NO08G03490, NO08G03490 (gene) Nannochloropsis oceanica

Overview
NameNO08G03490
Unique NameNO08G03490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1477
Alignment locationchr8:972635..974111 -

Link to JBrowse

Properties
Property NameValue
DescriptionProhibitin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:972635..974111 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036013Band_7/SPFH_dom_sf
IPR001107Band_7
IPR000163Prohibitin
Homology
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_002953694.1 (prohibitin [Volvox carteri f. nagariensis] >EFJ45318.1 prohibitin [Volvox carteri f. nagariensis])

HSP 1 Score: 287.0 bits (733), Expect = 7.300e-74
Identity = 144/258 (55.81%), Postives = 192/258 (74.42%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEE 308
            G   +AG NS + VEGGHRA++FNRL+G+K+ VY EG HIM+PWFE P+IYD+R +P +IQS +GSKD+QMVN+ +RVL++P+  +L  I+RTLG DY ERVLPSI+ E  K+V+A+YNA++LLT+RE+VS  IR  L +RA+ F I+L+DVSIT+LTFS+EYT AVEAKQVAQQEAER                        SA L+G+A+++NPAF+ LRKI+AAR+IA+ +S S  KVYL ADSLLL++    +E
Sbjct:   26 GATVWAGTNSLFNVEGGHRAVVFNRLMGIKDTVYQEGTHIMVPWFERPIIYDVRARPSVIQSQSGSKDLQMVNVGLRVLTRPNPDKLPEIYRTLGTDYAERVLPSIIQETLKSVIAQYNASQLLTQREVVSRDIRRILTERARYFNIILEDVSITNLTFSKEYTAAVEAKQVAQQEAERAKFIVEKALQEKQSAIVRAQGEAQSAKLIGEAVKQNPAFLTLRKIEAAREIASTISQSANKVYLGADSLLLSVNQAGKE 283          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_020436513.1 (prohibitin [Heterostelium album PN500] >EFA84399.1 prohibitin [Heterostelium album PN500])

HSP 1 Score: 285.4 bits (729), Expect = 2.100e-73
Identity = 145/252 (57.54%), Postives = 182/252 (72.22%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNM 302
            GV  Y  +NS   VEGGHRA++FNR +G+K  VY EG H +IPW E P IYD+R KPR I SLTGSKD+QMVN+TIRVLSKP    L  I+RTLGKDYDERVLPSIVNEV K++VA++NA++L+T+RE VS  I  +L  RA++F I LDDVSITHL F +EY  A+E+KQVAQQ+AER                        SA L+  +IRENPAF++LRKI+AAR+IA +++ S  KVY+S+DSLLLN+
Sbjct:   32 GVALYGAFNSLLNVEGGHRAIVFNRFVGIKNRVYNEGTHFVIPWIERPEIYDVRAKPRSISSLTGSKDLQMVNVTIRVLSKPSIKYLPEIYRTLGKDYDERVLPSIVNEVLKSIVAQFNASQLITQREQVSRLIYKRLVDRARDFHIELDDVSITHLNFGKEYAAAIESKQVAQQDAERARFLVEKATQDKRSIIVKAEGESQSAKLISDSIRENPAFLQLRKIEAAREIAQIIAKSQNKVYISSDSLLLNL 283          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_024376787.1 (prohibitin-1, mitochondrial-like [Physcomitrella patens] >PNR53639.1 hypothetical protein PHYPA_007314 [Physcomitrella patens])

