NO09G00020.1, NO09G00020.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G00020.1
Unique Name	NO09G00020.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2150
Alignment location	chr9:2494..7975 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:2494..7975 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO09G00020.1 vs.
Match: EWM27830.1 (atp-dependent rna helicase [Nannochloropsis gaditana])

HSP 1 Score: 509.6 bits (1311), Expect = 1.400e-140
Identity = 281/364 (77.20%), Postives = 314/364 (86.26%), Query Frame = 0

Query:  284 MTLDEADQLLDPKNKVDCERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKRCLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKERTITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADFIQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTGAPETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDGE----LIHRVPADSIAEVEKVAKEVSDAVKKRRSDRLALEAAEELE---KEAEKEAAEVAAAAAAAAAAAAVVAAEATAAADLSETSTKGVEKAKED 641
            MTLDEADQLLD KNK+DCERIRGLIE TAPGR+++GT  CRYALFSATYS+++M NVR FVP T KR LIQLDKNEVMVEEIAQLYVDLR E GYDAPR EQQRRKEDF+VALLKERTITGK+VIFVQSKR+CA+LADRLRQLRHLEASEFHGGL+PEERDI+FADFIQGRRNVLVATD+LSRGIDVEGIAWV+NFDMPFQPRVARSDEEG+ TDTGAPETYIHRVGRTGRFGAEGIAVSL+ N +EW LL AIE+DY+ G++AQ G+    LIH+VPADSI EVEKVAK+V+DAVK RR++RLA EAAEE E   KEAEKEAA   AA AAAA+   V A E       SE + KG  +AK++
Sbjct:    1 MTLDEADQLLDAKNKIDCERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLR-EQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQVADAVKTRRAERLAAEAAEEKEQEKKEAEKEAA--TAATAAAASGGPVTAGEG------SENAGKGKIRAKKE 355

The following BLAST results are available for this feature:

BLAST of NO09G00020.1 vs.

BLAST of NO09G00020.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27830.1	1.400e-140	77.20	atp-dependent rna helicase [Nannochloropsis gadita...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO09G00020	NO09G00020	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO09G00020.1	NO09G00020.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO09G00020.1.cds1	NO09G00020.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds2	NO09G00020.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds3	NO09G00020.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds4	NO09G00020.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds5	NO09G00020.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds6	NO09G00020.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds7	NO09G00020.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds8	NO09G00020.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds9	NO09G00020.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds10	NO09G00020.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds11	NO09G00020.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds12	NO09G00020.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds13	NO09G00020.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds14	NO09G00020.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds15	NO09G00020.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds16	NO09G00020.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds17	NO09G00020.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00020.1.cds18	NO09G00020.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr9:2494..7975-
coding sequence from alignment at chr9:2494..7975-

