NO08G04070, NO08G04070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G04070 vs. NCBI_GenBank
Match: EWM26875.1 (Golgi apparatus membrane protein TVP15 [Nannochloropsis gaditana]) HSP 1 Score: 273.1 bits (697), Expect = 8.800e-70 Identity = 139/186 (74.73%), Postives = 161/186 (86.56%), Query Frame = 0 Query: 1 MMAPEETKVAAGSPGSASNLDKPNTSAKVKQMTWLETLRRDGCLPLKTIGFFTGMALTIIACLTFASKLLDLNVVGAINQVWLAIFGLTMMLLEASTSTNFVSKKVSRWLNENMKILTYMTGRGLFYCFLGTIELGFWFSTLHLVIGIILCVLGVVTIFVGFALGMKLRSIRRDLAREDDARKTFQ 187 M+ EETK + + S TS KV Q++WL+ LRR+GCLPLKT+GF TG+ALT+IACLTFA+KLLDLNVVGAINQVWLAIFGL MMLLEAS+STNF+S++VSRWLNENMKILTYMTGRGLFY F+GT+ELGFWFSTLHLVIGIILC LG VTIFVG+ALGMKLRS+RRD+A+EDDAR+ Q Sbjct: 1 MLNAEETKTSGAADASHGGKKANTTSTKVNQVSWLQRLRREGCLPLKTVGFLTGLALTVIACLTFAAKLLDLNVVGAINQVWLAIFGLIMMLLEASSSTNFLSQRVSRWLNENMKILTYMTGRGLFYIFVGTLELGFWFSTLHLVIGIILCSLGGVTIFVGWALGMKLRSLRRDMAQEDDARRVSQ 186
BLAST of NO08G04070 vs. NCBI_GenBank
Match: CBJ30176.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 100.1 bits (248), Expect = 1.000e-17 Identity = 68/237 (28.69%), Postives = 119/237 (50.21%), Query Frame = 0 Query: 5 EETKVAAGSPGSASNLDKPNTSAKVKQMTWLETLRRDGCLPLKTIGFFTGMALTIIACLTFASKLLDLNVVGAINQVWLAIFGLTMMLLEASTSTNFVSKKVSRWLNENMKILTYMTGRGLFYCFLGTIELGFWFSTLHLVIGIILCVLGVVTIFVGFALGMKLRSIRRDLAREDDARKTFQDFDEDQDGRLSTSELARLCHSLGSKLTHNELQAAVTTLDVNRDGYIQEEEFLRWW 242 E +K+ A + A+ +AK+K M RDG + +K + + G+ L + +F L+ V A+ +++ FG ++LLEA +S + KK+ +++ T + GRG F+ F+GT+ L W + +++G+ L ++G I+ G L ++ ++ + F+ FD +QDG L +EL L SLG+ L E++AA +D + DG I EF WW Sbjct: 21 ENSKLMATAVAGAAMEAAKTEAAKIKNMV---LNMRDGPVSIKILSYIAGILLVVTGFFSFFGSFFTLHPVDAVVHLYMFAFGWAILLLEARSS--ILPKKIVYNIHKYCAFTTVVWGRGAFFIFVGTLALAQWV-FISILVGLYLVIIGAGMIYWGQEAYKNLDALHGEMKNPEVVEGMFRKFDHNQDGVLDVTELGNLLESLGAMLRPTEVEAACIIMDTDNDGKISLAEFQGWW 251
BLAST of NO08G04070 vs. NCBI_GenBank
Match: GAX18629.1 (hypothetical protein FisN_10Hh163 [Fistulifera solaris]) HSP 1 Score: 96.3 bits (238), Expect = 1.500e-16 Identity = 58/212 (27.36%), Postives = 108/212 (50.94%), Query Frame = 0 Query: 35 LETLRRDGCLPLKTIGFFTGMALTIIACLTFASKLLDLNVVGAINQVWLAIFGLTMMLLEASTSTNFVSKKVSRWLNENMKILTYMTGRGLFYCFLGTIELGFWFSTLHLVIGIILCVLGVVTIFVGFALGMKLRSIRRDLAREDDARKTFQDFDEDQDGRLSTSELARLCHSLGSKLTHNELQAAVTTLDVNRDGYIQEEEFLRWWRGDAE 247 ++ +R+G L + +GF G+A+ + L + + ++ V+ +FG+ ++ ++A S+K+ W++ K L Y GRGLF+ F+GT+++ + L +G + +GVV + VG A ++R +R + E ++ +++ D + DG L EL + G +T NE+ A LD N D I EEF WW +++ Sbjct: 37 IQQAQREGPLTFRILGFLGGLAMIVSNGLAILERFFSFSFARSLMAVYGVVFGVIIVFMDAPFPI-ICSQKIQTWIHSYAKFLDYTWGRGLFFFFVGTLQVSN-VNMLDWAVGGFMIFVGVVAMGVGMATANQMRLVRFAVKDETTLKEKWKEHDANGDGSLDVKELTAFVNDAGVTMTRNEIAAFYLALDKNFDQKIAYEEFYAWWTRESD 246
