NO08G04180, NO08G04180 (gene) Nannochloropsis oceanica

Overview
NameNO08G04180
Unique NameNO08G04180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3387
Alignment locationchr8:1205711..1209097 +

Link to JBrowse

Properties
Property NameValue
DescriptionTransmembrane protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:1205711..1209097 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
BLAST of NO08G04180 vs. NCBI_GenBank
Match: EWM26881.1 (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 315.8 bits (808), Expect = 3.900e-82
Identity = 183/367 (49.86%), Postives = 229/367 (62.40%), Query Frame = 0
Query:   79 DEPKDS---CDDDDDDIGIWPDATNI----CQSAGASSSSSSRSSLPINYEFLTRTLDAGEDVEHINIEECNVRHAFRNLQRLICDERLLLAHTLLLKLDAYLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNTDWVRIAMSHPNTRARLENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLASRDACMHIFACDATEHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYME 439
            +EP  S    +DDD+D+  WPD  ++    CQ         +R+S  INY F +R LDA  DV+H+ + E NV+ AFRNLQ L+CDERLLLAHTL  KL ++L                                                NTD VR AM+HP TRARLE+L+RRV+AC EA  L AS  GW +AQ +FGV+THYR+ EDDG+LTVRL+ +++ CSVFD+LAVLREADLY LWAPFVRASS+V+E+GK  LVIWFQ +VPWLASRDAC+HIFACDATE G+LLLCG+S+R           XXXXXX            + GL +PPL  GWNSARMEVR C+ Q+++ GP  C ++
Sbjct:    2 EEPSHSQTGVNDDDNDLNNWPDGGDLHNVECQ--------GNRNS--INYTFFSRNLDAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFL---------------GVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASETGWVFAQKYFGVSTHYRM-EDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDATERGVLLLCGQSIREGEGKGXXXXXXXXXXXAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLGPRACCVD 342          
BLAST of NO08G04180 vs. NCBI_GenBank
Match: EWM27447.1 (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 183.3 bits (464), Expect = 3.000e-42
Identity = 121/420 (28.81%), Postives = 199/420 (47.38%), Query Frame = 0
Query:  130 AGEDVEHINIEECNVRHAFRNLQRLICDERLLLAHTLLLKLDAYLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNTDWVRIAMSHPNTRARLENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLV---VPWLASRDACMHIFACDATEHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLP-LPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRASRFYIDYFIPRVLSFCHARGWALPPSLVPAYDSPMVPQCEATEVWKEEKERMQA 546
            A  + + + + E NV+ A+R +Q L  D RL LA  LL K++A+  +                                                +W    M+      RLE L RRV  C +A R + S D W  A T  G+ T  R +E D +L  R  GE++ C V  QLAVLREAD Y  W P +  S +VK LGK   ++WF++    +P++  RDA +H++ CDA+E  L++L G S+       +D+                     E + V P    WN AR++++    Q++I  PT   +++I  +D K+  +P  ++N+F++ + G  +  L ++  R++  PV +P A  MR+  FY +Y +P  L+  + +GW +PP  VPA++  +   C + + W++E   + A
