NO09G00040, NO09G00040 (gene) Nannochloropsis oceanica

Overview
NameNO09G00040
Unique NameNO09G00040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3109
Alignment locationchr9:12117..15225 -

Link to JBrowse

Properties
Property NameValue
DescriptionChlorophyll synthase, putative chloroplast
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:12117..15225 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000537UbiA_prenyltransferase
Homology
[Close]
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_008792890.1 (PREDICTED: chlorophyll synthase, chloroplastic [Phoenix dactylifera])

HSP 1 Score: 480.7 bits (1236), Expect = 4.400e-132
Identity = 228/327 (69.72%), Postives = 266/327 (81.35%), Query Frame = 0 
Query:   72 GSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            G ++  QLLG+KGAA+  D  KIR+QL KPVTW PL+WG+VCGAAASGN+HW                 +ED AKA+ CML++GP LTGFTQT+NDWYD++IDAINEPYRPIPSG ISE +V  QIW LLL GL LAG+LD+WAGH  P IL L+  GS +SYIYSAPPLKLKQ+GWIGN+ALG SYISLPWW GQ++FGTL   ++VLT+LYS+AGLGIAIVNDFKSIEGDRA+GL SLPVAFGIDTAKWIC G ID+TQL +AGYL   G+  YALALLGLI+PQ+ FQF+YFLKDP+KYDVKYQASAQPFL+LG+L TALA  H
Sbjct:   64 GGSSFNQLLGIKGAAQESDKWKIRVQLTKPVTWPPLVWGIVCGAAASGNFHWT----------------VEDVAKAIVCMLMSGPCLTGFTQTLNDWYDREIDAINEPYRPIPSGAISENEVITQIWLLLLGGLSLAGLLDVWAGHKVPVILYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQSLFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSIEGDRALGLQSLPVAFGIDTAKWICAGAIDITQLSIAGYLLGAGKPLYALALLGLIIPQVVFQFQYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 374
[Close]
BLAST of NO09G00040 vs. NCBI_GenBank
Match: AJB84630.1 (chlorophyll synthase [Camellia sinensis])

HSP 1 Score: 480.7 bits (1236), Expect = 4.400e-132
Identity = 232/333 (69.67%), Postives = 270/333 (81.08%), Query Frame = 0 
Query:   67 DNSEVGSNTA-RQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            D + V S ++  QLLG+KGA +  D  KIR+QL KPVTW PL+WGVVCGAAASGN+HW                 L+D AK++ CML++GP LTG+TQT+NDWYD++IDAINEPYRPIPSG ISE +V  QIW LLL GLGLAG+LD+WAGH  PTI  L+  GS +SYIYSAPPLKLKQ+GW+GN+ALG SYISLPWW GQA+FGTL   ++VLT+LYS+AGLGIAIVNDFKS+EGDRA+GL SLPVAFG +TAKWICVG IDVTQL VAGYL   G+  YALALLGLILPQ+FFQFKYFLKDP+KYDVKYQASAQPFL+LG+L TALA  H
Sbjct:   58 DKAPVASGSSFNQLLGIKGAKQETDKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWT----------------LDDVAKSIVCMLMSGPCLTGYTQTLNDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLAGLLDVWAGHDFPTIFYLAIGGSLLSYIYSAPPLKLKQNGWLGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGSETAKWICVGAIDVTQLSVAGYLLGAGKPFYALALLGLILPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 374
[Close]
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_024545677.1 (chlorophyll synthase, chloroplastic [Selaginella moellendorffii] >XP_024545678.1 chlorophyll synthase, chloroplastic [Selaginella moellendorffii] >XP_024545679.1 chlorophyll synthase, chloroplastic [Selaginella moellendorffii])

