NO09G01090, NO09G01090 (gene) Nannochloropsis oceanica

Overview
NameNO09G01090
Unique NameNO09G01090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length735
Alignment locationchr9:356718..357452 -

Link to JBrowse

Properties
Property NameValue
DescriptionMyo-inositol 2-dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:356718..357452 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR004104OxRdtase_C
IPR000683Oxidoreductase_N
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of NO09G01090 vs. NCBI_GenBank
Match: WP_019944399.1 (inositol 2-dehydrogenase [Dyadobacter beijingensis])

HSP 1 Score: 214.5 bits (545), Expect = 3.600e-52
Identity = 105/215 (48.84%), Postives = 138/215 (64.19%), Query Frame = 0 
Query:   33 LGVGVVGCGRIGQIHGNTLAFHTPGARLVAITD---PFEEMGKKLIGQTGGMPTYHKDYFELLDRDDVHAVVVASPTPCHVEQIMSAVERGKHDFCEKPISNDLSAIDACTQAAAKAGTKLILGFQRRFDINFQNVKKQITQGAIGEMRTFRIVSRDQAPPPAEYLKTSGGIFLDMSSHDFDMARFLVGSEIEEIYVKGASWV-PEAKAAGDLDT 244
            L  GV+G GRIGQIH + L  H P A ++  +D      E  + L     G+P    D +++++  DV AV++ SPTP HV   ++A E+GKH FCEKP+   L AI A  +A +    KL+LGF RRFD NF NV+  +    IGE    RI SRD APPP EYLK SGGIFLDMS HDFDMAR++VGSE++E++VKG + + PE +  GD+DT
Sbjct:    5 LKTGVIGLGRIGQIHLSNLVHHMPDAEVIIASDLSPAAHEFARNL-----GVPEVVTDAYDVINHPDVEAVIICSPTPFHVPYTVAAAEKGKHVFCEKPLDVTLEAIQAAEKAVSDNNVKLMLGFNRRFDANFSNVRHLVADNKIGEPHILRITSRDPAPPPVEYLKVSGGIFLDMSIHDFDMARYIVGSEVKEVFVKGDALIHPEIREFGDIDT 214
[Close]
BLAST of NO09G01090 vs. NCBI_GenBank
Match: OJV15496.1 (inositol 2-dehydrogenase [Dyadobacter sp. 50-39])

HSP 1 Score: 213.8 bits (543), Expect = 6.100e-52
Identity = 104/212 (49.06%), Postives = 135/212 (63.68%), Query Frame = 0 
Query:   33 LGVGVVGCGRIGQIHGNTLAFHTPGARLVAITDPFEEMGKKLIGQTGGMPTYHKDYFELLDRDDVHAVVVASPTPCHVEQIMSAVERGKHDFCEKPISNDLSAIDACTQAAAKAGTKLILGFQRRFDINFQNVKKQITQGAIGEMRTFRIVSRDQAPPPAEYLKTSGGIFLDMSSHDFDMARFLVGSEIEEIYVKGASWV-PEAKAAGDLDT 244
            L  GV+G GRIGQIH   L  H P A ++  +D           +  G+P    D +++++  DV AV++ SPTP HV   ++A E+GKH FCEKP+   L AI A  +A A    KL+LGF RRFD NF NV+  +    IGE    RI SRD APPP EYLK SGGIFLDMS HDFDMAR++VGSE++E++VKG + + PE +  GD+DT
Sbjct:    5 LKTGVIGLGRIGQIHLTNLVHHMPDAEVIIASD--LSPAAHAFARDLGVPEVVTDAYDVINHPDVEAVIICSPTPFHVPYTVAAAEKGKHVFCEKPLDVTLEAIQAAEKAVADNNVKLMLGFNRRFDANFNNVRHLVAADKIGEPHILRITSRDPAPPPVEYLKVSGGIFLDMSIHDFDMARYIVGSEVKEVFVKGDALIHPEIREFGDIDT 214
[Close]
BLAST of NO09G01090 vs. NCBI_GenBank
Match: PJF48834.1 (inositol 2-dehydrogenase [Chloroflexi bacterium])