Sbjct:   40 AANETQALQVGEENVQVAYRLVQLLDADTRLFLADDLLQKIEAFTRTGTGP------------------------------------------QAEWAMHVMARSEDSQRLEELRRRVQVCRQAARDMQSED-WELAHTEEGIQTFLRRDEGDNTLAWRTHGEIEDCPVVSQLAVLREADHYHDWIPLMDKSKVVKRLGKIEQMLWFRVAGRGLPFV--RDAVLHLYGCDASEEDLIILSGASI------PEDE-------------------ITESMGVRPPKKKWNHARVDIKYFSIQLRILSPTHTKIDLIYKLDVKIKFVPQKVINYFSKFLCGWVIWFLFQEMRRLQTDPVESPTAQLMRSEPFYANYLVPYCLNLAYTKGWEVPP--VPAFE--INKDCASAQAWRQEYHELLA 385          
BLAST of NO08G04180 vs. NCBI_GenBank
Match: EJK43974.1 (hypothetical protein THAOC_37531, partial [Thalassiosira oceanica])

HSP 1 Score: 168.7 bits (426), Expect = 7.700e-38
Identity = 130/384 (33.85%), Postives = 188/384 (48.96%), Query Frame = 0
Query:  243 LNRRVHACHEAFRLLASHD-----------GWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLA-SRDACMHIFAC-----------------DATEHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRP------SSFGGE--LEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLPL-PLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRAS-RFYIDYFIPRVLSFCHARGWALPPSLVPAYDSPMVPQCEATEVWKEEKERMQALPPSL-ARLSVTWRSREGQGREGGPGGGKMSSFRAASLLSPM 587
            L RR      A   L+ HD           GW +AQT FGV+THYR  E DGSL++R+ G++ G  +F+QLA+LRE DLY  WAPF  +S  + +LG+  +  W+ + VP    SRDAC     C                 D  EHG++       ++R  G      XXXXXX            SS   +  L  L +PP+  G    RM +R+  A+V + GPT+    ++ NVDP L L P +L++F  +K+ G+ L  LQ  A R+ + PV N HA RMR    FY D+ +P+  ++C A+GW +PP  V A++            W ++ +   A    + AR   +  S      +GG G G  SS   +++ SPM
Sbjct:   86 LRRRASLFLAAKETLSQHDKNDGEESDENTGWVHAQTLFGVSTHYR-RESDGSLSIRIAGDLVGVPLFEQLAILREVDLYHAWAPFCVSSRKLAQLGRLDVAAWYDVGVPIFGLSRDACYRAVGCDGMAEDGSVMIVAVGLNDTDEHGVVSSASLGKQTRKRGPSXXXXXXXXXXAEGLEATEGSLLSSLARDEILSTLEMPPVPSGAGRGRMTIRNFSAKVDVLGPTSARTIMVVNVDPNLQLIPQALIDFSMKKMCGILLSRLQASARRVLKDPVGNAHARRMREDVTFYRDWLLPKFRAYCEAKGWNMPP--VGAFEVSDEELRATGMGWIDDGQSSTADASFIGARTPHSRSSSRAATTDGGFGSG--SSSVTSAMSSPM 464          
BLAST of NO08G04180 vs. NCBI_GenBank
Match: OEU22457.1 (hypothetical protein FRACYDRAFT_179309, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 161.4 bits (407), Expect = 1.200e-35
Identity = 102/269 (37.92%), Postives = 147/269 (54.65%), Query Frame = 0
Query:  240 LENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLA-SRDACMHIFACDAT-EHGLLLLCGESVRSRSNGT--DDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLP-LPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRA-SRFYIDYFIPR 503
            L  +  R     +A + L  +D WT+AQT FGVTT+YR +E DGSL+++L+G V+  S+F+Q+AVLRE DL  LWAPFV +S  V  L K   V WF + +P     RDAC     CD+  E G +LL  E +  R      DDK            R       L+ L +PP      + RM +RS  AQ+ I   T+   +++AN+D  LP +P  LL+F  +++ G+ L  +Q  A +I R P++N HAI+MR    FY  + +P+