mRNA sequence

>NO09G00020.1 ID=NO09G00020.1|Name=NO09G00020.1|organism=Nannochloropsis oceanica|type=mRNA|length=2150bp
CTTTGATTTCCCTCTCTCGACCCCCCCCCTGCAAGTAGAGGTAGATCAAC
AGGGGCAGCACACATAGTGTCTCTGCATGTGTATGGGACTAGTGTCACTG
TGTTGTGAGATGGCAGACTCCAAAACGTCACAGCCTTTCTCATCCTTGCC
GCAACAACACCATCGTCATGGCTCTCATCATGTCTCGCCTCATTTTGTTC
CGTCACACCCCTCGCACACAAATCAGACACATCGTCCACACAGCCATGTC
GTCCCCTCCCCGAAACGATACGGGAGGGTGGGGTGCTTCGTCCAACCACG
CACATGCGACCTTGGCGCCGCCTCCTCCTCTAGCTCCTTCTGAGCCCTTT
CCTGCCGCCCCCGGGGCACCGCCTCCGATGATGCAGTCACGATATGGCGG
GGGCGGTGGCGGAGCGCGGGAGAGGCATCGGCCCAAGTACAAGGAGCGGG
AGCTGGAGGAGTCGTTCAAGGACTCGTGCCGGATTCACTTGCCGAGCAAG
AGAGACAAGGCTGTAGACGGGGAGGTGGTGGCGACAATGTCTGAAGACGA
TCCGCTGCACAGCGGCGTCGAGTTTTCGGACCCAACCGCCGCCATCCCGG
AGCAGATCTTGGCAGCGGCCGCCGAGCTGAATCTGGAGGAGATGAGCAAG
ATTCAGCACTTGACCCTTCCGATGTTCATCACGGATCCGGAGACTCCGCA
TATTATTGCGCAGGCCAACTCCGGGAGTGGGAAAAGCGCCGCCTTCGTCA
TCGGCACCCTCGCTTTAATAGACACCGAAAAGACCTGCCCCCAGGCCATC
ATCCTCGCTCCCAACCGAGAGCTCGTCCTCCAGGCCTACGATTGGGTTCG
ACAGCTTTCCAAGCGCATGGTTCCTCCCCTCGACGTCGCCCTGGCCCTGC
CTGACAACGCCGCCTTCACACGTCGGCGGGTGCAGGCCCATGTGGTGGTG
GGCACGCCGGCGACGACCCTGCGCGGCATCCAGAACCGGAGTCTCGACGT
CTCCCACGTCCGCATCATGACTCTCGACGAGGCGGACCAGCTTCTGGACC
CCAAGAATAAAGTCGACTGCGAGAGGATTCGAGGGTTGATTGAAGCGACT
GCGCCCGGACGCTCTCAGACAGGAACCAAGCCCTGCCGGTACGCCCTCTT
CTCCGCCACCTACTCCGAGAGCGTGATGAACAACGTCAGGGCCTTTGTGC
CGCACACCTACAAGCGCTGCTTGATCCAGTTGGACAAGAACGAGGTGATG
GTAGAGGAAATCGCCCAGCTCTACGTGGACTTGAGAGACGAGAGCGGGTA
TGACGCTCCTCGGCATGAGCAGCAACGCCGCAAGGAGGACTTCGTCGTGG
CCTTGCTCAAGGAGCGGACCATCACCGGCAAGATCGTCATCTTCGTCCAG
TCCAAGCGGAACTGCGCCTCTCTCGCCGACCGCCTCCGACAGCTGCGGCA
TTTGGAGGCCTCGGAATTTCACGGCGGCTTGAGCCCCGAAGAGCGCGACA
TTTATTTTGCTGACTTTATCCAGGGGCGTCGAAATGTGCTGGTTGCCACC
GACTTGCTCTCCCGGGGCATTGACGTGGAAGGCATAGCGTGGGTCGTGAA
TTTTGACATGCCTTTCCAACCGCGCGTGGCCCGGAGTGACGAGGAGGGGA
GCTTCACGGATACGGGGGCCCCTGAGACTTACATCCATCGCGTCGGTCGC
ACTGGCCGCTTCGGCGCGGAGGGAATCGCCGTCTCCTTGATCGGCAACAG
GGAGGAATGGAAGCTCCTGGGGGCCATCGAGAAGGACTATTCCTCGGGCT
TGCAGGCACAGGACGGCGAGCTCATTCACCGCGTGCCTGCCGACTCCATC
GCCGAGGTCGAAAAGGTTGCCAAGGAAGTATCCGACGCCGTCAAGAAGCG
CCGATCCGACCGCCTCGCTTTGGAGGCCGCGGAGGAGTTGGAGAAAGAGG
CGGAAAAAGAAGCAGCAGAAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGTAGTAGCAGCAGAAGCAACAGCTGCCGCTGATTTATCCGA
AACATCAACAAAGGGAGTGGAGAAAGCTAAAGAGGACAAGGAGGAGGGGG
AGAACGGGAATGGCGGCGGAGAGGAGAAGAAAGAGGGAGGAGATGAATGA

