NO09G00020, NO09G00020 (gene) Nannochloropsis oceanica

Overview
NameNO09G00020
Unique NameNO09G00020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5482
Alignment locationchr9:2494..7975 -

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Properties
Property NameValue
DescriptionAtp-dependent rna helicase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:2494..7975 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
Homology
BLAST of NO09G00020 vs. NCBI_GenBank
Match: EWM27830.1 (atp-dependent rna helicase [Nannochloropsis gaditana])

HSP 1 Score: 494.2 bits (1271), Expect = 6.300e-136
Identity = 248/299 (82.94%), Postives = 274/299 (91.64%), Query Frame = 0
Query:  284 MTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGE----LIHRVPADSIAEVEKVAKEVSDAVKKR 579
            MTLDEADQLLD KNK+DCERIRGLIE TAPGR+++GT  CRYALFSATYS+++M NVR FVP T KR LIQLDKNEVMVEEIAQLYVDLR E GYDAPR EQQRRKEDF+VALLKERTITGK+VIFVQSKR+CA+LADRLRQLRHLEASEFHGGL+PEERDI+FADFIQGRRNVLVATD+LSRGIDVEGIAWV+NFDMPFQPRVARSDEEG+ TDTGAPETYIHRVGRTGRFGAEGIAVSL+ N +EW LL AIE+DY+ G++AQ G+    LIH+VPADSI EVEKVAK+V+DAVK R
Sbjct:    1 MTLDEADQLLDAKNKIDCERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLR-EQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQVADAVKTR 298          
BLAST of NO09G00020 vs. NCBI_GenBank
Match: GAT44842.1 (predicted protein [Mycena chlorophos])

HSP 1 Score: 229.2 bits (583), Expect = 3.800e-56
Identity = 152/446 (34.08%), Postives = 231/446 (51.79%), Query Frame = 0
Query:  127 DDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMP--FQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKE 571
            + PL+S   F +    + + +L    ++   + SKIQ   LP+ +++P T ++I Q+ SG+GK+AAFV+  L+ +D  K  PQA+ LAP+REL  Q    V  + K    P+    A+ DN A     ++AH+VVGTP T    I+ R LD S V++  LDEAD +LD +         GL + T   ++Q   +  +   FSAT+ + V N    F P+  K   I+L K E+ +  I Q Y+D ++E             K D +V L    TI G+ +IF Q K     +A R+    H  AS  HG   P ERD    +F  GR  VL+ T+++SRGID+  +  VVN+D+P  ++         G   D    ETYIHR+GRTGRFG  GI+++ + +++ W+ +  IEK          G+ I R+    + E+E+  KE
Sbjct:  121 NSPLYSAKTFEE--LGLHDDLLKGIYDMGFTKPSKIQERALPLMLSNPPT-NMIGQSQSGTGKTAAFVLTMLSRVDFSKPQPQALCLAPSRELARQIMSVVVAMGK--FTPVQTEYAIKDNLARDSGPIKAHIVVGTPGTMTDLIRKRILDPSGVKVFVLDEADNMLDQE---------GLGDQTLRVKNQLPREGLQILAFSATFPDHVRNFASKFAPNANK---IELKKEELSISGIRQFYMDCKNEED-----------KYDVLVRLYALLTI-GQSIIFCQHKHTADRIAQRMTAEGHKVAS-LHGAKDPAERDAIIDNFRDGREKVLITTNVISRGIDILQVNMVVNYDLPLMYERNTGAGAGPGGSYDRPDIETYIHRIGRTGRFGRRGISINFVHDKKTWQQMDQIEK--------ATGKTITRIETGDVDEMERKMKE 528          
BLAST of NO09G00020 vs. NCBI_GenBank
