NO09G00810, NO09G00810 (gene) Nannochloropsis oceanica

Overview
NameNO09G00810
Unique NameNO09G00810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2592
Alignment locationchr9:284339..286930 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:284339..286930 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO09G00810 vs. NCBI_GenBank
Match: EWM27705.1 (hypothetical protein Naga_100034g8 [Nannochloropsis gaditana])

HSP 1 Score: 285.4 bits (729), Expect = 5.800e-73
Identity = 225/628 (35.83%), Postives = 300/628 (47.77%), Query Frame = 0 
Query:   42 MAAEIKLVQGHYKVYQAQTAVYHRLLSVQYHLDSSRLP-----APTSKEYLLRQVESQLDEQEETRQLEASNTALLSHLDKEGCLKNSTAVAQPFVQLLIKAAVRHAWKEQAMLILVLRRTGLALKKKRKCGLVLEKVVRWGGLEALKLVMTGCLKLLQQQSEGGE------GKGEEENKIVTTA-NELLEGALKALFLLPVDLEAVKDANMARFLTMLRTTAGHTGDREGSGSGRGGQAAHAVVSKLAQVVTDKWAEYANISQYRRHQEQSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTFAQQPAGDLSVKRPRQVTMEEAEAAADAKAKRIDLRKRGQGGGIQVVAGSPIGPSPSSRD--------------------NGEENFAVPHPASQIDSTKTSTGASEEGQRGLAAEAAGQPVVARPPSTAPAAGPPLHENSKKKKAVRWRDQHGEGELREVFIFVKKAFENMDDEKDGQLHSTGG-TWTELAKREHLNERDALRGISXXXXXXXXXXXXXXXXXXXDRVRSAPPVTTIAWHIPPRLAQANSLPETESSEVTVQNSRTRLSIERCYLHESEIPVTPQEDSQVVFQPAADASRMTMLEIIPWVVGAAAEKRQ 637
            M   +KLVQ H+K++QAQT  YH LL +Q  L +         +P S EY LR +E +L E+E+T + +   T LLS +DK+GCL +   V QP++QLLIK+  R  W+EQA+L+L+LRRTGLALKK+RK  LVLEK+VRWGGLE LK V+ GCL+  Q   E           G    ++V  A +ELL   LKAL LLPVD+EAVKD+NMARFL+ +        D   S + +     + VV +L Q+VT+KWAE++                                     XXXXXXXXX                      E+           ++L  +  GG IQ  A   +G  P                                                                         P        +SK++++VRWRD+HG+G+LREVF+F K+A      E+D    ++GG +WTELAKREHLNER AL+  +                    R  S  P  T+ WH+PPRLA ++  PE ES+EV  + +RTR+ IER YLHE EIP TP ED   V + +  A    +LE+IPW  GA  EKRQ
Sbjct:    1 MIEHLKLVQSHFKMFQAQTVAYHGLLDMQSFLQNKHQQGTCGRSPLSTEYKLRLLEFELAEREDTLRKDTFKTNLLSCVDKDGCLMDLATVVQPYLQLLIKSVSRRCWREQALLVLILRRTGLALKKRRKYSLVLEKLVRWGGLEVLKAVVNGCLQHQQHSQERANRNAPLGDPGTLSKEVVERAVSELLVATLKALVLLPVDIEAVKDSNMARFLSTVSQAFAAAPD--SSETCKEIHHHNVVVPRLVQIVTNKWAEFSR-----------------------------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQTRIGEGPSPALVELSSKVSGGQIQEGAEETLGKRPRQASAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITXXXXPGGSTNDAPSSKRRRSVRWRDEHGDGQLREVFVFEKEA-----GEEDAPASASGGRSWTELAKREHLNERAALQK-TGGMSGKGDDGSLKKEGLDAPRKSSDSPSRTVPWHLPPRLAVSDPPPELESTEVFDETARTRVLIERQYLHEDEIPYTPHEDKSAVARASPGAPPAPILEVIPWAGGAVEEKRQ 585
