NO09G01180.1, NO09G01180.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G01180.1
Unique Name	NO09G01180.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4351
Alignment location	chr9:382761..387595 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:382761..387595 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO09G01180.1 vs.
Match: EWM27666.1 (Tesmin/TSO1-like cysteine-rich [Nannochloropsis gaditana])

HSP 1 Score: 555.4 bits (1430), Expect = 2.700e-154
Identity = 401/828 (48.43%), Postives = 483/828 (58.33%), Query Frame = 0

Query:    1 MAATNQAPSIEEESEAAKALWEITNSPGLTNKGPSCLTPRGPACRDHPLGFPTPQGVGQGSPSMNYNRFFSPSQFSWSPLPGHSPAPQPNAVHA--SHGSHSSSSMPSFLSSLASTTTCTEIAHSGMGTGAEEGAAAVDKAAASAALYA-AAGIGGGGGEAGGVIKKKAYSKKLDFAVPSSEKASRVWLSLDTESQRVARTGPRAAPPASPAVAGGG---RDSHFFVTQSPFKYQGDGLEDFFASSTGVSNS---------ENGSTGDSDSSGS--------GSRRGGRPGGETTVNVSLCEAQKDVVVDHQQKWEEESGGGREEGQQLQAVELVTDETSRLSYYGSGDSRGLPFTPLPVNAIAMNQHGGSNWGGIQVRVKKTTPSHTLHHNNTSLLDALAAMVPLHDDASHSPSSLPTLSSNTLPSTGTYHSSMPPPQSPRTTTSASRGKFVPGSPVLEAMAMVALSQSPSVFPSDRKKKKTSLRGPHSAPRVLIPHDSSIGTSSFSSLGSNITITSASATAADA-----ASHPYQTPNSITKKALHLVAAGRNNSPDRSNCNCKKSRCLKLYCECFRGGFTCGASCKCQNCANIPEFEAERIEAREKIEEKKKRKSGG--GRQSLGRGKEGLGNCLIAASPLVSAADVEKQQK-----------EHEQEALVPMPLSHSHATRHSTRFAGTP----ATSATLGAGGHIIFTLKQSLSSSPSSSSCLSTATMTPVQHRMGKRKNKGEEDAAAATVSVAL-SKPLRRTTPSKG-GRKDEFLLSVFGPRSKINKQNSLEVLSYLDGDDMADACLVSSLWNRLALETLDE 782
            MAA  Q+PS+E+ESEAAKALWEITNSPGL  KG SCLTPRGPA RD+ +GFPTPQG+G GSPS+NYNRFFSPSQFSWSPLPG SPA Q  + H+     S    SMPSF SS+  +++ T ++        +     V +A  S  L+  A G+  G  E     KKKAYSKKLDFA    EKAS VWLSLD+E+QRVAR GP AAPPASPA A  G   R+SHFFV++SPFK Q +  E F ASS G             +NG T  S + G+            G +   E   +   C  Q+D  +    + +E      +E Q+L A E++ +E + +  +G+   + LP  P PV  I MN+HGGSNWGGIQVRVKK  P H+L   + SLL+A+AAM+P  + +S  P +               +  MPPPQSPRTTT ASRG F PGSPVLEAMAMV LSQSPSVF SDRKK   S R   SAPRVL+P        S     S I   SA A A++      A   YQTP + +K +          +P   +C CKKSRCLKLYCECFRGGFTC  SCKCQNCAN+ E EAER EA +KI EKK+RKS G  GR   G   +G  N +  +   +   D++   K           E E+E       S S AT      A  P     T  T     ++IFT+K     SP +       T TPVQ R  KRKN G+      T  + +  KP R T   +G GRKDEFLLSVFGPRS++NKQNSLEVLSYLD DDMADA LVSSLWNRLALETLDE
Sbjct:    1 MAAARQSPSLEDESEAAKALWEITNSPGLAKKGSSCLTPRGPAGRDYLMGFPTPQGLGHGSPSVNYNRFFSPSQFSWSPLPGQSPALQSLSSHSYDCQSSQHPPSMPSFFSSMPQSSSITNLSEK------DTLNRHVQEATTSKVLHRDATGVTIGERET----KKKAYSKKLDFAGTCDEKASCVWLSLDSETQRVARGGPGAAPPASPAAALQGSIMRESHFFVSRSPFKQQAEDYEGFLASSAGRGAESINENDFACKNGRTASSKNRGTPIQSNLDKSKTNGDKCEIELGGHCKGCAEQEDGAISVSGQKQENKD---DEEQRLHAAEVLLNEATGIKLWGA--RQNLP-PPPPVKTIPMNKHGGSNWGGIQVRVKKKAPQHSL-SADPSLLEAIAAMIPSREASSSPPQT---------------NFGMPPPQSPRTTT-ASRGGFAPGSPVLEAMAMVTLSQSPSVFSSDRKKGNAS-RPCLSAPRVLMP--------STQEPFSGIQNFSAGAPASEPVRVLDAGMQYQTPTTGSKNS--YCERRSEGTPSSGSCCCKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEKKRRKSAGSAGRMQGGSSLDGEMNSVAGSPSSLRGLDLDSGVKIGSRPYVVRASEQEREFYEAAFSSTSLATELDAHMARRPRPSIGTGITSRGTSNVIFTVK-----SPDT-------TFTPVQRR-SKRKNVGD-----GTPDIPVPGKPARPTPKGRGTGRKDEFLLSVFGPRSRVNKQNSLEVLSYLDRDDMADASLVSSLWNRLALETLDE 766

The following BLAST results are available for this feature:

BLAST of NO09G01180.1 vs.

