NO09G00040, NO09G00040 (gene) Nannochloropsis oceanica

Overview
NameNO09G00040
Unique NameNO09G00040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3109
Alignment locationchr9:12117..15225 -

Link to JBrowse

Properties
Property NameValue
DescriptionChlorophyll synthase, putative chloroplast
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:12117..15225 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000537UbiA_prenyltransferase
Homology
BLAST of NO09G00040 vs. NCBI_GenBank
Match: CBJ27235.1 (Chlorophyll synthase, putative chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 506.5 bits (1303), Expect = 7.500e-140
Identity = 254/402 (63.18%), Postives = 299/402 (74.38%), Query Frame = 0
Query:   18 FLLPSLPQTRTVTRSSSFLRMALPSLNEEKPASFYPFETS--------------LGM----KGKGKKDNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGHHDF 402
            F +P+LP  R    ++    ++  S  ++KP SFYPF+ S               G+    + KG     E      RQL+G+KGA+ TD++LKIR+QL KPVTWIPLIWGV+CGAAASGNYHW NP    +   V   LG +D  KA+ CM+L+GP LTG+TQTINDWYD+DIDAINEPYRPIPSG ISE QV  QIW LLL GL +A  LD+WAGH  P +  LS  GSFISYIYSAPP+KLKQ+GW+GNYALG SYISLPWWCGQAMFG LN QVV+LT+LYS AGLGIAIVNDFKS+EGDR MGL SLPVAFG++ AKW+CVG+ID TQLG+A +L YIGE TYA  L  L+LPQ+F QFKYFL DP+  DVKYQA+AQPFLV GILTTALA+GHH F
Sbjct:   21 FHVPALPSARATAAANR--HVSRMSTADDKPKSFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDEILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPFGGGD---VSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAMGHHTF 417          
BLAST of NO09G00040 vs. NCBI_GenBank
Match: EJK49881.1 (hypothetical protein THAOC_31201 [Thalassiosira oceanica])