HSP 1 Score: 480.7 bits (1236), Expect = 4.400e-132
Identity = 236/330 (71.52%), Postives = 266/330 (80.61%), Query Frame = 0 
Query:   69 SEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            S+  S+   QLLGMKGA +  D  KIR+QL KPVTW PLIWGV+CGAAASGN+HW                 +ED AK++TCML+AGP LTG+TQTINDWYD++IDAINEPYRPIPSG ISE +V  QIW LLL G+GLA  LD+WAGH+ PTI  LS  G+ +SYIYSAPPLKLKQSGWIGNYALG SYI+LPWW  QA+FGTL+  VVVLT+LYS AGLGIAIVNDFKSIEGDRAMGL SLPVAFGIDTAKWIC+G+ID+TQL VAGYL   G+  YALALLGLI PQI FQF+YFLKDP+KYDVKYQASAQPF VLG+L TALA  H
Sbjct:   77 SDTRSSAVNQLLGMKGAGKETDKWKIRLQLTKPVTWAPLIWGVLCGAAASGNFHWT----------------IEDVAKSITCMLMAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEPEVITQIWVLLLGGIGLAYTLDVWAGHSFPTIFCLSLGGALLSYIYSAPPLKLKQSGWIGNYALGSSYIALPWWASQALFGTLSWDVVVLTLLYSTAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDTAKWICIGSIDLTQLSVAGYLFATGKLYYALALLGLITPQIIFQFQYFLKDPLKYDVKYQASAQPFFVLGLLVTALATSH 390
[Close]
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_006843631.1 (chlorophyll synthase, chloroplastic [Amborella trichopoda] >ERN05306.1 hypothetical protein AMTR_s00007p00156370 [Amborella trichopoda])

HSP 1 Score: 480.3 bits (1235), Expect = 5.800e-132
Identity = 230/327 (70.34%), Postives = 269/327 (82.26%), Query Frame = 0 
Query:   72 GSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            G ++  QLLG+KGA++  +  KIR+QL KPVTW PL+WGVVCGAAASGN+HW                 +ED AK++ CMLL+GP LTG+TQTIND+YDK+IDAINEPYRPIPSG ISEG+V  QIW LLL GLGLA +LD+WAGH+ P I  L+  GS +SYIYSAPPLKLKQ+GWIGN+ALG SYISLPWW GQA+FGTL   V+VLT+LYS+AGLGIAI+NDFKSIEGDRA+GL SLPVAFG+DTAKWICVG ID+TQ+ VAGYL   G+T YALAL+GL++PQ+ FQF+YFLKDPIKYDVKYQASAQPFLVLGIL TALA  H
Sbjct:   80 GGSSFNQLLGIKGASQESNTWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHW----------------NIEDVAKSIVCMLLSGPFLTGYTQTINDYYDKEIDAINEPYRPIPSGAISEGEVITQIWVLLLGGLGLAVLLDVWAGHSFPIIFCLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDVIVLTVLYSIAGLGIAIINDFKSIEGDRALGLQSLPVAFGVDTAKWICVGAIDITQISVAGYLLATGKTYYALALMGLVIPQMIFQFQYFLKDPIKYDVKYQASAQPFLVLGILVTALAYSH 390
[Close]
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_022893535.1 (chlorophyll synthase, chloroplastic [Olea europaea var. sylvestris])

HSP 1 Score: 480.3 bits (1235), Expect = 5.800e-132
Identity = 233/333 (69.97%), Postives = 269/333 (80.78%), Query Frame = 0 
Query:   66 KDNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            K  +E GS +  Q+LG+KGA +  D  KIR+QLMKPVTW PL+WGVVCGAAASGN+HW                 LED AK++ CML++GP LTG+TQT+NDWYD++IDAINEPYRPIPSG ISE +V  QIW LLL GLGLAG+LD+WAGH  P I  ++  GS +SYIYSAPPLKLKQ+GWIGN+ALG SYISLPWW GQA+FGTL   VVVLT+LYS+AGLGIAIVNDFKS+EGDR MGL SLPVAFG +TAKWICVG ID+TQL VAGYL   G+  YALALLGL+ PQ+FFQFKYFLKDP+KYDVKYQASAQPFL+LG+L TALAV H
Sbjct:   56 KAPAESGS-SINQILGIKGAKQETDKWKIRVQLMKPVTWPPLVWGVVCGAAASGNFHWT----------------LEDVAKSIVCMLVSGPCLTGYTQTLNDWYDREIDAINEPYRPIPSGAISEDEVITQIWVLLLGGLGLAGLLDVWAGHNFPVIFYIAIGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTLDVVVLTLLYSIAGLGIAIVNDFKSVEGDRKMGLQSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKQYYALALLGLVAPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALAVSH 371
[Close]
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_011095035.1 (chlorophyll synthase, chloroplastic [Sesamum indicum])