BLAST of NO09G01180.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27666.1	2.700e-154	48.43	Tesmin/TSO1-like cysteine-rich [Nannochloropsis ga...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO09G01180	NO09G01180	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO09G01180.1	NO09G01180.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO09G01180.1.cds1	NO09G01180.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G01180.1.cds2	NO09G01180.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G01180.1.cds3	NO09G01180.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G01180.1.cds4	NO09G01180.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr9:382761..387595+
coding sequence from alignment at chr9:382761..387595+

mRNA sequence

>NO09G01180.1 ID=NO09G01180.1|Name=NO09G01180.1|organism=Nannochloropsis oceanica|type=mRNA|length=4351bp
CACCACGCATCTTGATACTATCGGATTCCGCCTTTTCTTCTTTCTTCGGT
AAGTCGAACTCTAGTATATGGGCTCTCTTCTGTCCGCGAGATTCAAGGGA
TTAGATTAGGCTAGATCTTGGGATATGCCGTCAAAGTATTGATTTAATTT
CTTTTTAAATTAGGCTCTTTCTCTTTTTCCACTGGGTGCTCCTTAATTGT
AGTGACGCGAGCATCGCACACCCCACTAGCCGGTCCGTATCTATAGCAAG
AGAGCTACTTGGTTGAGGTACTGCAGGTGCTGCGACAAGGTTGGCCCTGC
TCCCAGTACTCATTTTGATTGCCTGGAAAAGTACTCTTTGCTCTTAAGGC
GGATACAACCATAATTTTGATATTTCCAGGGCATATCAATAAGCAGGACT
GGGCCACCTTTTTTTTTGGTTCTATTCCCCCCTCGTTTTCACAACCCCGC
CCCTATGCTCTCATTAGGTTATAACAATATCAACAATCTTTGCACCTGCT
CATCGCATCATTCGCTTTCATGCCAGCTTCGTTCAAACCAAAAGGCACAC
TTGCCCGAGTCCGCAGCATGGGCCACGAGGGCCAGGGCGATGGCTGCATG
CGATTTGTCCGTTACAAAGAGGCGCAGAAACAGCAACAATTGTTCCTCAT
CGGACAACAAAATGGTTTTTCCCGCCTTTTGCTGTTTTTCGACCCGCTAC
TACTGGTACATCAGCCCTGCCGGCATCATGAAGATCAGCTGGTTTCAAAG
GAATGAGACGTTGCTATACATGGTCATCTATATGTGCACACAAAAAATTT
GGTCGGCCGTGCTCCCCAGCCCCGAAAATCCCACCCCCAAAGAATGCCAG
CTACTTCCGCAACAACGCCTTCGACGCGGGAAAAGTAGGCGAGAAGGCTC
CGGTGGCTCTCCACCGCGCTGTGGTCACAAATCAATTCAAGACCAGAGGA
TGCCTCAAAAAGCCTCAATCATCATGTCGACAATGTGTGCAAGGTGTTAC
GGCGGTCCAAGTATTGCATGAGGGTACGCAAAGGGCATAGACAGAAAGTG
TATGGAGCGACCCACTTCTTTCAGTCCACTTCTGTTTCTTTCTCCTTTCT
CTTCCCATCATCACATCTGCGCCAGCCTCTCGTGTAAACGAGAGGAGGAA
