NO08G03490, NO08G03490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_002953694.1 (prohibitin [Volvox carteri f. nagariensis] >EFJ45318.1 prohibitin [Volvox carteri f. nagariensis]) HSP 1 Score: 287.0 bits (733), Expect = 7.300e-74 Identity = 144/258 (55.81%), Postives = 192/258 (74.42%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEE 308 G +AG NS + VEGGHRA++FNRL+G+K+ VY EG HIM+PWFE P+IYD+R +P +IQS +GSKD+QMVN+ +RVL++P+ +L I+RTLG DY ERVLPSI+ E K+V+A+YNA++LLT+RE+VS IR L +RA+ F I+L+DVSIT+LTFS+EYT AVEAKQVAQQEAER SA L+G+A+++NPAF+ LRKI+AAR+IA+ +S S KVYL ADSLLL++ +E Sbjct: 26 GATVWAGTNSLFNVEGGHRAVVFNRLMGIKDTVYQEGTHIMVPWFERPIIYDVRARPSVIQSQSGSKDLQMVNVGLRVLTRPNPDKLPEIYRTLGTDYAERVLPSIIQETLKSVIAQYNASQLLTQREVVSRDIRRILTERARYFNIILEDVSITNLTFSKEYTAAVEAKQVAQQEAERAKFIVEKALQEKQSAIVRAQGEAQSAKLIGEAVKQNPAFLTLRKIEAAREIASTISQSANKVYLGADSLLLSVNQAGKE 283
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_020436513.1 (prohibitin [Heterostelium album PN500] >EFA84399.1 prohibitin [Heterostelium album PN500]) HSP 1 Score: 285.4 bits (729), Expect = 2.100e-73 Identity = 145/252 (57.54%), Postives = 182/252 (72.22%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNM 302 GV Y +NS VEGGHRA++FNR +G+K VY EG H +IPW E P IYD+R KPR I SLTGSKD+QMVN+TIRVLSKP L I+RTLGKDYDERVLPSIVNEV K++VA++NA++L+T+RE VS I +L RA++F I LDDVSITHL F +EY A+E+KQVAQQ+AER SA L+ +IRENPAF++LRKI+AAR+IA +++ S KVY+S+DSLLLN+ Sbjct: 32 GVALYGAFNSLLNVEGGHRAIVFNRFVGIKNRVYNEGTHFVIPWIERPEIYDVRAKPRSISSLTGSKDLQMVNVTIRVLSKPSIKYLPEIYRTLGKDYDERVLPSIVNEVLKSIVAQFNASQLITQREQVSRLIYKRLVDRARDFHIELDDVSITHLNFGKEYAAAIESKQVAQQDAERARFLVEKATQDKRSIIVKAEGESQSAKLISDSIRENPAFLQLRKIEAAREIAQIIAKSQNKVYISSDSLLLNL 283
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_024376787.1 (prohibitin-1, mitochondrial-like [Physcomitrella patens] >PNR53639.1 hypothetical protein PHYPA_007314 [Physcomitrella patens]) HSP 1 Score: 285.0 bits (728), Expect = 2.800e-73 Identity = 148/263 (56.27%), Postives = 192/263 (73.00%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMY-TGDEEKGAK 312 G+ YA NS Y VEGGHRA++FNR++GVK++VY EG H MIPWF+ PVIYD+R +P +++S +GS+D+QMV IT+RVL++P A +L I+RTLG+DY ERVLPS+V E KAVVA+YNA++L+T+RE+VS +IR L++RA F I LDDVSIT+LTF RE+T A+EAKQVA Q+AER SA L+G AI NPAFI LRKI+A+R+IAN +S S +V+LSADSLLLN+ G EE G K Sbjct: 28 GIGVYAAVNSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHFMIPWFDRPVIYDVRARPNIVESTSGSRDLQMVRITLRVLTRPMADRLPTIYRTLGQDYAERVLPSVVQETLKAVVAQYNASQLITQREVVSREIRRILQERATSFDIALDDVSITNLTFGREFTAAIEAKQVAAQDAERAKFVVEKAEQDKKSAIIRAQGEAKSAQLIGDAISNNPAFITLRKIEASREIANTISTSQNRVFLSADSLLLNLQDMGVEEIGLK 290
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_002287026.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED96667.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 285.0 bits (728), Expect = 2.800e-73 Identity = 145/251 (57.77%), Postives = 184/251 (73.31%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLN 301 G + Y YNS +TV+GGHRA++FNRLLG+K +Y EG++ IPWFE PVIYDIR +P +Q+LTGSKD+QMV I IRVL +PD +QL WI+R LG +YDER+LPS++NE +KAVVA+Y+A ELLTKRE VS+ I +L RA F ++L+DV+ITHL FS EY AVEAKQVAQQ+A R SA L+G A+R NP F+KLR+IDAA+DIA++V+ SG KVYL+ADSLLLN Sbjct: 8 GGLGYGAYNSVFTVDGGHRAVVFNRLLGMKPTIYNEGLNFNIPWFEWPVIYDIRTRPVNLQTLTGSKDLQMVTIGIRVLHRPDPNQLVWIYRHLGLNYDERILPSLMNECAKAVVARYDANELLTKREQVSAAISAELRLRAGGFNVLLEDVAITHLAFSPEYAKAVEAKQVAQQDANRAKYIVLGAQQEKKTIITKARGEAESAELIGSAVRRNPGFMKLRRIDAAKDIADIVAGSGNKVYLNADSLLLN 258
