NO08G03230, NO08G03230 (gene) Nannochloropsis oceanica

Overview
NameNO08G03230
Unique NameNO08G03230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3716
Alignment locationchr8:886403..890118 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnusual protein kinase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:886403..890118 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0016301kinase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
IPR004147UbiB_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO08G03230 vs. NCBI_GenBank
Match: EWM26816.1 (unusual protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 1259.2 bits (3257), Expect = 0.000e+0
Identity = 783/1097 (71.38%), Postives = 890/1097 (81.13%), Query Frame = 0
Query:   10 RRRRRRPSTVARAMPLLFSLIILLDTINAFVVRPFG-APFTGASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPRGSFLGRFLLRTLGTLSAAIGLAVAPLPRQTVEDALADPEAALQQLQTMDVGATMRDGAGGLLRNWE-----------DGGYESTLSALSAKAGEFLASVQASLARAGEVDVGAVTELIKSGDMLQALNQATGIDASATNVALQAKGAEWLTAFDGRVEEAAQGLGDLLGGSGAGVLPPGLASQDVVRNVASFLKQAAINPTIRLQTEETLAAILVSGLGLTAAKALFFAKPSAGALMTGPPLVYDPALIDAYFGARPGKVLARLVSGLSASSGFLSGLLMDYVLGTKEENAEKRAIQVKNLITELGPVFIKVAQLISVRPDILXXXXXXXXXLLQDQVKPFSSAEATEIIASNLPKGTQLTDVYKDPAMAFKEPVAAASLGQVYKAELVDGTEVAVKVQRPNMLENITLDLYTVRLLCNIGKRVPKIAASCASFIEVLNNWGGRFQQEIDYVQEKENTRKFAEAMGACELVKDAIVVPEVFDSLSTRDVLVTTWIEGRKINSFNKDDPAENLQLQKILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIEADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGGGAKAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLDPSYSIVNQCFPFLARRLLTDDSPRVRAALKSFLYGSEQQLKVERVNDMIEGYRNFTNSFDEMAVTVGGAPLTSISASSFSSPSSSSSLAPLPNTREGLLTLASSAARREGGGKGYLEFDKPTMEVLQILFNKDGNFVQELVTDELVRMADAAIKEVTGLVARRAKSTPLAISNFIRRPTAGGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVVAVRPTLDDS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPANSAAFVENALGVSRQVLPEIAPGVAAIGRRFLSQLTGRILNRLADELDGPGNRL 1092
            RRRR+R STV      +  L +  + + AFV      +P   A+P                              KP GSF+GR L R LGT+   +GL+VAPLPR+ VE+ L++PEAA QQL  +DV ATMR+ A  L R  E              YEST+  L++KA  F + VQ S+   GEVD+ ++ EL+K+G+ ++A+ +ATG D  AT+ ALQ KGAEW  A DGRVEEAA GLGD+LGG+  GVLP GLA+QD+ R+VA FLKQAA+NP +R+QTEETLA +LV+GLGL+AA+ALF A+ S GA MTGPP VYDPALIDAYFGARP KVL RLVSGL+++S FLSGLL+DYV+ T EE A +RA Q+  LITELGPVFIKVAQLISVRPDI+          LQDQV+PFSS EA +IIA+NLPKGT L DVYK+P   F EPVAAASLGQVY+AELVDG  VAVKVQRPNMLE ITLDLYT+RLLCN+GK +P+  ASC SFIEVLNNWGGRFQQEIDYVQEK+NTRKFA+AMGA  LVKDA+VVPEV++++S+RDVLVT WIEGRKI SF+K DP +  +L+KILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEI+ADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGGGAKAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGL P+YSIVNQCFPFLARRLLTDDSPR+RAALKSFLYG+++QLKVERVNDMIEGYRNFTNSFD+MAVTVGG+P+     SS ++PS +++  P   +RE L+ L SS + +  GGKGYL+FDKPTMEVLQILF+KDGNFVQELVTDELVRMADA IKEVTGL ARRAK+TPLA+S+ +RR    GPL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LG V+V+  LD++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  G  ANS AF+E ALGVSRQVLPEIAPGVAAIGRRFL+QLTGR+LNRLADEL+G GNRL
Sbjct:   11 RRRRQRTSTVVTLRAFIPLLWLSAEMVMAFVGPSISVSPLARAAP-------------RRAVGMMATPPSNQAPRKPPGSFVGRILRRVLGTVGGVVGLSVAPLPREKVEEVLSNPEAAFQQLAEVDVSATMRETADDLRRTLESIDLSSPSGIASLDYESTMKMLASKASSFTSFVQESVDHIGEVDLASLMELVKAGNFIEAVTRATGADTVATSEALQGKGAEWFAALDGRVEEAANGLGDMLGGAN-GVLPEGLAAQDMTRSVAFFLKQAAVNPALRMQTEETLAGVLVAGLGLSAARALFDARSSLGAAMTGPPTVYDPALIDAYFGARPRKVLNRLVSGLTSASSFLSGLLVDYVMATGEEKASERAKQLTALITELGPVFIKVAQLISVRPDIVGPVYLKELQSLQDQVRPFSSREAKKIIAANLPKGTALKDVYKNPDTDFYEPVAAASLGQVYRAELVDGKVVAVKVQRPNMLETITLDLYTIRLLCNVGKTIPRFQASCTSFIEVLNNWGGRFQQEIDYVQEKKNTRKFAKAMGAFPLVKDAVVVPEVYETISSRDVLVTEWIEGRKIQSFDKSDPNDKEKLEKILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIDADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGGGAKAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLSPTYSIVNQCFPFLARRLLTDDSPRIRAALKSFLYGNDKQLKVERVNDMIEGYRNFTNSFDDMAVTVGGSPI----VSSSTAPSFAATSLP---SRERLMALGSSGSGK--GGKGYLDFDKPTMEVLQILFHKDGNFVQELVTDELVRMADAVIKEVTGLAARRAKTTPLALSSNLRR--LPGPLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGAVSVQAPLDETRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFGPSANSIAFIETALGVSRQVLPEIAPGVAAIGRRFLAQLTGRVLNRLADELEGQGNRL 1082          
BLAST of NO08G03230 vs. NCBI_GenBank
Match: CBN74481.1 (protein kinase:ABC1 family [Ectocarpus siliculosus])

HSP 1 Score: 490.7 bits (1262), Expect = 1.200e-134
Identity = 294/680 (43.24%), Postives = 393/680 (57.79%), Query Frame = 0
Query:  286 AAILVSGLGLTAAKALFFA-----KPSAGALMTGPPLVYDPALIDAYFGARPGKVLARLVSGLSASSGFLSGLLMDYVLGTK---EENAEKRAIQVKNLITELGPVFIKVAQLISVRPDILXXXXXXXXXLLQDQVKPFSSAEATEIIASNLPKGTQLTDVYKDPAMAFKEPVAAASLGQVYKAELVDGTEVAVKVQRPNMLENITLDLYTVRLLCNIGKRVPKIAASCASFIEVLNNWGGRFQQEIDYVQEKENTRKFAEAMGACELVKDAIVVPEVFDSLSTRDVLVTTWIEGRKINSFNKDDPAENLQLQKILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIEADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGGGAKAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLDPSYSIVNQCFPFLARRLLTDDSPRVRAALKSFLYGSE-QQLKVERVNDMIEGYRNFTNSFDE----MAVTVGGAPLTSIS----------------------------------------------ASSFSSPSSSSSLAPLPNTREGLLTLASSAARREGGGKGYLEF----DKPTMEVLQILFNKDGNFVQELVTDELVRMADAAIKE 903