GTGTCATGCTTGCTATGCGCCTTCATGGCGTGCACAAAGTTGTGAGCTTT
GGTCCAAACTCTCTCATACTCTCGCTTGTGGTCTCGGTTAGCCACCAGCT
GTATCAGCCATACCCTCGTCGGTGGACTTCTACGCGACGAACGACCACCT
CCTTTGACTTCTTGCTCTCGTTGTCCGATCTCCCATTCTTCCTTGGTCAC
GCGTCCTTTTTACACTTCTACACTTGCATGGGAACCAGGAACAGGCGTAC
ACAGTCGTCCTTTACGCGGCCATCATGGCGGCCACGAATCAGGCGCCCTC
GATAGAGGAGGAATCGGAAGCGGCCAAAGCGCTGTGGGAAATCACCAACT
CGCCGGGACTGACGAATAAAGGGCCCTCCTGCCTCACTCCCCGAGGCCCC
GCCTGCCGGGACCACCCCCTGGGCTTCCCAACGCCGCAGGGCGTGGGACA
AGGTAGCCCCTCGATGAACTACAACAGATTCTTCAGTCCCAGCCAATTCT
CTTGGTCCCCCCTGCCCGGTCACTCACCCGCCCCGCAACCCAACGCCGTC
CATGCCTCCCACGGGAGCCACTCCTCGTCGTCCATGCCTAGTTTCCTTTC
CTCCCTCGCCTCCACCACCACCTGCACTGAAATCGCCCATTCTGGCATGG
GTACGGGCGCTGAAGAAGGCGCGGCAGCAGTAGACAAAGCAGCAGCGTCT
GCCGCTCTGTACGCTGCGGCGGGAATAGGAGGAGGGGGTGGGGAGGCAGG
TGGCGTGATCAAGAAGAAGGCTTATAGTAAGAAACTTGACTTCGCCGTGC
CTTCGAGTGAGAAGGCATCGCGTGTGTGGTTGTCCCTGGACACCGAGTCG
CAGCGCGTGGCGCGAACAGGACCCAGGGCGGCGCCTCCTGCTAGCCCTGC
TGTGGCTGGTGGTGGGAGGGATTCACATTTTTTTGTGACGCAATCGCCCT
TCAAATACCAAGGAGATGGGCTGGAAGACTTCTTCGCGTCTTCGACGGGT
GTCAGCAACAGCGAGAACGGTAGCACCGGCGACAGCGACAGCAGTGGTAG
TGGCAGCAGGAGGGGGGGCAGGCCTGGAGGGGAAACGACGGTGAATGTGT
CGCTATGCGAGGCACAGAAAGACGTGGTCGTCGACCACCAACAGAAGTGG
GAGGAAGAGTCTGGCGGAGGGCGGGAAGAAGGGCAGCAGCTGCAGGCTGT
AGAGCTCGTGACGGATGAGACGAGTAGGCTGTCATATTATGGCTCCGGGG
ACTCTCGGGGCTTGCCCTTTACACCTTTGCCCGTCAATGCAATCGCCATG
AATCAGCACGGCGGCTCTAACTGGGGCGGCATCCAAGTCCGTGTCAAGAA
AACCACACCCAGCCACACCCTTCATCACAACAATACATCACTCCTTGACG
CCCTCGCCGCTATGGTGCCTCTCCATGACGACGCCTCGCACAGCCCCTCC
TCCCTCCCCACGCTCTCCTCCAACACTCTCCCCTCCACTGGTACTTACCA
CAGTAGCATGCCCCCCCCTCAAAGTCCACGGACGACGACGTCTGCTTCCC
GAGGGAAATTTGTGCCGGGCTCTCCCGTGTTAGAGGCCATGGCAATGGTC
GCCTTGTCCCAGTCCCCCTCTGTCTTCCCCTCCGATCGCAAGAAGAAAAA
GACCTCCTTGCGTGGCCCTCACAGCGCGCCCCGCGTGCTCATTCCTCATG
ATTCCTCTATCGGAACCTCTTCCTTCTCCTCCTTGGGCTCCAATATCACC
ATCACCAGTGCCAGTGCTACTGCTGCTGATGCTGCGAGCCACCCCTACCA
AACCCCAAACTCAATCACTAAGAAAGCCCTTCATCTCGTCGCCGCCGGCA
GGAATAACAGCCCTGATCGCAGCAACTGCAATTGCAAGAAATCTCGTTGC
CTCAAATTGTATTGCGAGTGCTTCCGGGGGGGGTTCACGTGCGGTGCTTC