Match: XP_018735620.1 (ATP-dependent RNA helicase DBP5 [Sugiyamaella lignohabitans] >ANB13143.1 ATP-dependent RNA helicase DBP5 [Sugiyamaella lignohabitans])

HSP 1 Score: 228.4 bits (581), Expect = 6.400e-56
Identity = 154/451 (34.15%), Postives = 242/451 (53.66%), Query Frame = 0
Query:  127 DDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVD-CERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKEVSDAVK 577
            + PL+S   F D    + E++L     +   + SKIQ   LP+ + +P   ++I Q+ SG+GK+AAF +  L+ +DT+    QA+ L+P RELV Q  D V  + K     +  ALA+PD+      +V AH++VGTP T L  ++ R LD+S +++  LDEAD +LD +   D C+R++ +I+              +  LFSAT+++ V      FVP+  +   I+L   E+ V+ I QLY+D +DE+            K + +V L +  TI G  +IFV+ K     L  ++ +  H + S  H  L+ E+RD    DF  GR  VL+ T++L+RGID+  +  VVN+D+P   R  R+D          P TY+HR+GRTGRFG  G+++S I +R  + +L  I   +  G     G  + +VP D   E+EK+   V+ A+K
Sbjct:  129 NSPLYSVKRFED--LGLSEELLKGLYAMKFSKPSKIQEKALPLLLNNP-PQNLIGQSQSGTGKTAAFALNMLSRVDTKVNKVQALCLSPTRELVRQIMDVVETMGK--FTDITTALAIPDSYE-RNAKVNAHIIVGTPGTVLDLVRRRQLDLSALKVFVLDEADNMLDLQGLGDQCQRVKKMIKPNV-----------QLVLFSATFADEVRVYAEKFVPNANE---IKLKAEELNVDGIKQLYMDCKDEA-----------HKYEVLVGLYELLTI-GSSIIFVRKKETANFLYGKMTKEGH-KVSVLHSDLTTEDRDRLIDDFRDGRSKVLITTNVLARGIDIASVTMVVNYDLP-TDRNGRAD----------PATYLHRIGRTGRFGRTGVSISFIHDRASYNVLQDIIDYFGEG-----GITMTKVPTDDWEEIEKI---VNKAIK 527          
BLAST of NO09G00020 vs. NCBI_GenBank
Match: EIF47680.1 (atp-dependent rna helicase ddx19b [Brettanomyces bruxellensis AWRI1499])

HSP 1 Score: 228.0 bits (580), Expect = 8.400e-56
Identity = 158/446 (35.43%), Postives = 234/446 (52.47%), Query Frame = 0
Query:  127 DDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKN-KVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKEV 572
            + PL+S   F D    + E +L     +   + SKIQ   LP+ + +P   ++IAQ+ SG+GK+AAF +  L+ +D  K CPQAI L+P REL  Q  + + ++ K     +   L +P + A    R+ A ++VGTP   L   +  S+DVS V+I  LDEAD +LD +     C R +  +            K  + ALFSAT+ E V    + FVP+      ++L + E+ V+ I QLY+D   E             K + +  L    TI   I IFVQ K     L  R++   H   S  HGGL PE+RD    DF +GR  VL+ T++L+RGID+  ++ VVN+DMP+       D+ G       PETY+HR+GRTGRFG  G+++S I +++ ++ L  I   Y  GL+      + RVP+D   EVEK+ K+V
Sbjct:   91 NSPLYSVKSFED--LGLTEGLLKGLYAMKFSKPSKIQEKALPLLLANP-PKNLIAQSQSGTGKTAAFALSMLSRVDENKKCPQAICLSPARELARQTLEVIEEMGK--YTGISYQLVVPGSTA-REERINAQILVGTPGAILGLTKRGSIDVSAVKIFVLDEADNMLDQQGLGSQCLRYKNSL-----------PKQVQIALFSATFPEKVNKYAKRFVPNAN---TLELKQEELNVKAIKQLYMDCDSEG-----------HKFECLCELYGLLTIASSI-IFVQRKITADKLYIRMKNEGH-AVSVLHGGLVPEDRDRLIDDFREGRSKVLITTNVLARGIDIPSVSMVVNYDMPY-------DKNGK----PDPETYLHRIGRTGRFGRTGVSISFIHDKKSYECLKYI-AHYFGGLE------LTRVPSDDWDEVEKIVKKV 485          
BLAST of NO09G00020 vs. NCBI_GenBank