            AA LV G G TA      A     K S  A     P  YD   I  Y+ +RP  +L+RL           + L +D  +G     E+N + RA +    +   GP FIK+ Q +S+RPDIL          LQD+V PF S +A  I+   L  G  L +++ D   AF+ PVAAASLGQVYKA LV G  VAVKVQRP++LE++TLDLY +RLL     +      S  S + V++NW  RF QE+DY+QE  N  +F   M   + + +AI+VP+V+ SL+TR +LVT W+EG K+++ +   PA   +L+KI+A +LNSYL QLL++G LHADPH GNFL TPDGRL +LD GL+TE+  D+R AL+EYV+HLTA+D+EAT+ DL+ LGFIP+EI  D +K GIVAP+L +VLEQLSNGGGAK+V V+ +G++VE L  QYP+ IP +FGLI+RAFSA+EGLGL LD  YSIVN+CFP+LARRLLT+DS R+   L++FLYG + + LKV+RV+D+++GY  FT   DE    +AV     PL   S                                                           A +P                  GG   +      D    + L++LF+K+GN+VQELV +ELVRM DA  +E
Sbjct:  196 AATLVIGAGATALGMSMAALSEEGKVSREAKNAPLPREYDLPAIMNYYNSRPLTLLSRLAEVSYRLGSLAAKLWLDRKVGDGSGWEKNMDSRATEFVEFVQGAGPAFIKIGQGVSIRPDILPEPYLKELSKLQDRVNPFDSGDARRILEQQL--GKPLREIFLDADTAFEIPVAAASLGQVYKATLVTGEVVAVKVQRPDVLESVTLDLYVIRLLLLFIAKNDSTRESALSILGVIDNWADRFLQELDYLQEAANGDRFRREMAESKTLGEAILVPQVYTSLNTRYILVTEWVEGVKVDAIDSSTPAGRERLKKIVATLLNSYLAQLLESGFLHADPHPGNFLCTPDGRLCVLDMGLMTEVGEDQRYALLEYVSHLTAKDYEATLYDLIVLGFIPEEIGQDPEKAGIVAPLLATVLEQLSNGGGAKSVTVETVGEEVEELGRQYPIRIPAYFGLIIRAFSALEGLGLQLDEQYSIVNECFPYLARRLLTEDSDRMHKMLRTFLYGKDGRYLKVDRVDDLVDGYSQFTALADEASKGLAVDGVKDPLGRTSHVPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVPAFAXXXXXXXXXXXXXXXGGAMAVGVDPIQDPVARDALKLLFSKEGNYVQELVVEELVRMTDALSRE 873          
BLAST of NO08G03230 vs. NCBI_GenBank
Match: CBJ31164.1 (ABC1-like [Ectocarpus siliculosus])

HSP 1 Score: 469.5 bits (1207), Expect = 2.700e-128
Identity = 278/675 (41.19%), Postives = 397/675 (58.81%), Query Frame = 0
Query:  290 VSGLGLTAAKALFFAKPSAGALMTGPPLVYDPALIDAYFGARPGKVLARLVSGLSASSGFLSGLLMDYVLGTKEENAEKRAIQVKNLITELGPVFIKVAQLISVRPDILXXXXXXXXXLLQDQVKPFSSAEATEIIASNL--PKGTQLTDVYKDPAMAFKEPVAAASLGQVYKAELV-DGTEVAVKVQRPNMLENITLDLYTVRLLCNIGKRVPKIAASCASFIEVLNNWGGRFQQEIDYVQEKENTRKFAEAMGACELVKDAIVVPEVFDSLSTRDVLVTTWIEGRKINSFNKDDPAENLQLQKILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIEADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGGGAKAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLDPSYSIVNQCFPFLARRLLTDDSPRVRAALKSFLYGSEQQ-LKVERVNDMIEGYRNFTNSFDEMAVTVGGAPLTS--------------ISASSFSSPSSSSSL---APLPNTREGLLTLASSAARREGGGKG----YLE--FDKPTMEVLQILFNKDGNFVQELVTDELVRMADAAIKEVTGLVARRAK------STPLAISNFIRRPTAGGPL 932