HSP 1 Score: 479.9 bits (1234), Expect = 7.500e-132
Identity = 233/345 (67.54%), Postives = 271/345 (78.55%), Query Frame = 0 
Query:   55 ETSLGMKGKGKKDNSEVGSNTA-RQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            ET     G    D +  GS ++  Q+LG+KGA +  D  KIR+QL KPVTW PL+WGVVCGAAASGN+HW                 LED AKAV CM+++GP LTG+TQTINDWYD++IDAINEPYRPIPSG ISE +V  QIW LLL GLGLAG+LD+WAGH  P I  L+  GS +SYIYSAPPLKLKQ+GWIGN+ALG SYISLPWW GQA+FGTL   ++VLT+LYS+AGLGIAIVNDFKS+EGDR MGL SLPVAFG +TAKWICVG ID+TQ+ VAGYL  +G+  YA ALLGLI+PQ+FFQFKYFLKDP+KYDVKYQASAQPFL+LG+L TALA  H
Sbjct:   45 ETDTEKVGAKAPDKAPAGSGSSINQILGIKGAKQETDKWKIRVQLTKPVTWPPLVWGVVCGAAASGNFHWT----------------LEDVAKAVVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISEDEVITQIWVLLLGGLGLAGLLDVWAGHNFPVIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRKMGLQSLPVAFGSETAKWICVGAIDITQISVAGYLLGLGKPLYASALLGLIVPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 373
[Close]
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_018441238.1 (PREDICTED: chlorophyll synthase, chloroplastic-like [Raphanus sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 7.500e-132
Identity = 232/332 (69.88%), Postives = 266/332 (80.12%), Query Frame = 0 
Query:   67 DNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            D +  G ++  QLLG+KGAA+  +  KIR+QL KPVTW PL+WGVVCGAAASGN+HW                  ED AK++ CML++GP LTG+TQTINDWYD+DIDAINEPYRPIPSG ISE +V  Q+W LLL GLG+AGVLD+WAGHT PT+  L+  GS +SYIYSAPPLKLKQ+GW+GN+ALG SYISLPWW GQA+FGTL   VVVLT+LYS+AGLGIAIVNDFKS+EGDRAMGL SLPVAFG + AKWICVG IDVTQL V+GYL   G+  YALALL LI+PQI FQFKYFLKDP+KYDVKYQASAQPFLVLGI  TALA  H
Sbjct:   70 DKAPAGGSSINQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWTP----------------EDVAKSILCMLMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEQEVITQVWVLLLGGLGIAGVLDVWAGHTTPTLFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASYISLPWWAGQALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGTEAAKWICVGAIDVTQLSVSGYLLASGKPYYALALLALIIPQIVFQFKYFLKDPVKYDVKYQASAQPFLVLGIFVTALASSH 385
[Close]
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_020267581.1 (chlorophyll synthase, chloroplastic [Asparagus officinalis] >ONK67915.1 uncharacterized protein A4U43_C05F5120 [Asparagus officinalis])