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_001701753.1 (prohibitin [Chlamydomonas reinhardtii] >PNW86476.1 hypothetical protein CHLRE_02g088000v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 283.5 bits (724), Expect = 8.000e-73 Identity = 141/252 (55.95%), Postives = 189/252 (75.00%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNM 302 G +AG NS + VEGGHRA++FNR++G+K+ VY EG HIM+PWFE PV+YD+R +P +IQS +GSKD+QMVN+ +RVL++P+A +L I+RTLG DY ERVLPSI+ E K+V+A+YNA++L+T RE+VS IR L +RA+ F I+L+DVSIT+LTFS+EYT AVEAKQVAQQEAER SA L+G+A+++NPAF+ LRKI+AAR+IA +S S KVYL +DSLLL++ Sbjct: 27 GATLWAGANSLFNVEGGHRAIVFNRVVGIKDTVYAEGTHIMVPWFERPVLYDVRARPSVIQSQSGSKDLQMVNVGLRVLTRPNADKLPEIYRTLGTDYAERVLPSIIQETLKSVIAQYNASQLITMREVVSRDIRRILTERARYFNIILEDVSITNLTFSKEYTAAVEAKQVAQQEAERAKFIVDKALQEKQSAIVRAQGEAQSAKLIGEAVKQNPAFLTLRKIEAAREIAGTISQSANKVYLGSDSLLLSV 278
BLAST of NO08G03490 vs. NCBI_GenBank
Match: KXZ47586.1 (hypothetical protein GPECTOR_34g745 [Gonium pectorale]) HSP 1 Score: 283.1 bits (723), Expect = 1.000e-72 Identity = 143/257 (55.64%), Postives = 191/257 (74.32%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDE 307 G +AG NS + VEGGHRA++FNRL+G+K+ VY EG HIM+PWFE PVIYD+R +P +IQS +GSKD+QMVN+ +RVL++P+ +L I+RTLG DY ERVLPSI+ E K+V+A+YNA++LLT+RE+VS IR L +RA+ F IVL+DVSIT+LTFS+EYT AVEAKQVAQQEAER SA L+G+A+++NPAF+ LR+I+AAR+IA+ +S S KVYL +D+LLL++ E Sbjct: 26 GATVWAGTNSLFNVEGGHRAIVFNRLVGIKDTVYQEGTHIMVPWFERPVIYDVRARPSVIQSQSGSKDLQMVNVGLRVLTRPNPDKLPEIYRTLGTDYAERVLPSIIQETLKSVIAQYNASQLLTQREVVSRDIRRILTERARFFNIVLEDVSITNLTFSKEYTAAVEAKQVAQQEAERAKFIVDKALQEKQSAIVRAQGEAQSARLIGEAVQQNPAFLTLRRIEAAREIASTISQSSNKVYLGSDALLLSVAQAGE 282
BLAST of NO08G03490 vs. NCBI_GenBank
Match: PON44437.1 (Prohibitin [Parasponia andersonii]) HSP 1 Score: 282.7 bits (722), Expect = 1.400e-72 Identity = 145/263 (55.13%), Postives = 191/263 (72.62%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAKR 313 G+ YA NS Y VEGGHRA++FNR++GVKE+VY EG HIMIPWFE PVIYD+R +P +++S +GS+D+QMV I +RVL++P A QL ++RTLG++Y+ERVLPSI++E KAVVA+YNA++L+T+RE VS +IR L +RA F I LDDVSIT LTF +E+T A+EAKQVA QEAER SA L+G+AI NPAFI LRKI+AAR+IA+ +S S KV+L++D LLLN+ + E AK+ Sbjct: 27 GIGLYAAANSLYNVEGGHRAIVFNRIVGVKEKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVADQLPSVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAANFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAIIRAEGEATSAKLIGQAIANNPAFITLRKIEAAREIAHTISNSANKVFLNSDDLLLNLQEMNLESAAKK 289
