKCQQTWQEVEANRIRMYRTVQAVLADYQQIAEDRIETITTNLRKHVVFASSALANEQYDWQTVAPKLEDVDAKSDIRDFIHS 342          
BLAST of NO09G01350 vs. NCBI_GenBank
Match: ETM51209.1 (hypothetical protein L914_04914 [Phytophthora parasitica])

HSP 1 Score: 118.6 bits (296), Expect = 7.100e-23
Identity = 100/363 (27.55%), Postives = 164/363 (45.18%), Query Frame = 0
Query:   29 SPASTPPY-SFATNLLGAFGAVRKKNVQTLKVLEELKTMVKNRASVEEAYSQQLTRVVANHTHGLRHLGEKLTRKAGGGGLSEVEAAKEASLTASHSTFRECVETLKADMLNKAVQRKQLSASILTDVFGPVEEIFNQLAAESKDLEDTISALAKEGRGLEARYRSTHKKHEQAVQLATTTSNFLLEQGHILPTVDIHALYRRHTATSRDNSPPPSSPFDLRKEELSSMVAGSPRLLSGALTNIAKKDLTAWLLPSG-KDRQQDLQSTARDNMELAVLLRFACRDRYNELASFARTATHTLQKVLCQYQLCEERSVEELAVMLRKQVVFESSCLANEQYEVQLMFKVIEAVDRDRDLEAFIHA 390
            SP+S+P   +FAT+LL     VR   V  L     L TM+++R ++E  Y+Q+L R +A H+    HLGE                         H T +  +E+L++  LN +VQ + L+ ++  DV  P+E ++   +   + L   I+   K+ +  E  YR  +   ++  + A+T  +  +  G    +  +   Y R  +   D   P  +         +   +G     + AL +I  + L +WL PS    R+++L +     M  A   R  C+  + E+ +       T+Q VL  YQ   E  +E +   LRK VVF SS LANEQY+ Q +   +E VD   D+  FIH+
Sbjct:   15 SPSSSPSEPAFATDLLFNLDDVRAACVSDLAAHANLVTMLRSRINLERTYAQELNR-IARHS----HLGE-----------------------MDHGTMKNAMESLRSQYLNTSVQHQHLAKNLEEDVLLPIEVLYEYNSERVQSLTRRINNAKKDVKAQEDFYRKDYSTFDKNFREASTAFSAAMNSG--FSSTILEDQYHRRLSQLEDTDSPVKAKSSTALTTRTEKPSG-----AAALKSIHNRKLVSWLRPSSDSHRKEELANNTVKLMATAEKSRMKCQQTWQEVEANRIRMYRTVQAVLADYQQIAEDRIETITTNLRKHVVFASSALANEQYDWQTVAPKLEDVDAKSDIRDFIHS 342          
BLAST of NO09G01350 vs. NCBI_GenBank
Match: ETO80340.1 (hypothetical protein F444_05135 [Phytophthora parasitica P1976] >ETP49281.1 hypothetical protein F442_05157 [Phytophthora parasitica P10297])

HSP 1 Score: 118.6 bits (296), Expect = 7.100e-23
Identity = 100/363 (27.55%), Postives = 164/363 (45.18%), Query Frame = 0
Query:   29 SPASTPPY-SFATNLLGAFGAVRKKNVQTLKVLEELKTMVKNRASVEEAYSQQLTRVVANHTHGLRHLGEKLTRKAGGGGLSEVEAAKEASLTASHSTFRECVETLKADMLNKAVQRKQLSASILTDVFGPVEEIFNQLAAESKDLEDTISALAKEGRGLEARYRSTHKKHEQAVQLATTTSNFLLEQGHILPTVDIHALYRRHTATSRDNSPPPSSPFDLRKEELSSMVAGSPRLLSGALTNIAKKDLTAWLLPSG-KDRQQDLQSTARDNMELAVLLRFACRDRYNELASFARTATHTLQKVLCQYQLCEERSVEELAVMLRKQVVFESSCLANEQYEVQLMFKVIEAVDRDRDLEAFIHA 390
            SP+S+P   +FAT+LL     VR   V  L     L TM+++R ++E  Y+Q+L R +A H+    HLGE                         H T +  +E+L++  LN +VQ + L+ ++  DV  P+E ++   +   + L   I+   K+ +  E  YR  +   ++  + A+T  +  +  G    +  +   Y R  +   D   P  +         +   +G     + AL +I  + L +WL PS    R+++L +     M  A   R  C+  + E+ +       T+Q VL  YQ   E  +E +   LRK VVF SS LANEQY+ Q +   +E VD   D+  FIH+