HSP 1 Score: 479.9 bits (1234), Expect = 7.500e-132
Identity = 227/327 (69.42%), Postives = 267/327 (81.65%), Query Frame = 0 
Query:   72 GSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            G ++  QLLG+KGA +  D+ KIR+QL KPVTW PL+WGVVCGAAASGN+HW                 LED AKA+ CM+++GP LTG+TQT+NDWYD++IDAINEPYRPIPSG ISE +V  QIW LLL GLGLAG+LD+WAGH  P +  L+  GS +SYIYSAPPLKLKQ+GWIGN+ALG SYISLPWW GQA+FGTL   ++VLT+LYS+AGLGIAIVNDFKS+EGDRA+GL SLPVAFG +TAKWICVG ID+TQL +AGYL   G+  YALALLGLILPQ+FFQF+YFLKDP+KYDVKYQASAQPFL+LG+L TALA  H
Sbjct:   67 GGSSFNQLLGIKGAKQETDIWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHW----------------NLEDVAKAIVCMMMSGPCLTGYTQTLNDWYDREIDAINEPYRPIPSGAISEIEVITQIWVLLLGGLGLAGLLDVWAGHDSPILFYLALGGSLVSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGAIDITQLYIAGYLLGAGKPLYALALLGLILPQVFFQFEYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 377
[Close]
BLAST of NO09G00040 vs. NCBI_GenBank
Match: OAY81872.1 (Chlorophyll synthase, chloroplastic [Ananas comosus])

HSP 1 Score: 479.6 bits (1233), Expect = 9.800e-132
Identity = 243/379 (64.12%), Postives = 281/379 (74.14%), Query Frame = 0 
Query:   20 LPSLPQTRTVTRSSSFLRMALPSLNEEKPASFYPFETSLGMKGKGKKDNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            LP LP  R   R    +R A     E +PA+     +  G +G           +   QLLG+KGAA+  D  KIR+QL KPVTW PLIWGVVCGAAASGN+HW                 +ED AKA+ CM+++GP LTG+TQT+NDWYD+DIDAINEPYRPIPSG ISE +V  QIW LLL+GLGL  +LD+WAGH  P I  L+  GS +SYIYSAPPLKLKQ+GWIGN+ALG SYISLPWW GQA+FGTL   ++VLT+LYS+AGLGIAIVNDFKSIEGDRA+GL SLPVAFGIDTAKWICVG ID+TQL VAGYL   G+  YALALLGLI PQ+ FQF+YFLKDP+KYDVKYQASAQPFLVLG+L TALA  H
Sbjct:   36 LPLLPLARRRLR----VRAAETDAKEARPAAPEKAPSPAGAEG-----------SNINQLLGIKGAAQETDKWKIRLQLTKPVTWAPLIWGVVCGAAASGNFHW----------------NVEDIAKAIVCMIMSGPCLTGYTQTLNDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLSGLGLGALLDIWAGHKFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSIEGDRALGLQSLPVAFGIDTAKWICVGAIDITQLSVAGYLLASGKPFYALALLGLITPQVVFQFQYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH 383
[Close]
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_019256929.1 (PREDICTED: chlorophyll synthase, chloroplastic [Nicotiana attenuata] >OIS95879.1 chlorophyll synthase, chloroplastic [Nicotiana attenuata])