GTGCAAGTGTCAGAATTGTGCGAACATTCCTGAATTTGAAGCGGAACGGA
TCGAAGCCCGCGAGAAGATTGAGGAAAAGAAGAAAAGGAAGAGCGGAGGA
GGGCGTCAGAGTCTGGGAAGGGGGAAAGAGGGGTTGGGGAACTGTTTGAT
AGCTGCCTCGCCTCTTGTGTCAGCGGCAGATGTGGAGAAACAGCAGAAGG
AGCATGAGCAGGAGGCCTTGGTGCCCATGCCGTTGTCGCACTCGCACGCC
ACGCGCCACTCGACGCGCTTTGCGGGTACTCCTGCCACCAGCGCCACACT
GGGGGCAGGAGGCCACATAATCTTTACCCTAAAGCAGTCCCTCTCCTCCT
CCCCTTCCTCCTCTTCCTGCTTATCGACCGCAACGATGACACCCGTGCAG
CATCGCATGGGTAAGCGCAAGAACAAGGGAGAGGAGGACGCAGCTGCTGC
CACTGTTTCTGTCGCCTTGTCAAAGCCCCTGCGACGTACCACGCCGAGCA
AAGGAGGGAGAAAGGATGAGTTCTTGTTGTCTGTATTTGGGCCTCGTTCG
AAAATTAACAAGCAGAATTCTCTTGAGGTGCTTTCGTACCTCGATGGGGA
TGACATGGCTGATGCGTGTCTGGTGTCTTCACTTTGGAATCGCCTAGCTC
TTGAGACGCTGGATGAGTAGAGGCGTTGAGAGGGGAAGAAAGCAAGAAAT
CAACAGACAGAAAGAGCCTTTGTGCAATAAACAGAATTGGGTACAGGCAA
AAACAGCACAACGAAAAATGTGTGATGTATAATAATTATTATTATTTTTA
TTCACATGCAGTGAAGAGAAATGCGAGTACCATCAGCAGTAGCAAGAGCA
TCGTCTTCAGTGTAAAATCATCACGTAGCACAGTCAATCAAAATCATATA
GTCATTTAGTCGCTACCATAACCCCACCCACTCATCCTCATCGTGTAAAT
GCAGAACGTTTGCGATGCCGCAGCGGTAGTGGCAGCAACACTGGGTCGAT
TCGAGCAATAAAAAGAGACAATAGTGAGATATAGCCAGATCATTAGTCAT
AGAGGGCGTTGCATCCCTTCTATCATGCACACCCGCCATTCAAAAAGATA
GTAGGCAGTCATTAAGCCAATCAAACCATATTAGTCTTTCCGTCCACCCA
ACCTTTCATCCATGTACGAACGAGAATATACCCAGGCCAGAAAATGTGTG
CTTTCGATATTGAGACCAACAAGAAAAGAATTTAGCTGGTATTTATATGA
A

protein sequence of NO09G01180.1

>NO09G01180.1-protein ID=NO09G01180.1-protein|Name=NO09G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=782bp
MAATNQAPSIEEESEAAKALWEITNSPGLTNKGPSCLTPRGPACRDHPLG
FPTPQGVGQGSPSMNYNRFFSPSQFSWSPLPGHSPAPQPNAVHASHGSHS
SSSMPSFLSSLASTTTCTEIAHSGMGTGAEEGAAAVDKAAASAALYAAAG
IGGGGGEAGGVIKKKAYSKKLDFAVPSSEKASRVWLSLDTESQRVARTGP
RAAPPASPAVAGGGRDSHFFVTQSPFKYQGDGLEDFFASSTGVSNSENGS
TGDSDSSGSGSRRGGRPGGETTVNVSLCEAQKDVVVDHQQKWEEESGGGR
EEGQQLQAVELVTDETSRLSYYGSGDSRGLPFTPLPVNAIAMNQHGGSNW
GGIQVRVKKTTPSHTLHHNNTSLLDALAAMVPLHDDASHSPSSLPTLSSN
TLPSTGTYHSSMPPPQSPRTTTSASRGKFVPGSPVLEAMAMVALSQSPSV
FPSDRKKKKTSLRGPHSAPRVLIPHDSSIGTSSFSSLGSNITITSASATA
ADAASHPYQTPNSITKKALHLVAAGRNNSPDRSNCNCKKSRCLKLYCECF
RGGFTCGASCKCQNCANIPEFEAERIEAREKIEEKKKRKSGGGRQSLGRG
