NO09G01180, NO09G01180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_009828280.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV82611.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8 Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0 Query: 532 RSNCNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEA 579 R+ CNCKKS+CLKLYCECF G C +CKC C NIP+F+ +R EA Sbjct: 444 RNPCNCKKSQCLKLYCECFASGSVCDENCKCVGCHNIPKFDIQRKEA 490
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_017621062.1 (PREDICTED: protein tesmin/TSO1-like CXC 4 [Gossypium arboreum] >KHG06268.1 Protein lin-54 [Gossypium arboreum]) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 535 CNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 CNCKKS+CLKLYC+CF G C C CQ C N PE+E+ +E R++IE Sbjct: 525 CNCKKSKCLKLYCDCFAAGIYCAEPCSCQGCFNRPEYESTVLETRQQIE 573
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_012464540.1 (PREDICTED: CRC domain-containing protein TSO1-like [Gossypium raimondii] >KJB83333.1 hypothetical protein B456_013G241500 [Gossypium raimondii]) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 535 CNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 CNCKKS+CLKLYC+CF G C C CQ C N PE+E+ +E R++IE Sbjct: 526 CNCKKSKCLKLYCDCFAAGIYCAEPCSCQGCFNRPEYESTVLETRQQIE 574
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_021854759.1 (protein tesmin/TSO1-like CXC 2 [Spinacia oleracea] >KNA06694.1 hypothetical protein SOVF_178640 [Spinacia oleracea]) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0 Query: 535 CNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 CNC+K++CLKLYC+CF GF CG SC C C N PE+E +E R++IE Sbjct: 458 CNCRKTKCLKLYCDCFAAGFYCGESCACVGCFNRPEYEDTVLETRQQIE 506
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_015573811.1 (PREDICTED: CRC domain-containing protein TSO1 isoform X3 [Ricinus communis]) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8 Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 0 Query: 512 NSITKKALHLVAAGRNNSPDRSNCNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 N ++ K A N+S CNCK+S+CLKLYCECF G C SC C++C N PE+E ++ R++IE Sbjct: 321 NQVSSKQNRKRAKPINDSEGCKRCNCKRSKCLKLYCECFAAGVYCLDSCACEDCFNRPEYEDTVLDTRQQIE 392
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_016725547.1 (PREDICTED: CRC domain-containing protein TSO1-like [Gossypium hirsutum]) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 535 CNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 CNCKKS+CLKLYC+CF G C C CQ C N PE+E+ +E R++IE Sbjct: 526 CNCKKSKCLKLYCDCFAAGIYCAEPCSCQGCFNRPEYESTVLETRQQIE 574
BLAST of NO09G01180 vs. NCBI_GenBank
Match: OQR93122.1 (tesmin/TSO1-like CXC domain-containing protein [Thraustotheca clavata]) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8 Identity = 31/47 (65.96%), Postives = 34/47 (72.34%), Query Frame = 0 Query: 532 RSNCNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEA 579 R+ CNCKKS+CLKLYCECF G C SCKC C+N PEFE R EA Sbjct: 365 RNPCNCKKSKCLKLYCECFASGGFCDESCKCVGCSNTPEFENLRKEA 411
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_021758162.1 (protein tesmin/TSO1-like CXC 2 [Chenopodium quinoa]) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0 Query: 535 CNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 CNC+K++CLKLYC+CF GF CG SC C C N PE+E +E R++IE Sbjct: 472 CNCRKTKCLKLYCDCFAAGFYCGESCACVGCFNRPEYEDTVLETRQQIE 520
BLAST of NO09G01180 vs. NCBI_GenBank
Match: XP_021737993.1 (protein tesmin/TSO1-like CXC 3 [Chenopodium quinoa]) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0 Query: 535 CNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 CNC+K++CLKLYC+CF GF CG SC C C N PE+E +E R++IE Sbjct: 470 CNCRKTKCLKLYCDCFAAGFYCGESCACVGCFNRPEYEDTVLETRQQIE 518
BLAST of NO09G01180 vs. NCBI_GenBank
Match: PPD79716.1 (hypothetical protein GOBAR_DD23347 [Gossypium barbadense]) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 535 CNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIE 584 CNCKKS+CLKLYC+CF G C C CQ C N PE+E+ +E R++IE Sbjct: 290 CNCKKSKCLKLYCDCFAAGIYCAEPCSCQGCFNRPEYESTVLETRQQIE 338 The following BLAST results are available for this feature:
BLAST of NO09G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01180 ID=NO09G01180|Name=NO09G01180|organism=Nannochloropsis oceanica|type=gene|length=4835bpback to top protein sequence of NO09G01180.1 >NO09G01180.1-protein ID=NO09G01180.1-protein|Name=NO09G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=782bpback to top protein sequence of NO09G01180.2 >NO09G01180.2-protein ID=NO09G01180.2-protein|Name=NO09G01180.2|organism=Nannochloropsis oceanica|type=polypeptide|length=679bpback to top Synonyms
Publications
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