Sbjct:   15 SPSSSPSEPAFATDLLFNLDDVRAACVSDLAAHANLVTMLRSRINLERTYAQELNR-IARHS----HLGE-----------------------MDHGTMKNAMESLRSQYLNTSVQHQHLAKNLEEDVLLPIEVLYEYNSERVQSLTRRINNAKKDVKAQEDFYRKDYSTFDKNFREASTAFSAAMNSG--FSSTILEDQYHRRLSQLEDTDSPVKAKSSTALTTRTEKPSG-----AAALKSIHNRKLVSWLRPSSDSHRKEELANNTVKLMATAEKSRMKCQQTWQEVEANRIRMYRTVQAVLADYQQIAEDRIETITTNLRKHVVFASSALANEQYDWQTVAPKLEDVDAKSDIRDFIHS 342          
BLAST of NO09G01350 vs. NCBI_GenBank
Match: ETK91471.1 (hypothetical protein L915_04962 [Phytophthora parasitica])

HSP 1 Score: 118.2 bits (295), Expect = 9.200e-23
Identity = 100/363 (27.55%), Postives = 164/363 (45.18%), Query Frame = 0
Query:   29 SPASTPPY-SFATNLLGAFGAVRKKNVQTLKVLEELKTMVKNRASVEEAYSQQLTRVVANHTHGLRHLGEKLTRKAGGGGLSEVEAAKEASLTASHSTFRECVETLKADMLNKAVQRKQLSASILTDVFGPVEEIFNQLAAESKDLEDTISALAKEGRGLEARYRSTHKKHEQAVQLATTTSNFLLEQGHILPTVDIHALYRRHTATSRDNSPPPSSPFDLRKEELSSMVAGSPRLLSGALTNIAKKDLTAWLLPSG-KDRQQDLQSTARDNMELAVLLRFACRDRYNELASFARTATHTLQKVLCQYQLCEERSVEELAVMLRKQVVFESSCLANEQYEVQLMFKVIEAVDRDRDLEAFIHA 390
            SP+S+P   +FAT+LL     VR   V  L     L TM+++R ++E  Y+Q+L R +A H+    HLGE                         H T +  +E+L++  LN +VQ + L+ ++  DV  P+E ++   +   + L   I+   K+ +  E  YR  +   ++  + A+T  +  +  G    +  +   Y R  +   D   P  +         +   +G     + AL +I  + L +WL PS    R+++L +     M  A   R  C+  + E+ +       T+Q VL  YQ   E  +E +   LRK VVF SS LANEQY+ Q +   +E VD   D+  FIH+
Sbjct:   15 SPSSSPSEPAFATDLLFNLDDVRAACVSDLAAHANLVTMLRSRINLERTYAQELNR-MARHS----HLGE-----------------------MDHGTMKNAMESLRSQYLNTSVQHQHLAKNLEEDVLQPIEVLYEYNSERVQSLTRRINNAKKDVKAQEDFYRKDYSTFDKNFREASTAFSAAMNSG--FSSTILEDQYHRRLSQLEDTDSPVKAKSSTALTTRTEKPSG-----AAALKSIHNRKLVSWLRPSSDSHRKEELGNNTVKLMATAEKSRMKCQQTWQEVEANRIRMYRTVQAVLADYQQIAEDRIETITTNLRKHVVFASSALANEQYDWQTVAPKLEDVDAKSDIRDFIHS 342          
BLAST of NO09G01350 vs. NCBI_GenBank
Match: ETL44876.1 (hypothetical protein L916_04910 [Phytophthora parasitica] >ETL98035.1 hypothetical protein L917_04809 [Phytophthora parasitica])

HSP 1 Score: 117.9 bits (294), Expect = 1.200e-22
Identity = 100/363 (27.55%), Postives = 164/363 (45.18%), Query Frame = 0
Query:   29 SPASTPPY-SFATNLLGAFGAVRKKNVQTLKVLEELKTMVKNRASVEEAYSQQLTRVVANHTHGLRHLGEKLTRKAGGGGLSEVEAAKEASLTASHSTFRECVETLKADMLNKAVQRKQLSASILTDVFGPVEEIFNQLAAESKDLEDTISALAKEGRGLEARYRSTHKKHEQAVQLATTTSNFLLEQGHILPTVDIHALYRRHTATSRDNSPPPSSPFDLRKEELSSMVAGSPRLLSGALTNIAKKDLTAWLLPSG-KDRQQDLQSTARDNMELAVLLRFACRDRYNELASFARTATHTLQKVLCQYQLCEERSVEELAVMLRKQVVFESSCLANEQYEVQLMFKVIEAVDRDRDLEAFIHA 390
