NO08G03880, NO08G03880 (gene) Nannochloropsis oceanica

Overview
NameNO08G03880
Unique NameNO08G03880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length918
Alignment locationchr8:1093731..1094648 -

Link to JBrowse

Properties
Property NameValue
DescriptionUrease accessory protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:1093731..1094648 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016151nickel cation binding
GO:0016151nickel cation binding
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
GO:0006807nitrogen compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR002639UreF
Homology
BLAST of NO08G03880 vs. NCBI_GenBank
Match: EWM26850.1 (urease accessory protein [Nannochloropsis gaditana])

HSP 1 Score: 326.6 bits (836), Expect = 8.100e-86
Identity = 181/301 (60.13%), Postives = 223/301 (74.09%), Query Frame = 0
Query:   15 VSSSPPSPALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQNRRWLCHARDQVRGRPPAK----AAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGAR------REERREPRQDNPLLDILQGAHEKLYSRLFIS 306
            + S  PS  ++W +WQ++DSNLPTGGFAHSYGLEAA+Q+  F+L+   S D+E RV GLL FARQT++QQA LLLP+V AA+ AA+      +  +   S+  +V  WA+LD++CHAL+TTEGGRRAS +QG ALLRLACDN P++S Q+ +WL  ARD +RGR   +    AAG SE    +    +L  +GHQAP+FGWLC+ALGVD +T  RMFCYLVLRDLMAAATRLGLVGPL AVRLQM +Y DAEA+V R LE+ A       +E  R PRQ+NPLLDILQGAHEKLYSRLFIS
Sbjct:    1 MESYAPS-TVSWVIWQLLDSNLPTGGFAHSYGLEAALQLKHFDLQ---SVDEEMRVTGLLAFARQTMEQQASLLLPMVSAAHHAAKDATALLK-CTDAGSSVSMVSRWATLDKECHALITTEGGRRASTAQGLALLRLACDNIPSLSSQHCQWLRTARDLIRGRVGYRYRDDAAGESESLGVSHDMSILSARGHQAPVFGWLCQALGVDAVTCFRMFCYLVLRDLMAAATRLGLVGPLAAVRLQMTLYGDAEAVVGRFLEQEASERATGGKEGGRGPRQENPLLDILQGAHEKLYSRLFIS 296          
BLAST of NO08G03880 vs. NCBI_GenBank
Match: EFJ26720.1 (hypothetical protein SELMODRAFT_97029 [Selaginella moellendorffii] >EFJ27010.1 hypothetical protein SELMODRAFT_96579 [Selaginella moellendorffii])

HSP 1 Score: 151.4 bits (381), Expect = 4.600e-33
Identity = 106/280 (37.86%), Postives = 136/280 (48.57%), Query Frame = 0
Query:   26 WCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306
            W VWQ++DS  PTGGFAHSYGLEAA+Q G        S  K      L  F + T++    LLLP V A++                    P V  W  LDR  +A L+    RRAS SQG ALLR A   +P ++      L   R  VR            GR            GH A +FG +C  L +D +T  R + YL LRD+++AATRL LVGPLQA  +Q  +    EA+V +C + G       +  Q +PLLD  Q  H+ L+SRLF S
Sbjct:   13 WVVWQLVDSFFPTGGFAHSYGLEAAVQAGL------VSDSK-----SLDTFIKSTLENSGSLLLPFVSASFKL------------------PDVAGWIELDRLLNATLSNHVARRASSSQGSALLRTAATVYPDLAE-----LGELRGVVRA-----------GR----------ASGHHAGVFGIVCGLLKLDALTCQRAYLYLTLRDVLSAATRLNLVGPLQAAAMQQSLRGFGEAVVRKCADRGV-----EDACQVSPLLDTAQACHDHLFSRLFCS 232          
BLAST of NO08G03880 vs. NCBI_GenBank
Match: XP_024532835.1 (urease accessory protein F [Selaginella moellendorffii] >XP_002972093.2 urease accessory protein F [Selaginella moellendorffii] >XP_002972634.2 urease accessory protein F [Selaginella moellendorffii])