HSP 1 Score: 213.8 bits (543), Expect = 6.100e-52
Identity = 107/213 (50.23%), Postives = 135/213 (63.38%), Query Frame = 0 
Query:   32 PLGVGVVGCGRIGQIHGNTLAFHTPGARLVAITDPFEEMGKKLIGQTGGMPTYHKDYFELLDRDDVHAVVVASPTPCHVEQIMSAVERGKHDFCEKPISNDLSAIDACTQAAAKAGTKLILGFQRRFDINFQNVKKQITQGAIGEMRTFRIVSRDQAPPPAEYLKTSGGIFLDMSSHDFDMARFLVGSEIEEIYVKGASWV-PEAKAAGDLDT 244
            PL +G++G GRIGQ+H  T+      A LVA+ D   E   +      G+P    D   L++   +HAV++ S T  H   I +A + GKH FCEKPI+ DL+AID    A  KAG KL +GF RRFD NFQ +++ +  G IGE  T  IVSRD APPP EY+K SGG+FLDM+ HDFDMARFL+GSEIEE+   GA  V P   AAGD+DT
Sbjct:    4 PLRIGLIGAGRIGQVHAETITRRVKDATLVAVAD-VNEFAVRACATQNGIPHATCDPSALINDPSIHAVLICSSTDTHAVLIEAAAQAGKHIFCEKPIALDLAAIDRALCAVEKAGVKLQIGFNRRFDANFQRIRRAVESGEIGEPHTLHIVSRDPAPPPIEYVKVSGGLFLDMAIHDFDMARFLIGSEIEEVCALGAVRVDPAIGAAGDVDT 215
[Close]
BLAST of NO09G01090 vs. NCBI_GenBank
Match: WP_106597967.1 (inositol 2-dehydrogenase [Dyadobacter jiangsuensis] >PSL24620.1 myo-inositol 2-dehydrogenase [Dyadobacter jiangsuensis])

HSP 1 Score: 213.4 bits (542), Expect = 8.000e-52
Identity = 104/212 (49.06%), Postives = 136/212 (64.15%), Query Frame = 0 
Query:   33 LGVGVVGCGRIGQIHGNTLAFHTPGARLVAITDPFEEMGKKLIGQTGGMPTYHKDYFELLDRDDVHAVVVASPTPCHVEQIMSAVERGKHDFCEKPISNDLSAIDACTQAAAKAGTKLILGFQRRFDINFQNVKKQITQGAIGEMRTFRIVSRDQAPPPAEYLKTSGGIFLDMSSHDFDMARFLVGSEIEEIYVKGASWV-PEAKAAGDLDT 244
            L  GV+G GRIGQIH + L  H P A ++  +D           +  G+P    D +++++  DV AV++ SPTP HV   ++A E+GKH FCEKP+   L AI A  +A +    KL+LGF RRFD NF NV+  +    IGE    RI SRD APPP EYLK SGGIFLDMS HDFDMAR++VGSE++E++VKG + + PE K  GD+DT
Sbjct:    5 LKTGVIGLGRIGQIHLSNLVHHMPDAEVIIASD--LSPTAHAFARDLGVPEVVTDAYDVINHPDVEAVIICSPTPFHVPYTVAAAEKGKHVFCEKPLDVTLEAIQAAEKAVSDNNVKLMLGFNRRFDANFMNVRHLVANEKIGEPHILRITSRDPAPPPVEYLKVSGGIFLDMSIHDFDMARYIVGSEVKEVFVKGDALIHPEIKEFGDIDT 214
[Close]
BLAST of NO09G01090 vs. NCBI_GenBank
Match: WP_090148774.1 (inositol 2-dehydrogenase [Dyadobacter soli] >SDE50615.1 myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [Dyadobacter soli])

HSP 1 Score: 212.6 bits (540), Expect = 1.400e-51
Identity = 104/212 (49.06%), Postives = 135/212 (63.68%), Query Frame = 0 
Query:   33 LGVGVVGCGRIGQIHGNTLAFHTPGARLVAITDPFEEMGKKLIGQTGGMPTYHKDYFELLDRDDVHAVVVASPTPCHVEQIMSAVERGKHDFCEKPISNDLSAIDACTQAAAKAGTKLILGFQRRFDINFQNVKKQITQGAIGEMRTFRIVSRDQAPPPAEYLKTSGGIFLDMSSHDFDMARFLVGSEIEEIYVKGASWV-PEAKAAGDLDT 244
            L  GV+G GRIGQIH   L  H P A ++  +D           +  G+P    D +++++  DV AV++ SPTP HV   ++A E+GKH FCEKP+   L AI A  +A +    KL+LGF RRFD NF NV+  +    IGE    RI SRD APPP EYLK SGGIFLDMS HDFDMAR++VGSE++E++VKG + + PE K  GD+DT
Sbjct:    5 LKTGVIGLGRIGQIHLANLVHHMPDAEVIIASD--LSPAAHAFARDLGVPEVVTDAYDVINHPDVEAVIICSPTPFHVPYTVAAAEKGKHIFCEKPLDVTLEAIQAAEKAVSDNNVKLMLGFNRRFDANFMNVRHLVVNEKIGEPHILRITSRDPAPPPVEYLKVSGGIFLDMSIHDFDMARYIVGSEVKEVFVKGDALIHPEIKDFGDIDT 214
[Close]
BLAST of NO09G01090 vs. NCBI_GenBank
Match: WP_105498717.1 (inositol 2-dehydrogenase [Candidatus Sulfopaludibacter sp. SbA3] >SPE35636.1 Uncharacterized oxidoreductase YrbE [Candidatus Sulfopaludibacter sp. SbA3])