protein sequence of NO09G00020.1

>NO09G00020.1-protein ID=NO09G00020.1-protein|Name=NO09G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=661bp
MALIMSRLILFRHTPRTQIRHIVHTAMSSPPRNDTGGWGASSNHAHATLA
PPPPLAPSEPFPAAPGAPPPMMQSRYGGGGGGARERHRPKYKERELEESF
KDSCRIHLPSKRDKAVDGEVVATMSEDDPLHSGVEFSDPTAAIPEQILAA
AAELNLEEMSKIQHLTLPMFITDPETPHIIAQANSGSGKSAAFVIGTLAL
IDTEKTCPQAIILAPNRELVLQAYDWVRQLSKRMVPPLDVALALPDNAAF
TRRRVQAHVVVGTPATTLRGIQNRSLDVSHVRIMTLDEADQLLDPKNKVD
CERIRGLIEATAPGRSQTGTKPCRYALFSATYSESVMNNVRAFVPHTYKR
CLIQLDKNEVMVEEIAQLYVDLRDESGYDAPRHEQQRRKEDFVVALLKER
TITGKIVIFVQSKRNCASLADRLRQLRHLEASEFHGGLSPEERDIYFADF
IQGRRNVLVATDLLSRGIDVEGIAWVVNFDMPFQPRVARSDEEGSFTDTG
APETYIHRVGRTGRFGAEGIAVSLIGNREEWKLLGAIEKDYSSGLQAQDG
ELIHRVPADSIAEVEKVAKEVSDAVKKRRSDRLALEAAEELEKEAEKEAA
EVAAAAAAAAAAAAVVAAEATAAADLSETSTKGVEKAKEDKEEGENGNGG
GEEKKEGGDE*