HSP 1 Score: 499.6 bits (1285), Expect = 9.200e-138
Identity = 259/417 (62.11%), Postives = 305/417 (73.14%), Query Frame = 0
Query:    1 MRFALPLVLAPTLAVTGFLLPSLPQTRTVTRSSSFLRMALPSLNEE------KPASFYPFETS------LGMKGKGKKDNSEV--GSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWA-NPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQV-VVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGHHDF 402
            M+  +  V   T   +G      P +RT +  +S  ++A+P  +E+        AS+YPF  S      + +  +  K N EV  GS   RQLLG+KGA+ET D+ KIR+QL KPVTWIPL+WGV+CGAAASGNYHW  NP D  + D +   LGLED AK    M+LAGP LTG+TQTINDWYD++IDAINEPYRPIPSG ISEGQV  QIW LLL GLG+A  LD WAGH  PT+L LS  GSFISYIYSAPPLKLKQ+GW GNYALGCSYISLPWWCGQA+FG L+  V  +L ILYS+AGLGIAIVNDFKS+EGDR +GL SLPVAFGIDTAKWIC G++ VTQLGVA YL  I ETTYA  L+GL+LPQI++Q    + DP+  DVKYQAS+QPF V GIL TAL +GHHDF
Sbjct:    1 MKSVVSAVAVATALASGVSAFVTPSSRTTSTDAS--QLAVPPADEKYIPVDSTRASYYPFGASTSSDRLISLSARPPKSNEEVTDGSANVRQLLGLKGASETTDIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFDPNDRDVM---LGLEDTAKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGQVIAQIWFLLLGGLGIAYGLDAWAGHDVPTVLLLSIFGSFISYIYSAPPLKLKQNGWAGNYALGCSYISLPWWCGQAVFGELDRPVYFILPILYSIAGLGIAIVNDFKSVEGDRQLGLQSLPVAFGIDTAKWICAGSVTVTQLGVAAYLQSINETTYAAILMGLLLPQIYYQATLLIPDPVANDVKYQASSQPFFVFGILATALCLGHHDF 412          
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_002289474.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93011.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 494.2 bits (1271), Expect = 3.900e-136
Identity = 263/408 (64.46%), Postives = 307/408 (75.25%), Query Frame = 0
Query:    1 MRFALPLVLAPTLAVTGFLLPSLPQTRTVTRSSSFLRMALPSLNEEKPASFYPF--ETSLGMKGKGKKDNSEV--GSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWA-NPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQV-VVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGHHDFS 403
            M+  LPL++   +A +    P+      V + SS L M LP+  +++  SFYPF  E+S  +     K N EV  GS   RQLLG+KGA+ T D+ KIR+QL KPVTWIPL+WGV+CGAAASGNYHW  NP D   P+   + LGLED AK    M+LAGP LTG+TQTINDWYD+DIDAINEPYRPIPSG ISEGQV  QIW LLL GLG+A  LD+WAGH  PT+L LS  GS++SYIYSAPPLKLKQ+GW GNYALGCSYISLPWWCGQA+FG L+  V  VL ILYS+AGLGIAIVNDFKSIEGDR +GL SLPVAFG+D AK+IC G++ +TQLGVA YL  IGETTYA  LLGL+LPQI+FQ    L DP+  DVKYQAS+QPF V GIL TAL +GHHDFS
Sbjct:    1 MKCVLPLLVTSAVAFS----PAPRSFVGVQQRSSSLSM-LPT--KQQTDSFYPFDKESSSKLSAVPPKSNEEVSDGSADVRQLLGVKGASGTTDIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFD---PNDRNVMLGLEDMAKGFVAMILAGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEGQVIFQIWFLLLGGLGIAYGLDVWAGHDFPTVLALSIFGSWVSYIYSAPPLKLKQNGWAGNYALGCSYISLPWWCGQAVFGELDRPVYFVLPILYSIAGLGIAIVNDFKSIEGDRELGLQSLPVAFGVDGAKYICAGSVTLTQLGVAAYLQSIGETTYAAILLGLLLPQIYFQATLLLPDPVANDVKYQASSQPFFVFGILATALCLGHHDFS 398          
BLAST of NO09G00040 vs. NCBI_GenBank
Match: CEM06441.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 491.9 bits (1265), Expect = 1.900e-135
Identity = 260/405 (64.20%), Postives = 302/405 (74.57%), Query Frame = 0
Query:    4 ALPLVLAPTLAVTGFLLPSLPQT--RTVTRSSSFLR---MALPSLNEEKPASFYP-FETSLGMKG---KGKKDNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGHH 400
            ALP  LA  LA   FL+ +L  T      R  +F+    + L S+    P+   P  + S G  G   K  KD  +    + RQLLG++GAAET D+ KIR+QLMKPVTWIPLIWGV+CGAAASGNYH  NPL   NP+AV LS   ED  K++ CM+LAGPLLTGFTQT+NDWYD++IDAINEPYRPIPSG ISEGQVKGQIWGLL+AGL +A  LDLWAGH  P IL L+  GS +SYIYSAPPLKLKQSGWIGNYALG SYISLPWWCGQAMFG LN  V++LT+LYS+ G+GIA VNDFKS+EGDR +GL SLPV FGID AKWI   +ID+TQLGVA Y+  + E  YA  L GL +PQIF Q KY LKDP+K+DV+YQA+AQPF V GILTTALA GHH
Sbjct:    4 ALPSFLA--LAGLSFLISALEATAANARPREGAFVPPRVVPLSSVLRPAPSHGAPSLQRSPGGGGVAMKEAKDEVKSNDKSVRQLLGVRGAAETTDIWKIRLQLMKPVTWIPLIWGVICGAAASGNYHTWNPL---NPEAVSLSEAGEDLLKSLACMVLAGPLLTGFTQTMNDWYDREIDAINEPYRPIPSGAISEGQVKGQIWGLLIAGLAVAYGLDLWAGHDTPNILLLAIFGSVVSYIYSAPPLKLKQSGWIGNYALGSSYISLPWWCGQAMFGELNPTVIILTLLYSIGGVGIATVNDFKSVEGDRELGLKSLPVQFGIDRAKWIAALSIDLTQLGVAAYVYSLDEPLYAAILAGLTIPQIFLQAKYLLKDPVKFDVQYQAAAQPFFVFGILTTALACGHH 403          
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_002180392.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47800.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 490.3 bits (1261), Expect = 5.600e-135
Identity = 249/376 (66.22%), Postives = 289/376 (76.86%), Query Frame = 0
Query:   42 SLNEEKPASFYPFETS------------LGMKGK-GKKDNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWA-NPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQV-VVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGHHDFS 403
            SL   K +SFYPF+ S            + ++ K G    +E GS   RQLLG+KGA+   ++ KIR+QL KPVTWIPL+WGV+CGAAASGNYHW  NPLD   P+   + LGLEDA K    M+LAGP LTG+TQTINDWYD++IDAINEPYRPIPSG ISEG+V  QIW LLL GLG+A  LD+WAGH  PT+L LS  GSFISYIYSAPPLKLKQ+GW GNYALG SYISLPWWCGQA+FGTL+  V  +L ILYS+AGLGIAIVNDFKSIEGDRA+GL SLPVAFGID AKWIC G++ +TQLGVA YL  +GE+ YA  L+ LILPQ++FQ    L DP++ DVKYQASAQPFLV GIL TAL +GHHDFS
Sbjct:   50 SLRPPKTSSFYPFDESSTTSTKRPTTSGVSLQAKPGPNAEAEDGSAGVRQLLGLKGASAESNIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPLD---PNDRNVMLGLEDALKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWILLLGGLGIAYGLDVWAGHETPTVLLLSIFGSFISYIYSAPPLKLKQNGWAGNYALGASYISLPWWCGQAVFGTLDKPVYFILPILYSIAGLGIAIVNDFKSIEGDRALGLQSLPVAFGIDKAKWICAGSVTLTQLGVAAYLQTLGESLYAGILIALILPQMYFQATLLLPDPVENDVKYQASAQPFLVFGILATALCIGHHDFS 422          
BLAST of NO09G00040 vs. NCBI_GenBank
Match: AAP79186.1 (chlorophyll synthetase [Bigelowiella natans])