Sbjct:  136 LNKMEDRCRLFEKAKKNLDVNDDWTHAQTMFGVTTYYR-KESDGSLSIKLEGTVEDASLFNQIAVLREIDLTYLWAPFVTSSMTVAHLDKLDTVGWFVVGLPHFGIMRDACFRAIGCDSMYEDGSVLLVAEGIADRPEDLDGDDKRDLNRTRIEDSLRTDPI---LDTLDLPPPPTRTGNGRMTIRSISAQIHIESATSSTTKIVANIDLNLPFIPPKLLDFIMKRMCGLILYKMQGAARKISRDPITNLHAIKMREDDDFYRRFLLPK 400          
BLAST of NO08G04180 vs. NCBI_GenBank
Match: GAX11088.1 (hypothetical protein FisN_9Hh178 [Fistulifera solaris])

HSP 1 Score: 160.2 bits (404), Expect = 2.700e-35
Identity = 91/281 (32.38%), Postives = 151/281 (53.74%), Query Frame = 0
Query:  239 RLENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLA-SRDACMHIFACD-ATEHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLP-LPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRAS-RFYIDYFIPRVLSFCHARGWALP 516
            +LEN++R  +    A + L + + WT+A  HFG+TT+YR  E+DGSL+V+L+GE+ G  +F+Q+AVLR  DL+  W PF  +S I+ +LGK  ++ WF + +P    +RD C     CD  +E G +++ G+ +          G            P+ F      L +PP      + RM +R     V I  PT+    ++AN++P +  L   +++F  + +AG+ L  LQ  A ++ + PV+N HA +MR    FY  + + +  +FC  +GW +P
Sbjct:  109 KLENVSRIFYG---ALKNLNTDEDWTFASLHFGITTYYR-REEDGSLSVKLEGELTGVPLFEQIAVLRAGDLHYKWVPFCSSSMIIAQLGKLDIINWFMIGIPQFGLARDGCYRAIGCDNMSEDGSIIIAGQGINDIM-----PGDHPPEDPFLSNDPAVF-----ALNIPPAPTKRGNGRMTIRKFETVVNITSPTSAKTRIVANLNPNIAFLSQGIIDFALKHLAGVVLAKLQSAAKKVVKNPVTNHHAQQMREEPDFYQTWLMAKFKAFCDEKGWEMP 375          
BLAST of NO08G04180 vs. NCBI_GenBank
Match: XP_002180706.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC48114.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 157.1 bits (396), Expect = 2.300e-34
Identity = 93/269 (34.57%), Postives = 138/269 (51.30%), Query Frame = 0
Query:  235 NTRARLENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWL-ASRDACMHIFACD-ATEHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLP-LPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRASRFYIDYFI 501
            + +A ++ L  RV    +A   L   D WTYA THFG+ T YR EED  SL+V+L+GE++G  +F+Q+ VL+E DL+  WAPF  +S  V +L K   V WF + +P    +RD C     CD   E G +LL G+ V  R                      S    L  L +PP+     S RM +R   + + +  PT+    ++AN+DP +  LP SLL F  + +AG+ L  LQ    ++ + PVSN HA +MR    +  +++
Sbjct:  110 SNKAAIDKLENRVRIFRKALHNLNEDDEWTYASTHFGIKTFYRREEDQ-SLSVKLEGEIEGVPLFEQICVLKEVDLHYKWAPFCSSSMTVADLDKLDTVGWFMIGLPHFGVARDGCFRAIGCDNIIEDGSILLVGQGVHDRPPDAPPPEDPFL----------SEDPILNDLGIPPVPKRRGSGRMTIRKFESVIHVLSPTSAKTRIVANIDPNMAFLPQSLLEFLMKHLAGVMLAKLQAATKKVLKNPVSNEHARKMREHEDFYKHWL 367          
BLAST of NO08G04180 vs. NCBI_GenBank
Match: CBJ32035.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 154.8 bits (390), Expect = 1.200e-33