mRNA from alignment at chr9:2494..7975-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO09G00020.1 ID=NO09G00020.1|Name=NO09G00020.1|organism=Nannochloropsis oceanica|type=mRNA|length=5482bp|location=Sequence derived from alignment at chr9:2494..7975- (Nannochloropsis oceanica)
CTTTGATTTCCCTCTCTCGACCCCCCCCCTGCAAGTAGAGGTAGATCAAC
AGGGGCAGCACACATAGTGTCTCTGCATGTGTATGGGACTAGTGTCACTG
TGTTGTGAGATGGCAGACTCCAAAACGTCACAGCCTTTCTCATCCTTGCC
GCAACAACACCATCGTCATGGCTCTCATCATGTCTCGCCTCATTTTGTTC
CGTCACACCCCTCGCACACAAATCAGACACATCGTCCACACAGCCATGTC
GTCCCCTCCCCGAAACGATACGGGAGGGTGGGGTGCTTCGTCCAACCACG
CACATGCGACCTTGGCGCCGCCTCCTCCTCTAGCTCCTTCTGAGCCCTTT
CCTGCCGCCCCCGGGGCACCGCCTCCGATGATGCAGTCACGATATGGCGG
GGGCGGTGGCGGAGCGCGGGAGAGGCATCGGCCCAAGTACAAGGAGCGGG
AGCTGGAGGAGTCGTTCAAGGACTCGTGCCGGATTCACTTGCCGAGCAAG
AGAGGTATGTGTGGGTGCGGTGGTGGGAGGAAAGCGAGGGAAAGAACGAG
AAAAGGGAGCGAGGGAAGATGGGAGGAGGTGGAAGAATAAGCCGTCCACC
CGTGGACAAGATAAAGGCGGCTGATTTAAGATGCAGTGCAGCGTCCATCT
ATTAGACGCCGATGCACGGCCGTCACCTGCCTTTTCCCGGTGCTCCTCAC
AAATTTTAAGTCTCACCACCATCCCCTTTCGTCCACAACACACGCTCACA
CCTACCCACACACACCTACCCACCTTCCCACACACGTCGTCAACGCAGAC
AAGGCTGTAGACGGGGAGGTGGTGGCGACAATGTCTGAAGACGATCCGCT
GCACAGCGGCGTCGAGTTTTCGGACCCAACCGCCGCCATCCCGGAGCAGG
TGCGGAGGGAGGGAGGGAGGGAGAGGTAAACAAAGTGGGTTTCCCTCTTT
TTTTCCCCTTACTCATTTTATACTTTTCGTATGATCCTGGCAGCAGATGT
TGTCGATCTGAACCTGCAGGAGAATCAGCAGGATTCAGATTCCTTTCACC
TACCCCCTCTTCTTTCCTCCCTTCCTCCCTCTCAGATCTTGGCAGCGGCC
GCCGAGCTGAATCTGGAGGAGATGAGCAAGATTCAGCACTTGACCCTTCC
GATGTTCATCACGGATCCGGAGACTCCGCATATTATTGCGCAGGTAAAGA
GGGAGGGAAAGAGAGAAAGGGGCAGGGAGGGAGGGAGGGAGGAAGGGAGG
CTAAATGCAGCGCAAATTGCCCTTATCACGTCCCGTCTCGCCCTCCTTCT
CTTCCTCTCCCTTTTCTCCCTCCCACTTCCTCCCTCAGGCCAACTCCGGG
AGTGGGAAAAGCGCCGCCTTCGTCATCGGCACCCTCGCTTTAATAGACAC
CGAAAAGACCTGCCCCCAGGCCATCATCCTCGCTCCCAACCGAGAGCTCG
TCCTCCAGGTATGCTTCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCTTCCCTCCCTCGGACCCTCTTCCCCGTGTGCAAGATATGGCGT
GTACTTTTATTCACAAGGCCCCATCCACTCCTCCCTCCCTCCCTCCCTCC
CTCCATGTCTCACTGCCTTTTCCCCTTCCCTTCCTAACCCTCAGCATCCG
