NO08G03280, NO08G03280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03280 vs. NCBI_GenBank
Match: XP_002286443.1 (adp-ribosylation factor [Thalassiosira pseudonana CCMP1335] >EED96084.1 adp-ribosylation factor [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 342.8 bits (878), Expect = 6.500e-91 Identity = 166/183 (90.71%), Postives = 175/183 (95.63%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLR--HRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MGLTFSR++ERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSND DR+DAARDE+HRMLNEDELRD++LLVFANKQDLP AM+AAEMTDKLGL LR +RQWYIQACCAT+GDGLYEGLDWLSA L KRK Sbjct: 1 MGLTFSRLFERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDSDRIDAARDEMHRMLNEDELRDAVLLVFANKQDLPNAMSAAEMTDKLGLHGLRPSYRQWYIQACCATTGDGLYEGLDWLSATLVKRK 183
BLAST of NO08G03280 vs. NCBI_GenBank
Match: CCI50104.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 340.9 bits (873), Expect = 2.500e-90 Identity = 161/181 (88.95%), Postives = 175/181 (96.69%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MG+ FSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDR++A RDELHRMLNEDELRDSILL+FANKQDLP AM+AAEMTDKLGL +LR+R+W+IQACCAT+GDGLYEGLDWLSA+L K K Sbjct: 1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIEATRDELHRMLNEDELRDSILLIFANKQDLPNAMSAAEMTDKLGLHALRNRKWFIQACCATTGDGLYEGLDWLSASLHKGK 181
BLAST of NO08G03280 vs. NCBI_GenBank
Match: OEU16527.1 (ARF/SAR superfamily [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 339.0 bits (868), Expect = 9.300e-90 Identity = 164/183 (89.62%), Postives = 174/183 (95.08%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLR--HRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MGLTFS+++E +FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSND DR+DAARDELHRMLNEDELRD++LLVFANKQDLP AM+AAEMTDKLGL LR +RQWYIQACCAT+GDGLYEGLDWLSA L KRK Sbjct: 1 MGLTFSKVFEGLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDSDRIDAARDELHRMLNEDELRDAVLLVFANKQDLPNAMSAAEMTDKLGLHGLRPSYRQWYIQACCATTGDGLYEGLDWLSATLVKRK 183
BLAST of NO08G03280 vs. NCBI_GenBank
Match: CCI50103.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 336.7 bits (862), Expect = 4.600e-89 Identity = 159/179 (88.83%), Postives = 173/179 (96.65%), Query Frame = 0 Query: 3 LTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 + FSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDR++A RDELHRMLNEDELRDSILL+FANKQDLP AM+AAEMTDKLGL +LR+R+W+IQACCAT+GDGLYEGLDWLSA+L K K Sbjct: 1 MAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIEATRDELHRMLNEDELRDSILLIFANKQDLPNAMSAAEMTDKLGLHALRNRKWFIQACCATTGDGLYEGLDWLSASLHKGK 179
BLAST of NO08G03280 vs. NCBI_GenBank
Match: OWZ15703.1 (ADP-ribosylation factor protein [Phytophthora megakarya]) HSP 1 Score: 335.5 bits (859), Expect = 1.000e-88 Identity = 159/172 (92.44%), Postives = 168/172 (97.67%), Query Frame = 0 Query: 3 LTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLS 175 + FSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDS+LLVFANKQDLP AM+AAEMTDKLGL LRHRQW+IQACCAT+GDGLYEGLDWL+ Sbjct: 1 MAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLT 172
BLAST of NO08G03280 vs. NCBI_GenBank