The following BLAST results are available for this feature:
BLAST of NO09G00810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27705.15.800e-7335.83hypothetical protein Naga_100034g8 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010551NSK010551Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00810.1NO09G00810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100034g8gene2851Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00810.1NO09G00810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00810 ID=NO09G00810|Name=NO09G00810|organism=Nannochloropsis oceanica|type=gene|length=2592bp
ATGACCGACCATTCTACAGAATTGACATGTTACAGGGAGGACGGTAGCCA
AAAAAGGAGGGGCCGGACCTTGGTCGCCCAGGGGGAGGAGTACGGTCTTG
CTTGGTCAGGCCAAGCAGCGATCATGGCAGCGGAAATCAAGCTTGTTCAG
GGCCATTACAAGGTATACCAGGCCCAAACGGCCGTATACCACCGTCTCTT
GAGCGTTCAGTACCACCTTGACTCGTCTCGCCTGCCGGCACCCACGAGCA
AGGAGTACCTTCTCCGACAAGTGGAATCACAGCTTGATGAGCAGGAAGAG
ACAAGGCAACTAGAAGCCTCCAATACGGCCCTGCTCTCCCACCTAGATAA
GGAAGGCTGTTTGAAGAACTCGACCGCGGTAGCACAACCTTTTGTGCAGC
TCTTGATCAAGGCGGCAGTGCGCCATGCGTGGAAGGAGCAAGCCATGTTG
ATCCTCGTTCTGCGCCGGACAGGTTTGGCCCTCAAGAAGAAGCGGAAATG
CGGACTAGTGCTGGAAAAGGTGGTACGGTGGGGGGGATTGGAGGCGCTCA
AACTCGTCATGACCGGGTGTTTAAAGCTGCTGCAGCAGCAGTCCGAGGGA
GGGGAGGGTAAAGGAGAAGAAGAAAACAAAATTGTCACAACGGCAAATGA
ACTCTTGGAAGGCGCGCTCAAAGCATTGTTTCTTCTGCCCGTCGACTTGG
AAGCTGTCAAAGATGCCAACATGGCTCGCTTCCTCACCATGCTCCGGACT
ACGGCGGGGCACACGGGGGATAGGGAGGGGTCTGGGAGTGGAAGGGGGGG
ACAGGCCGCGCATGCCGTCGTGTCCAAGTTGGCCCAAGTGGTGACAGACA
AGTGGGCTGAATATGCGAATATCAGTCAATATAGGCGACATCAAGAACAA
TCGGCGGCAGCTGCTGCAGTGACCGCGCCAGTGACGGCATCACTAGCAGC
AGCAGTCCCAGCGGATATGACAGGAGCAACAGCGGCCGCGACTGTCAGCA
AGACCAGCAAGACTTTCGCGCAGCAGCCGGCAGGAGATTTGTCAGTCAAA
CGGCCCCGGCAAGTGACGATGGAAGAAGCGGAAGCTGCTGCCGATGCCAA
GGCCAAGCGAATTGATCTGCGCAAGCGGGGCCAGGGAGGCGGTATACAGG
TGGTGGCTGGCAGTCCGATTGGACCTTCGCCGTCGTCAAGGGACAATGGA
GAGGAAAACTTTGCCGTTCCCCACCCTGCATCACAAATTGACAGCACCAA
AACGAGCACAGGCGCAAGTGAAGAAGGACAAAGGGGGTTAGCAGCAGAAG
CAGCAGGACAACCAGTCGTTGCACGACCACCATCGACGGCACCAGCCGCA
GGACCGCCCTTACATGAGAATTCCAAAAAGAAGAAGGCCGTGCGGTGGAG
GGACCAGCATGGAGAAGGCGAACTGCGGGAGGTCTTCATATTTGTGAAGA
AAGCGTTTGAGAACATGGACGACGAGAAGGACGGACAACTTCACTCCACC