            +S LG  A  A+F  +   G      P  YD   +DAY+  +P  V  R V   ++ + FL  +L D +    ++N   RA+Q++   +  GP FIKV Q  S+RPDIL          LQD+V  FSS EA +I+   L  P G     V      +F  P+AAASLGQVYKA L   G  VAVK+QRP +L  +T DLY +R++ ++   V  +  +  S   ++++W  RF +E+DY  E  N  +FA+ M   + +  AI VP V+  ++TR VLVT W++G K ++     P     L  + A +LNSYLVQLLD G LHADPH GNFL+  DG L +LD GL+TE+  ++  AL+EYV HL A+D+ AT+ DL+ LGFI  E+ DD +K+ +V P+L  V+EQLS GGGA+ + +D +G++VE LA+ YP++IP +FGLI+R F  +EGLGL +DP YSIV +CFP+L RRLLT+D+PR+R  LKSFLYG +   L+V+RV++++EGYR FT    E++   GG+ + S               +  +FS  S S +L   APL   R        +A  R+GGG+G    Y++   D   M+ L++LF K+GN+VQ+LV +EL RM DA  +EV   V +  +        P+ +SN   RP+  G L
Sbjct:  130 LSLLGSAAVLAVFVQR--FGGESPPLPTEYDLDQLDAYYRRKPLVVAVRFVEVSASLASFLLNVLADVLTNNWDKNMAVRAVQMREFTSSNGPAFIKVGQGASIRPDILPAPYLEEMQKLQDRVPEFSSPEARKILERELGVPVGKAFESV-----ESFDRPIAAASLGQVYKARLKGTGETVAVKIQRPKVLATVTRDLYVIRIILDLIGTVSILRDASRSVKSLIDSWAVRFLEEMDYTMEANNADRFAKEMAKHKSLGSAIKVPSVYRDMTTRYVLVTQWVDGEKASNLEARSPEGRACLATLQATLLNSYLVQLLDNGFLHADPHPGNFLLQDDGTLCVLDFGLMTEVTEEQSYALLEYVIHLIAKDYPATLEDLIVLGFISPEVGDDPEKVALVVPLLAKVMEQLSEGGGAQTITIDTVGEEVEELAKNYPISIPAYFGLIIRCFGTLEGLGLSIDPGYSIVKECFPYLCRRLLTEDTPRMRRMLKSFLYGKDGDFLQVDRVDEILEGYRTFTALAAEVSAP-GGSGIMSRYGTEPTAAANGGVTTKEAFSPTSGSGTLGDYAPLQQQRRQGEGTGDAALARQGGGRGRGVPYIDPASDPVVMDALRLLFAKEGNYVQDLVVEELARMTDALGREVNLEVLQVLRRFADGVMEPIPLSNLSFRPSPDGHL 796          
BLAST of NO08G03230 vs. NCBI_GenBank
Match: CEM00531.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 454.9 bits (1169), Expect = 7.000e-124
Identity = 303/794 (38.16%), Postives = 442/794 (55.67%), Query Frame = 0
Query:  143 GAGGLLRNWEDGGYESTLSALSAKAGEFLASVQASLARAGEVDVGAVTELIKSGDML-QALNQATGIDASATNVALQAKGAEWLTAFDGRVEEAAQGLGDLLGGSGAGVLPPGLASQDVVR---NVASFLKQAAINPTIRLQTEETLAAI---LVSGLGLTAAKALFFAKPSAGALMTGPPLVYDPALIDAYFGARPGKVLARLVSGLSASSGFLSGLLMDYVLGTKEENAEKRAIQVKNLITELGPVFIKVAQLISVRPDILXXXXXXXXXLLQDQVKPFSSAEATEIIASNLPKG----TQLTDVYKDPAMAFKEPVAAASLGQVYKAELV-DGTEVAVKVQRPNMLENITLDLYTVRLLCNIGKR---VPK-IAASCASFIEVLNNWGGRFQQEIDYVQEKENTRKFAEAMGACELVKDAIVVPEVFDSLSTRDVLVTTWIEGRKIN--SFNKDD-PA----ENLQLQKILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIEADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGGGAKAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLDPSYSIVNQCFPFLARRLLTDDSPRVRAALKSFLYGSEQQLKVERVNDMIEGYRNFTNSFDEMAVTVGGAPLTSISASSFSSPSSSSSLAPLPNTREGLLTLASSAARREGGGKGYLEFDKPTMEVLQILFNKDGNFVQELVTDELVRMADAAIKEVTGLVARRAKS 914