Match: SCU77759.1 (LADA_0A02080g1_1 [Lachancea dasiensis CBS 10888])

HSP 1 Score: 227.6 bits (579), Expect = 1.100e-55
Identity = 155/446 (34.75%), Postives = 243/446 (54.48%), Query Frame = 0
Query:  127 DDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVD-CERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKEV 572
            + PL+S   F +    +  ++L     +  ++ SKIQ   LP+ + DP   ++IAQ+ SG+GK+AAF +  L+ +D  +   QAI LAP+REL  Q  + V+++ K     +   L +PD+     + + A V+VGTP T L  ++ +++ +  V++  LDEAD +LD +   D C R++  +            K  +  LFSAT+ +SV N  R  VP+      ++L KNEV V  I QL++D  DE+            K + +  L    TI G  +IFVQ+K+    L  +L+Q  H + S  HG L   ERD    DF +GR  VL+ T++L+RGID+  ++ VVN+D+P   +  ++D          P TYIHR+GRTGRFG  G+A+S + +R+ +++L AI+K +       D E+  RVP D   EVEK+ K+V
Sbjct:   81 NSPLYSIKSFEE--LGLAPELLKGLYAMKFQKPSKIQERALPLLLNDPPR-NMIAQSQSGTGKTAAFSLTMLSRVDVAQPATQAICLAPSRELARQTLEVVQEMGK--FTKVTSQLIVPDSFE-KNKPIAAQVIVGTPGTVLDLMRRKAIQLGQVKVFVLDEADNMLDKQGLGDQCLRVKKFL-----------PKATQLVLFSATFDDSVRNYARKVVPNANS---LELQKNEVNVSAIKQLFMDCTDEN-----------NKYEVLTELYGLLTI-GSSIIFVQTKQTANVLYAKLKQEGH-QVSILHGDLQSSERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTTVQ-GKAD----------PSTYIHRIGRTGRFGRTGVAISFVHDRKSFEVLTAIQKYFG------DIEMT-RVPTDDWDEVEKIVKKV 475          
BLAST of NO09G00020 vs. NCBI_GenBank
Match: GAT44840.1 (predicted protein [Mycena chlorophos])

HSP 1 Score: 226.5 bits (576), Expect = 2.500e-55
Identity = 148/428 (34.58%), Postives = 223/428 (52.10%), Query Frame = 0
Query:  145 EQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMP--FQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKE 571
            + +L    ++   + SKIQ   LP+ +++P T ++I Q+ SG+GK+AAFV+  L+ +D  K  PQA+ LAP+REL  Q    V  + K    P+    A+ DN A     ++AH+VVGTP T    I+ R LD S V++  LDEAD +LD +         GL + T   ++Q   +  +   FSAT+ + V N    F P+  K   I+L K E+ +  I Q Y+D ++E             K D +V L    TI G+ +IF Q K     +A R+    H  AS  HG   P ERD    +F  GR  VL+ T+++SRGID+  +  VVN+D+P  ++         G   D    ETYIHR+GRTGRFG  GI+++ + +++ W+ +  IEK          G+ I R+    + E+E+  KE
Sbjct:   83 DDLLKGIYDMGFTKPSKIQERALPLMLSNPPT-NMIGQSQSGTGKTAAFVLTMLSRVDFSKPQPQALCLAPSRELARQIMSVVVAMGK--FTPVQTEYAIKDNLARDSGPIKAHIVVGTPGTMTDLIRKRILDPSGVKVFVLDEADNMLDQE---------GLGDQTLRVKNQLPREGLQILAFSATFPDHVRNFASKFAPNANK---IELKKEELSISGIRQFYMDCKNEED-----------KYDVLVRLYALLTI-GQSIIFCQHKHTADRIAQRMTAEGHKVAS-LHGAKDPAERDAIIDNFRDGREKVLITTNVISRGIDILQVNMVVNYDLPLMYERNTGAGAGPGGSYDRPDIETYIHRIGRTGRFGRRGISINFVHDKKTWQQMDQIEK--------ATGKTITRIETGDVDEMERKMKE 474          
BLAST of NO09G00020 vs. NCBI_GenBank
Match: GAT44841.1 (predicted protein [Mycena chlorophos])