GGGGGTACTTGGACAGAGCTGGCCAAGCGGGAGCATTTGAACGAGCGGGA
CGCTCTTCGGGGCATTTCAGGTGGTGGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCATGGTAGATCGAGTTCGGTCCGCTCCTCCG
GTCACCACAATAGCATGGCATATTCCCCCCCGCTTAGCCCAAGCCAACTC
CTTGCCGGAGACGGAGTCGTCGGAGGTCACCGTCCAAAACAGCAGGACAC
GTTTATCGATCGAACGGTGTTACCTGCACGAGAGCGAGATCCCCGTCACG
CCACAGGAGGACTCCCAGGTGGTCTTCCAGCCTGCGGCTGATGCCAGCCG
CATGACCATGTTGGAGATCATTCCATGGGTGGTGGGCGCAGCAGCAGAGA
AGAGACAAAAGCTGGCGCAGATTGCAACGCCTCCCGCACCCCCTTCACCA
CCACCGCAACAACCACAACATCAACAACTACAACTACAACTACAACTACA
AAAACCGCCGCCGCCGCCACCACCACCACCACCACCACCATCATCATCAT
CATCATCACCACCACCAACAACAAAACAACAAGAACAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAATGGTACCAAGGAGGATTGCTGTCGGCCGTACC
GGCTCGGGGGATAAGCCCTCTAGATAACTTGCTGCGAGGTGTGGAGCACA
GTGGCGGTAACCCGAATATGCTAGAAGCCCTGCTTGCCCAGCCAAATCTC
ATCACGGCCGCCACCGCACAGTTACACCAGCAGTCGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCGCAGCATGTCCACCCAC
AGCCTCATCTCACACATCCCAATTATTTCCATCATCAGCAACAACCTCAG
CCCACGGCCCAGTTGCTTGCGAGTCTGCTTCTAGGGAACGCAGGGGGAGG
CTGGGCGCCACCACCACCACAAGGTCCACCCTCCTTACCCATGTCTTCAC
TTTTGGGGCCAGCGGCTCACAACTCATCCCACAATCAGCAGCAGAACCAG
CAGCAGCAAGAGCATGGCAAAGACAAGCATCGATGGCGGTAG
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protein sequence of NO09G00810.1

>NO09G00810.1-protein ID=NO09G00810.1-protein|Name=NO09G00810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=864bp
MTDHSTELTCYREDGSQKRRGRTLVAQGEEYGLAWSGQAAIMAAEIKLVQ
GHYKVYQAQTAVYHRLLSVQYHLDSSRLPAPTSKEYLLRQVESQLDEQEE
TRQLEASNTALLSHLDKEGCLKNSTAVAQPFVQLLIKAAVRHAWKEQAML
ILVLRRTGLALKKKRKCGLVLEKVVRWGGLEALKLVMTGCLKLLQQQSEG
GEGKGEEENKIVTTANELLEGALKALFLLPVDLEAVKDANMARFLTMLRT
TAGHTGDREGSGSGRGGQAAHAVVSKLAQVVTDKWAEYANISQYRRHQEQ
SAAAAAVTAPVTASLAAAVPADMTGATAAATVSKTSKTFAQQPAGDLSVK
RPRQVTMEEAEAAADAKAKRIDLRKRGQGGGIQVVAGSPIGPSPSSRDNG
EENFAVPHPASQIDSTKTSTGASEEGQRGLAAEAAGQPVVARPPSTAPAA
GPPLHENSKKKKAVRWRDQHGEGELREVFIFVKKAFENMDDEKDGQLHST
GGTWTELAKREHLNERDALRGISGGGSSSSSSSSSSSSSSMVDRVRSAPP
VTTIAWHIPPRLAQANSLPETESSEVTVQNSRTRLSIERCYLHESEIPVT
PQEDSQVVFQPAADASRMTMLEIIPWVVGAAAEKRQKLAQIATPPAPPSP
PPQQPQHQQLQLQLQLQKPPPPPPPPPPPPSSSSSSPPPTTKQQEQQQQQ
QQQQQQWYQGGLLSAVPARGISPLDNLLRGVEHSGGNPNMLEALLAQPNL
ITAATAQLHQQSQQQQQQQQQQQQQQQSQHVHPQPHLTHPNYFHHQQQPQ
PTAQLLASLLLGNAGGGWAPPPPQGPPSLPMSSLLGPAAHNSSHNQQQNQ
QQQEHGKDKHRWR*
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Synonyms
Publications