            G    L+   +   +S   ALS+    + A V +++ +      G   +LIK+ + L Q +  +  +D S   +      + ++T  + ++ +    +   L    +G     LA+ D      +V     +A I   +    +   AA+   LV G     +    F K    A   GPP  Y+    + +F  R   V  R+   L    G    +  D      E N  KRA +++ LIT+LGP FIK+ Q +SVRPD+L          LQD+V PF + EA +++   L        Q  + Y +    F EPVAAASLGQVYKA+    G  VAVK+QRP++L   +LDL+ +R   ++G     +PK    SC SF +V++N G RF +E+DY++E  N R+F E + A  L+  +IVVP V    +++ VLVT WI+G+K+   S  +DD PA    + + L+K++  +LN YLVQLL+TG LHADPH GNFL T DGRL +LD GL+TEI+ D+R+AL+EYVAHL+A+D++  + DL+ LGFIP EI  D +K  IV P+L +VL QL+NGGGA  +NV+ +G  VE L++QYP++IP +FGLIVRAF  +EGLGLGLD  +SI+++C P+LA+RLLTDDSPRVR AL+SFLYG +  L  ERVN +++GY +FT    + +  +G            ++    +   P         TLA+  A          + D+ T E+L+IL   +GNFVQ+LV DE VR+ DA  +   G  AR  +S
Sbjct:   20 GVVAQLKTALESSVDSARGALSSLGDSWNALVSSAVPKMTGASGGGAVDLIKAEEALKQKIAASMDLDPSTVQI---DPSSPFITVRE-QLVDLLSNIPPELNIDTSGFRETTLATLDFYNWLWSVYPIPNKAEIKNALVFLAQADAAAVALDLVLGGIFVYSLTKGFGKGKLSA-DDGPPPRYNITDYERFFAQRRDVVTDRVTELLWRGGGLAWKIWRDTKGRDYETNEPKRAQELRELITDLGPAFIKIGQGVSVRPDLLSETYLRELQKLQDRVPPFGADEAKQVLLKELQAAGGSPDQTLEDYFEDVSVFDEPVAAASLGQVYKAKWKRTGKTVAVKIQRPDLLAKCSLDLFVIRKALSLGAAASFLPKRTRDSCRSFGKVIDNAGARFIEELDYMKEAANQRRFKEEVEANALLDGSIVVPGVVK--ASQFVLVTEWIDGQKLTDLSIKEDDTPATKADKEVVLEKVVKSLLNCYLVQLLETGWLHADPHPGNFLRTADGRLCVLDFGLMTEIKPDQRVALVEYVAHLSARDYDKALNDLITLGFIPPEIGADPEKRAIVVPLLSNVLGQLANGGGASGINVESVGRDVEELSKQYPISIPSYFGLIVRAFGTLEGLGLGLDKQFSILSECLPYLAKRLLTDDSPRVREALRSFLYGKQNYLDPERVNQILQGYTSFTLDVTDPSTFLGAGLSEEQQEQVLTATGQRARPPPGSPQARASETLANRLAA--------FQVDETTKELLEILLAPEGNFVQDLVLDEAVRLTDAVTRTTAGGAARAVRS 798          
BLAST of NO08G03230 vs. NCBI_GenBank
Match: XP_007512875.1 (predicted protein [Bathycoccus prasinos] >CCO16433.1 predicted protein [Bathycoccus prasinos])

HSP 1 Score: 425.6 bits (1093), Expect = 4.500e-115
Identity = 240/620 (38.71%), Postives = 358/620 (57.74%), Query Frame = 0
Query:  316 PLVYDPALIDAYFGARPGKVLARLVSGLSASSGFLSGLLMDYVLGTKEENAEKRAIQVKNLITELGPVFIKVAQLISVRPDILXXXXXXXXXLLQDQVKPFSSAEATEIIASNLPKGTQLTDVYKDPAMAFKEPVAAASLGQVYKAELVDGT-------------EVAVKVQRPNMLENITLDLYTVRLLCNIGKRVPK------IAASCASFIEVLNNWGGRFQQEIDYVQEKENTRKFAEAMGACELVKDAIVVPEVFDSLSTRDVLVTTWIEGRKINSFNKDDPAENLQL-QKILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIEADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQL-SNGGGA----------KAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLDPSYSIVNQCFPFLARRLLTDDSPRVRAALKSFLYGSEQQLKVERVNDMIEGYRNFTNSFD--EMAVTVGGAPLTSISASSFSSPSSSSSLAPLPNTREGLLTLASSAARREGGGKGYLEFDKPTMEVLQILFNKDGNFVQELVTDELVRMADAAIKE 903