HSP 1 Score: 488.0 bits (1255), Expect = 2.800e-134
Identity = 239/335 (71.34%), Postives = 275/335 (82.09%), Query Frame = 0
Query:   67 DNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGHHDF 402
            D+S+V     RQLLG++G ++TD++ KIR+QLMKPVTW+PLIWGV+CGAAASGNY+       A     PL + LED  K++ CM+LAGPLLTG+TQTINDWYD++IDAINEP RPIPSG I E +V  QIW LLL GLGLA  LD WAGH  P +  LS  GSF+SYIYSAPPLKLKQSGW GNYALG SYI+LPWWCGQAMFGTLNA V+VL++LYS+AGLGIAIVNDFKSIEGDR +GL SLPVAFG+DTAKW+C G+IDVTQLGVA YL  IGETTYA  L+ LILPQ+FFQ KY LKDPIKYDV YQA++QPFLV GIL TALA+GHH F
Sbjct:  176 DDSDV-----RQLLGVRGGSKTDNIWKIRLQLMKPVTWVPLIWGVICGAAASGNYN-------AVWSGAPLEVCLEDLGKSLGCMVLAGPLLTGYTQTINDWYDREIDAINEPDRPIPSGAIKENEVIAQIWALLLGGLGLAYGLDQWAGHDFPMVTALSIGGSFVSYIYSAPPLKLKQSGWAGNYALGSSYIALPWWCGQAMFGTLNAPVIVLSLLYSIAGLGIAIVNDFKSIEGDRKLGLQSLPVAFGVDTAKWLCAGSIDVTQLGVAAYLYSIGETTYANILIALILPQMFFQNKYLLKDPIKYDVNYQAASQPFLVFGILDTALAMGHHQF 498          
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_009421398.1 (PREDICTED: chlorophyll synthase, chloroplastic [Musa acuminata subsp. malaccensis])

HSP 1 Score: 486.1 bits (1250), Expect = 1.100e-133
Identity = 231/331 (69.79%), Postives = 272/331 (82.18%), Query Frame = 0
Query:   68 NSEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            +S+ G ++  QLLG+KGAA+  +  KIR+QL KPVTW PL+WGVVCGAAASGN+HW                 +ED +KA+ CM+++GP LTG+TQT+NDWYD++IDAINEPYRPIPSG ISEG+V  QIW LLL GLGLAG+LD+WAGH  P I  L+  GS +SYIYSAPPLKLKQ+GWIGN+ALG SYISLPWW GQA+FGTLN  ++VLT+LYS+AGLGIAIVNDFKSIEGDRAMGL SLPVAFGIDTAKWICVG ID+TQL VAGYL    +  YALALLGLILPQ++FQF+YFLKDP+K DVKYQASAQPFL+LG+L TALA+ H
Sbjct:   71 SSDAGGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHW----------------NIEDVSKAIVCMMMSGPCLTGYTQTLNDWYDREIDAINEPYRPIPSGAISEGEVITQIWLLLLGGLGLAGLLDVWAGHKSPVIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLNPDIIVLTLLYSIAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDTAKWICVGAIDITQLSVAGYLLGADKPFYALALLGLILPQVYFQFQYFLKDPVKNDVKYQASAQPFLILGLLVTALAISH 385          
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_009606938.1 (PREDICTED: chlorophyll synthase, chloroplastic [Nicotiana tomentosiformis])

