NO09G00030, NO09G00030 (gene) Nannochloropsis oceanica

Overview
NameNO09G00030
Unique NameNO09G00030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3445
Alignment locationchr9:7990..11434 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:7990..11434 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00030.1NO09G00030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00030.1NO09G00030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00030 ID=NO09G00030|Name=NO09G00030|organism=Nannochloropsis oceanica|type=gene|length=3445bp
ATTTATCCCTCGCGCAATGCGTGGAGGGTACGTGGGATTACTGAGGTCCA
CGGTGTCTCTTGCCAGTCCCCTTTTATTCTGTTGAGTCTCCTCTGCGGGG
ATGATAATATATTTCATAAAAACTGACAGAAAAATTGCTTGTCTACTTGT
GGGCGGGCAACATGCTTTGGTGCCCTTGGCTGCCTACGAAACACGCATGG
CAAGCGTGAGACGTCGATTATGGCGGCCAAAACGAGGTCCCTTGACGCAT
TTAATGACGGCCTTAGCAATATGCCGCAGTTGATTTCTTGAAATAAACAT
GAATTGTCTGTTCTTTTCCACACCGTCCAAATAAGGCCTTTACGATGCGA
TCGCTGCAATTTCCGCATCAGGATTTTACCATCTCTTCAGAACGTGCTGT
TTTGTTGCTTCGGACATGCTTTGAGCTCGAAAGATGACCATATGCATATA
AAATCAATAACACTTACCCCGTTCGAGACAGTCAACAACATGAAGCGACC
TTACTTCGCCTTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCATTCC
CAGTTCTTAGCGTTAATTCGCTTCCTCATGTTAACTACCAACGTGCTTCA
CAATGCTTGGTTGGCACCACACCACTGCCAATGTCAGAAGGAATAAAAGA
AGGCGGTGGTGGCAACGAAGCGCAGCAGCGTATGCAGCAGCAACAATTTA
TGCCCCAACACCAGCATCCCCAGCAGAACCAGCAGATGCAACATGGAGCA
GTGGCTCGACAGCTCTGGGTTCAAGACAGCAGAGAAGGAGTAGGAGACAT
CATACCGTTGCTCCGAGGCTGCTATGAAGGCAAGACGCCCATTGATGgta
agaggaagggagggtggaaaaagcgagagtaaaatataaatgcttgatat
atctcgtggtgttctttttctcttttggagaccatacctgtctcatcgtt
tcctcctttcctccttccctcctttccaccttctctctttctagCCCTCT
ACCGCGTTGCAGGCAAACTAGGGCTCAAGGTGGAGCTTATTGAAGGGGAT
TTGGCCTCTCCCTCCGACCCATCGTCCCTCGCTGTTCCTGGTCAGAGGCA
CCAAGGGCAGATGATCTCAATTTTGGTGTATATTGATGGACGACCGTGCT
CGTATGGAACGGCGGgtaagaagcaacgggtgagagaggggaattagatg
gacgaggagaaaaaacggaggaactgaatgggcgtggagtgtggaagaac
gcatacccactcacctctcgtcctatccctctctcccacagCAACCCGCG
GCGCTGCCAAACACATCGCCTCCCTGGAAGCGTTGCGACGTCTTCTCGTC
TTTCTTGTTCATCCCATGCCCTTCGACGACACCCTTCTCGTCTTTCCCTC
GCAAAGTGGCCTCAACAACCCAACCTTTCACCTTCCCGCCCTCCATTCAC
CTGTTCTCCAAGCAATCAGCTATCGACCGATGTCTCCCGTGCCCATGCTC
TCAGCAAATCCTTCATCTCCTTCACCTCCTCGGACACCGAGCACTCAATA
TTTCCCTTCCTTTCACTTGCCTCATGATCGTCCCTCTGTCTCTTTCTCAC
ACGGGACACGGCTGCAGGGTCTTATGATCATTGGCGGGGAAGAAGAGGTC
AAGGAGGACAGTGAGGGAGCACACGGTGGGGGACGGCACTGTCAGCAGCA
GCAACATCAACGACAACATTATCAGCAGCAAAGGCCACAGCAACAACTGC
AGCAGTCTACTCCTTTGCCTTCCGCTCACCAAGACTGGGGAGATGGGACA
CTTAGAGGATGGGGCAGCACTGGTGGAAGCACTGCTTTCCCACCCACCCC
TCCTCCTTCTCCTTCCATACATCGCACACCAGCCTTGCCTTTGATTCCGA