HSP 1 Score: 285.0 bits (728), Expect = 2.800e-73
Identity = 148/263 (56.27%), Postives = 192/263 (73.00%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMY-TGDEEKGAK 312
            G+  YA  NS Y VEGGHRA++FNR++GVK++VY EG H MIPWF+ PVIYD+R +P +++S +GS+D+QMV IT+RVL++P A +L  I+RTLG+DY ERVLPS+V E  KAVVA+YNA++L+T+RE+VS +IR  L++RA  F I LDDVSIT+LTF RE+T A+EAKQVA Q+AER                        SA L+G AI  NPAFI LRKI+A+R+IAN +S S  +V+LSADSLLLN+   G EE G K
Sbjct:   28 GIGVYAAVNSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHFMIPWFDRPVIYDVRARPNIVESTSGSRDLQMVRITLRVLTRPMADRLPTIYRTLGQDYAERVLPSVVQETLKAVVAQYNASQLITQREVVSREIRRILQERATSFDIALDDVSITNLTFGREFTAAIEAKQVAAQDAERAKFVVEKAEQDKKSAIIRAQGEAKSAQLIGDAISNNPAFITLRKIEASREIANTISTSQNRVFLSADSLLLNLQDMGVEEIGLK 290          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_002287026.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED96667.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 285.0 bits (728), Expect = 2.800e-73
Identity = 145/251 (57.77%), Postives = 184/251 (73.31%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLN 301
            G + Y  YNS +TV+GGHRA++FNRLLG+K  +Y EG++  IPWFE PVIYDIR +P  +Q+LTGSKD+QMV I IRVL +PD +QL WI+R LG +YDER+LPS++NE +KAVVA+Y+A ELLTKRE VS+ I  +L  RA  F ++L+DV+ITHL FS EY  AVEAKQVAQQ+A R                        SA L+G A+R NP F+KLR+IDAA+DIA++V+ SG KVYL+ADSLLLN
Sbjct:    8 GGLGYGAYNSVFTVDGGHRAVVFNRLLGMKPTIYNEGLNFNIPWFEWPVIYDIRTRPVNLQTLTGSKDLQMVTIGIRVLHRPDPNQLVWIYRHLGLNYDERILPSLMNECAKAVVARYDANELLTKREQVSAAISAELRLRAGGFNVLLEDVAITHLAFSPEYAKAVEAKQVAQQDANRAKYIVLGAQQEKKTIITKARGEAESAELIGSAVRRNPGFMKLRRIDAAKDIADIVAGSGNKVYLNADSLLLN 258          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_001701753.1 (prohibitin [Chlamydomonas reinhardtii] >PNW86476.1 hypothetical protein CHLRE_02g088000v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 283.5 bits (724), Expect = 8.000e-73
Identity = 141/252 (55.95%), Postives = 189/252 (75.00%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNM 302
            G   +AG NS + VEGGHRA++FNR++G+K+ VY EG HIM+PWFE PV+YD+R +P +IQS +GSKD+QMVN+ +RVL++P+A +L  I+RTLG DY ERVLPSI+ E  K+V+A+YNA++L+T RE+VS  IR  L +RA+ F I+L+DVSIT+LTFS+EYT AVEAKQVAQQEAER                        SA L+G+A+++NPAF+ LRKI+AAR+IA  +S S  KVYL +DSLLL++
Sbjct:   27 GATLWAGANSLFNVEGGHRAIVFNRVVGIKDTVYAEGTHIMVPWFERPVLYDVRARPSVIQSQSGSKDLQMVNVGLRVLTRPNADKLPEIYRTLGTDYAERVLPSIIQETLKSVIAQYNASQLITMREVVSRDIRRILTERARYFNIILEDVSITNLTFSKEYTAAVEAKQVAQQEAERAKFIVDKALQEKQSAIVRAQGEAQSAKLIGEAVKQNPAFLTLRKIEAAREIAGTISQSANKVYLGSDSLLLSV 278          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: KXZ47586.1 (hypothetical protein GPECTOR_34g745 [Gonium pectorale])

HSP 1 Score: 283.1 bits (723), Expect = 1.000e-72
Identity = 143/257 (55.64%), Postives = 191/257 (74.32%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDE 307
            G   +AG NS + VEGGHRA++FNRL+G+K+ VY EG HIM+PWFE PVIYD+R +P +IQS +GSKD+QMVN+ +RVL++P+  +L  I+RTLG DY ERVLPSI+ E  K+V+A+YNA++LLT+RE+VS  IR  L +RA+ F IVL+DVSIT+LTFS+EYT AVEAKQVAQQEAER                        SA L+G+A+++NPAF+ LR+I+AAR+IA+ +S S  KVYL +D+LLL++    E
Sbjct:   26 GATVWAGTNSLFNVEGGHRAIVFNRLVGIKDTVYQEGTHIMVPWFERPVIYDVRARPSVIQSQSGSKDLQMVNVGLRVLTRPNPDKLPEIYRTLGTDYAERVLPSIIQETLKSVIAQYNASQLLTQREVVSRDIRRILTERARFFNIVLEDVSITNLTFSKEYTAAVEAKQVAQQEAERAKFIVDKALQEKQSAIVRAQGEAQSARLIGEAVQQNPAFLTLRRIEAAREIASTISQSSNKVYLGSDALLLSVAQAGE 282          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: PON44437.1 (Prohibitin [Parasponia andersonii])