HSP 1 Score: 479.6 bits (1233), Expect = 9.800e-132
Identity = 231/341 (67.74%), Postives = 268/341 (78.59%), Query Frame = 0 
Query:   58 LGMKGKGKKDNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            L +K +        G ++  Q+LG+KGA +  D  KIR+QL KPVTW PL+WGVVCGAAASGN+HW                  ED AK++ CML++GP LTG+TQTINDWYD++IDAINEPYRPIPSG ISE +V  QIW LLL GLGLAG+LD+WAGH  PTI  L+  GS +SYIYSAPPLKLKQ+GWIGN+ALG SYISLPWW GQA+FGTL   ++VLT+LYS+AGLGIAIVNDFKSIEGDRAMGL SLPVAFG + AKWICVG ID+TQ+ VAGYL   G+  YALALLGLI PQ+FFQFKYFLKDP+KYDVKYQASAQPFL+LG+L TALA  H
Sbjct:   54 LKIKAQAPDKAPAAGGSSINQILGIKGAKQETDKWKIRVQLTKPVTWPPLVWGVVCGAAASGNFHWTP----------------EDVAKSIVCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEQEVINQIWVLLLGGLGLAGILDVWAGHDFPTIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSVAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGSEAAKWICVGAIDITQISVAGYLLGAGKPYYALALLGLIAPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 378
The following BLAST results are available for this feature:
BLAST of NO09G00040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008792890.14.400e-13269.72PREDICTED: chlorophyll synthase, chloroplastic [Ph... [more]
AJB84630.14.400e-13269.67chlorophyll synthase [Camellia sinensis][more]
XP_024545677.14.400e-13271.52chlorophyll synthase, chloroplastic [Selaginella m... [more]
XP_006843631.15.800e-13270.34chlorophyll synthase, chloroplastic [Amborella tri... [more]
XP_022893535.15.800e-13269.97chlorophyll synthase, chloroplastic [Olea europaea... [more]
XP_011095035.17.500e-13267.54chlorophyll synthase, chloroplastic [Sesamum indic... [more]
XP_018441238.17.500e-13269.88PREDICTED: chlorophyll synthase, chloroplastic-lik... [more]
XP_020267581.17.500e-13269.42chlorophyll synthase, chloroplastic [Asparagus off... [more]
OAY81872.19.800e-13264.12Chlorophyll synthase, chloroplastic [Ananas comosu... [more]
XP_019256929.19.800e-13267.74PREDICTED: chlorophyll synthase, chloroplastic [Ni... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00040.1NO09G00040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101224g2gene2732Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00040.1NO09G00040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00040 ID=NO09G00040|Name=NO09G00040|organism=Nannochloropsis oceanica|type=gene|length=3109bp
ATGCGATTTGCCCTGCCTCTCGTCCTGGCGCCGACTTTGGCTGTCACGGG
CTTCCTCCTTCCCAGCTTGCCTCAGgtaggtggacctagggagtcgagca
gcacacgatttcctgtacatccgtccttccagccctgatcattcgttcgc
tctactcagccctgtgtacatccatcatttgcactgtgctgcgcatggcg
tgcttcatttcaaatacctcctccccttcccatcggtttcccttccatcc
agACCCGGACCGTCACCCGCTCCTCCTCCTTCCTGCGCATGGCCCTCCCG
TCCCTGAATGAGGAGAAGCCCGCGTCATTCTATCCATTTGAGACGTCATT
AGGCATGAAGGGCAAGGGGAAGAAGGACAATAGTGAAGTGGGGAGCAACA
CTGCCAGgtatggagatgagggcacacagggagggggacgggaagggaga
gtgagagggatgggtgaaggaaagggaagatgaagaaggaaaggaatgta
aaggggaggggagaccgatgtggcctatacactgtaagattcaaggaaga
atccaatctcggctagaccacattacctcgtcatcttcgtccttccttcc
cgccctccctccctccctccttgcttcctcctttccttggtagGCAACTC
CTGGGCATGAAAGGTGCGGCTGAGACGGACGACCTCCTCAAGATTCGCAT
CCAGCTCATGAAGCCTGTCACTTGGATCCCTCTCATTTGGGGCGTGgtac
gttggaacaagagggagggagggagggagggagggagggagggagggagg