HSP 1 Score: 226.5 bits (576), Expect = 2.500e-55
Identity = 148/428 (34.58%), Postives = 223/428 (52.10%), Query Frame = 0
Query:  145 EQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMP--FQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKE 571
            + +L    ++   + SKIQ   LP+ +++P T ++I Q+ SG+GK+AAFV+  L+ +D  K  PQA+ LAP+REL  Q    V  + K    P+    A+ DN A     ++AH+VVGTP T    I+ R LD S V++  LDEAD +LD +         GL + T   ++Q   +  +   FSAT+ + V N    F P+  K   I+L K E+ +  I Q Y+D ++E             K D +V L    TI G+ +IF Q K     +A R+    H  AS  HG   P ERD    +F  GR  VL+ T+++SRGID+  +  VVN+D+P  ++         G   D    ETYIHR+GRTGRFG  GI+++ + +++ W+ +  IEK          G+ I R+    + E+E+  KE
Sbjct:  153 DDLLKGIYDMGFTKPSKIQERALPLMLSNPPT-NMIGQSQSGTGKTAAFVLTMLSRVDFSKPQPQALCLAPSRELARQIMSVVVAMGK--FTPVQTEYAIKDNLARDSGPIKAHIVVGTPGTMTDLIRKRILDPSGVKVFVLDEADNMLDQE---------GLGDQTLRVKNQLPREGLQILAFSATFPDHVRNFASKFAPNANK---IELKKEELSISGIRQFYMDCKNEED-----------KYDVLVRLYALLTI-GQSIIFCQHKHTADRIAQRMTAEGHKVAS-LHGAKDPAERDAIIDNFRDGREKVLITTNVISRGIDILQVNMVVNYDLPLMYERNTGAGAGPGGSYDRPDIETYIHRIGRTGRFGRRGISINFVHDKKTWQQMDQIEK--------ATGKTITRIETGDVDEMERKMKE 544          
BLAST of NO09G00020 vs. NCBI_GenBank
Match: GAT44843.1 (predicted protein [Mycena chlorophos])

HSP 1 Score: 226.5 bits (576), Expect = 2.500e-55
Identity = 148/428 (34.58%), Postives = 223/428 (52.10%), Query Frame = 0
Query:  145 EQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMP--FQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKE 571
            + +L    ++   + SKIQ   LP+ +++P T ++I Q+ SG+GK+AAFV+  L+ +D  K  PQA+ LAP+REL  Q    V  + K    P+    A+ DN A     ++AH+VVGTP T    I+ R LD S V++  LDEAD +LD +         GL + T   ++Q   +  +   FSAT+ + V N    F P+  K   I+L K E+ +  I Q Y+D ++E             K D +V L    TI G+ +IF Q K     +A R+    H  AS  HG   P ERD    +F  GR  VL+ T+++SRGID+  +  VVN+D+P  ++         G   D    ETYIHR+GRTGRFG  GI+++ + +++ W+ +  IEK          G+ I R+    + E+E+  KE
Sbjct:   83 DDLLKGIYDMGFTKPSKIQERALPLMLSNPPT-NMIGQSQSGTGKTAAFVLTMLSRVDFSKPQPQALCLAPSRELARQIMSVVVAMGK--FTPVQTEYAIKDNLARDSGPIKAHIVVGTPGTMTDLIRKRILDPSGVKVFVLDEADNMLDQE---------GLGDQTLRVKNQLPREGLQILAFSATFPDHVRNFASKFAPNANK---IELKKEELSISGIRQFYMDCKNEED-----------KYDVLVRLYALLTI-GQSIIFCQHKHTADRIAQRMTAEGHKVAS-LHGAKDPAERDAIIDNFRDGREKVLITTNVISRGIDILQVNMVVNYDLPLMYERNTGAGAGPGGSYDRPDIETYIHRIGRTGRFGRRGISINFVHDKKTWQQMDQIEK--------ATGKTITRIETGDVDEMERKMKE 474          
BLAST of NO09G00020 vs. NCBI_GenBank
Match: PCH42042.1 (ATP-dependent RNA helicase DBP5 [Wolfiporia cocos MD-104 SS10])

HSP 1 Score: 225.7 bits (574), Expect = 4.200e-55
Identity = 151/427 (35.36%), Postives = 227/427 (53.16%), Query Frame = 0