HSP 1 Score: 282.7 bits (722), Expect = 1.400e-72
Identity = 145/263 (55.13%), Postives = 191/263 (72.62%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAKR 313
            G+  YA  NS Y VEGGHRA++FNR++GVKE+VY EG HIMIPWFE PVIYD+R +P +++S +GS+D+QMV I +RVL++P A QL  ++RTLG++Y+ERVLPSI++E  KAVVA+YNA++L+T+RE VS +IR  L +RA  F I LDDVSIT LTF +E+T A+EAKQVA QEAER                        SA L+G+AI  NPAFI LRKI+AAR+IA+ +S S  KV+L++D LLLN+   + E  AK+
Sbjct:   27 GIGLYAAANSLYNVEGGHRAIVFNRIVGVKEKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVADQLPSVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAANFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAIIRAEGEATSAKLIGQAIANNPAFITLRKIEAAREIAHTISNSANKVFLNSDDLLLNLQEMNLESAAKK 289          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_024379118.1 (prohibitin-1, mitochondrial-like [Physcomitrella patens] >PNR52727.1 hypothetical protein PHYPA_009102 [Physcomitrella patens])

HSP 1 Score: 282.3 bits (721), Expect = 1.800e-72
Identity = 149/266 (56.02%), Postives = 194/266 (72.93%), Query Frame = 0
Query:   48 GLGVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMY-TGDEEKGAKR 313
            GLG+  Y   NS Y VEGGHRA++FNR++GVK++VY EG H MIPWF+ PVIYD+R +P +++S +GS+D+QMV IT+RVL++P A +L  I+RTLG+DY ERVLPSIV E  KAVVA+YNA++L+T+RE+VS +IR  L++RA  F I LDDVSIT+LTF RE+T A+EAKQVA Q+AER                        SA L+G+AI  NPAFI LRKI+A+R+IAN +S S  +V+LSADSLLLN+   G EE   K+
Sbjct:   28 GLGL--YGAVNSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHFMIPWFDRPVIYDVRARPNIVESTSGSRDLQMVRITLRVLTRPMADRLPTIYRTLGQDYAERVLPSIVQETLKAVVAQYNASQLITQREVVSREIRRILQERATSFNIALDDVSITNLTFGREFTAAIEAKQVAAQDAERAKFVVEKAEQDKRSAIIRAQGEAKSAQLIGEAISNNPAFITLRKIEASREIANTISTSQNRVFLSADSLLLNLQDMGVEEISLKQ 291          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: NP_001241227.1 (uncharacterized protein LOC100811958 [Glycine max] >XP_006590339.1 PREDICTED: uncharacterized protein LOC100811958 isoform X1 [Glycine max] >ACU18985.1 unknown [Glycine max] >KHN39859.1 Prohibitin-2 [Glycine soja] >KRH29314.1 hypothetical protein GLYMA_11G109400 [Glycine max] >KRH29315.1 hypothetical protein GLYMA_11G109400 [Glycine max])

HSP 1 Score: 281.6 bits (719), Expect = 3.000e-72
Identity = 144/263 (54.75%), Postives = 190/263 (72.24%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAKR 313
            G+V Y   NS Y VEGGHRA++FNR++GVK++VY EG HIMIPWFE PVIYD+R +P +++S +GS+D+QMV I +RVL++P   QL  ++RTLG++Y+ERVLPSI++E  KAVVA+YNA++L+T+RE VS +IR  L +RA +F I LDDVSIT LTF +E+T A+EAKQVA QEAER                        SA L+G+AI  NPAFI LRKI+AAR+IA+ +S S  KVYL++D LLLN+   + E   KR
Sbjct:   27 GLVVYGAANSLYNVEGGHRAIVFNRVVGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSREIRKILTQRASQFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGEAIANNPAFITLRKIEAAREIAHTISNSANKVYLNSDDLLLNLQELNLEPSGKR 289          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: KYP68138.1 (Prohibitin-2, partial [Cajanus cajan])