BLAST of NO08G04070 vs. NCBI_GenBank
Match: GAX17300.1 (hypothetical protein FisN_10Lh163 [Fistulifera solaris]) HSP 1 Score: 90.9 bits (224), Expect = 6.200e-15 Identity = 57/212 (26.89%), Postives = 107/212 (50.47%), Query Frame = 0 Query: 35 LETLRRDGCLPLKTIGFFTGMALTIIACLTFASKLLDLNVVGAINQVWLAIFGLTMMLLEASTSTNFVSKKVSRWLNENMKILTYMTGRGLFYCFLGTIELGFWFSTLHLVIGIILCVLGVVTIFVGFALGMKLRSIRRDLAREDDARKTFQDFDEDQDGRLSTSELARLCHSLGSKLTHNELQAAVTTLDVNRDGYIQEEEFLRWWRGDAE 247 ++ +++G L + +GF G+A+ + L + + ++ V+ IFG+ ++ ++A S+K+ ++ K L Y GRGLF+ F+GT+++ + L +G + +GVV + VG A ++R +R + E ++ +++ D + DG L EL + G +T NE+ A LD N D I EEF WW +++ Sbjct: 37 IQQAQKEGPLTFRILGFLGGLAMIVSNGLAILERFFSFSFARSLMAVYGVIFGVIIVFMDAPFPI-ICSQKIQTGIHSYAKFLDYTWGRGLFFFFVGTLQVSN-VNMLDWAVGGFMIFVGVVAMGVGMATANQMRLVRFAVKDESTLKQKWKEHDANGDGSLDVKELTAFVNDAGVTMTRNEIAAFYLALDKNFDQRIAYEEFYAWWTRESD 246
BLAST of NO08G04070 vs. NCBI_GenBank
Match: XP_009037623.1 (hypothetical protein AURANDRAFT_64743 [Aureococcus anophagefferens] >EGB07625.1 hypothetical protein AURANDRAFT_64743 [Aureococcus anophagefferens]) HSP 1 Score: 85.5 bits (210), Expect = 2.600e-13 Identity = 68/246 (27.64%), Postives = 117/246 (47.56%), Query Frame = 0 Query: 12 GSPGSASNLDKPNTSAKV-----KQMTWLETLRRDGCLPLKTIGFFTGMALTIIACLTFASKLLDLNVVGAINQVWLAIFGLTMMLLEA-STSTNFVSKK----VSRW---LNENMKILTYMTGRGLFYCFLGTIELGFWFSTLHLVIGIILCVLGVVTIFVGFALGMKLRSIRRDLAREDDARKTFQDFDEDQDGRLSTSELARLCHSLGSKLTHNELQAAVTTLDVNRDGYIQEEEFLRWWRGD 245 G G S +D +A + +Q L+ +G + L T+G + +++CL ++ L+ A+ V+ GL ++ LE + F + RW L +LT +TGR L Y F+G++ L S L ++G +G ++V + KLR + A E++ F D D+DG+L+ SEL LC + G+ L E+++A+ LD + G + EEF+ W++GD Sbjct: 5 GEYGGVSTVDTSAVAASIGAQVSQQAQELKRSVVNGSVELSTLGSIGAVLSVVVSCLNVLGNIVKLSPTRAVLMVYCFGGGLALLALEGMHNAPPFAPPSALAFLRRWKLKLRTEAHVLTTLTGRSLGYVFVGSLLLADGGSWLGALVGFYCVFVGGAMLYVARSAVAKLRDLLPG-ASEEELLAQFDAHDADRDGKLAGSELGALCAACGAALAPREVESALRILDTDGSGLVDREEFVAWFKGD 249
BLAST of NO08G04070 vs. NCBI_GenBank