Query:  119 EVVATMSE-----DDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMP-FQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEK 540
            EV  T+++     + PL+S   F      + E +L    ++   + SKIQ   LP+ + +P   ++I Q+ SG+GK+AAFV+  L+ ID  K  PQAI LAP+REL  Q    V  + K    P+    A+ D      +RV AHV+VGTP T +  I+ + LDVS V++  LDEAD +LD           GL E T   ++       +  LFSAT+ + V N    F P+  K   I+L +NE+ V+ I Q Y+D R+E           + K D +V+L +  TI G+ +IF + +     +A R+    H  AS  HG     ERD     F +GR  VL+ T++++RGID+  +  VVN+D+P    R   +++E    D    ETYIHR+GRTGRFG +GI+++ + +R  W+ +  IEK
Sbjct:   40 EVSVTLADQQADPNSPLYSAKTFEQ--LGLHEDLLKGIYDMGFSKPSKIQERALPLMLANP-PQNMIGQSQSGTGKTAAFVLTMLSRIDFSKPKPQAICLAPSRELARQTMSVVVAMGK--FTPVQTEYAIKDAIPRGTQRVDAHVIVGTPGTAIDLIRRKVLDVSEVKVFVLDEADNMLDQD---------GLGEQTLRVKNMLPRNTVQIILFSATFPDHVRNFANKFAPNANK---IELQRNELSVDNIRQFYMDCRNE-----------QHKYDVLVSLYQLLTI-GQSIIFCKQRSTADRIAQRMTAEGHKVAS-LHGAKDAAERDAIIDGFREGRDKVLITTNVIARGIDILQVNMVVNYDLPLLNERDNWNNKEDQLPDI---ETYIHRIGRTGRFGRKGISINFVHDRTTWEQMEQIEK 433          
BLAST of NO09G00020 vs. NCBI_GenBank
Match: XP_001551325.2 (Bcdbp5 [Botrytis cinerea B05.10] >CCD44156.1 similar to ATP-dependent RNA helicase dbp5 [Botrytis cinerea T4] >EMR87108.1 putative atp-dependent rna helicase dbp5 protein [Botrytis cinerea BcDW1] >ATZ57140.1 Bcdbp5 [Botrytis cinerea B05.10])

HSP 1 Score: 225.3 bits (573), Expect = 5.500e-55
Identity = 157/448 (35.04%), Postives = 241/448 (53.79%), Query Frame = 0
Query:  126 EDDPLHSGVEFSDPTAAIPEQILAAAAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLALIDTEK-TCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAFTRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVD-CERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGELIHRVPADSIAEVEKVAKEV 572
            E  PL+S   F      I   IL     +N ++ SKIQ   LP+ + +P T ++IAQ+ SG+GK+AAFVI  L+ +D  K T PQA+ LAP+REL  Q    +R +  + V  L V  A+P  A     +V A VVVGTP T +  I+ RS+D S ++I+ LDEAD +LD +   D C R++ +I               +  LFSAT+ + V    + F P   +   I+L ++E+ V  I Q+++D  +E G           K + +V L    TI G  +IFV+ +   +++A+RL +  H + +  HG     ERD    DF QG+  VL+ T++L+RGIDV+ ++ V+N+D+P +    RSD E        PETY+HR+GRTGRFG  G+++S + +R+ +  L  I   Y+  L         ++  D   E E++ K+V
Sbjct:   61 ETSPLYSVETFEQ--LGIDASILKGLYAMNFKKPSKIQEKALPLLLRNPPT-NMIAQSQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVIRSIG-QFVDGLTVQAAIP-GAVERNAKVNAMVVVGTPGTVMDLIKRRSIDASQMKILCLDEADNMLDQQGLGDQCMRVKSMIRVE------------QILLFSATFPDEVYGFAQDFSPRANE---IKLKRDELTVSGIKQMFMDCPNEVG-----------KYEILVKLYGLMTI-GSSIIFVKRRDTASNIAERLTKEGH-KVAAVHGAFEGSERDQVLEDFRQGKAKVLITTNVLARGIDVQSVSMVINYDVPMK---GRSDSEPD------PETYLHRIGRTGRFGRVGVSISFVFDRKSYDALNQIANHYNIDL--------IKLNQDDWDETEEIVKKV 458          