GCGTCTCCTCAGAGGTCATGACCACCTCTGACCCTCCCACCCTCCCTCCC
TCCCTCCCTCTCTTCTTCCAGGCCTACGATTGGGTTCGACAGCTTTCCAA
GCGCATGGTTCCTCCCCTCGACGTCGCCCTGGCCCTGCCTGACAACGCCG
CCTTCACACGTCGGCGGGTGCAGGTAGGTAGATCCAGGGCGGGAACGAGG
GGGGAAAGGAGGGAAGAAGGGAAGTTGTGTCACTGTCAAGTACCTCTACC
TACGGGAGGAAAAAAGGGAGAGAGGGAGGGAGGGAGAGAGGGAGGGAGGG
AAGCTGGTAAGGACGCCTGTGGATTGCTCAGCTTAGATCTTCCCCTCCTT
CCCCCCTTCCATGCTTTATCATGATCACGTTGTCTTTTCTTTCTATAGGC
CCATGTGGTGGTGGGCACGCCGGCGACGACCCTGCGCGGCATCCAGAACC
GGAGTCTCGACGTGAGTCCCTCCCTGCCTCCCTCCCTTCCTCCCTCCCTC
CCTCCTTCCTGCTCTTGTTTTCTCGATATGGCTCTTCAACATCCCTGCCT
CCCTTCCACCCTCCCTCCCTCCCTCTCTCCCTGCCTCCCTTGCACCCTCC
CTCCCTCTCTCTCTGCCTGCTTCTCCCACAACCCCGTCTCCAGGAGGCCA
ACCAGCGCCTTCTTATTCCCAACTTGTCCTCCTTCCCTTCCTCCCTCCCC
CCCTCCTTCCCAGGTCTCCCACGTCCGCATCATGACTCTCGACGAGGCGG
ACCAGCTTCTGGACCCCAAGAATAAAGTCGACTGCGAGAGGATTCGAGGG
TAGGGAGAGAGCGAGGAAGCGAGGGAGGGATGGTGGGAAAAGATGAGACA
AGAAAAGGAGGGAGCGAGGGAGGGTGGGAAGTACGATGTCCACCGACGGG
TATTTCTGACATGCCCACGACACACAGGTTGATTGAAGCGACTGCGCCCG
GACGCTCTCAGACAGGAACCAAGCCCTGCCGGTAGGTCTCTTGCCTCCTC
GTCCTACCTCTCCCTCTCCCTCCCTCCTTCCTTCCCTCCCTTTCTCCCTC
CGGTTTGGGCCCCCATCCCTTCCTCCCTCCCTCCTTCCTTTCTTCCTTCC
CTCCCTCCCTAGGTACGCCCTCTTCTCCGCCACCTACTCCGAGAGCGTGA
TGAACAACGTCAGGGCCTTTGTGCCGCACACCTACAAGCGCTGCTTGATC
CAGTTGGACAAGAACGAGGCAAGAAGGGAGGAAGGGAAAGGTGGGAGGGA
GCGACGGAGGGAGCGACGGAGGGATTGTTGATGTAGTTGACTGTCTACGT
TTCCATAGATTTCCATGTCCTCTCCTCCATTTGTTGCATTTCCTCAACCT
CTTCCCTCTTTCCCTCCCTCCCCTCTTCTTTTCCCCCCAACTCTTGACAC
ACCTCGCCTACTCACACTCCTCTGTTTCACCCCTCCCTCCCTCCCTCCCT
CCCTCCATTCATCCCTCCCGCAGGTGATGGTAGAGGAAATCGCCCAGCTC
TACGTGGACTTGAGAGACGAGAGCGGGTATGACGCTCCTCGGCATGAGCA
GCAACGCCGCAAGGTGGGCAGGGAGGGAGCGAGCGAGAGCAGCCAAAGAG
TGGAGGGAGGGAAAGAGGAATGGCGGGTTCGGATGTCATCATACGTGAAT
GTGACTGCACCCATTACATAACACACAGGAGGACTTCGTCGTGGCCTTGC
TCAAGGAGCGGACCATCACCGGCAAGGTAGGCACGCCCCTTCCCTCCCCC
CCTCCCTCCTCTTGCTCCCCTCCCTCTTCTTGCTCCGCCCACGCGCCCAC
CCTTCTCCCCCTCCCTCCCCCTCTTCCCCAGATCGTCATCTTCGTCCAGT
CCAAGCGGAACTGCGCCTCTCTCGCCGACCGCCTCCGACAGCTGCGGCAT