Identity = 93/280 (33.21%), Postives = 141/280 (50.36%), Query Frame = 0
Query:  241 ENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLASRDACMHIFACDAT-EHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLPLPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRASR-FYIDYFIPRVLSFCHARGWALPPSL 519
            + + +R   C  +     S D W  AQT  G+TT Y++ + DGSL +++ G +   +V DQLAV+RE DL++ W PF   S ++K LG   L+++F + +P +  RD  +H + CD+  E G +L+ G SV     G                            V  P   GW  ARM+VR+  A++++  PT+    ++ANVDPK P+P S++NF  RK+AGM L  L KQ  +  R    N H  R+   + FY  +  PR   F   +GW +   L
Sbjct:   74 DEVRQRAAECQSSLDDWQSPD-WLVAQTFMGITTFYKV-DPDGSLWIKMHGTMDDVTVMDQLAVVREVDLFNKWVPFCDTSKLLKRLGIVELLVYFSMSIPGV-GRDCVLHAYGCDSVLETGCILIQGRSVEEVPEG----------------------------VEVPQVKGWRHARMDVRAFRAKIEVLSPTSARTSIVANVDPKAPVPQSVVNFVVRKMAGMFLYCL-KQTAKCIRADEGNCHRRRIVEDKAFYKGWLFPRFERFYRRQGWTVDEEL 321          
BLAST of NO08G04180 vs. NCBI_GenBank
Match: XP_002289596.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93133.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 153.3 bits (386), Expect = 3.300e-33
Identity = 101/329 (30.70%), Postives = 156/329 (47.42%), Query Frame = 0
Query:  257 LASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLA-SRDACMHIFACDA-TEHGLLLLCGESVR-SRSNGTDDK--------------GGXXXXXXXXXXRPSSFGGE-------------------------------------------LEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLP-LPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRAS-RFYIDYFIPRVLSFCHARGWALPPSLVPAYD 524
            L +   W++AQT FG+TT+YR  E D SL+++++GE+ G  +F+Q+ VLRE DLY LWAPF   S  + +L K  +V W+ + V  +  SRDAC     CD   E G +LL    +  S   G  D+              GG             S+ G+                                           LE + +PP+  G    RM +R+  A + + GP++   +++ NVDP L  +P SL++F  +++ G+ L  LQ  A ++ + P+ NPHA RMR    FY D+ +P+   +C   GW++PP  V A+D
Sbjct:  239 LTTSSNWSHAQTLFGITTYYR-RELDHSLSIKIEGELHGLPLFEQMVVLRECDLYHLWAPFCTKSRKLAQLDKLDVVAWYMVGVSLVGLSRDACYRAVGCDCMNEDGSVLLVAVGLNDSEEYGVKDELRVGNRDGKLVDGDGGDLDVELDDVGEHLSYVGDGNEQHQQQEKQKLYREERTASSKLSDSTLVDTTASSFLTRDAILETIEIPPIPQGMGRGRMTIRNFAAGIDVLGPSSARTKLVVNVDPNLHFIPQSLIDFCMKRMCGVLLSRLQATARKVVKDPIKNPHARRMREDVSFYRDWLLPKFRVYCDESGWSMPP--VKAFD 564          
BLAST of NO08G04180 vs. NCBI_GenBank
Match: OQR94905.1 (transmembrane protein, partial [Thraustotheca clavata])

HSP 1 Score: 153.3 bits (386), Expect = 3.300e-33
Identity = 98/287 (34.15%), Postives = 156/287 (54.36%), Query Frame = 0
Query:  238 ARLENLNRRVHACHEAFR--LLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLASRDACMHIFACDAT-EHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLPLPLSLLNFFTRKIAGMGLLLLQKQAIRIRR----YPVSNPHAIRMRASRFYIDYFIPRVLS-FCHARGWALPP 517