HSP 1 Score: 151.4 bits (381), Expect = 4.600e-33
Identity = 106/280 (37.86%), Postives = 136/280 (48.57%), Query Frame = 0
Query:   26 WCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306
            W VWQ++DS  PTGGFAHSYGLEAA+Q G        S  K      L  F + T++    LLLP V A++                    P V  W  LDR  +A L+    RRAS SQG ALLR A   +P ++      L   R  VR            GR            GH A +FG +C  L +D +T  R + YL LRD+++AATRL LVGPLQA  +Q  +    EA+V +C + G       +  Q +PLLD  Q  H+ L+SRLF S
Sbjct:   30 WVVWQLVDSFFPTGGFAHSYGLEAAVQAGL------VSDSK-----SLDTFIKSTLENSGSLLLPFVSASFKL------------------PDVAGWIELDRLLNATLSNHVARRASSSQGSALLRTAATVYPDLAE-----LGELRGVVRA-----------GR----------ASGHHAGVFGIVCGLLKLDALTCQRAYLYLTLRDVLSAATRLNLVGPLQAAAMQQSLRGFGEAVVRKCADRGV-----EDACQVSPLLDTAQACHDHLFSRLFCS 249          
BLAST of NO08G03880 vs. NCBI_GenBank
Match: XP_015626164.1 (PREDICTED: urease accessory protein F isoform X1 [Oryza sativa Japonica Group] >XP_015626166.1 PREDICTED: urease accessory protein F isoform X1 [Oryza sativa Japonica Group] >BAF07923.1 Os02g0168000 [Oryza sativa Japonica Group] >BAG97786.1 unnamed protein product [Oryza sativa Japonica Group] >BAS77169.1 Os02g0168000 [Oryza sativa Japonica Group])

HSP 1 Score: 142.5 bits (358), Expect = 2.200e-30
Identity = 111/299 (37.12%), Postives = 146/299 (48.83%), Query Frame = 0
Query:    6 PLPPASLNQVSSSPPSPALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTI-SPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLF 304
            P   AS+NQ S         W  WQ++DS LPTGGFAHSYGLEAAMQ          +  +E R      F  Q ++    LLLP V  A               SP +A      W  LD+   A+LT E  R+AS+SQG ALLR+A   F  I S Q+ R               +   GS+            V  H AP+FG +C  +G D  TT R + ++ +RD+++AATRL L+GPL A  LQ  + +DAE +V +  + G       E  Q +PLLD LQG H  ++SRLF
Sbjct:   60 PTNAASMNQHS--------LWSQWQLLDSILPTGGFAHSYGLEAAMQSRM------VNNPEELR-----SFVVQVLENTGSLLLPFVCCA-------------NKSPDAA-----TWVKLDQLLEAMLTNEVSRKASMSQGSALLRVAASVFTEIQSLQDLR---------------QTFLGSK-----------IVSFHHAPIFGLICGLVGFDSETTQRAYMFVTMRDVISAATRLNLIGPLAASVLQHQVAEDAERMVQKWKDRGV-----EEATQTSPLLDALQGCHAYMFSRLF 290          
BLAST of NO08G03880 vs. NCBI_GenBank
Match: XP_015626167.1 (PREDICTED: urease accessory protein F isoform X2 [Oryza sativa Japonica Group] >E0ZS46.1 RecName: Full=Urease accessory protein F; Short=AtUREF >Q0E3L5.2 RecName: Full=Urease accessory protein F; Short=AtUREF >ADK73997.1 UreF [Oryza sativa Indica Group] >BAS77170.1 Os02g0168000 [Oryza sativa Japonica Group])