HSP 1 Score: 481.5 bits (1238), Expect = 2.600e-132
Identity = 233/344 (67.73%), Postives = 269/344 (78.20%), Query Frame = 0
Query:   55 ETSLGMKGKGKKDNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            ET   +K +        G ++  Q+LG+KGA +  D  KIR+QL KPVTW PL+WGVVCGAAASGN+HW                  ED AK+V CML++GP LTG+TQTINDWYD++IDAINEPYRPIPSG ISE +V  QIW LLL GLGLAG+LD+WAGH  PTI  L+  GS +SYIYSAPPLKLKQ+GWIGN+ALG SYISLPWW GQA+FGTL   ++VLT+LYS+AGLGIAIVNDFKSIEGDRAMGL SLPVAFG + AKWICVG ID+TQ+ VAGYL   G+  YALALLGLI PQ+FFQFKYFLKDP+KYDVKYQASAQPFL+LG+L TALA  H
Sbjct:   46 ETDKEVKAQAPDTAPAAGGSSINQILGIKGAKQETDKWKIRVQLTKPVTWPPLVWGVVCGAAASGNFHWTP----------------EDVAKSVVCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEQEVINQIWVLLLGGLGLAGILDVWAGHNFPTIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSVAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGSEAAKWICVGAIDITQISVAGYLLGAGKPYYALALLGLIAPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 373          
BLAST of NO09G00040 vs. NCBI_GenBank
Match: XP_016473005.1 (PREDICTED: chlorophyll synthase, chloroplastic-like [Nicotiana tabacum])

HSP 1 Score: 481.5 bits (1238), Expect = 2.600e-132
Identity = 233/344 (67.73%), Postives = 269/344 (78.20%), Query Frame = 0
Query:   55 ETSLGMKGKGKKDNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            ET   +K +        G ++  Q+LG+KGA +  D  KIR+QL KPVTW PL+WGVVCGAAASGN+HW                  ED AK+V CML++GP LTG+TQTINDWYD++IDAINEPYRPIPSG ISE +V  QIW LLL GLGLAG+LD+WAGH  PTI  L+  GS +SYIYSAPPLKLKQ+GWIGN+ALG SYISLPWW GQA+FGTL   ++VLT+LYS+AGLGIAIVNDFKSIEGDRAMGL SLPVAFG + AKWICVG ID+TQ+ VAGYL   G+  YALALLGLI PQ+FFQFKYFLKDP+KYDVKYQASAQPFL+LG+L TALA  H
Sbjct:   46 ETDKEVKAQAPDKAPAAGGSSINQILGIKGAKQETDKWKIRVQLTKPVTWPPLVWGVVCGAAASGNFHWTP----------------EDVAKSVVCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEQEVINQIWVLLLGGLGLAGILDVWAGHNFPTIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSVAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGSEAAKWICVGAIDITQISVAGYLLGAGKPYYALALLGLIAPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 373          
BLAST of NO09G00040 vs. NCBI_GenBank
Match: AEI83422.1 (chlorophyll synthase [Camellia sinensis])