HSP 1 Score: 212.2 bits (539), Expect = 1.800e-51
Identity = 106/217 (48.85%), Postives = 140/217 (64.52%), Query Frame = 0 
Query:   28 MSRTPLGVGVVGCGRIGQIHGNTLAFHTPGARLVAITDPFEEMGKKLIGQTGGMPTYHKDYFELLDRDDVHAVVVASPTPCHVEQIMSAVERGKHDFCEKPISNDLSAIDACTQAAAKAGTKLILGFQRRFDINFQNVKKQITQGAIGEMRTFRIVSRDQAPPPAEYLKTSGGIFLDMSSHDFDMARFLVGSEIEEIYVKGASWV-PEAKAAGDLDT 244
            M+   L +G++G GRIG++H  T+AF  P A++V+ITD   +     + +  G+P+      E+L    V AV++ S T  H E I  A   GKH FCEKPI+++L+ IDA  +A  +AG KL +GF RRFD NF  VK+ +  G IG  R   I+SRD APPP  Y+K SGG+FLDM+ HDFDMARFL+G E+EEI+V G   V PE  AAGDLDT
Sbjct:    1 MTPNRLHIGIIGAGRIGKVHAETVAFGLPEAQIVSITDINRDAAID-VAKRCGIPSVAATSEEILADRGVDAVLICSSTDTHAELIGEAARAGKHIFCEKPIAHNLAMIDAALEAVDRAGVKLQIGFNRRFDANFARVKRAVETGEIGTPRLMHIISRDPAPPPLSYIKVSGGMFLDMTIHDFDMARFLIGDEVEEIFVAGGVMVDPEIGAAGDLDT 216
[Close]
BLAST of NO09G01090 vs. NCBI_GenBank
Match: PKO01347.1 (inositol 2-dehydrogenase [Chloroflexi bacterium HGW-Chloroflexi-4])

HSP 1 Score: 211.8 bits (538), Expect = 2.300e-51
Identity = 102/210 (48.57%), Postives = 134/210 (63.81%), Query Frame = 0 
Query:   35 VGVVGCGRIGQIHGNTLAFHTPGARLVAITDPFEEMGKKLIGQTGGMPTYHKDYFELLDRDDVHAVVVASPTPCHVEQIMSAVERGKHDFCEKPISNDLSAIDACTQAAAKAGTKLILGFQRRFDINFQNVKKQITQGAIGEMRTFRIVSRDQAPPPAEYLKTSGGIFLDMSSHDFDMARFLVGSEIEEIYVKGASWV-PEAKAAGDLDT 244
            VGV+G GRIG+IH   LA   PG  +VAI DP     K+L  +   + +Y +DY ++LD   + AV++ S T  H   +  A E GKH FCEKP+ + L  IDA   A  KAG K  +GF RRFD NF+ V++ + +G +GE++  RI SRD APPP  Y+K SGG+FLDM+ HDFDMAR+L GSE+ E+Y  GA  V P    AGD+DT
Sbjct:    9 VGVIGAGRIGKIHAENLATRIPGVEVVAIADPNVAAAKELAEEL-HVSSYSEDYRKILDDKSIEAVLICSSTDTHARFMTEAAEAGKHIFCEKPVDHSLEKIDAALAAVKKAGVKCQIGFNRRFDPNFKKVRQMVNEGKVGEVQILRITSRDPAPPPVSYVKVSGGMFLDMTIHDFDMARYLSGSEVVEVYAAGAVMVDPGIGEAGDIDT 217
[Close]
BLAST of NO09G01090 vs. NCBI_GenBank
Match: WP_026630396.1 (inositol 2-dehydrogenase [Dyadobacter alkalitolerans])

