NO08G03460, NO08G03460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03460 vs. NCBI_GenBank
Match: ETL83377.1 (hypothetical protein L917_16667 [Phytophthora parasitica] >ETO65219.1 hypothetical protein F444_17447 [Phytophthora parasitica P1976] >ETP34422.1 hypothetical protein F442_17261 [Phytophthora parasitica P10297]) HSP 1 Score: 123.6 bits (309), Expect = 3.200e-24 Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = 0 Query: 14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 K+ +VGG AVGKTS +RR++ + Y PT+GV+V N + + LH WDVS E+ +SAS H+L+C ++ GIF V +V S+AA+D W+H L++Y+ P P L++HKADL+ + +D + AY RAAG W WTVG FG+ + K+ V +A++ +V+ I Sbjct: 74 KLALVGGPAVGKTSIVRRWLQRSYP-TTYSPTVGVEV-------------NTMTYKHRGQELLLHLWDVSSAEVDSSASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKETPCFLISHKADLLQKRVMTSDD--IAAYARAAGYKGWMWTVGKANFGE-----NEKNPAVREALERMVEFI 245
BLAST of NO08G03460 vs. NCBI_GenBank
Match: ETM36599.1 (hypothetical protein L914_16748 [Phytophthora parasitica]) HSP 1 Score: 123.6 bits (309), Expect = 3.200e-24 Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = 0 Query: 14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 K+ +VGG AVGKTS +RR++ + Y PT+GV+V N + + LH WDVS E+ +SAS H+L+C ++ GIF V +V S+AA+D W+H L++Y+ P P L++HKADL+ + +D + AY RAAG W WTVG FG+ + K+ V +A++ +V+ I Sbjct: 74 KLALVGGPAVGKTSIVRRWLQRSYP-TTYSPTVGVEV-------------NTMTYKHRGQELLLHLWDVSSAEVDSSASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKETPCFLISHKADLLQKRVMTSDD--IAAYARAAGYKGWMWTVGKANFGE-----NEKNPAVREALERMVEFI 245
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_008895872.1 (hypothetical protein PPTG_03850 [Phytophthora parasitica INRA-310] >ETN18167.1 hypothetical protein PPTG_03850 [Phytophthora parasitica INRA-310]) HSP 1 Score: 123.6 bits (309), Expect = 3.200e-24 Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = 0 Query: 14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 K+ +VGG AVGKTS +RR++ + Y PT+GV+V N + + LH WDVS E+ +SAS H+L+C ++ GIF V +V S+AA+D W+H L++Y+ P P L++HKADL+ + +D + AY RAAG W WTVG FG+ + K+ V +A++ +V+ I Sbjct: 74 KLALVGGPAVGKTSIVRRWLQRSYP-TTYSPTVGVEV-------------NTMTYKHRGQELLLHLWDVSSAEVDSSASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKETPCFLISHKADLLQKRVMTSDD--IAAYARAAGYKGWMWTVGKANFGE-----NEKNPAVREALERMVEFI 245
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_002903968.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55023.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 123.6 bits (309), Expect = 3.200e-24 Identity = 72/193 (37.31%), Postives = 110/193 (56.99%), Query Frame = 0 Query: 14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKEL-VASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 KI +VGG+AVGKTS +RR++ + Y PT+GV+V N + + L WDVS E+ V+++S H+L+C ++ GIF V +V S+AA+D W+H L++Y P P L++HKADL+ + +D + AY RAAG W WTVG FG+ + K+ PV +A++ +V+ I Sbjct: 57 KIALVGGSAVGKTSIVRRWLQRSYP-TTYSPTVGVEV-------------NTMAYKHRGQELLLQLWDVSSAEVDVSASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYFSPKETPCFLISHKADLLQKRVMTSDD--IAAYARAAGYKGWMWTVGKANFGE-----NEKNPPVREALERMVEFI 228
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_009827109.1 (hypothetical protein H257_04347 [Aphanomyces astaci] >ETV83679.1 hypothetical protein H257_04347 [Aphanomyces astaci]) HSP 1 Score: 120.6 bits (301), Expect = 2.700e-23 Identity = 74/197 (37.56%), Postives = 108/197 (54.82%), Query Frame = 0 Query: 10 EVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPV-HLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 E+ K+ +VGG VGK+S +RR++ +P Y PTIGVDV N + RP+ ++ WDVS E V S + H L+C + GIF V +V S+AAVDAW L ++V + +P LL+HKAD++ + +D ++AY R AG WCWTVG G+ S+KS V +A+ +V+ I Sbjct: 44 EIHLKVALVGGNGVGKSSIVRRWLKRPYQA-AYHPTIGVDV--------HTIKHNKRGSNAKERPITYVDVWDVSFVE-VDSPAFHELLCDGLDGIFFVFNVHRVSSIAAVDAWLTNLGKFVSSSEIPFYLLSHKADMLQKRVMTSDD--IDAYVRTAGFKGWCWTVGRGGLGE-----SDKSPAVLEALDTMVELI 223