            + L  +  R    H+A     L +  GW +AQT+FGV+TH++   DDG++ ++L G  +G  +F+ LAV+RE DL+ LWAPF   S ++  LG+  L+ +  L +P L  RDA +H F  +AT EH  ++L G+S+      T+D+                    +  L  PP+  GWN+ RM++R+  A ++  G       ++ NV PK P+P++LLNF  +K+AG+ L LL ++A +I +    +  +N HA R+R   FY+ +  PR+   F H     LPP
Sbjct:  489 SELSQVKERSAMGHQALHEFNLDADAGWRFAQTYFGVSTHWK-PGDDGTIWLKLDGICEGVDIFNALAVIRETDLFHLWAPFCNRSELLANLGRVELIAYMSLAIP-LMQRDAIVHAFGINATYEHRCIVLLGKSI------TEDQ------------------CPVNNLEFPPI-KGWNADRMDLRAFRALIEPYGRNRARTCIVVNVHPKCPVPMTLLNFTIKKMAGILLYLLMREAGKIEKHKNEHDPTNEHAKRIRNDPFYL-WLHPRMQKWFEHLEAGTLPP 747          
BLAST of NO08G04180 vs. NCBI_GenBank
Match: XP_008614367.1 (hypothetical protein SDRG_10166 [Saprolegnia diclina VS20] >EQC32426.1 hypothetical protein SDRG_10166 [Saprolegnia diclina VS20])

HSP 1 Score: 152.9 bits (385), Expect = 4.400e-33
Identity = 92/260 (35.38%), Postives = 148/260 (56.92%), Query Frame = 0
Query:  241 ENLNRRVHACHEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFDQLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLASRDACMHIFACDAT-EHGLLLLCGESVRSRSNGTDDKGGXXXXXXXXXXRPSSFGGELEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLPLPLSLLNFFTRKIAGMGLLLLQKQAIRIRRYP----VSNPHAIRMRASRFY 496
            E   + +HA HE F   A   GW +AQT+FGV+TH++   DDG++ ++L G  +G  +F+ LAV+RE DL++LWAPF   SS++  LG+  L+ +  + +P L  RDA +H F  +AT EH  ++L G+S+      T+D+                    +  +  PP+  GWN+ RME+R+  A V+          ++ NV PK P+P+SLLNF  +K+AG+ L LL ++A ++ ++      +NPH +R++   FY
Sbjct:  596 ERCAQGMHALHE-FNADAD-AGWRFAQTYFGVSTHWK-PGDDGTIWLKLDGICEGVDIFNALAVVRETDLFNLWAPFCNKSSLLATLGRVELITYLSVAIP-LMQRDAVVHAFGINATYEHRCVVLLGKSI------TEDQ------------------SPVNNIEFPPV-KGWNADRMELRAFRALVEPYARNRGRTCIVVNVHPKCPVPMSLLNFTIKKMAGVLLYLLMREAAKVEKHTNEPGTTNPHVLRIQNDPFY 826          
The following BLAST results are available for this feature:
BLAST of NO08G04180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26881.13.900e-8249.86transmembrane protein [Nannochloropsis gaditana][more]
EWM27447.13.000e-4228.81transmembrane protein [Nannochloropsis gaditana][more]
EJK43974.17.700e-3833.85hypothetical protein THAOC_37531, partial [Thalass... [more]
OEU22457.11.200e-3537.92hypothetical protein FRACYDRAFT_179309, partial [F... [more]
GAX11088.12.700e-3532.38hypothetical protein FisN_9Hh178 [Fistulifera sola... [more]
XP_002180706.12.300e-3434.57predicted protein, partial [Phaeodactylum tricornu... [more]
CBJ32035.11.200e-3333.21conserved unknown protein [Ectocarpus siliculosus][more]
XP_002289596.13.300e-3330.70predicted protein [Thalassiosira pseudonana CCMP13... [more]