TTGGAGGCCTCGGAATTTCACGGCGGCTTGAGCCCCGAAGGTGGATTTCT
TCCCCCCTCCTTTTGTTCCTCCCTCCCTCCTCCTTTTTCTTCTTTGTGTT
CCTTCTTTCCTCCATCCCTCGCGGAATAGATGCCTCCTTCCTTTCCTCCC
TCTCTTTTTTCCACCCCCCTGGCATGAATTGTTTATCAAGTCATCCCTTC
CTCTTTCCCTCCCCCTTCCCTTCCCCAATCCCTCCCTTTCTTCCCTCCCT
CCCTCCCGTCTCTCTTTAGAGCGCGACATTTATTTTGCTGACTTTATCCA
GGGGCGTCGAAATGTGCTGGTTGCCACCGACTTGCTCTCCCGGGGCATTG
ACGTGGAAGGTAGGGAGGGAGATACGGAGGGAGGGAGGGAGGGAGATACG
GAGGGAGGGAGGGAGGGAGATAAAAGGATTAGAAGCAACAGACGGAATGA
CGTTGGCCTGAGGTGGCAGAAGAATCACTGACAGTAGAGAAGAGGGTTTT
GTTGCCACATCCCGACGTCCCTCCCTCCTTCCTTCCACTCCTACCTACCC
ACCTCTCTACCTACCTAGGCATAGCGTGGGTCGTGAATTTTGACATGCCT
TTCCAACCGCGCGTGGCCCGGAGTGACGAGGAGGGGAGCTTCACGGATAC
GGGGTAAGGAGGGAGGGAGGAAGGGTAAAAGATAAGGAGGGAGGGAGGGT
CAAGGAGGGAGGGATTCCACCACGTTCTTCCACAGAGCAAGAAAGGAATG
CACCCCTCGCGAATAGTCGTACATCTCATGCAAGTGATCATACACGATAT
GCGAATTACCATACATCTAGTGCATTCAATCCAAATAATTATACATCCCA
TGCGATCACTCATACACCACCAGGGCCCCTGAGACTTACATCCATCGCGT
CGGTCGCACTGGCCGCTTCGGCGCGGAGGGAATCGCCGTCTCCTTGATCG
GCAACAGGGAGGTACACCCCCGTCTCCCTCCTTTTGATTTCTGCTTCCTT
CCCTACTCTCCTTGCTCACTTTTTCCTGATTTCTTGTTGTGCATGACCTC
ATGGCCTCGTCCTCCTTTTCTTCCGCTCTGATTCCTCTCCTCTCCTCTTC
CTCCTTTCCATGGATCCTGCCTTGTCATCTCACCGCCTCGTCCTCCCTTC
CTCCCTCCCTCCTTCCCTCCCAGGAATGGAAGCTCCTGGGGGCCATCGAG
AAGGACTATTCCTCGGGCTTGCAGGCACAGGACGGTAAGGAGGGAGGGAG
CGAGGGAGGAAAAGAAGACGGAACAGGGAGCACAACTTTTTTGGCTTGTG
TTGAGACTAGGAAGGAAGGGACGAAGGGACAGGGAGAGGGAAGGAGAATG
GCGCGTCACGGATTAGTCATGCCTTCACCATCACCACTTTGCTTCTCACC
CTTCTCGCTCCTTTCTTCATCCTCTTCCTGGCAGGCGAGCTCATTCACCG
CGTGCCTGCCGACTCCATCGCCGAGGTCGAAAAGGTTCGTCCCCTGCCCT
TCCTTTCTCCCCCCCCTTTTCCTTTTCCTTCGTTCCTATTTTGTTGGACC
TTCAAAGCTAGCAAATCCAACCTTTTCTCTCCCTTGCACTTTCCCTTTCT
CCCTCCCTCCTTACCACCCTCCTTCTCTCTCTCCTACCCTCCCTCAGGTT
GCCAAGGAAGTATCCGACGCCGTCAAGAAGCGCCGATCCGACCGCCTCGC
TTTGGAGGCCGCGGAGGAGTTGGAGAAAGAGGCGGAAAAAGAAGCAGCAG
AAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGTAGCA
GCAGAAGCAACAGCTGCCGCTGATTTATCCGAAACATCAACAAAGGGAGT
GGAGAAAGCTAAAGAGGACAAGGAGGAGGGGGAGAACGGGAATGGCGGCG
GAGAGGAGAAGAAAGAGGGAGGAGATGAATGA