CTGCAGTTCTTGTAGAAGACGAGAGGGAGGAAGGAAAACCAATTCAATGG
CCAGTTGGGACAAAGgtataaagtgataacagagaagaaagaaacgaaaa
ggggaaagagtgtggacggggaagagtgagaaggttacatgtcggctgca
tgtatctagttgcaagtatccaaaattaggttatcacactcggctaaaaa
aaagctctcttgtcccaaaatctttcccccctccgacacagGCACCGATG
CTGGGCGAATCATTTGTGGGCGGCATAGCCGAGGCGACGTTTTTGTTGAA
CAAACTATTGCAGgtaaagagagcagaagtgactttggagggaaccaggg
gcactaggatggaaagagagtgttgaacaatttcgatggcaggatagaaa
tattcccaaaagtaatataatgacgagaatacattcattcccccaactca
atcgtttccattctctttttcgccccttctagGCCTTCAAGTCTCCGTCG
CCTAAGATTACCCATACCGAGATTACCGCACCTGCTCCCTCAAATTCCCC
TTATCATCACAGgcaagtaaaatgaggaaagagcgagggataagtgcgta
ttttctattgaaagtgaaagtggctttagatgcaattaagcgagctcgca
caggtcaattataccacggatgcgcgtacttactcgatgagatatgtgct
gtttatgtttccgtgtcatcattcatcaatctcagcttttcatttctctg
cattatttcctacataaacagGTGCGTGGGTCTCCGGGGGTTTCCCTCCG
TCCTGGGTTATGTCTGTACCGTCGAAGTCCGCCTAGAAGGACCTGCCCTA
CAAGTTGCCACGTTAGTTCGGACCAAGgtatgttttgctcgatcttaccc
catcttttcgtcccacttcttgcatgctagcttgtcattgagcagtgatc
tcaatgtgagaaccacttcggtatctacctatccactcaccttcattcat
cacttttctctcccccataatcagGCGCAAGCCCGATCTAAAAAAGAGTC
ATTGCAACTCGCATCTCGAGCAGTTCTTGCCCATTTGTTCCCAGAGGCTA
CCAGTCTCCACCAGgtaatcttggaagaaatctaacaattaagtgaaaat
tgaatgtaaagaaatgatttcttagattttccttcacatttacgcagGTG
GAAGAGGCTCTTGCGCAGTATCAAGAAACCAAGAAAGAGGGGAGGCGGGA
GATGTATCTCCTCAACAAGAAGgtacatatttattcaatgtttttttatt
atttctattcgtccgcgatacttattatgactccttgacttcttccactc
atttcgccccttgctgctctttcgctcaattcttttcttcagGGTAAAAG
ATTGTCTCGCCAACAAGGCAATTATGGGAACAGATCGATGAATGTGGAAA
GACAGAAGGCGACCTTGGGTCGTGTAGGAAAGAAGGGGATGGAAAAAAAG
GAGATTTCGGTAGAGGAAGGAGATGAGAAGAAAGAAGAACGGTGA
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protein sequence of NO09G00030.1

>NO09G00030.1-protein ID=NO09G00030.1-protein|Name=NO09G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=609bp
MHIKSITLTPFETVNNMKRPYFAFQQQQQQQQQQPFPVLSVNSLPHVNYQ
RASQCLVGTTPLPMSEGIKEGGGGNEAQQRMQQQQFMPQHQHPQQNQQMQ
HGAVARQLWVQDSREGVGDIIPLLRGCYEGKTPIDALYRVAGKLGLKVEL
IEGDLASPSDPSSLAVPGQRHQGQMISILVYIDGRPCSYGTAATRGAAKH
IASLEALRRLLVFLVHPMPFDDTLLVFPSQSGLNNPTFHLPALHSPVLQA
ISYRPMSPVPMLSANPSSPSPPRTPSTQYFPSFHLPHDRPSVSFSHGTRL
QGLMIIGGEEEVKEDSEGAHGGGRHCQQQQHQRQHYQQQRPQQQLQQSTP
LPSAHQDWGDGTLRGWGSTGGSTAFPPTPPPSPSIHRTPALPLIPTAVLV
EDEREEGKPIQWPVGTKAPMLGESFVGGIAEATFLLNKLLQAFKSPSPKI
THTEITAPAPSNSPYHHRCVGLRGFPSVLGYVCTVEVRLEGPALQVATLV
RTKAQARSKKESLQLASRAVLAHLFPEATSLHQVEEALAQYQETKKEGRR
EMYLLNKKGKRLSRQQGNYGNRSMNVERQKATLGRVGKKGMEKKEISVEE
GDEKKEER*
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Synonyms
Publications