KEGLGNCLIAASPLVSAADVEKQQKEHEQEALVPMPLSHSHATRHSTRFA
GTPATSATLGAGGHIIFTLKQSLSSSPSSSSCLSTATMTPVQHRMGKRKN
KGEEDAAAATVSVALSKPLRRTTPSKGGRKDEFLLSVFGPRSKINKQNSL
EVLSYLDGDDMADACLVSSLWNRLALETLDE*

mRNA from alignment at chr9:382761..387595+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO09G01180.1 ID=NO09G01180.1|Name=NO09G01180.1|organism=Nannochloropsis oceanica|type=mRNA|length=4835bp|location=Sequence derived from alignment at chr9:382761..387595+ (Nannochloropsis oceanica)
CACCACGCATCTTGATACTATCGGATTCCGCCTTTTCTTCTTTCTTCGGT
AAGTCGAACTCTAGTATATGGGCTCTCTTCTGTCCGCGAGATTCAAGGGA
TTAGATTAGGCTAGATCTTGGGATATGCCGTCAAAGTATTGATTTAATTT
CTTTTTAAATTAGGCTCTTTCTCTTTTTCCACTGGGTGCTCCTTAATTGT
AGTGACGCGAGCATCGCACACCCCACTAGCCGGTCCGTATCTATAGCAAG
AGAGCTACTTGGTTGAGGTACTGCAGGTGCTGCGACAAGGTTGGCCCTGC
TCCCAGTACTCATTTTGATTGCCTGGAAAAGTACTCTTTGCTCTTAAGGC
GGATACAACCATAATTTTGATATTTCCAGGGCATATCAATAAGCAGGACT
GGGCCACCTTTTTTTTTGGTTCTATTCCCCCCTCGTTTTCACAACCCCGC
CCCTATGCTCTCATTAGGTTATAACAATATCAACAATCTTTGCACCTGCT
CATCGCATCATTCGCTTTCATGCCAGCTTCGTTCAAACCAAAAGGCACAC
TTGCCCGAGTCCGCAGCATGGGCCACGAGGGCCAGGGCGATGGCTGCATG
CGATTTGTCCGTTACAAAGAGGCGCAGAAACAGCAACAATTGTTCCTCAT
CGGACAACAAAATGGTTTTTCCCGCCTTTTGCTGTTTTTCGACCCGCTAC
TACTGGTACATCAGCCCTGCCGGCATCATGAAGATCAGCTGGTTTCAAAG
GAATGAGACGTTGCTATACATGGTCATCTATATGTGCACACAAAAAATTT
GGTCGGCCGTGCTCCCCAGCCCCGAAAATCCCACCCCCAAAGAATGCCAG
CTACTTCCGCAACAACGCCTTCGACGCGGGAAAAGTAGGCGAGAAGGCTC
CGGTGGCTCTCCACCGCGCTGTGGTCACAAATCAATTCAAGACCAGAGGA
TGCCTCAAAAAGCCTCAATCATCATGTCGACAATGTGTGCAAGGTGTTAC
GGCGGTCCAAGTATTGCATGAGGGTACGCAAAGGGCATAGACAGAAAGTG
TATGGAGCGACCCACTTCTTTCAGTCCACTTCTGTTTCTTTCTCCTTTCT
CTTCCCATCATCACATCTGCGCCAGCCTCTCGTGTAAACGAGAGGAGGAA
GTGTCATGCTTGCTATGCGCCTTCATGGCGTGCACAAAGTTGTGAGCTTT
GGTCCAAACTCTCTCATACTCTCGCTTGTGGTCTCGGTTAGCCACCAGCT
GTATCAGCCATACCCTCGTCGGTGGACTTCTACGCGACGAACGACCACCT
CCTTTGACTTCTTGCTCTCGTTGTCCGATCTCCCATTCTTCCTTGGTCAC
GCGTCCTTTTTACACTTCTACACTTGCATGGGAACCAGGAACAGGCGTAC
ACAGTCGTCCTTTACGCGGCCATCATGGCGGCCACGAATCAGGCGCCCTC
GATAGAGGAGGAATCGGAAGCGGGTAAGTGCGGCAAATCCTCAGGCACTA