            P  YD   I  Y+  RP  V+ R    L+    + + L+ D    T E+NA  RA  +K LI   G  F+KV Q +++RPD+L          L DQV+ F S +A ++I   + +  +L DV++D    F +PVAAAS+GQVYKA L  G               VAVKVQRP++LE +++DL+ +R   +I   +PK      +   C  FI VL+    RF +E+DY  E  N  +F + M +  +V+ AI VP VF  +S R V+   W+ G+K+     D+  ++L + +K++  +LNSY+VQ L+TG LHADPH GNF++  DGRLAILD+G++TEI  ++R+A +EY+AHL+A+++  T+ DLV LGFIP+ +AD ++   IV P+L  +LE L  +GGGA          ++  V E+ +++E+L+++YPL +PP+F LI+RAF  +EGLGL  D +Y+IV+QCFP++ARRLL+DDSPR+R ALKSF+YG   +L+V RV  +  G+  FTNS    EM  ++ GA                                                 D  T +V+++LFN++GN++QELV DE VR AD+  ++
Sbjct:  165 PKAYDSEKIAKYWARRPIAVMKRSAGLLTEVLTWATALVGDVTSNTVEQNAPIRAKALKELIARQGAAFVKVGQAVAIRPDLLPPAYLEEFQTLLDQVEAFPSEDARKLIQKTIGENVRLEDVFED-VSCFDKPVAAASIGQVYKATLKKGALKKSGEETEEYGRTVAVKVQRPDILEAVSIDLFVIRSFLDIFSSIPKTEQTFDLVNGCEGFIPVLDVAAERFLEELDYEIEGRNASRFEKDMNSISVVRGAIKVPHVFREISDRQVICQEWVVGQKLTEIAMDNSEKSLAVRKKLVETLLNSYMVQFLETGFLHADPHPGNFMLMEDGRLAILDYGMMTEIGEEQRIAFVEYIAHLSAKEYSKTLDDLVNLGFIPRALADSEENKNIVVPVLAEMLETLYGSGGGATTKIASLQEQQSSRVGELSNKLEALSKEYPLQLPPYFVLILRAFGTLEGLGLSTDENYAIVDQCFPYIARRLLSDDSPRMRKALKSFIYGGSDRLRVSRVRSISSGFSQFTNSMGTAEMNASMTGA-----------------------------------------------NIDPATKDVVRLLFNENGNYLQELVVDEAVRAADSLSRQ 736          
BLAST of NO08G03230 vs. NCBI_GenBank
Match: OUS48377.1 (ABC1 family-domain-containing protein [Ostreococcus tauri])

HSP 1 Score: 424.5 bits (1090), Expect = 1.000e-114
Identity = 247/651 (37.94%), Postives = 368/651 (56.53%), Query Frame = 0
Query:  282 EETLAAILVSGLGLTAAKALFFAKPSAGALMTGP------PLVYDPALIDAYFGARPGKVLARLVSGLSASSGFLSGLLMDYVLGTKEENAEKRAIQVKNLITELGPVFIKVAQLISVRPDILXXXXXXXXXLLQDQVKPFSSAEATEIIASNLPKGTQLTDVYKDPAMAFKEPVAAASLGQVYKAEL-----------VDGTEVAVKVQRPNMLENITLDLYTVRLLCNIGKRVPK------IAASCASFIEVLNNWGGRFQQEIDYVQEKENTRKFAEAMGACELVKDAIVVPEVFDSLSTRDVLVTTWIEGRKINSFNKDDPAENLQLQKILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIEADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGGGA-----------KAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLDPSYSIVNQCFPFLARRLLTDDSPRVRAALKSFLYGSEQQLKVERVNDMIEGYRNFTNSFDEMAVTVGGAPLTSISASSFSSPSSSSSLAPLPNTREGLLTLASSAARREGGGKGYLEFDKPTMEVLQILFNKDGNFVQELVTDELVRMADA 899
            ++T+   +   L L  A AL            GP      P  YD   I AY+  RP  +  R +S L   +G++S LL+D    + E+N+ +RA Q+K++I + GP F+KV Q +++RPD+L          L D VK FS+ EA  +I   L  G  L D+++D   AF +PVAAAS+GQVY+A+L             G EVAVKVQRP +L+ +TLDL  +R +     ++PK      I     SF+ VL+    RF +E+D+  E  N  +F   M +   V+ +I VP V+ S+STR VL   W+ GRK+   +++   E    +K++  +LN+Y+VQ L++G LHADPH GNFL+  DG+L ILD+G++T I  ++R+A +EY+AHL+A++++ T+ DLV LGF+P E+ADD     IV P+L   LE L   GG            ++  V E+ D++E+L ++YPL +PP+F LI+RAF  +EGLGL +D +Y+IV++CFP++ARRLL+DDSPR+R AL+SF+YG   +L+V RV D+  G+  FTNS                         ++ ++A    TR                       D  T + L I+FN+ GN++Q+LV +E VR ADA