The following BLAST results are available for this feature:
BLAST of NO09G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27830.16.300e-13682.94atp-dependent rna helicase [Nannochloropsis gadita... [more]
GAT44842.13.800e-5634.08predicted protein [Mycena chlorophos][more]
XP_018735620.16.400e-5634.15ATP-dependent RNA helicase DBP5 [Sugiyamaella lign... [more]
EIF47680.18.400e-5635.43atp-dependent rna helicase ddx19b [Brettanomyces b... [more]
SCU77759.11.100e-5534.75LADA_0A02080g1_1 [Lachancea dasiensis CBS 10888][more]
GAT44840.12.500e-5534.58predicted protein [Mycena chlorophos][more]
GAT44841.12.500e-5534.58predicted protein [Mycena chlorophos][more]
GAT44843.12.500e-5534.58predicted protein [Mycena chlorophos][more]
PCH42042.14.200e-5535.36ATP-dependent RNA helicase DBP5 [Wolfiporia cocos ... [more]
XP_001551325.25.500e-5535.04Bcdbp5 [Botrytis cinerea B05.10] >CCD44156.1 simil... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00020.1NO09G00020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100074g18gene2731Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00020.1NO09G00020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00020 ID=NO09G00020|Name=NO09G00020|organism=Nannochloropsis oceanica|type=gene|length=5482bp
CTTTGATTTCCCTCTCTCGACCCCCCCCCTGCAAGTAGAGGTAGATCAAC
AGGGGCAGCACACATAGTGTCTCTGCATGTGTATGGGACTAGTGTCACTG
TGTTGTGAGATGGCAGACTCCAAAACGTCACAGCCTTTCTCATCCTTGCC
GCAACAACACCATCGTCATGGCTCTCATCATGTCTCGCCTCATTTTGTTC
CGTCACACCCCTCGCACACAAATCAGACACATCGTCCACACAGCCATGTC
GTCCCCTCCCCGAAACGATACGGGAGGGTGGGGTGCTTCGTCCAACCACG
CACATGCGACCTTGGCGCCGCCTCCTCCTCTAGCTCCTTCTGAGCCCTTT
CCTGCCGCCCCCGGGGCACCGCCTCCGATGATGCAGTCACGATATGGCGG
GGGCGGTGGCGGAGCGCGGGAGAGGCATCGGCCCAAGTACAAGGAGCGGG
AGCTGGAGGAGTCGTTCAAGGACTCGTGCCGGATTCACTTGCCGAGCAAG
AGAGgtatgtgtgggtgcggtggtgggaggaaagcgagggaaagaacgag
aaaagggagcgagggaagatgggaggaggtggaagaataagccgtccacc
cgtggacaagataaaggcggctgatttaagatgcagtgcagcgtccatct
attagacgccgatgcacggccgtcacctgccttttcccggtgctcctcac
aaattttaagtctcaccaccatcccctttcgtccacaacacacgctcaca
cctacccacacacacctacccaccttcccacacacgtcgtcaacgcagAC
AAGGCTGTAGACGGGGAGGTGGTGGCGACAATGTCTGAAGACGATCCGCT
GCACAGCGGCGTCGAGTTTTCGGACCCAACCGCCGCCATCCCGGAGCAGg
tgcggagggagggagggagggagaggtaaacaaagtgggtttccctcttt
ttttccccttactcattttatacttttcgtatgatcctggcagcagatgt
tgtcgatctgaacctgcaggagaatcagcaggattcagattcctttcacc
taccccctcttctttcctcccttcctccctctcagATCTTGGCAGCGGCC
GCCGAGCTGAATCTGGAGGAGATGAGCAAGATTCAGCACTTGACCCTTCC
GATGTTCATCACGGATCCGGAGACTCCGCATATTATTGCGCAGgtaaaga
gggagggaaagagagaaaggggcagggagggagggagggaggaagggagg
ctaaatgcagcgcaaattgcccttatcacgtcccgtctcgccctccttct