AAGTGTTCTTTTGTCACATTCGAATGCTGATATAAGACACCACCGCACAT
ATCCCTGCTTGTCTGCCTCTTTTTTATTTCCTGTCCCGTCTCACATCCCC
CTATCCCCCATACACGACAGCCAAAGCGCTGTGGGAAATCACCAACTCGC
CGGGACTGACGAATAAAGGGCCCTCCTGCCTCACTCCCCGAGGCCCCGCC
TGCCGGGACCACCCCCTGGGCTTCCCAACGCCGCAGGGCGTGGGACAAGG
TAGCCCCTCGATGAACTACAACAGGTGCGCATCCGTTGTCTGGTCTGGAA
GAGTGCACGTTTCGTTTGTGTGCGGGATGTGCGTGTTTGAATTTTGAACG
GCCTCGTTGCCCCCCACCCGGTGTTGGTCAGCCACATCTGTAGTCCGTAT
GTTCTTGTACGAAAGCACCTTTCAGCTTAATTTGCTACTCTGTCTCTCTG
CCTATACATCTCCCTCCTTCCCCTTCCTCCTTGTTCCTCTCCGTCCCCGC
TCAGATTCTTCAGTCCCAGCCAATTCTCTTGGTCCCCCCTGCCCGGTCAC
TCACCCGCCCCGCAACCCAACGCCGTCCATGCCTCCCACGGGAGCCACTC
CTCGTCGTCCATGCCTAGTTTCCTTTCCTCCCTCGCCTCCACCACCACCT
GCACTGAAATCGCCCATTCTGGCATGGGTACGGGCGCTGAAGAAGGCGCG
GCAGCAGTAGACAAAGCAGCAGCGTCTGCCGCTCTGTACGCTGCGGCGGG
AATAGGAGGAGGGGGTGGGGAGGCAGGTGGCGTGATCAAGAAGAAGGCTT
ATAGTAAGAAACTTGACTTCGCCGTGCCTTCGAGTGAGAAGGCATCGCGT
GTGTGGTTGTCCCTGGACACCGAGTCGCAGCGCGTGGCGCGAACAGGACC
CAGGGCGGCGCCTCCTGCTAGCCCTGCTGTGGCTGGTGGTGGGAGGGATT
CACATTTTTTTGTGACGCAATCGCCCTTCAAATACCAAGGAGATGGGCTG
GAAGACTTCTTCGCGTCTTCGACGGGTGTCAGCAACAGCGAGAACGGTAG
CACCGGCGACAGCGACAGCAGTGGTAGTGGCAGCAGGAGGGGGGGCAGGC
CTGGAGGGGAAACGACGGTGAATGTGTCGCTATGCGAGGCACAGAAAGAC
GTGGTCGTCGACCACCAACAGAAGTGGGAGGAAGAGTCTGGCGGAGGGCG
GGAAGAAGGGCAGCAGCTGCAGGCTGTAGAGCTCGTGACGGATGAGACGA
GTAGGCTGTCATATTATGGCTCCGGGGACTCTCGGGGCTTGCCCTTTACA
CCTTTGCCCGTCAATGCAATCGCCATGAATCAGCACGGTAAGGATAGCCG
AAGGGGTGGGGGGAATAGAGCAAAGAGTCTCCTTCTTATACAAACACGAG
CTTATCCCCTCTCTTCCTTCCAACCCTCACTCCTCCGACTCCAGGCGGCT
CTAACTGGGGCGGCATCCAAGTCCGTGTCAAGAAAACCACACCCAGCCAC
ACCCTTCATCACAACAATACATCACTCCTTGACGCCCTCGCCGCTATGGT
GCCTCTCCATGACGACGCCTCGCACAGCCCCTCCTCCCTCCCCACGCTCT
CCTCCAACACTCTCCCCTCCACTGGTACTTACCACAGTAGCATGCCCCCC
CCTCAAAGTCCACGGACGACGACGTCTGCTTCCCGAGGGAAATTTGTGCC
GGGCTCTCCCGTGTTAGAGGCCATGGCAATGGTCGCCTTGTCCCAGTCCC
CCTCTGTCTTCCCCTCCGATCGCAAGAAGAAAAAGACCTCCTTGCGTGGC
CCTCACAGCGCGCCCCGCGTGCTCATTCCTCATGATTCCTCTATCGGAAC
CTCTTCCTTCTCCTCCTTGGGCTCCAATATCACCATCACCAGTGCCAGTG
CTACTGCTGCTGATGCTGCGAGCCACCCCTACCAAACCCCAAACTCAATC
ACTAAGAAAGCCCTTCATCTCGTCGCCGCCGGCAGGAATAACAGCCCTGA