OQR94905.13.300e-3334.15transmembrane protein, partial [Thraustotheca clav... [more]
XP_008614367.14.400e-3335.38hypothetical protein SDRG_10166 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL105nonsL105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006561NSK006561Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G04180.1NO08G04180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|372632gene_3760Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100596g3gene3657Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G04180.1NO08G04180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G04180 ID=NO08G04180|Name=NO08G04180|organism=Nannochloropsis oceanica|type=gene|length=3387bp
CTTCAAGTTTCGTTTGTTATCTCATTCTCTTTCTTCCTCTCTCTCACACC
ATGCTCTCACGTATGTGCGCTTCGACTCACCAACAAAATCTAGTTACGGC
CTTCAGGACTCGGCCGCTAGTCGCGGCATTGGCCAAGTCAAGTTCAAAGG
TTCGCTCGGGGTAAGACAAATCGCCACAAAAGCAGTGACCATGGAAAAAA
ACAAGACGCAGCAGCAGCTCAACCGAGACAAGCACTACCCCGACATGCAG
CCCGCTCCCGCTCCTCTACCGCTGCCAAGGCAAACAGGCATACTGGCCTC
GTTCATGACCTTCAATGGTGCCCGTAAGGGAAAGCCGCTTTCAACGACGC
GCTCGACGAAAGCAGAGCCCTCAAAAAACCTCCCGGTCCAGCTTGTGGCG
CCGGAAGAGAGGCGCTGCGAGCACGACGAGCCAAAAGACAGCTGTGATGA
TGACGACGATGACATCGGTATTTGGCCCGATGCTACAAATATTTGCCAAT
CTGCAGGCGCTAGCAGCAGCAGCAGCAGTCGTAGCAGCTTGCCTATTAAC
TACGAATTCCTGACGCGGACGTTGGACGCTGGGGAAGACGTCGAGCACAT
CAACATTGAGGAATGCAATGTCAGACACGCCTTTCGAAACCTTCAGCGTT
TGATTTGCGATGAACGACTGTTGCTAGCACATACGTTGCTGCTCAAGCTC
GATGCCTACTTATTATCATCGTCACCTGCGGCAGCGACAGTAGCGACAGC
AGCAACAGCAACAGCAGCAGCAGCAGTGGAAGCAGAAGCGGCAGCTGCTC
CCATAACCATCACTTCGGGCGGCAGCTCCTCCCAGGCCCGCTCTTCCTCG
CAACGAAACACTGACTGGGTCCGCATCGCCATGTCTCACCCCAACACGCG
TGCCCGTCTAGAGAATTTGAACCGGCGTGTACATGCCTGCCATGAGGCCT
TTCGGCTCCTCGCGTCGCATGATGGGTGGACATACGCTCAGACACATTTC
GGGGTGACTACACACTATCGCATCGAAGAGGACGACGGGAGTCTCACGGT
TCGGTTGCAGGGAGAAGTGAAAGGATGCTCCGTGTTTGATCAGCTGGCCG
TTTTGAGGGAGGCGGATCTATACTCCTTGTGGGCGCCGTTTGTCCGGGCC
TCGTCCATTGTCAAGGAGgtgcgtgggtattgataaatagcgaaacataa
gaattactgcatctgcgagtcgattacatctttcctccgcattattcaaa
taccttttcacatattcccacccatatcgattgggctgtggattcattcg
gatggtggcaccatggctcggctcaaggaacgcgtggaaacatgtatatc
gatcgtccctactccatctccacctctcttcccaccctcccttttttgca
ctgtacacattgtttcccacctttctctttctctattcttagTTGGGGAA
GACAAGTCTTGTCATTTGGTTCCAGCTGGTAGTCCCCTGGCTGGCCTCCA
GAGACGCCTGCATGCATATTTTCGCCTGTGACGCCACAGAACATGGCCTC
CTACTACTGTGTGGGGAAAGCGTGCGCAGCCGGAGCAATGGCACAGATGA
CAAAGGAGGAAGGGAGGACAAGAAGGAGGACGAGGAGGAAAGACCCTCGA
GCTTTGGAGGCGAGCTGGAGGGTTTGGTCGTCCCTCCTCTGACCCCGGGA
TGGAATTCGGCCAGGATGGAGGTACGGAGTTGCTATGCCCAGGTGAAAAT
AGCGGGGCCGACAACTTGTTATATGGAAGgtatagagggagggagggagg
gagggagggagggagggagggagggagggagggaagaaggcttatatgta
tgtatgtgtgtttctagcacgttctcataaatatttaatcttggactgac