            SP+S+P   +FAT+LL     VR   V  L     L TM+++R ++E  Y+Q+L R +A H+    HLGE                         H T +  +E+L++  LN +VQ + L+ ++  DV  P+E ++   +   + L   I+   K+ +  E  YR  +   ++  + A+T  +  +  G    +  +   Y R  +   D   P  +         +   +G     + AL +I  + L +WL PS    R+++L +     M  A   R  C+  + E+ +       T+Q VL  YQ   E  +E +   LRK VVF SS LANEQY+ Q +   +E VD   D+  FIH+
Sbjct:   15 SPSSSPSEPAFATDLLFNLDDVRAACVSDLAAHANLVTMLRSRINLERTYAQELNR-MARHS----HLGE-----------------------MDHGTMKNAMESLRSQYLNTSVQHQHLAKNLEEDVLLPIEVLYEYNSERVQSLTRRINNAKKDVKAQEDFYRKDYSTFDKNFREASTAFSAAMNSG--FSSTILEDQYHRRLSQLEDTDSPVKAKSSTALTTRTEKPSG-----AAALKSIHNRKLVSWLRPSSDSHRKEELANNTVKLMATAEKSRMKCQQTWQEVEANRIRMYRTVQAVLADYQQIAEDRIETITTNLRKHVVFASSALANEQYDWQTVAPKLEDVDAKSDIRDFIHS 342          
The following BLAST results are available for this feature:
BLAST of NO09G01350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27639.11.000e-13846.65hypothetical protein Naga_100059g9 [Nannochloropsi... [more]
XP_008861729.15.600e-2828.61hypothetical protein H310_00651 [Aphanomyces invad... [more]
XP_008861730.15.600e-2828.61hypothetical protein, variant [Aphanomyces invadan... [more]
XP_009846209.11.500e-2527.48hypothetical protein H257_18784 [Aphanomyces astac... [more]
XP_008616906.15.400e-2328.73hypothetical protein SDRG_12609 [Saprolegnia dicli... [more]
ETI51583.17.100e-2327.55hypothetical protein F443_05098 [Phytophthora para... [more]
ETM51209.17.100e-2327.55hypothetical protein L914_04914 [Phytophthora para... [more]
ETO80340.17.100e-2327.55hypothetical protein F444_05135 [Phytophthora para... [more]
ETK91471.19.200e-2327.55hypothetical protein L915_04962 [Phytophthora para... [more]
ETL44876.11.200e-2227.55hypothetical protein L916_04910 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010624NSK010624Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01350.1NO09G01350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589049gene_4419Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100059g9gene2908Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01350.1NO09G01350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01350 ID=NO09G01350|Name=NO09G01350|organism=Nannochloropsis oceanica|type=gene|length=2146bp
CAGAAGGCAAACAATGGCCTCGTCTACTGCGTCTGCGATGCCTGCCTTTT
TCAGCAGCCGCCCCGCCAGCGATGACGAAGCCTCTGCTCGTGCGTCTTCC
CCGGCCTCGACGCCACCCTATTCCTTCGCCACTAATCTGTTGGGCGCCTT
TGGGGCGGTCCGCAAAAAGAATGTCCAGACACTCAAGGTCTTGGAGGAGC
TCAAGACCATGGTCAAGAACCGGGCCTCCGTCGAAGAGGCCTATTCGCAG
CAATTGACCCGCGTCGTGGCCAACCACACCCACGGCCTGCGTCATCTGGG
CGAGAAACTAACACGCAAAGCAGGCGGGGGTGGGCTTAGCGAGGTGGAGG
CGGCCAAGGAGGCGAGTCTGACTGCCAGTCACAGCACATTTCGGGAGTGC
GTGGAGACCTTAAAGGCAGACATGCTCAACAAGGCCGTGCAACGCAAGCA