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_009827112.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV83680.1 hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 120.6 bits (301), Expect = 2.700e-23 Identity = 74/197 (37.56%), Postives = 108/197 (54.82%), Query Frame = 0 Query: 10 EVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPV-HLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 E+ K+ +VGG VGK+S +RR++ +P Y PTIGVDV N + RP+ ++ WDVS E V S + H L+C + GIF V +V S+AAVDAW L ++V + +P LL+HKAD++ + +D ++AY R AG WCWTVG G+ S+KS V +A+ +V+ I Sbjct: 44 EIHLKVALVGGNGVGKSSIVRRWLKRPYQA-AYHPTIGVDV--------HTIKHNKRGSNAKERPITYVDVWDVSFVE-VDSPAFHELLCDGLDGIFFVFNVHRVSSIAAVDAWLTNLGKFVSSSEIPFYLLSHKADMLQKRVMTSDD--IDAYVRTAGFKGWCWTVGRGGLGE-----SDKSPAVLEALDTMVELI 223
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_009827110.1 (hypothetical protein, variant 2 [Aphanomyces astaci] >XP_009827111.1 hypothetical protein, variant 3 [Aphanomyces astaci] >ETV83681.1 hypothetical protein, variant 2 [Aphanomyces astaci] >ETV83682.1 hypothetical protein, variant 3 [Aphanomyces astaci]) HSP 1 Score: 120.6 bits (301), Expect = 2.700e-23 Identity = 74/197 (37.56%), Postives = 108/197 (54.82%), Query Frame = 0 Query: 10 EVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPV-HLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 E+ K+ +VGG VGK+S +RR++ +P Y PTIGVDV N + RP+ ++ WDVS E V S + H L+C + GIF V +V S+AAVDAW L ++V + +P LL+HKAD++ + +D ++AY R AG WCWTVG G+ S+KS V +A+ +V+ I Sbjct: 44 EIHLKVALVGGNGVGKSSIVRRWLKRPYQA-AYHPTIGVDV--------HTIKHNKRGSNAKERPITYVDVWDVSFVE-VDSPAFHELLCDGLDGIFFVFNVHRVSSIAAVDAWLTNLGKFVSSSEIPFYLLSHKADMLQKRVMTSDD--IDAYVRTAGFKGWCWTVGRGGLGE-----SDKSPAVLEALDTMVELI 223
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_012201941.1 (hypothetical protein SPRG_20327 [Saprolegnia parasitica CBS 223.65] >KDO27373.1 hypothetical protein SPRG_20327 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 119.8 bits (299), Expect = 4.700e-23 Identity = 77/204 (37.75%), Postives = 111/204 (54.41%), Query Frame = 0 Query: 4 LPPPCLEVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDV--IVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 +P E+ KI +VGG VGKTS +RR++ +P Y TIGVDV ++YP + +PV + WDVS E V + S H L+C ++ GIF V +V S+AAVDAW+ LA ++ + VP LL HKAD++ + +D +EAY R AG W WTVG G+ S+++ V +A+ +VD I Sbjct: 51 MPTIPAELELKIALVGGNGVGKTSIVRRWLKRPYQS-AYSQTIGVDVSTLLYPYGPTK-------------QPVKIQVWDVSSAE-VDNTSLHELVCDDLDGIFFVFNVHRVSSIAAVDAWRTQLASFISSSEVPFYLLCHKADMLQKRVMTSDD--IEAYARTAGYRGWSWTVGRMGLGE-----SDRNPAVIEALDKMVDAI 232
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_008614770.1 (hypothetical protein SDRG_10552 [Saprolegnia diclina VS20] >EQC31763.1 hypothetical protein SDRG_10552 [Saprolegnia diclina VS20]) HSP 1 Score: 118.6 bits (296), Expect = 1.000e-22 Identity = 75/198 (37.88%), Postives = 108/198 (54.55%), Query Frame = 0 Query: 10 EVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDV--IVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 E+ KI +VGG VGKTS +RR++ +P Y TIGVDV ++YP +PV + WDVS E V + S H L+C ++ GIF V +V S+AA+DAW+ LA ++ + VP LL HKAD++ + +D +EAY R AG W WTVG G+ S+++ V +A+ +VD I Sbjct: 47 ELELKIALVGGNGVGKTSIVRRWLKRPYQS-AYSQTIGVDVSTLLYPY-------------GPSKQPVKIQVWDVSSAE-VDNTSLHELLCDDLDGIFFVFNVHRVSSIAAIDAWRTQLAAFISSSEVPFYLLCHKADMLQKRVMTSDD--IEAYARTAGYRGWSWTVGRMGLGE-----SDRNPAVIEALDKMVDCI 222
BLAST of NO08G03460 vs. NCBI_GenBank
Match: OQR95295.1 (hypothetical protein THRCLA_07986 [Thraustotheca clavata]) HSP 1 Score: 116.7 bits (291), Expect = 4.000e-22 Identity = 78/221 (35.29%), Postives = 116/221 (52.49%), Query Frame = 0 Query: 6 PPCL--EVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHILLFRREGGGEEGERNGETS 224 PP + ++ KI +VGG VGK+S RR++ +P Y T+GVDV N+ + D +H+H WDVS E V S H L+C + GIF V +V S+ AVDAW+ LA+++ + VP LL HKAD++ + +D +EAY R AG W WTVG G+ S ++ V +A+ ++ +I L + ERNGE++ Sbjct: 40 PPTIPRDLELKIALVGGNGVGKSSIARRWLKRPYQS-AYHQTVGVDV-------------NMLEYPYDGSKIHVHIWDVSSAE-VESNGLHELLCDELDGIFFVFNVHRVSSIMAVDAWRSKLAQFISSSEVPCYLLCHKADMLQKRVMTSDD--IEAYVRTAGYRGWSWTVGRMGLGE-----SERNPAVMEALDKMIGYICL-EKPLKTLINERNGEST 237 The following BLAST results are available for this feature:
BLAST of NO08G03460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03460 ID=NO08G03460|Name=NO08G03460|organism=Nannochloropsis oceanica|type=gene|length=3140bpback to top protein sequence of NO08G03460.1 >NO08G03460.1-protein ID=NO08G03460.1-protein|Name=NO08G03460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=957bpback to top Synonyms
Publications
|