Coding sequence (CDS) from alignment at chr9:2494..7975-

>NO09G00020.1 ID=NO09G00020.1|Name=NO09G00020.1|organism=Nannochloropsis oceanica|type=CDS|length=1983bp|location=Sequence derived from alignment at chr9:2494..7975- (Nannochloropsis oceanica)
ATGGCTCTCATCATGTCTCGCCTCATTTTGTTCCGTCACACCCCTCGCAC
ACAAATCAGACACATCGTCCACACAGCCATGTCGTCCCCTCCCCGAAACG
ATACGGGAGGGTGGGGTGCTTCGTCCAACCACGCACATGCGACCTTGGCG
CCGCCTCCTCCTCTAGCTCCTTCTGAGCCCTTTCCTGCCGCCCCCGGGGC
ACCGCCTCCGATGATGCAGTCACGATATGGCGGGGGCGGTGGCGGAGCGC
GGGAGAGGCATCGGCCCAAGTACAAGGAGCGGGAGCTGGAGGAGTCGTTC
AAGGACTCGTGCCGGATTCACTTGCCGAGCAAGAGAGACAAGGCTGTAGA
CGGGGAGGTGGTGGCGACAATGTCTGAAGACGATCCGCTGCACAGCGGCG
TCGAGTTTTCGGACCCAACCGCCGCCATCCCGGAGCAGATCTTGGCAGCG
GCCGCCGAGCTGAATCTGGAGGAGATGAGCAAGATTCAGCACTTGACCCT
TCCGATGTTCATCACGGATCCGGAGACTCCGCATATTATTGCGCAGGCCA
ACTCCGGGAGTGGGAAAAGCGCCGCCTTCGTCATCGGCACCCTCGCTTTA
ATAGACACCGAAAAGACCTGCCCCCAGGCCATCATCCTCGCTCCCAACCG
AGAGCTCGTCCTCCAGGCCTACGATTGGGTTCGACAGCTTTCCAAGCGCA
TGGTTCCTCCCCTCGACGTCGCCCTGGCCCTGCCTGACAACGCCGCCTTC
ACACGTCGGCGGGTGCAGGCCCATGTGGTGGTGGGCACGCCGGCGACGAC
CCTGCGCGGCATCCAGAACCGGAGTCTCGACGTCTCCCACGTCCGCATCA
TGACTCTCGACGAGGCGGACCAGCTTCTGGACCCCAAGAATAAAGTCGAC
TGCGAGAGGATTCGAGGGTTGATTGAAGCGACTGCGCCCGGACGCTCTCA
GACAGGAACCAAGCCCTGCCGGTACGCCCTCTTCTCCGCCACCTACTCCG
AGAGCGTGATGAACAACGTCAGGGCCTTTGTGCCGCACACCTACAAGCGC
TGCTTGATCCAGTTGGACAAGAACGAGGTGATGGTAGAGGAAATCGCCCA
GCTCTACGTGGACTTGAGAGACGAGAGCGGGTATGACGCTCCTCGGCATG
AGCAGCAACGCCGCAAGGAGGACTTCGTCGTGGCCTTGCTCAAGGAGCGG
ACCATCACCGGCAAGATCGTCATCTTCGTCCAGTCCAAGCGGAACTGCGC
CTCTCTCGCCGACCGCCTCCGACAGCTGCGGCATTTGGAGGCCTCGGAAT
TTCACGGCGGCTTGAGCCCCGAAGAGCGCGACATTTATTTTGCTGACTTT
ATCCAGGGGCGTCGAAATGTGCTGGTTGCCACCGACTTGCTCTCCCGGGG
CATTGACGTGGAAGGCATAGCGTGGGTCGTGAATTTTGACATGCCTTTCC
AACCGCGCGTGGCCCGGAGTGACGAGGAGGGGAGCTTCACGGATACGGGG
GCCCCTGAGACTTACATCCATCGCGTCGGTCGCACTGGCCGCTTCGGCGC
GGAGGGAATCGCCGTCTCCTTGATCGGCAACAGGGAGGAATGGAAGCTCC
TGGGGGCCATCGAGAAGGACTATTCCTCGGGCTTGCAGGCACAGGACGGC
GAGCTCATTCACCGCGTGCCTGCCGACTCCATCGCCGAGGTCGAAAAGGT
TGCCAAGGAAGTATCCGACGCCGTCAAGAAGCGCCGATCCGACCGCCTCG
CTTTGGAGGCCGCGGAGGAGTTGGAGAAAGAGGCGGAAAAAGAAGCAGCA
GAAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGTAGC
AGCAGAAGCAACAGCTGCCGCTGATTTATCCGAAACATCAACAAAGGGAG
TGGAGAAAGCTAAAGAGGACAAGGAGGAGGGGGAGAACGGGAATGGCGGC
GGAGAGGAGAAGAAAGAGGGAGGAGATGAATGA

Synonyms

Publications