HSP 1 Score: 480.7 bits (1236), Expect = 4.400e-132
Identity = 232/333 (69.67%), Postives = 270/333 (81.08%), Query Frame = 0
Query:   67 DNSEVGSNTA-RQLLGMKGAAETDDLLKIRIQLMKPVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTCMLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGLLLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIGNYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALALLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGH 399
            D + V S ++  QLLG+KGA +  D  KIR+QL KPVTW PL+WGVVCGAAASGN+HW                 L+D AK++ CML++GP LTG+TQT+NDWYD++IDAINEPYRPIPSG ISE +V  QIW LLL GLGLAG+LD+WAGH  PTI  L+  GS +SYIYSAPPLKLKQ+GW+GN+ALG SYISLPWW GQA+FGTL   ++VLT+LYS+AGLGIAIVNDFKS+EGDRA+GL SLPVAFG +TAKWICVG IDVTQL VAGYL   G+  YALALLGLILPQ+FFQFKYFLKDP+KYDVKYQASAQPFL+LG+L TALA  H
Sbjct:   58 DKAPVASGSSFNQLLGIKGAKQETDKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWT----------------LDDVAKSIVCMLMSGPCLTGYTQTLNDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLAGLLDVWAGHDFPTIFYLAIGGSLLSYIYSAPPLKLKQNGWLGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGSETAKWICVGAIDVTQLSVAGYLLGAGKPFYALALLGLILPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 374          
The following BLAST results are available for this feature:
BLAST of NO09G00040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ27235.17.500e-14063.18Chlorophyll synthase, putative chloroplast precurs... [more]
EJK49881.19.200e-13862.11hypothetical protein THAOC_31201 [Thalassiosira oc... [more]
XP_002289474.13.900e-13664.46predicted protein [Thalassiosira pseudonana CCMP13... [more]
CEM06441.11.900e-13564.20unnamed protein product [Vitrella brassicaformis C... [more]
XP_002180392.15.600e-13566.22predicted protein [Phaeodactylum tricornutum CCAP ... [more]
AAP79186.12.800e-13471.34chlorophyll synthetase [Bigelowiella natans][more]
XP_009421398.11.100e-13369.79PREDICTED: chlorophyll synthase, chloroplastic [Mu... [more]
XP_009606938.12.600e-13267.73PREDICTED: chlorophyll synthase, chloroplastic [Ni... [more]
XP_016473005.12.600e-13267.73PREDICTED: chlorophyll synthase, chloroplastic-lik... [more]
AEI83422.14.400e-13269.67chlorophyll synthase [Camellia sinensis][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00040.1NO09G00040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101224g2gene2732Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00040.1NO09G00040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00040 ID=NO09G00040|Name=NO09G00040|organism=Nannochloropsis oceanica|type=gene|length=3109bp
ATGCGATTTGCCCTGCCTCTCGTCCTGGCGCCGACTTTGGCTGTCACGGG
CTTCCTCCTTCCCAGCTTGCCTCAGgtaggtggacctagggagtcgagca
gcacacgatttcctgtacatccgtccttccagccctgatcattcgttcgc
tctactcagccctgtgtacatccatcatttgcactgtgctgcgcatggcg
tgcttcatttcaaatacctcctccccttcccatcggtttcccttccatcc
agACCCGGACCGTCACCCGCTCCTCCTCCTTCCTGCGCATGGCCCTCCCG
TCCCTGAATGAGGAGAAGCCCGCGTCATTCTATCCATTTGAGACGTCATT
AGGCATGAAGGGCAAGGGGAAGAAGGACAATAGTGAAGTGGGGAGCAACA
CTGCCAGgtatggagatgagggcacacagggagggggacgggaagggaga
gtgagagggatgggtgaaggaaagggaagatgaagaaggaaaggaatgta
aaggggaggggagaccgatgtggcctatacactgtaagattcaaggaaga
atccaatctcggctagaccacattacctcgtcatcttcgtccttccttcc