HSP 1 Score: 281.6 bits (719), Expect = 3.000e-72
Identity = 144/263 (54.75%), Postives = 188/263 (71.48%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAKR 313
            G+  Y   NS Y VEGGHRA++FNR++GVK++VY EG HIMIPWFE PVIYD+R +P +++S +GS+D+QMV I +RVL++P   QL  ++RTLG++Y+ERVLPSI++E  KAVVA+YNA++L+T+RE VS +IR  L +RA +F I LDDVSIT LTF RE+T A+EAKQVA QEAER                        SA L+G+AI  NPAFI LRKI+AAR+IA  +S S  KVYL++D LLLN+   + E   KR
Sbjct:   39 GLAVYGAANSLYNVEGGHRAIVFNRVIGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASQFNIALDDVSITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREIAQTISNSANKVYLNSDDLLLNLQQLNLEPSGKR 301          
The following BLAST results are available for this feature:
BLAST of NO08G03490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002953694.17.300e-7455.81prohibitin [Volvox carteri f. nagariensis] >EFJ453... [more]
XP_020436513.12.100e-7357.54prohibitin [Heterostelium album PN500] >EFA84399.1... [more]
XP_024376787.12.800e-7356.27prohibitin-1, mitochondrial-like [Physcomitrella p... [more]
XP_002287026.12.800e-7357.77predicted protein, partial [Thalassiosira pseudona... [more]
XP_001701753.18.000e-7355.95prohibitin [Chlamydomonas reinhardtii] >PNW86476.1... [more]
KXZ47586.11.000e-7255.64hypothetical protein GPECTOR_34g745 [Gonium pector... [more]
PON44437.11.400e-7255.13Prohibitin [Parasponia andersonii][more]
XP_024379118.11.800e-7256.02prohibitin-1, mitochondrial-like [Physcomitrella p... [more]
NP_001241227.13.000e-7254.75uncharacterized protein LOC100811958 [Glycine max]... [more]
KYP68138.13.000e-7254.75Prohibitin-2, partial [Cajanus cajan][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008662NSK008662Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03490.1NO08G03490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583027gene_3683Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100018g43gene3717Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03490.1NO08G03490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03490 ID=NO08G03490|Name=NO08G03490|organism=Nannochloropsis oceanica|type=gene|length=1477bp
ATGAACGCGGCGAAGAAGTTCGCGGAGAACCTAGGCAGCAAGATTCCAAA
GGgtatgtgttatggatggggtggagtgagtggatggatgcatgctggct
gaggacaagactgaggaagggatgcggcctcatcgcttacaatgtatgct
atgcatcgcaaaatctcacttatacacaaccgacaattaaaaaacagGGG
CAGGCATGGGTGGGGGAGGTGGTGGCGGTGGTGGAAGTGGAGGACCGGCA
GGTATCAGTCCGGCGGGGCCGATTGGGGCTTTACTGGGGTTGGGAGTGGT
GGCGTACGCGGGCTACAACAGTTTTTACACTGTGGAGGGTGGGCACCGTG
CACTGTTGTTCAACAGACTACTGGGTGTGAAGGAGGAAGTTTATATTGAG
GGCATGCACATCATGATCCCTTGGTTTGAGATGCCCGTGATTTATGACAT
CAGACCTAAGCCGCGGATGATTCAGTCCTTGACGGGCAGCAAAGgtaagg
gaaggacatggggacagaagggaggccgagctagagagacgtaagaatga
gaccctctccgatatgtcatttgctttcgcgcttgaacaatgcttgaccc
ctccagtggttgatgacttttcctccaccccttcctccctccctccctac
ttccatcccttcagACATGCAAATGGTGAACATCACCATCCGTGTGCTCT
CCAAGCCTGACGCTTCCCAGCTCCGATGGATCTTTCGTACCCTTGGCAAG
GACTATGATGAGCGCGTCCTGCCTTCGATCGTCAACGAGGTGTCAAAGGC
AGTGGTTGCTAAGTACAATGCCGCCGAGCTGCTAACGAAGCGAGAGATGG
TCTCATCTCAAATTCGATTGCAGTTGGAAAAGCGGGCGAAAGAGTTCCGG
ATCGTGTTGGACGATGTATCTATCACGCACTTGACTTTCTCGAGGGAGTA
TACCAATGCCGTGGAGGCGAAGCAAGTCGgtacgtgggtgtgaaggaggg
agggagggaagcagatagggagtgagggaaaggacgttaggacgcccgtg
gccggctaccatttagttacgtgaaaatcactaactgctgctttttgctc
attcattctttcacctcaatgcatacctgtattcaatcaatcaccaatta
tccttctctcatccccttcttcctcccttccctccctccccctctacagC
GCAACAGGAGGCCGAACGCGCCAAGTATGTGGTGATGAAGGCGAACCAGG
AGAAGGAAGCTATCATCATTAAGGCCGAAGGTGAGGCTCAATCTGCAGCC
CTGGTCGGGAAGGCCATCCGTGAGAACCCTGCGTTTATCAAGCTCCGCAA
AATTGATGCGGCGAGGGACATTGCGAATGTAGTGTCGGCGTCCGGACAGA
AGGTGTACCTTTCGGCAGACTCATTGTTGTTGAACATGTACACCGGGGAT
GAGGAGAAGGGGGCTAAGAGGCGGTAG
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protein sequence of NO08G03490.1

>NO08G03490.1-protein ID=NO08G03490.1-protein|Name=NO08G03490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bp
MNAAKKFAENLGSKIPKGAGMGGGGGGGGGSGGPAGISPAGPIGALLGLG
VVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIY
DIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDER
VLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDD
VSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGE
AQSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLN
MYTGDEEKGAKRR*
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Synonyms
Publications