cttcctctcccttttctccctcccacttcctccctcagGCCAACTCCGGG
AGTGGGAAAAGCGCCGCCTTCGTCATCGGCACCCTCGCTTTAATAGACAC
CGAAAAGACCTGCCCCCAGGCCATCATCCTCGCTCCCAACCGAGAGCTCG
TCCTCCAGgtatgcttctcccctccctccctccctccctccctccctccc
tccctccttccctccctcggaccctcttccccgtgtgcaagatatggcgt
gtacttttattcacaaggccccatccactcctccctccctccctccctcc
ctccatgtctcactgccttttccccttcccttcctaaccctcagcatccg
gcgtctcctcagaggtcatgaccacctctgaccctcccaccctccctccc
tccctccctctcttcttccagGCCTACGATTGGGTTCGACAGCTTTCCAA
GCGCATGGTTCCTCCCCTCGACGTCGCCCTGGCCCTGCCTGACAACGCCG
CCTTCACACGTCGGCGGGTGCAGgtaggtagatccagggcgggaacgagg
ggggaaaggagggaagaagggaagttgtgtcactgtcaagtacctctacc
tacgggaggaaaaaagggagagagggagggagggagagagggagggaggg
aagctggtaaggacgcctgtggattgctcagcttagatcttcccctcctt
ccccccttccatgctttatcatgatcacgttgtcttttctttctatagGC
CCATGTGGTGGTGGGCACGCCGGCGACGACCCTGCGCGGCATCCAGAACC
GGAGTCTCGACgtgagtccctccctgcctccctcccttcctccctccctc
cctccttcctgctcttgttttctcgatatggctcttcaacatccctgcct
cccttccaccctccctccctccctctctccctgcctcccttgcaccctcc
ctccctctctctctgcctgcttctcccacaaccccgtctccaggaggcca
accagcgccttcttattcccaacttgtcctccttcccttcctccctcccc
ccctccttcccagGTCTCCCACGTCCGCATCATGACTCTCGACGAGGCGG
ACCAGCTTCTGGACCCCAAGAATAAAGTCGACTGCGAGAGGATTCGAGGg
tagggagagagcgaggaagcgagggagggatggtgggaaaagatgagaca
agaaaaggagggagcgagggagggtgggaagtacgatgtccaccgacggg
tatttctgacatgcccacgacacacagGTTGATTGAAGCGACTGCGCCCG
GACGCTCTCAGACAGGAACCAAGCCCTGCCGgtaggtctcttgcctcctc
gtcctacctctccctctccctccctccttccttccctccctttctccctc
cggtttgggcccccatcccttcctccctccctccttcctttcttccttcc
ctccctccctagGTACGCCCTCTTCTCCGCCACCTACTCCGAGAGCGTGA
TGAACAACGTCAGGGCCTTTGTGCCGCACACCTACAAGCGCTGCTTGATC
CAGTTGGACAAGAACGAGgcaagaagggaggaagggaaaggtgggaggga
gcgacggagggagcgacggagggattgttgatgtagttgactgtctacgt
ttccatagatttccatgtcctctcctccatttgttgcatttcctcaacct
cttccctctttccctccctcccctcttcttttccccccaactcttgacac
acctcgcctactcacactcctctgtttcacccctccctccctccctccct
ccctccattcatccctcccgcagGTGATGGTAGAGGAAATCGCCCAGCTC
TACGTGGACTTGAGAGACGAGAGCGGGTATGACGCTCCTCGGCATGAGCA
GCAACGCCGCAAGgtgggcagggagggagcgagcgagagcagccaaagag
tggagggagggaaagaggaatggcgggttcggatgtcatcatacgtgaat
gtgactgcacccattacataacacacagGAGGACTTCGTCGTGGCCTTGC
TCAAGGAGCGGACCATCACCGGCAAGgtaggcacgccccttccctccccc
cctccctcctcttgctcccctccctcttcttgctccgcccacgcgcccac
ccttctccccctccctccccctcttccccagATCGTCATCTTCGTCCAGT
CCAAGCGGAACTGCGCCTCTCTCGCCGACCGCCTCCGACAGCTGCGGCAT
TTGGAGGCCTCGGAATTTCACGGCGGCTTGAGCCCCGAAGgtggatttct
tcccccctccttttgttcctccctccctcctcctttttcttctttgtgtt
ccttctttcctccatccctcgcggaatagatgcctccttcctttcctccc
tctcttttttccacccccctggcatgaattgtttatcaagtcatcccttc
ctctttccctcccccttcccttccccaatccctccctttcttccctccct
ccctcccgtctctctttagAGCGCGACATTTATTTTGCTGACTTTATCCA
GGGGCGTCGAAATGTGCTGGTTGCCACCGACTTGCTCTCCCGGGGCATTG