HSP 1 Score: 211.5 bits (537), Expect = 3.000e-51
Identity = 104/215 (48.37%), Postives = 138/215 (64.19%), Query Frame = 0 
Query:   33 LGVGVVGCGRIGQIHGNTLAFHTPGARLVAITD---PFEEMGKKLIGQTGGMPTYHKDYFELLDRDDVHAVVVASPTPCHVEQIMSAVERGKHDFCEKPISNDLSAIDACTQAAAKAGTKLILGFQRRFDINFQNVKKQITQGAIGEMRTFRIVSRDQAPPPAEYLKTSGGIFLDMSSHDFDMARFLVGSEIEEIYVKGASWV-PEAKAAGDLDT 244
            L  GV+G GRIGQIH + L  H P A ++  +D      E  + L     G+     D +++++  DV AV++ SPTP HV   ++A E+GKH FCEKP+   L AI A  +A ++   KL+LGF RRFD NF NV+  +    IG+    RI SRD APPP EYLK SGGIFLDMS HDFDMAR++VGSE++E++VKG + + PE K  GD+DT
Sbjct:    5 LKTGVIGLGRIGQIHLSNLVHHMPDAEVIIASDVSPAAHEFARSL-----GVAEVTTDAYDVINHPDVEAVIICSPTPFHVPYTVAAAEKGKHVFCEKPLDVTLEAIHAAEKAVSENNVKLMLGFNRRFDANFSNVRSLVEANKIGDPHILRITSRDPAPPPVEYLKISGGIFLDMSIHDFDMARYIVGSEVKEVFVKGDALIHPEIKEFGDIDT 214
[Close]
BLAST of NO09G01090 vs. NCBI_GenBank
Match: WP_090330470.1 (inositol 2-dehydrogenase [Dyadobacter koreensis] >SEI37068.1 myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [Dyadobacter koreensis])

HSP 1 Score: 211.5 bits (537), Expect = 3.000e-51
Identity = 104/212 (49.06%), Postives = 137/212 (64.62%), Query Frame = 0 
Query:   33 LGVGVVGCGRIGQIHGNTLAFHTPGARLVAITDPFEEMGKKLIGQTGGMPTYHKDYFELLDRDDVHAVVVASPTPCHVEQIMSAVERGKHDFCEKPISNDLSAIDACTQAAAKAGTKLILGFQRRFDINFQNVKKQITQGAIGEMRTFRIVSRDQAPPPAEYLKTSGGIFLDMSSHDFDMARFLVGSEIEEIYVKGASWV-PEAKAAGDLDT 244
            L +GV+G GRIGQIH + L  H PG  +V  +D   E       +  G+     D +++++  DV AV++ SPTP HV   ++A  + KH FCEKP+   L AI A  +A ++ G KL+LGF RRFD NF NV+  +    IG+ +  RI SRD  PPP EYLKTSGGIFLDMS HDFDMAR++VGSE+ EI+VKG + + PE K  GD+DT
Sbjct:    5 LKIGVIGLGRIGQIHLSNLMHHIPGVEVVIASDLSPE--SHAFAKNLGVEEVTTDAYDVINHPDVEAVIICSPTPFHVPYTVAAANQKKHVFCEKPLDVTLDAIYAAQKAVSENGVKLMLGFNRRFDANFTNVRNIVADDKIGDPQILRITSRDPGPPPIEYLKTSGGIFLDMSIHDFDMARYIVGSEVTEIFVKGDALINPEIKEFGDIDT 214
[Close]
BLAST of NO09G01090 vs. NCBI_GenBank
Match: WP_062419804.1 (inositol 2-dehydrogenase [Levilinea saccharolytica] >KPL81689.1 oxidoreductase [Levilinea saccharolytica])