HSP 1 Score: 142.5 bits (358), Expect = 2.200e-30
Identity = 111/299 (37.12%), Postives = 146/299 (48.83%), Query Frame = 0
Query:    6 PLPPASLNQVSSSPPSPALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTI-SPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLF 304
            P   AS+NQ S         W  WQ++DS LPTGGFAHSYGLEAAMQ          +  +E R      F  Q ++    LLLP V  A               SP +A      W  LD+   A+LT E  R+AS+SQG ALLR+A   F  I S Q+ R               +   GS+            V  H AP+FG +C  +G D  TT R + ++ +RD+++AATRL L+GPL A  LQ  + +DAE +V +  + G       E  Q +PLLD LQG H  ++SRLF
Sbjct:   29 PTNAASMNQHS--------LWSQWQLLDSILPTGGFAHSYGLEAAMQSRM------VNNPEELR-----SFVVQVLENTGSLLLPFVCCA-------------NKSPDAA-----TWVKLDQLLEAMLTNEVSRKASMSQGSALLRVAASVFTEIQSLQDLR---------------QTFLGSK-----------IVSFHHAPIFGLICGLVGFDSETTQRAYMFVTMRDVISAATRLNLIGPLAASVLQHQVAEDAERMVQKWKDRGV-----EEATQTSPLLDALQGCHAYMFSRLF 259          
BLAST of NO08G03880 vs. NCBI_GenBank
Match: XP_020150594.1 (urease accessory protein F [Aegilops tauschii subsp. tauschii] >XP_020150595.1 urease accessory protein F [Aegilops tauschii subsp. tauschii] >XP_020150596.1 urease accessory protein F [Aegilops tauschii subsp. tauschii] >XP_020150597.1 urease accessory protein F [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 142.1 bits (357), Expect = 2.800e-30
Identity = 110/298 (36.91%), Postives = 142/298 (47.65%), Query Frame = 0
Query:   10 ASLNQVSSSPPS--PALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306
            ++++QV ++  S    L W  WQ++DS LPTGGFAHSYGLEAAMQ            ++E     L +F  Q V     LLLP V  A                  S  P   AW  LD+   A LT E GR+AS SQG ALLR+A   F  I P     L   R    G                       V  H AP+FG +C  +G D  TT R + ++ +RD+++AATRL L+GPL A  LQ  +  DAE ++ +      R  +  E  Q  PLLD LQG H  ++SRLF S
Sbjct:   19 SAISQVPATASSMHQQLFWSQWQLLDSILPTGGFAHSYGLEAAMQ-------SRIVNNQE----DLRLFLIQVVDNIGSLLLPFVFCA------------------SRSPDAAAWVKLDQLLDATLTNEVGRKASTSQGSALLRVAASVFTEIQP-----LQDLRRTFLGS--------------------TSVSFHHAPIFGLICGLVGFDSETTQRAYMFVAMRDVISAATRLNLIGPLAASVLQHQVAPDAEKMLQKW-----RDRDVSEASQTAPLLDALQGCHAYMFSRLFCS 257          
BLAST of NO08G03880 vs. NCBI_GenBank
Match: EEC72566.1 (hypothetical protein OsI_06004 [Oryza sativa Indica Group] >EEE56386.1 hypothetical protein OsJ_05531 [Oryza sativa Japonica Group])

HSP 1 Score: 141.7 bits (356), Expect = 3.700e-30
Identity = 105/279 (37.63%), Postives = 139/279 (49.82%), Query Frame = 0
Query:   26 WCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTI-SPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLF 304
            W  WQ++DS LPTGGFAHSYGLEAAMQ          +  +E R      F  Q ++    LLLP V  A               SP +A      W  LD+   A+LT E  R+AS+SQG ALLR+A   F  I S Q+ R               +   GS+            V  H AP+FG +C  +G D  TT R + ++ +RD+++AATRL L+GPL A  LQ  + +DAE +V +  + G       E  Q +PLLD LQG H  ++SRLF
Sbjct:    7 WSQWQLLDSILPTGGFAHSYGLEAAMQSRM------VNNPEELR-----SFVVQVLENTGSLLLPFVCCA-------------NKSPDAA-----TWVKLDQLLEAMLTNEVSRKASMSQGSALLRVAASVFTEIQSLQDLR---------------QTFLGSK-----------IVSFHHAPIFGLICGLVGFDSETTQRAYMFVTMRDVISAATRLNLIGPLAASVLQHQVAEDAERMVQKWKDRGV-----EEATQTSPLLDALQGCHAYMFSRLF 225          
BLAST of NO08G03880 vs. NCBI_GenBank
Match: PAN04215.1 (hypothetical protein PAHAL_A00431 [Panicum hallii] >PAN04216.1 hypothetical protein PAHAL_A00431 [Panicum hallii])