GCTTTCGGCAAGTATTCTCACCGATGTCTTTGGCCCAGTCGAAGAAATTT
TCAACCAACTGGCGGCGGAAAGCAAGGACTTGGAAGATACGATTTCAGCC
TTGGCGAAAGAGGGACGGGGGCTCGAGGCCAGGTACCGCTCCACGCACAA
GAAACACGAGCAGGCCGTCCAGCTCGCCACAACCACGAGCAATTTCTTAT
TGGAACAAGGTCATATCCTCCCAACCGTGGACATACATGCACTCTATCGA
CGGCATACGGCCACGTCCCGCGACAACAGTCCACCGCCCTCCTCACCTTT
TGACCTGAGGAAGGAGGAACTGAGCAGCATGGTCGCGGGTAGTCCTAGAC
TTCTCTCAGGTGCCCTCACTAATATAGCCAAGAAGGACCTTACgtgagtg
cataattaggtttgggtcaagcgtgcaggatggatatgggtacctctctg
ttctcctcaccctcctaccaccgccattccacaaaatagCGCCTGGCTTC
TCCCCTCCGGCAAAGACCGTCAACAAGACCTACAATCCACCGCACGGGAC
AACATGGAATTGGCTGTATTGCTTCGCTTTGCCTGTCGGGACCGCTACAA
CGAGCTTGCCAGCTTTGCTCGCACGGCCACTCACACCTTACAAAAGGTAT
TATGTCAATATCAATTATGCGAGGAAAGGTCCGTGGAAGAGCTGGCGGTG
ATGCTGCGGAAGCAGGTGGTGTTCGAGTCGAGTTGCTTGGCGAATGAACA
GTATGAGGTTCAACTTATGTTTAAGGTCATTGAAGCTGTTGATCGGGACA
GGGATTTAGAAGCCTTTATTCATGCGCACAATGTCCCCTTTCCCGGCGCG
GACGTAAGCAATACGCTCCAAAGCCTTGGATTGTCTCTCTCCTCCCCCTT
GCCTGCACCACCACCTCCTTATGAAGGTGCTGCTAGTACGATCACAAACA
CTGCACCCTGTCATTCCTCCTCCTTTGACTCCTCGGTGTTGGATAGGGGG
GATCTGCCCAACCTCAGCAGCCCCTACCCCCACGTTGTGCCGGCTACAAC
AGTTCTCTGCCTGCTTCGCGGAGGCTTATCTAGCTCCCGCACTCCAACAC
CTCCTCTTCCACCTTTTCCCAGCACCTTATCCTCCCTGCGAATCGCGAAA
AAACTTTCTCCTTTTCCTTCTATTTGTTCTCTTTCCATGACGTCCACTCC
TAGCAGTAAGAGTCCCTCGCCTCTTCATCTTGTTTCCTCCAGTGCCCCTA
CCTCCTCTTCCATTTCGTCACGCACTATCGTCTTTCCTCCTCCCTCCGAT
GATTCATCGAACTCACCTGCTCCTACATCTGCAGAAGCATCGAGAACAGT
AAAGCCGCCAACCGGATCCGTGCGTATGCAATCAAACCATTTTCCACTTC
ATCTCGGTGCGTTTGACACTCTTAAATCCGGTCTAGACGATAGTGAGGAC
GAGGACGAGGACGAGGATAAAGGATTCTCCTCGCAGCACGACAAGCCGAC
GGCAGTAGGGATAGTAGAGACAGATATCAGGAGGAACGATGCACCCTCTT
CTCTTCTGCCCTTGAAGGAGGTCCGAACGGCGGATGGTGGAGTAGAATAC
CGGTTGTAGACGGTAGGTATGCATGGATGTGTACAAGGATCGAACATGTG
GGGTTGAGGAAACAATTTGAGAAATAAGCGAAGAGCGAGATCGAGC
back to top

protein sequence of NO09G01350.1

>NO09G01350.1-protein ID=NO09G01350.1-protein|Name=NO09G01350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=650bp
MASSTASAMPAFFSSRPASDDEASARASSPASTPPYSFATNLLGAFGAVR
KKNVQTLKVLEELKTMVKNRASVEEAYSQQLTRVVANHTHGLRHLGEKLT
RKAGGGGLSEVEAAKEASLTASHSTFRECVETLKADMLNKAVQRKQLSAS
ILTDVFGPVEEIFNQLAAESKDLEDTISALAKEGRGLEARYRSTHKKHEQ
AVQLATTTSNFLLEQGHILPTVDIHALYRRHTATSRDNSPPPSSPFDLRK
EELSSMVAGSPRLLSGALTNIAKKDLTAWLLPSGKDRQQDLQSTARDNME
LAVLLRFACRDRYNELASFARTATHTLQKVLCQYQLCEERSVEELAVMLR
KQVVFESSCLANEQYEVQLMFKVIEAVDRDRDLEAFIHAHNVPFPGADVS
NTLQSLGLSLSSPLPAPPPPYEGAASTITNTAPCHSSSFDSSVLDRGDLP
NLSSPYPHVVPATTVLCLLRGGLSSSRTPTPPLPPFPSTLSSLRIAKKLS
PFPSICSLSMTSTPSSKSPSPLHLVSSSAPTSSSISSRTIVFPPPSDDSS
NSPAPTSAEASRTVKPPTGSVRMQSNHFPLHLGAFDTLKSGLDDSEDEDE
DEDKGFSSQHDKPTAVGIVETDIRRNDAPSSLLPLKEVRTADGGVEYRL*
back to top
Synonyms
Publications