cgccctccctccctccctccttgcttcctcctttccttggtagGCAACTC
CTGGGCATGAAAGGTGCGGCTGAGACGGACGACCTCCTCAAGATTCGCAT
CCAGCTCATGAAGCCTGTCACTTGGATCCCTCTCATTTGGGGCGTGgtac
gttggaacaagagggagggagggagggagggagggagggagggagggagg
gagggagggagggagggagggagggagggagagagaatcctgcatgcctc
caaaaagataatgagtgtattccccccccctccctccctcctttgctctg
cgatggttccgtcagtaaaaccaatcagtggccgaatcccttcaatcaaa
ccagcccggacgccatccctaaatactcttcctcctccctctctccctcc
tttcctccctccctccctccttcagGTCTGCGGAGCCGCCGCCAGTGGCA
ACTACCACTGGGCCAATCCCCTGGACCAGGCCAATCCGGACGCCGTCCCT
CTTTCCCTCGGCTTGGAGGACGCTGCCAAGGCAGTCACATGTATGgtacg
tccctcccgccctccctccctccctccctccctcccttccaccctccttt
ccaccctccctccctctctatcctctttgtttctctatagcagcttttcc
tttactccgcttatgtgaatgctgtatctgaggcttctctcctcatcaag
ttctagcccaccctcatgggcctacagaccgttgaatcccgtcgtaaccc
tccctccctccctccctccctccccctcctcagCTTCTCGCCGGGCCCCT
CCTGACCGGTTTTACTCAAACCATTAACGACTGGTACGACAAGGACATCG
ACGCCATCAACGAGCCTTACCGCCCCATCCCCTCCGGGCGCATCTCCGAG
gtgtgggaggagaaagagacagaggaagggcgggagaaagaggggaagaa
tgagggtattacccttgtgtccaaccctaacagagtctcaccactcaatc
tcaaccccacctccattccctccctcccttcctccctccctctttccctc
cctccctccctccagGGCCAAGTGAAGGGGCAAATCTGGGGACTCCTTCT
GGCGGGCCTCGGCCTCGCCGGCGTGCTTGATTTGTGGGCCGGTCACACCG
AGCCCACGATCCTCGGTCTCTCCGCCCTGGGCTCCTTCATCTCCTACATC
TACAGCGCGCCGCCACTCAAGTTGAAGCAGgtgaagagagggacgaggga
gggacagagggaggatgggaggagggaaaaggaggctgcccttatttttt
gttttctgctgccgcggtgggatgagcacctaccctgacacgttcctctc
cttccctaccttcctacctacctacctacctacctgcctccctccctccc
ttacagAGCGGCTGGATCGGCAATTACGCGCTCGGGTGTTCTTACATCTC
CCTGCCCTGGTGGTGTGGGCAAGCCATGTTTGGCACTCTCAATGCACAGG
TGGTGGTGCTCACCATTCTCTACAGgtaggtagagggggaagaagagagg
gaggaagagagggagggctgatctgacctatcttttgttgccattgtaga
gcgcacaaaagctatctcccagtctaatctttgctgccgctcccccacct
ctccctccctctcttcttccccccctccctagTCTGGCCGGGCTCGGCAT
TGCTATCGTCAACGACTTCAAGTCCATCGAGGGCGATCGGGCCATGGGCC
TTAACTCCCTTCCCGTGGCATTCGGGATCGATACTGCCAAATGGATCTGC
GTTGGCACCATTGACGTCACCCAGgtggatgccttccctccctccttccc
tcccttcctcgctcccttcctccttccctttctcactctcattcgtctct
aggaaacttctcgaaattgaagcgtacccaaacatatcgaagctcactga
aatctcgtgttctcctgcttccttcccccccccctcatcctctccccaaa
agCTCGGCGTGGCTGGCTACCTGGCCTACATCGGCGAGACCACCTATGCG
CTCGCCCTGCTCGGCCTGATTTTACCCCAAATCTTCTTCCAATTCAAATA
CTTCTTGAAGGACCCCATCAAATATGATGTCAAGTATCAGgtgcgtacgt
ccctccgtccctccctctcattccttccttccatttttctgttcttgagg
aatattgtggtccataggatgttgtaggtgtgtgttcaatcgacacatag
tcttacaagcgtatacagatctcctgatgacaaattttagctgatggacc
ttagcaagccctccctcttcctattctttcctctgtccttccctctcctt
tccgcgaaacgattggtcaagcacgtactaatcgctcctcttgacttgcc
ctgcttccctcctttgcttcctcaatagGCGAGCGCACAGCCGTTCTTGG
TGCTGGGCATCCTGACGACGGCGCTGGCAGTGGGCCATCACGACTTTTCG
GGCATCTAA
back to top

protein sequence of NO09G00040.1

>NO09G00040.1-protein ID=NO09G00040.1-protein|Name=NO09G00040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=405bp
MRFALPLVLAPTLAVTGFLLPSLPQTRTVTRSSSFLRMALPSLNEEKPAS
FYPFETSLGMKGKGKKDNSEVGSNTARQLLGMKGAAETDDLLKIRIQLMK
PVTWIPLIWGVVCGAAASGNYHWANPLDQANPDAVPLSLGLEDAAKAVTC
MLLAGPLLTGFTQTINDWYDKDIDAINEPYRPIPSGRISEGQVKGQIWGL
LLAGLGLAGVLDLWAGHTEPTILGLSALGSFISYIYSAPPLKLKQSGWIG
NYALGCSYISLPWWCGQAMFGTLNAQVVVLTILYSLAGLGIAIVNDFKSI
EGDRAMGLNSLPVAFGIDTAKWICVGTIDVTQLGVAGYLAYIGETTYALA
LLGLILPQIFFQFKYFLKDPIKYDVKYQASAQPFLVLGILTTALAVGHHD
FSGI*
back to top
Synonyms
Publications