Sbjct:   35 KKTITVEVYQALALGFAGALAMVNSGEEEARAGPASGDVLPTTYDVEKIRAYWSKRPLAIAKRSLSLLLDVAGWVSALLVDIQTKSVEKNSVERAGQLKDIIAKQGPAFVKVGQAVAIRPDLLPPAYLAELQTLLDGVKAFSNDEAKALIREQL--GKPLDDIFED-VSAFDKPVAAASIGQVYRAQLKRTKTMEAEQDTWGAEVAVKVQRPQILDVVTLDLLVIRTVLQYLAKLPKDGPLGQIQQGAESFLPVLDVAAERFLEELDFGMEASNASRFEADMNSVAFVRGSIKVPHVYRSVSTRKVLTQEWVTGRKLTEIDENTSKET--REKLVETLLNAYMVQFLESGFLHADPHPGNFLLQDDGKLCILDYGMMTTISEEQRIAFVEYIAHLSAKEYDKTLADLVNLGFVPPELADDPINRSIVVPVLAETLETLYGSGGGITTKTDALNAQQSSRVGELSDKLEALGKEYPLQLPPYFVLILRAFGTLEGLGLSVDSNYAIVDECFPYIARRLLSDDSPRMRDALRSFVYGGSDRLRVSRVKDIAGGFSRFTNSM-----------------------GATEAVATTDPTR----------------------LDPATKDALAIIFNEKGNYLQDLVVEEAVRAADA 635          
BLAST of NO08G03230 vs. NCBI_GenBank
Match: XP_022839256.1 (Importin-beta, N-terminal domain [Ostreococcus tauri] >CEF98426.1 Importin-beta, N-terminal domain [Ostreococcus tauri])

HSP 1 Score: 424.1 bits (1089), Expect = 1.300e-114
Identity = 254/681 (37.30%), Postives = 379/681 (55.65%), Query Frame = 0
Query:  282 EETLAAILVSGLGLTAAKALFFAKPSAGALMTGP------PLVYDPALIDAYFGARPGKVLARLVSGLSASSGFLSGLLMDYVLGTKEENAEKRAIQVKNLITELGPVFIKVAQLISVRPDILXXXXXXXXXLLQDQVKPFSSAEATEIIASNLPKGTQLTDVYKDPAMAFKEPVAAASLGQVYKAEL-----------VDGTEVAVKVQRPNMLENITLDLYTVRLLCNIGKRVPK------IAASCASFIEVLNNWGGRFQQEIDYVQEKENTRKFAEAMGACELVKDAIVVPEVFDSLSTRDVLVTTWIEGRKINSFNKDDPAENLQLQKILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIEADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGGGA-----------KAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLDPSYSIVNQCFPFLARRLLTDDSPRVRAALKSFLYGSEQQLKVERVNDMIEGYRNFTNSFDEMAVTVGGAPLTSISASSFSSPSSSSSLAPLPNTREGLLTLASSAARREGGGKGYLEFDKPTMEVLQILFNKDGNFVQELVTDELVRMADAAIK-------EVTGL---VARRAKSTPLAI 919
            ++T+   +   L L  A AL            GP      P  YD   I AY+  RP  +  R +S L   +G++S LL+D    + E+N+ +RA Q+K++I + GP F+KV Q +++RPD+L          L D VK FS+ EA  +I   L  G  L D+++D   AF +PVAAAS+GQVY+A+L             G EVAVKVQRP +L+ +TLDL  +R +     ++PK      I      F+ VL+    RF +E+D+  E  N  +F   M +   V+ +I VP V+ S+STR VL   W+ GRK+   +++   E    +K++  +LN+Y+VQ L++G LHADPH GNFL+  DG+L ILD+G++T I  ++R+A +EY+AHL+A++++ T+ DLV LGF+P E+ADD     IV P+L   LE L   GG            ++  V E+ D++E+L ++YPL +PP+F LI+RAF  +EGLGL +D +Y+IV++CFP++ARRLL+DDSPR+R AL+SF+YG   +L+V RV D+  G+  FTNS                         ++ ++A    TR                       D  T + L I+FN+ GN++Q+LV +E VR ADA  +       +V G    +A  A  TPLA+