HSP 1 Score: 141.7 bits (356), Expect = 3.700e-30
Identity = 104/285 (36.49%), Postives = 131/285 (45.96%), Query Frame = 0
Query:   23 ALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQN--RRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306
            +L W  WQ++DS LPTGGFAHSYGLEAAMQ                    L  F  Q ++    LLLP V  A                  S  P   AW  LD+   A LT E GR+AS SQG ALLR+A   F  I      RR L  +++                           V  H AP+FG +C  +G D  T  R + ++ +RD+ +AATRL L+GPL A  LQ  +  DAE +V +      R  +  E  Q  PLLD LQG H  ++SRLF S
Sbjct:   36 SLHWTQWQVLDSILPTGGFAHSYGLEAAMQSRMVN-----------NQEDLRSFVIQVLENTGSLLLPFVYCA------------------SKSPDTAAWVKLDQLLEATLTNEVGRKASTSQGSALLRVAASVFIEIQALQDLRRTLLSSKN---------------------------VSFHHAPIFGLICGLVGFDSETVQRAYMFVTMRDVFSAATRLNLIGPLAASVLQHQVAADAERMVQKW-----RDRDVSEASQTAPLLDALQGCHAYMFSRLFCS 259          
BLAST of NO08G03880 vs. NCBI_GenBank
Match: NP_001339368.1 (urease accessory protein F [Zea mays] >XP_008643580.1 urease accessory protein F isoform X1 [Zea mays] >XP_008643581.1 urease accessory protein F isoform X1 [Zea mays] >ACF86859.1 unknown [Zea mays] >AQK68715.1 Urease accessory protein F [Zea mays])