gagggagggagggagggagggagggagggagagagaatcctgcatgcctc
caaaaagataatgagtgtattccccccccctccctccctcctttgctctg
cgatggttccgtcagtaaaaccaatcagtggccgaatcccttcaatcaaa
ccagcccggacgccatccctaaatactcttcctcctccctctctccctcc
tttcctccctccctccctccttcagGTCTGCGGAGCCGCCGCCAGTGGCA
ACTACCACTGGGCCAATCCCCTGGACCAGGCCAATCCGGACGCCGTCCCT
CTTTCCCTCGGCTTGGAGGACGCTGCCAAGGCAGTCACATGTATGgtacg
tccctcccgccctccctccctccctccctccctcccttccaccctccttt
ccaccctccctccctctctatcctctttgtttctctatagcagcttttcc
tttactccgcttatgtgaatgctgtatctgaggcttctctcctcatcaag
ttctagcccaccctcatgggcctacagaccgttgaatcccgtcgtaaccc
tccctccctccctccctccctccccctcctcagCTTCTCGCCGGGCCCCT
CCTGACCGGTTTTACTCAAACCATTAACGACTGGTACGACAAGGACATCG
ACGCCATCAACGAGCCTTACCGCCCCATCCCCTCCGGGCGCATCTCCGAG
gtgtgggaggagaaagagacagaggaagggcgggagaaagaggggaagaa
tgagggtattacccttgtgtccaaccctaacagagtctcaccactcaatc
tcaaccccacctccattccctccctcccttcctccctccctctttccctc
cctccctccctccagGGCCAAGTGAAGGGGCAAATCTGGGGACTCCTTCT
GGCGGGCCTCGGCCTCGCCGGCGTGCTTGATTTGTGGGCCGGTCACACCG
AGCCCACGATCCTCGGTCTCTCCGCCCTGGGCTCCTTCATCTCCTACATC
TACAGCGCGCCGCCACTCAAGTTGAAGCAGgtgaagagagggacgaggga
gggacagagggaggatgggaggagggaaaaggaggctgcccttatttttt
gttttctgctgccgcggtgggatgagcacctaccctgacacgttcctctc
cttccctaccttcctacctacctacctacctacctgcctccctccctccc
ttacagAGCGGCTGGATCGGCAATTACGCGCTCGGGTGTTCTTACATCTC
CCTGCCCTGGTGGTGTGGGCAAGCCATGTTTGGCACTCTCAATGCACAGG
TGGTGGTGCTCACCATTCTCTACAGgtaggtagagggggaagaagagagg
gaggaagagagggagggctgatctgacctatcttttgttgccattgtaga
gcgcacaaaagctatctcccagtctaatctttgctgccgctcccccacct
ctccctccctctcttcttccccccctccctagTCTGGCCGGGCTCGGCAT
TGCTATCGTCAACGACTTCAAGTCCATCGAGGGCGATCGGGCCATGGGCC
TTAACTCCCTTCCCGTGGCATTCGGGATCGATACTGCCAAATGGATCTGC
GTTGGCACCATTGACGTCACCCAGgtggatgccttccctccctccttccc
tcccttcctcgctcccttcctccttccctttctcactctcattcgtctct
aggaaacttctcgaaattgaagcgtacccaaacatatcgaagctcactga
aatctcgtgttctcctgcttccttcccccccccctcatcctctccccaaa
agCTCGGCGTGGCTGGCTACCTGGCCTACATCGGCGAGACCACCTATGCG
CTCGCCCTGCTCGGCCTGATTTTACCCCAAATCTTCTTCCAATTCAAATA
CTTCTTGAAGGACCCCATCAAATATGATGTCAAGTATCAGgtgcgtacgt
ccctccgtccctccctctcattccttccttccatttttctgttcttgagg
aatattgtggtccataggatgttgtaggtgtgtgttcaatcgacacatag
tcttacaagcgtatacagatctcctgatgacaaattttagctgatggacc
ttagcaagccctccctcttcctattctttcctctgtccttccctctcctt
tccgcgaaacgattggtcaagcacgtactaatcgctcctcttgacttgcc
ctgcttccctcctttgcttcctcaatagGCGAGCGCACAGCCGTTCTTGG
TGCTGGGCATCCTGACGACGGCGCTGGCAGTGGGCCATCACGACTTTTCG
GGCATCTAA
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protein sequence of NO09G00040.1

>NO09G00040.1-protein ID=NO09G00040.1-protein|Name=NO09G00040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=405bp
MRFALPLVLAPTLAVTGFLLPSLPQTRTVTRSSSFLRMALPSLNEEKPAS
FYPFETSLGMKGKGKKDNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMK
PVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTC
MLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGL
LLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIG
NYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSI
EGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALA
LLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGHHD
FSGI*
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