TCGCAGCAACTGCAATTGCAAGAAATCTCGTTGCCTCAAATTGTATTGCG
AGTGCTTCCGGGGGGGGTTCACGTGCGGTGCTTCGTGCAAGTGTCAGAAT
TGTGCGAACATTCCTGAATTTGAAGCGGAACGGATCGAAGCCCGCGAGAA
GATTGAGGAAAAGAAGAAAAGGAAGAGCGGAGGAGGGCGTCAGAGTCTGG
GAAGGGGGAAAGAGGGGTTGGGGAACTGTTTGATAGCTGCCTCGCCTCTT
GTGTCAGCGGCAGATGTGGAGAAACAGCAGAAGGAGCATGAGCAGGAGGC
CTTGGTGCCCATGCCGTTGTCGCACTCGCACGCCACGCGCCACTCGACGC
GCTTTGCGGGTACTCCTGCCACCAGCGCCACACTGGGGGCAGGAGGCCAC
ATAATCTTTACCCTAAAGCAGTCCCTCTCCTCCTCCCCTTCCTCCTCTTC
CTGCTTATCGACCGCAACGATGACACCCGTGCAGCATCGCATGGGTAAGC
GCAAGAACAAGGGAGAGGAGGACGCAGCTGCTGCCACTGTTTCTGTCGCC
TTGTCAAAGCCCCTGCGACGTACCACGCCGAGCAAAGGAGGGAGAAAGGA
TGAGTTCTTGTTGTCTGTATTTGGGCCTCGTTCGAAAATTAACAAGCAGA
ATTCTCTTGAGGTGCTTTCGTACCTCGATGGGGATGACATGGCTGATGCG
TGTCTGGTGTCTTCACTTTGGAATCGCCTAGCTCTTGAGACGCTGGATGA
GTAGAGGCGTTGAGAGGGGAAGAAAGCAAGAAATCAACAGACAGAAAGAG
CCTTTGTGCAATAAACAGAATTGGGTACAGGCAAAAACAGCACAACGAAA
AATGTGTGATGTATAATAATTATTATTATTTTTATTCACATGCAGTGAAG
AGAAATGCGAGTACCATCAGCAGTAGCAAGAGCATCGTCTTCAGTGTAAA
ATCATCACGTAGCACAGTCAATCAAAATCATATAGTCATTTAGTCGCTAC
CATAACCCCACCCACTCATCCTCATCGTGTAAATGCAGAACGTTTGCGAT
GCCGCAGCGGTAGTGGCAGCAACACTGGGTCGATTCGAGCAATAAAAAGA
GACAATAGTGAGATATAGCCAGATCATTAGTCATAGAGGGCGTTGCATCC
CTTCTATCATGCACACCCGCCATTCAAAAAGATAGTAGGCAGTCATTAAG
CCAATCAAACCATATTAGTCTTTCCGTCCACCCAACCTTTCATCCATGTA
CGAACGAGAATATACCCAGGCCAGAAAATGTGTGCTTTCGATATTGAGAC
CAACAAGAAAAGAATTTAGCTGGTATTTATATGAA

Coding sequence (CDS) from alignment at chr9:382761..387595+

>NO09G01180.1 ID=NO09G01180.1|Name=NO09G01180.1|organism=Nannochloropsis oceanica|type=CDS|length=2346bp|location=Sequence derived from alignment at chr9:382761..387595+ (Nannochloropsis oceanica)
ATGGCGGCCACGAATCAGGCGCCCTCGATAGAGGAGGAATCGGAAGCGGC
CAAAGCGCTGTGGGAAATCACCAACTCGCCGGGACTGACGAATAAAGGGC
CCTCCTGCCTCACTCCCCGAGGCCCCGCCTGCCGGGACCACCCCCTGGGC
TTCCCAACGCCGCAGGGCGTGGGACAAGGTAGCCCCTCGATGAACTACAA
CAGATTCTTCAGTCCCAGCCAATTCTCTTGGTCCCCCCTGCCCGGTCACT
CACCCGCCCCGCAACCCAACGCCGTCCATGCCTCCCACGGGAGCCACTCC
TCGTCGTCCATGCCTAGTTTCCTTTCCTCCCTCGCCTCCACCACCACCTG
CACTGAAATCGCCCATTCTGGCATGGGTACGGGCGCTGAAGAAGGCGCGG