HSP 1 Score: 141.4 bits (355), Expect = 4.800e-30
Identity = 111/297 (37.37%), Postives = 146/297 (49.16%), Query Frame = 0
Query:    9 PASLNQVSSSPPSPALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTISPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306
            P+S N  ++   + +L W  WQ++DS LPTGGFAHSYGLEAAMQ            D+E     L  F  Q +     LLLP V  A A           G SP  A     AWA LDR   A LT E  R+AS +QG ALLR+A   F  +          A  ++R     +   GS+            V  H AP+FG +C  +G D  T  R + ++ +RD+++AATRL L+GPL A  LQ  +  DAE +V +      R  +  E  Q  PLLD +QG H  ++SRLF S
Sbjct:   27 PSSSN--AAGGVNQSLHWTQWQILDSILPTGGFAHSYGLEAAMQ-------SRVVNDQE----DLRSFVVQVLDSAGSLLLPFVHCACA-----------GKSPGDA----AAWAKLDRLLDATLTNEVARKASAAQGSALLRVAASVFAEVP---------ALQELR-----RTLLGSKS-----------VSFHHAPVFGLVCGLVGFDGETAQRAYMFVTMRDVLSAATRLNLIGPLAASVLQHQLAPDAERMVRKW-----RDRDVSEASQTAPLLDAVQGCHAYMFSRLFCS 265          
BLAST of NO08G03880 vs. NCBI_GenBank
Match: BAK02553.1 (predicted protein, partial [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 140.6 bits (353), Expect = 8.200e-30
Identity = 111/295 (37.63%), Postives = 143/295 (48.47%), Query Frame = 0
Query:   16 SSSPPSPALAWCVWQMMDSNLPTGGFAHSYGLEAAMQMGQFELKGGASGDKEARVAG----LLVFARQTVQQQAMLLLPLVRAAYAAAEAMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALLRLACDNFPTI-SPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLPVKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQAVRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYSRLFIS 306
            +SS  +  L W  WQ++DS LPTGGFAHSYGLEAAMQ               +R+      L +F  Q +     LLLP V  A             G SP +A     AW  LD+   A LT E GR+AS SQG ALLR+A   F  I S Q+ R               +   GS             V  H AP+FG +C  +G D  TT R + ++ +RD+++AATRL L+GPL A  LQ  +  DAE ++ +      R  +  E  Q  PLLD LQG H  ++SRLF S
Sbjct:   38 ASSSMNQQLFWSQWQLLDSILPTGGFAHSYGLEAAMQ---------------SRIVNNPEDLWLFLIQVLDNIGSLLLPFVYCA-------------GRSPDAA-----AWVKLDQLLDATLTNEVGRKASTSQGSALLRVAASVFTEIQSLQDLR---------------RTFLGSTS-----------VSFHHAPIFGLICGLVGFDSETTQRAYMFVAMRDVISAATRLNLIGPLAASVLQHQVAPDAEKMLQKW-----RDRDVSEASQTAPLLDALQGCHAYMFSRLFCS 268          
The following BLAST results are available for this feature:
BLAST of NO08G03880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26850.18.100e-8660.13urease accessory protein [Nannochloropsis gaditana... [more]
EFJ26720.14.600e-3337.86hypothetical protein SELMODRAFT_97029 [Selaginella... [more]
XP_024532835.14.600e-3337.86urease accessory protein F [Selaginella moellendor... [more]
XP_015626164.12.200e-3037.12PREDICTED: urease accessory protein F isoform X1 [... [more]
XP_015626167.12.200e-3037.12PREDICTED: urease accessory protein F isoform X2 [... [more]
XP_020150594.12.800e-3036.91urease accessory protein F [Aegilops tauschii subs... [more]
EEC72566.13.700e-3037.63hypothetical protein OsI_06004 [Oryza sativa Indic... [more]
PAN04215.13.700e-3036.49hypothetical protein PAHAL_A00431 [Panicum hallii]... [more]
NP_001339368.14.800e-3037.37urease accessory protein F [Zea mays] >XP_00864358... [more]
BAK02553.18.200e-3037.63predicted protein, partial [Hordeum vulgare subsp.... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008611NSK008611Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03880.1NO08G03880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100097g13gene3684Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03880.1NO08G03880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03880 ID=NO08G03880|Name=NO08G03880|organism=Nannochloropsis oceanica|type=gene|length=918bp
ATGGACGAAGTCCTGCCGCTGCCGCCGGCCTCCCTAAACCAAGTTTCCTC
CTCCCCTCCCTCGCCCGCCCTGGCCTGGTGCGTCTGGCAAATGATGGATT
CTAACTTGCCCACCGGCGGCTTTGCACATTCCTACGGCCTCGAGGCCGCG
ATGCAGATGGGGCAGTTCGAACTCAAGGGGGGCGCGAGCGGGGACAAGGA
GGCCCGCGTTGCGGGGTTGCTTGTCTTTGCCCGCCAGACCGTGCAGCAAC
AGGCCATGCTCCTCTTGCCCTTGGTTCGGGCGGCGTACGCCGCCGCTGAA
GCCATGGAAGTACCAGGCAGACCTGGATCTTCTCCTCCATCAGCACAACC
TCTTGTCATGGCATGGGCAAGTCTAGACCGTCAGTGCCACGCCCTGCTAA
CCACCGAGGGTGGGCGTCGTGCTTCAGTCTCGCAGGGCCAAGCATTGCTT
CGTCTAGCCTGCGATAATTTCCCCACTATTTCTCCCCAAAATCGACGATG
GCTTTGTCATGCAAGGGACCAAGTGCGAGGACGACCACCAGCAAAAGCAG
CGGGGGGAAGCGAAGGAAGAAATGGAGCAGTACCACCACAACTTCTCCCC
GTTAAGGGTCACCAGGCCCCTCTCTTTGGCTGGCTTTGTCGAGCCTTGGG
GGTGGACGTAATCACAACGTCCCGCATGTTTTGTTACTTGGTGCTGCGTG
ATTTGATGGCCGCAGCGACGAGGCTTGGGCTTGTCGGACCTTTGCAGGCA
GTGCGGTTGCAAATGTTAATGTACCAGGACGCCGAGGCCATTGTGACGCG
GTGCCTGGAGGAGGGAGCAAGAAGAGAGGAAAGACGGGAACCACGACAAG
ATAATCCTTTGCTGGATATCTTGCAGGGTGCGCACGAGAAATTGTATTCG
CGATTGTTCATAAGTTGA
back to top

protein sequence of NO08G03880.1

>NO08G03880.1-protein ID=NO08G03880.1-protein|Name=NO08G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bp
MDEVLPLPPASLNQVSSSPPSPALAWCVWQMMDSNLPTGGFAHSYGLEAA
MQMGQFELKGGASGDKEARVAGLLVFARQTVQQQAMLLLPLVRAAYAAAE
AMEVPGRPGSSPPSAQPLVMAWASLDRQCHALLTTEGGRRASVSQGQALL
RLACDNFPTISPQNRRWLCHARDQVRGRPPAKAAGGSEGRNGAVPPQLLP
VKGHQAPLFGWLCRALGVDVITTSRMFCYLVLRDLMAAATRLGLVGPLQA
VRLQMLMYQDAEAIVTRCLEEGARREERREPRQDNPLLDILQGAHEKLYS
RLFIS*
back to top
Synonyms
Publications