Match: XP_008896095.1 (ADP-ribosylation factor [Phytophthora parasitica INRA-310] >ETN18420.1 ADP-ribosylation factor [Phytophthora parasitica INRA-310]) HSP 1 Score: 333.6 bits (854), Expect = 3.900e-88 Identity = 167/215 (77.67%), Postives = 176/215 (81.86%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGL----------------------------------YEGLDWLSAALQKRK 182 MG+ FSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDS+LLVFANKQDLP AM+AAEMTDKLGL LRHRQW+IQACCAT+GDGL YEGLDWLSA LQK+K Sbjct: 1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLTAISYTIKLHDLRXXXXXXXXXXXXXXXXXXXXXYEGLDWLSATLQKQK 215
BLAST of NO08G03280 vs. NCBI_GenBank
Match: CEM00928.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 331.3 bits (848), Expect = 1.900e-87 Identity = 156/181 (86.19%), Postives = 170/181 (93.92%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKRK 182 MGL FSRIW+R+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDR++ AR+ELHRMLNEDELRD++LLVFANKQDLP AM AAE+TDKL L S+RHR W+IQ+ CAT+GDGLYEGLDWLS L ++K Sbjct: 1 MGLAFSRIWQRLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIEDAREELHRMLNEDELRDAVLLVFANKQDLPNAMTAAEVTDKLHLHSIRHRNWFIQSTCATTGDGLYEGLDWLSRTLAQKK 181
BLAST of NO08G03280 vs. NCBI_GenBank
Match: SAM08323.1 (hypothetical protein [Absidia glauca]) HSP 1 Score: 326.2 bits (835), Expect = 6.300e-86 Identity = 155/180 (86.11%), Postives = 171/180 (95.00%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKR 181 MGL+FS+++ +FGKKEMRILMVGLDAAGKTTILYKLKLGE+VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHY+QNT+G+IFVVDSNDRDRV ARDEL RMLNEDELRDS+LLVFANKQDLP AMNAAE+TDKLGL SLR+RQWYIQ+ CATSGDGLYEGL+WLSA L++R Sbjct: 1 MGLSFSKLFSDLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTEGIIFVVDSNDRDRVSEARDELQRMLNEDELRDSLLLVFANKQDLPNAMNAAEITDKLGLHSLRNRQWYIQSACATSGDGLYEGLEWLSANLKRR 180
BLAST of NO08G03280 vs. NCBI_GenBank
Match: SAM06413.1 (hypothetical protein [Absidia glauca]) HSP 1 Score: 325.9 bits (834), Expect = 8.200e-86 Identity = 155/180 (86.11%), Postives = 171/180 (95.00%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLSAALQKR 181 MGL+FS+++ +FGKKEMRILMVGLDAAGKTTILYKLKLGE+VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHY+QNT+G+IFVVDSNDRDRV ARDEL RMLNEDELRDS+LLVFANKQDLP AMNAAE+TDKLGL SLR+RQWYIQ+ CATSGDGLYEGL+WLSA L++R Sbjct: 1 MGLSFSKLFTDLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTEGIIFVVDSNDRDRVSEARDELQRMLNEDELRDSLLLVFANKQDLPNAMNAAEITDKLGLHSLRNRQWYIQSACATSGDGLYEGLEWLSANLKRR 180
BLAST of NO08G03280 vs. NCBI_GenBank
Match: XP_009394868.1 (PREDICTED: ADP-ribosylation factor 1 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 325.5 bits (833), Expect = 1.100e-85 Identity = 154/174 (88.51%), Postives = 166/174 (95.40%), Query Frame = 0 Query: 1 MGLTFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPQAMNAAEMTDKLGLSSLRHRQWYIQACCATSGDGLYEGLDWLS 175 MGLTF+R++ R+F KKEMRILMVGLDAAGKTTILYKLKLGE+VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHY+QNTQGLIFVVDSNDRDR+ ARDELHRMLNEDELRD++LLVFANKQDLP AMNAAE+TDKLGL SLRHR WYIQ+ CATSG+GLYEGLDWLS Sbjct: 1 MGLTFTRLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIIEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRHWYIQSACATSGEGLYEGLDWLS 174 The following BLAST results are available for this feature:
BLAST of NO08G03280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03280 ID=NO08G03280|Name=NO08G03280|organism=Nannochloropsis oceanica|type=gene|length=3326bpback to top protein sequence of NO08G03280.1 >NO08G03280.1-protein ID=NO08G03280.1-protein|Name=NO08G03280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=182bpback to top Synonyms
Publications
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