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_024379118.1 (prohibitin-1, mitochondrial-like [Physcomitrella patens] >PNR52727.1 hypothetical protein PHYPA_009102 [Physcomitrella patens]) HSP 1 Score: 282.3 bits (721), Expect = 1.800e-72 Identity = 149/266 (56.02%), Postives = 194/266 (72.93%), Query Frame = 0 Query: 48 GLGVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMY-TGDEEKGAKR 313 GLG+ Y NS Y VEGGHRA++FNR++GVK++VY EG H MIPWF+ PVIYD+R +P +++S +GS+D+QMV IT+RVL++P A +L I+RTLG+DY ERVLPSIV E KAVVA+YNA++L+T+RE+VS +IR L++RA F I LDDVSIT+LTF RE+T A+EAKQVA Q+AER SA L+G+AI NPAFI LRKI+A+R+IAN +S S +V+LSADSLLLN+ G EE K+ Sbjct: 28 GLGL--YGAVNSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHFMIPWFDRPVIYDVRARPNIVESTSGSRDLQMVRITLRVLTRPMADRLPTIYRTLGQDYAERVLPSIVQETLKAVVAQYNASQLITQREVVSREIRRILQERATSFNIALDDVSITNLTFGREFTAAIEAKQVAAQDAERAKFVVEKAEQDKRSAIIRAQGEAKSAQLIGEAISNNPAFITLRKIEASREIANTISTSQNRVFLSADSLLLNLQDMGVEEISLKQ 291
BLAST of NO08G03490 vs. NCBI_GenBank
Match: NP_001241227.1 (uncharacterized protein LOC100811958 [Glycine max] >XP_006590339.1 PREDICTED: uncharacterized protein LOC100811958 isoform X1 [Glycine max] >ACU18985.1 unknown [Glycine max] >KHN39859.1 Prohibitin-2 [Glycine soja] >KRH29314.1 hypothetical protein GLYMA_11G109400 [Glycine max] >KRH29315.1 hypothetical protein GLYMA_11G109400 [Glycine max]) HSP 1 Score: 281.6 bits (719), Expect = 3.000e-72 Identity = 144/263 (54.75%), Postives = 190/263 (72.24%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAKR 313 G+V Y NS Y VEGGHRA++FNR++GVK++VY EG HIMIPWFE PVIYD+R +P +++S +GS+D+QMV I +RVL++P QL ++RTLG++Y+ERVLPSI++E KAVVA+YNA++L+T+RE VS +IR L +RA +F I LDDVSIT LTF +E+T A+EAKQVA QEAER SA L+G+AI NPAFI LRKI+AAR+IA+ +S S KVYL++D LLLN+ + E KR Sbjct: 27 GLVVYGAANSLYNVEGGHRAIVFNRVVGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSREIRKILTQRASQFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGEAIANNPAFITLRKIEAAREIAHTISNSANKVYLNSDDLLLNLQELNLEPSGKR 289
BLAST of NO08G03490 vs. NCBI_GenBank
Match: KYP68138.1 (Prohibitin-2, partial [Cajanus cajan]) HSP 1 Score: 281.6 bits (719), Expect = 3.000e-72 Identity = 144/263 (54.75%), Postives = 188/263 (71.48%), Query Frame = 0 Query: 50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAKR 313 G+ Y NS Y VEGGHRA++FNR++GVK++VY EG HIMIPWFE PVIYD+R +P +++S +GS+D+QMV I +RVL++P QL ++RTLG++Y+ERVLPSI++E KAVVA+YNA++L+T+RE VS +IR L +RA +F I LDDVSIT LTF RE+T A+EAKQVA QEAER SA L+G+AI NPAFI LRKI+AAR+IA +S S KVYL++D LLLN+ + E KR Sbjct: 39 GLAVYGAANSLYNVEGGHRAIVFNRVIGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASQFNIALDDVSITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREIAQTISNSANKVYLNSDDLLLNLQQLNLEPSGKR 301 The following BLAST results are available for this feature:
BLAST of NO08G03490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03490 ID=NO08G03490|Name=NO08G03490|organism=Nannochloropsis oceanica|type=gene|length=1477bpback to top protein sequence of NO08G03490.1 >NO08G03490.1-protein ID=NO08G03490.1-protein|Name=NO08G03490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bpback to top Synonyms
Publications
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