CAGCAGTAGACAAAGCAGCAGCGTCTGCCGCTCTGTACGCTGCGGCGGGA
ATAGGAGGAGGGGGTGGGGAGGCAGGTGGCGTGATCAAGAAGAAGGCTTA
TAGTAAGAAACTTGACTTCGCCGTGCCTTCGAGTGAGAAGGCATCGCGTG
TGTGGTTGTCCCTGGACACCGAGTCGCAGCGCGTGGCGCGAACAGGACCC
AGGGCGGCGCCTCCTGCTAGCCCTGCTGTGGCTGGTGGTGGGAGGGATTC
ACATTTTTTTGTGACGCAATCGCCCTTCAAATACCAAGGAGATGGGCTGG
AAGACTTCTTCGCGTCTTCGACGGGTGTCAGCAACAGCGAGAACGGTAGC
ACCGGCGACAGCGACAGCAGTGGTAGTGGCAGCAGGAGGGGGGGCAGGCC
TGGAGGGGAAACGACGGTGAATGTGTCGCTATGCGAGGCACAGAAAGACG
TGGTCGTCGACCACCAACAGAAGTGGGAGGAAGAGTCTGGCGGAGGGCGG
GAAGAAGGGCAGCAGCTGCAGGCTGTAGAGCTCGTGACGGATGAGACGAG
TAGGCTGTCATATTATGGCTCCGGGGACTCTCGGGGCTTGCCCTTTACAC
CTTTGCCCGTCAATGCAATCGCCATGAATCAGCACGGCGGCTCTAACTGG
GGCGGCATCCAAGTCCGTGTCAAGAAAACCACACCCAGCCACACCCTTCA
TCACAACAATACATCACTCCTTGACGCCCTCGCCGCTATGGTGCCTCTCC
ATGACGACGCCTCGCACAGCCCCTCCTCCCTCCCCACGCTCTCCTCCAAC
ACTCTCCCCTCCACTGGTACTTACCACAGTAGCATGCCCCCCCCTCAAAG
TCCACGGACGACGACGTCTGCTTCCCGAGGGAAATTTGTGCCGGGCTCTC
CCGTGTTAGAGGCCATGGCAATGGTCGCCTTGTCCCAGTCCCCCTCTGTC
TTCCCCTCCGATCGCAAGAAGAAAAAGACCTCCTTGCGTGGCCCTCACAG
CGCGCCCCGCGTGCTCATTCCTCATGATTCCTCTATCGGAACCTCTTCCT
TCTCCTCCTTGGGCTCCAATATCACCATCACCAGTGCCAGTGCTACTGCT
GCTGATGCTGCGAGCCACCCCTACCAAACCCCAAACTCAATCACTAAGAA
AGCCCTTCATCTCGTCGCCGCCGGCAGGAATAACAGCCCTGATCGCAGCA
ACTGCAATTGCAAGAAATCTCGTTGCCTCAAATTGTATTGCGAGTGCTTC
CGGGGGGGGTTCACGTGCGGTGCTTCGTGCAAGTGTCAGAATTGTGCGAA
CATTCCTGAATTTGAAGCGGAACGGATCGAAGCCCGCGAGAAGATTGAGG
AAAAGAAGAAAAGGAAGAGCGGAGGAGGGCGTCAGAGTCTGGGAAGGGGG
AAAGAGGGGTTGGGGAACTGTTTGATAGCTGCCTCGCCTCTTGTGTCAGC
GGCAGATGTGGAGAAACAGCAGAAGGAGCATGAGCAGGAGGCCTTGGTGC
CCATGCCGTTGTCGCACTCGCACGCCACGCGCCACTCGACGCGCTTTGCG
GGTACTCCTGCCACCAGCGCCACACTGGGGGCAGGAGGCCACATAATCTT
TACCCTAAAGCAGTCCCTCTCCTCCTCCCCTTCCTCCTCTTCCTGCTTAT
CGACCGCAACGATGACACCCGTGCAGCATCGCATGGGTAAGCGCAAGAAC
AAGGGAGAGGAGGACGCAGCTGCTGCCACTGTTTCTGTCGCCTTGTCAAA
GCCCCTGCGACGTACCACGCCGAGCAAAGGAGGGAGAAAGGATGAGTTCT
TGTTGTCTGTATTTGGGCCTCGTTCGAAAATTAACAAGCAGAATTCTCTT
GAGGTGCTTTCGTACCTCGATGGGGATGACATGGCTGATGCGTGTCTGGT
GTCTTCACTTTGGAATCGCCTAGCTCTTGAGACGCTGGATGAGTAG

Synonyms

Publications