Match: XP_014154214.1 (hypothetical protein SARC_07325 [Sphaeroforma arctica JP610] >KNC80312.1 hypothetical protein SARC_07325 [Sphaeroforma arctica JP610]) HSP 1 Score: 84.7 bits (208), Expect = 4.400e-13 Identity = 58/184 (31.52%), Postives = 89/184 (48.37%), Query Frame = 0 Query: 69 LLDLNVVGAINQVWLAIFGLTMMLLEASTSTNFVSKKVSRWLNENMKILTYMTGRGLFYCFLGTIELGFWFSTLHLVIGIILCVLGVVTIFVGFALGMKLRSIRRDLAREDDARKTFQDFDEDQDGRLSTSELARLCHSLGSKLTHNELQAAV-----------TTLDVNRDGYIQEEEFLRWW 242 L+ L+ + + + FG ++ LE S F+ K + N LT + GR FY F+GT+ L W + ++ G +L G+V + G KL S++R++ + R+ F D D +G L T E+A LC SLG+ L+ EL+ A+ LD N DG + EEF WW Sbjct: 13 LIRLSPITMVIYAYCVFFGFVILALE--VSPRFMPKSWVVAVRTNALFLTRLHGRAFFYIFVGTLMLAQW-HWMQMMSGGLLIFTGIVMMISGGVANKKLNSLKREMTDPQEVRENFYAHDLDGNGALDTKEVAALCASLGTVLSRVELERALMCPSNNSLTFQQLLDSNHDGMVSYEEFYNWW 193
BLAST of NO08G04070 vs. NCBI_GenBank
Match: GBG26849.1 (Calmodulin [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 73.6 bits (179), Expect = 1.000e-9 Identity = 61/207 (29.47%), Postives = 90/207 (43.48%), Query Frame = 0 Query: 42 GCLPLKTIGFFTGMALTIIACLTFASKLLDLNVVGAINQVWLAIFGLTMMLLEASTSTNFVSKKVSRWLNENMKILTYMTGRGLFYCFLGTIELGFWFSTLHLVIGIILCVLGVVTIFVGFALGMKLRSIRRDLAR--EDD---ARKTFQDFDEDQDGRLSTSELARLCHSLGSKLTHNELQAAVTTLDVNRDGYIQEEEFLRWWRG 244 G +PLK I + + ++ + I ++ A F +LLE + + + W+N +K+LT + GRGLFY F G I L + G L G+ + V KL + + + DD R+ F +D+D +G LS ELA C LG+ NEL A LD + G + EEF RWW G Sbjct: 38 GPVPLKGICLVSCCVAIAFDAFALIADFFTIHPMKFILTLYAATFAFLGLLLEFN---HMYCGPLKAWINVWLKLLTRVWGRGLFYIFAGGIHLSL-KGLFGYLCGFTLLGSGIACLIVSRVASRKLTKLHDRIVQGHTDDLVYVRQVFNRYDKDNNGSLSVPELAACCKELGTDFAANELVAIFEYLDKDFSGKLSYEEFERWWTG 240
BLAST of NO08G04070 vs. NCBI_GenBank
Match: XP_024173169.1 (probable calcium-binding protein CML27 [Rosa chinensis] >PRQ15911.1 putative EF-hand domain pair protein [Rosa chinensis]) HSP 1 Score: 64.7 bits (156), Expect = 4.700e-7 Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = 0 Query: 179 DDARKTFQDFDEDQDGRLSTSELARLCHSLGSKLTHNELQAAVTTLDVNRDGYIQEEEFLRWW----RGDAELKKPIEV 254 D+ R+ F+ FD + DG++STSEL + +LGS + +ELQ + LD +RDG+I +EF +W G +ELK+ ++ Sbjct: 20 DEVRRVFKSFDANGDGKISTSELGNVLEALGSNVPEDELQRVMVDLDTDRDGFICLDEFNAFWVAGDGGSSELKEAFDL 98 The following BLAST results are available for this feature:
BLAST of NO08G04070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G04070 ID=NO08G04070|Name=NO08G04070|organism=Nannochloropsis oceanica|type=gene|length=2681bpback to top protein sequence of NO08G04070.2 >NO08G04070.2-protein ID=NO08G04070.2-protein|Name=NO08G04070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=261bpback to top protein sequence of NO08G04070.1 >NO08G04070.1-protein ID=NO08G04070.1-protein|Name=NO08G04070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=254bpback to top Synonyms
Publications
|