atcctcttgctcccgtcgtacgaaccaccctccttccctccctcccctcc
tctcctcccgcagTCATCGCCAATGTGGACCCAAAACTGCCCCTCCCCCT
CTCCCTCCTGAATTTCTTCACCCGCAAGATCGCAGGGATGGGCCTCCTCC
TCCTCCAGAAGCAGGCCATTCGCATCAGACGCTACCCTGTCTCGAATCCC
CACGCGATCCGCATGCGCGCCAGTCGGTTTTATATCGATTATTTCATCCC
ACGGGTCCTCTCCTTCTGCCATGCCCGGGGTTGGGCGCTCCCTCCCTCCC
TCGTCCCTGCTTACGACTCTCCTATGGTCCCGCAGTGCGAGGCTACCGAG
GTCTGGAAGGAAGAAAAGGAGAGGATGCAGGCCCTTCCTCCCTCCCTCGC
TCGCTTGTCTGTGACGTGGAGGAGTCGCGAGGGGCAAGGGCGGGAGGGAG
GGCCGGGGGGAGGAAAGATGTCGTCGTTTAGAGCAGCCTCGTTGCTGTCT
CCCATGATTTCTTCGCTTGTAGGAGTGATTGATGATGGTGATGAGGAGGA
GGAAGAGAAAGAGGAAGAAAAAGAGGGGCGGGAATACCAGGAGCAGGAGG
AGCAGGAGGAGCAACAGGAGGACCGAAAGGAAGGAGGGACGGAGCGCAGG
GAGGGCGGAAGGAAGGGAGGGCAAGCACGGAGAGCACGCATCTTGCAAGG
CTTCCTTCTCCGGGCTACCTGGGTCTGGTTGGTGATGGGGGGGGGTATGT
CCATTTATCACGCCTTTATTGAGGGGAAGCAGGAGAGCGGGAGGGAGGGA
GGGGTGGGTATCTCCCTTGGGCGTCAGGCCCTAGAGCTGGTGGGAGCCGC
GTTGTTGCGGCTGTGGTTGCTTGGCACGATCACCAAGAGCAGACGGATGA
GGCGTGTGGCCTGGCAATGGACGTGCCTTCTGACAGCCTCCATGCTCCTG
GGCTTGGTCCTCTGTGTGTATAGAGCGCCTCGGATTTGGGTGGGAGGAGG
AGGGAGGGAGGGAGGAGTGGGACGGACGGTGGTTGGGGTGGTGTGTGAGG
TTCGGCCGGGAGGGCGGGCGTTGGCCTTGGCGAAGGCTGCGGAGTTGAAG
GGATGGATGCGGAGGTGGGACAGAGGGTTGTGGCCTTCGAGCCTATGGAT
GTGGATGGAATGGCGGAGGGAGAGGAGGCGGAGGGAACGGCAGCGGGCGG
TGTTGTTGGTGAGGGGGAGGACGGAGGGGATGGAGAGGGCTGAGCAGGGA
AAGGACTCACTATTGTAAGGGTTAGACGTTGGACATCTGAATGTTGCGGC
CCGATGGACCTGTATTAGAAAAGAATTGAGACACACGAAGACGGTGGACC
CCAGGAGCAGCAGAAAGTAAAGCGAGAAACAGTATTCCCGGAAATTGAGC
AAGACAAGCGTGTGATGGCACCACATCCAGCACACTTATATATATATATA
TGTATTTATTCGATGTAAAGTATAGACCAAAGTGTGT
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protein sequence of NO08G04180.1

>NO08G04180.1-protein ID=NO08G04180.1-protein|Name=NO08G04180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=840bp
MEKNKTQQQLNRDKHYPDMQPAPAPLPLPRQTGILASFMTFNGARKGKPL
STTRSTKAEPSKNLPVQLVAPEERRCEHDEPKDSCDDDDDDIGIWPDATN
ICQSAGASSSSSSRSSLPINYEFLTRTLDAGEDVEHINIEECNVRHAFRN
LQRLICDERLLLAHTLLLKLDAYLLSSSPAAATVATAATATAAAAVEAEA
AAAPITITSGGSSSQARSSSQRNTDWVRIAMSHPNTRARLENLNRRVHAC
HEAFRLLASHDGWTYAQTHFGVTTHYRIEEDDGSLTVRLQGEVKGCSVFD
QLAVLREADLYSLWAPFVRASSIVKELGKTSLVIWFQLVVPWLASRDACM
HIFACDATEHGLLLLCGESVRSRSNGTDDKGGREDKKEDEEERPSSFGGE
LEGLVVPPLTPGWNSARMEVRSCYAQVKIAGPTTCYMEVIANVDPKLPLP
LSLLNFFTRKIAGMGLLLLQKQAIRIRRYPVSNPHAIRMRASRFYIDYFI
PRVLSFCHARGWALPPSLVPAYDSPMVPQCEATEVWKEEKERMQALPPSL
ARLSVTWRSREGQGREGGPGGGKMSSFRAASLLSPMISSLVGVIDDGDEE
EEEKEEEKEGREYQEQEEQEEQQEDRKEGGTERREGGRKGGQARRARILQ
GFLLRATWVWLVMGGGMSIYHAFIEGKQESGREGGVGISLGRQALELVGA
ALLRLWLLGTITKSRRMRRVAWQWTCLLTASMLLGLVLCVYRAPRIWVGG
GGREGGVGRTVVGVVCEVRPGGRALALAKAAELKGWMRRWDRGLWPSSLW
MWMEWRRERRRRERQRAVLLVRGRTEGMERAEQGKDSLL*
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Synonyms
Publications