ACGTGGAAGgtagggagggagatacggagggagggagggagggagatacg
gagggagggagggagggagataaaaggattagaagcaacagacggaatga
cgttggcctgaggtggcagaagaatcactgacagtagagaagagggtttt
gttgccacatcccgacgtccctccctccttccttccactcctacctaccc
acctctctacctacctagGCATAGCGTGGGTCGTGAATTTTGACATGCCT
TTCCAACCGCGCGTGGCCCGGAGTGACGAGGAGGGGAGCTTCACGGATAC
GGGgtaaggagggagggaggaagggtaaaagataaggagggagggagggt
caaggagggagggattccaccacgttcttccacagagcaagaaaggaatg
cacccctcgcgaatagtcgtacatctcatgcaagtgatcatacacgatat
gcgaattaccatacatctagtgcattcaatccaaataattatacatccca
tgcgatcactcatacaccaccagGGCCCCTGAGACTTACATCCATCGCGT
CGGTCGCACTGGCCGCTTCGGCGCGGAGGGAATCGCCGTCTCCTTGATCG
GCAACAGGGAGgtacacccccgtctccctccttttgatttctgcttcctt
ccctactctccttgctcactttttcctgatttcttgttgtgcatgacctc
atggcctcgtcctccttttcttccgctctgattcctctcctctcctcttc
ctcctttccatggatcctgccttgtcatctcaccgcctcgtcctcccttc
ctccctccctccttccctcccagGAATGGAAGCTCCTGGGGGCCATCGAG
AAGGACTATTCCTCGGGCTTGCAGGCACAGGACGgtaaggagggagggag
cgagggaggaaaagaagacggaacagggagcacaacttttttggcttgtg
ttgagactaggaaggaagggacgaagggacagggagagggaaggagaatg
gcgcgtcacggattagtcatgccttcaccatcaccactttgcttctcacc
cttctcgctcctttcttcatcctcttcctggcagGCGAGCTCATTCACCG
CGTGCCTGCCGACTCCATCGCCGAGGTCGAAAAGgttcgtcccctgccct
tcctttctccccccccttttccttttccttcgttcctattttgttggacc
ttcaaagctagcaaatccaaccttttctctcccttgcactttccctttct
ccctccctccttaccaccctccttctctctctcctaccctccctcagGTT
GCCAAGGAAGTATCCGACGCCGTCAAGAAGCGCCGATCCGACCGCCTCGC
TTTGGAGGCCGCGGAGGAGTTGGAGAAAGAGGCGGAAAAAGAAGCAGCAG
AAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGTAGCA
GCAGAAGCAACAGCTGCCGCTGATTTATCCGAAACATCAACAAAGGGAGT
GGAGAAAGCTAAAGAGGACAAGGAGGAGGGGGAGAACGGGAATGGCGGCG
GAGAGGAGAAGAAAGAGGGAGGAGATGAATGA
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protein sequence of NO09G00020.1

>NO09G00020.1-protein ID=NO09G00020.1-protein|Name=NO09G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=661bp
MALIMSRLILFRHTPRTQIRHIVHTAMSSPPRNDTGGWGASSNHAHATLA
PPPPLAPSEPFPAAPGAPPPMMQSRYGGGGGGARERHRPKYKERELEESF
KDSCRIHLPSKRDKAVDGEVVATMSEDDPLHSGVEFSDPTAAIPEQILAA
AAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLAL
IDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAF
TRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVD
CERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKR
CLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKER
TITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADF
IQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTG
APETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDG
ELIHRVPADSIAEVEKVAKEVSDAVKKRRSDRLALEAAEELEKEAEKEAA
EVAAAAAAAAAAAAVVAAEATAAADLSETSTKGVEKAKEDKEEGENGNGG
GEEKKEGGDE*
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Synonyms
Publications