HSP 1 Score: 211.1 bits (536), Expect = 3.900e-51
Identity = 102/212 (48.11%), Postives = 137/212 (64.62%), Query Frame = 0 
Query:   33 LGVGVVGCGRIGQIHGNTLAFHTPGARLVAITDPFEEMGKKLIGQTGGMPTYHKDYFELLDRDDVHAVVVASPTPCHVEQIMSAVERGKHDFCEKPISNDLSAIDACTQAAAKAGTKLILGFQRRFDINFQNVKKQITQGAIGEMRTFRIVSRDQAPPPAEYLKTSGGIFLDMSSHDFDMARFLVGSEIEEIYVKGASWV-PEAKAAGDLDT 244
            L  GV+G GRIG+IH   LA   PGA + AI D   EM ++   +   +P  + DY ++L   ++ AV + S T  H   ++ A + GKH FCEKPI +DL+ IDA  +A  KAG KL +GF RRFD NF +V++ ++QG +G++   RI SRD APPP  Y+K SGG+FLDM+ HDFDMARFL GSE+EE++V     V P    AGD+DT
Sbjct:    2 LRFGVIGAGRIGKIHAENLANRVPGAEVAAIADVNLEMAQETAARL-RIPAVYADYHQILADPNIDAVAICSSTDTHAHIVVEAAQAGKHIFCEKPIDHDLAKIDAALEAVKKAGVKLQIGFNRRFDPNFAHVRELVSQGKVGDLHLLRITSRDPAPPPVSYVKVSGGMFLDMTIHDFDMARFLSGSEVEEVFVAAGVLVDPGIGEAGDVDT 212
The following BLAST results are available for this feature:
BLAST of NO09G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_019944399.13.600e-5248.84inositol 2-dehydrogenase [Dyadobacter beijingensis... [more]
OJV15496.16.100e-5249.06inositol 2-dehydrogenase [Dyadobacter sp. 50-39][more]
PJF48834.16.100e-5250.23inositol 2-dehydrogenase [Chloroflexi bacterium][more]
WP_106597967.18.000e-5249.06inositol 2-dehydrogenase [Dyadobacter jiangsuensis... [more]
WP_090148774.11.400e-5149.06inositol 2-dehydrogenase [Dyadobacter soli] >SDE50... [more]
WP_105498717.11.800e-5148.85inositol 2-dehydrogenase [Candidatus Sulfopaludiba... [more]
PKO01347.12.300e-5148.57inositol 2-dehydrogenase [Chloroflexi bacterium HG... [more]
WP_026630396.13.000e-5148.37inositol 2-dehydrogenase [Dyadobacter alkalitolera... [more]
WP_090330470.13.000e-5149.06inositol 2-dehydrogenase [Dyadobacter koreensis] >... [more]
WP_062419804.13.900e-5148.11inositol 2-dehydrogenase [Levilinea saccharolytica... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01090.1NO09G01090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589163gene_4447Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01090.1NO09G01090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01090 ID=NO09G01090|Name=NO09G01090|organism=Nannochloropsis oceanica|type=gene|length=735bp
ATGGCCTTCAAGCAGGCCGTCGTCGTCCTTCTAAGTCTCGCCTTCCATTT
CCCGGTCCTAACTTGGGGCTTCTTTCTCCGCATGTCCCGAACACCGTTGG
GAGTAGGCGTCGTTGGCTGCGGGCGCATCGGACAGATACACGGCAATACC
CTCGCTTTCCACACGCCAGGCGCGCGGCTTGTGGCCATTACGGACCCCTT
CGAGGAGATGGGTAAGAAGTTAATAGGACAAACGGGTGGCATGCCCACCT
ACCACAAGGACTACTTCGAGCTGCTTGACCGCGACGATGTGCATGCCGTG
GTGGTGGCTTCACCCACGCCCTGCCACGTGGAGCAAATCATGTCGGCCGT
CGAGCGTGGCAAACACGACTTCTGTGAGAAACCGATCTCGAACGATCTCT
CTGCTATTGACGCCTGCACTCAAGCTGCGGCTAAGGCGGGCACCAAGCTC
ATCCTCGGCTTCCAACGTCGCTTCGACATCAACTTTCAAAATGTCAAGAA
GCAGATCACGCAAGGCGCAATTGGCGAAATGCGGACTTTCCGCATCGTAA
GTCGGGATCAGGCCCCACCCCCTGCTGAGTACCTCAAGACAAGCGGCGGC
ATCTTTTTGGACATGAGCAGCCACGATTTTGATATGGCTCGTTTCTTGGT
GGGGAGCGAGATTGAGGAGATCTACGTGAAAGGAGCCTCGTGGGTGCCCG
AGGCTAAGGCGGCAGGGGACCTGGACACTCTGTGA
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protein sequence of NO09G01090.1

>NO09G01090.1-protein ID=NO09G01090.1-protein|Name=NO09G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=245bp
MAFKQAVVVLLSLAFHFPVLTWGFFLRMSRTPLGVGVVGCGRIGQIHGNT
LAFHTPGARLVAITDPFEEMGKKLIGQTGGMPTYHKDYFELLDRDDVHAV
VVASPTPCHVEQIMSAVERGKHDFCEKPISNDLSAIDACTQAAAKAGTKL
ILGFQRRFDINFQNVKKQITQGAIGEMRTFRIVSRDQAPPPAEYLKTSGG
IFLDMSSHDFDMARFLVGSEIEEIYVKGASWVPEAKAAGDLDTL*
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Synonyms
Publications