Sbjct:  113 KDTITVEVYQALALGFAGALAMVNSGEEEARAGPASGDVLPTTYDVEKIRAYWSKRPLAIAKRSLSLLLDVAGWVSALLVDIQTKSVEKNSVERAGQLKDIIAKQGPAFVKVGQAVAIRPDLLPPAYLAELQTLLDGVKAFSNDEAKALIREQL--GKPLDDIFED-VSAFDKPVAAASIGQVYRAQLKRTKMMEAEQDTWGAEVAVKVQRPQILDVVTLDLLVIRTVLQYLAKLPKDGPLGQIQQGAEGFLPVLDVAAERFLEELDFGMEASNASRFEADMNSVAFVRGSIKVPHVYRSVSTRKVLTQEWVTGRKLTEIDENTSKET--REKLVETLLNAYMVQFLESGFLHADPHPGNFLLQDDGKLCILDYGMMTTISEEQRIAFVEYIAHLSAKEYDKTLADLVNLGFVPPELADDPINRSIVVPVLAETLETLYGSGGGITTKTDALNAQQSSRVGELSDKLEALGKEYPLQLPPYFVLILRAFGTLEGLGLSVDSNYAIVDECFPYIARRLLSDDSPRMRDALRSFVYGGSDRLRVSRVKDIAGGFSRFTNSM-----------------------GATEAVATTDPTR----------------------LDPATKDALAIIFNEKGNYLQDLVVEEAVRAADAVSRSGAATAWQVLGQAWPLAAAASVTPLAL 743          
BLAST of NO08G03230 vs. NCBI_GenBank
Match: KXZ44555.1 (hypothetical protein GPECTOR_65g173 [Gonium pectorale])

HSP 1 Score: 416.8 bits (1070), Expect = 2.100e-112
Identity = 241/620 (38.87%), Postives = 363/620 (58.55%), Query Frame = 0
Query:  316 PLVYDPALIDAYFGARPGKVLARLVSGLSASSGFLSGLLMDYVLGTKEENAEKRAIQVKNLITELGPVFIKVAQLISVRPDILXXXXXXXXXLLQDQVKPFSSAEATEIIASNLPKGTQLTDVYKDPAMAFKEPVAAASLGQVYKAEL---VDGTEVAVKVQRPNMLENITLDLYTVRLLCNIGKRVPKIAASCASFIEVLNNWGGRFQQEIDYVQEKENTRKFAEAMGACELVKDAIVVPEVFDSLSTRDVLVTTWIEGRKINSFNKDDPAENLQLQKILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIEADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGGGAKAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLDPSYSIVNQCFPFLARRLLTDDSPRVRAALKSFLYGSEQQLKVERVNDMIEGYRNFTNSFDEMAVTVGGAPLTSISASSFSSPSSSSSLAPLPNTREGLLTLASSAARREG-GGKGYLEFDKPTMEVLQILFNKDGNFVQELVTDELVRMADAAIKEVTGLVARRAKSTPLAISNFIRRPTAGGPL 932
            PL YDP  +DAYF  RP +VL R     S   GF   +L+D+ LG  E + E RA +   +I +LGP +IK+AQ +S R D++          LQD V+ FS+ EA E++ S L  G  +  V++       EP+AAASLGQVY+ +L     G EVAVKVQRP +LE + LD+Y +R    +   +P ++   A    VL++W  RF +E+DY  E +NT  F + M + + +  A V PE    L+TR V+VT W+EG K+N    +D      ++ + + +LN YL+QLL+TG+LHADPH GN L T DG++ ILD GL+TE+  D+R+ALIE++AHLT +DW     DL  LGF+P  + D+ + L  +AP+L +V+ Q+  GGG +  N+  +  Q++ +A  Y + IPP+FGL++RAF  IEG+ L  D +Y+IV +C P+L+RRLLTD++PR+RAAL+  LYG + ++ VER++ +I  + +FT                          +S+++ A  P   E      +   + +G GG      ++ T EVL+++F KDG++ QEL+ +E+V   DA  +E  G   R   S+  A++  +R   A GPL
Sbjct:  212 PLRYDPKGLDAYFAKRPMQVLKRNAEVFSQIGGFAVAVLVDWRLGRFESSMESRAKEAGRIIEDLGPAYIKIAQQLSTRVDLVPPPYLEEFKRLQDNVRTFSTIEAREVLESGL--GCSVDRVFE---WLSAEPLAAASLGQVYRGKLRQEYGGGEVAVKVQRPAVLETVALDIYIMRRAAILVSSLPGMSDQWA---VVLDDWATRFFEEMDYQLEAQNTMAFKQQMASLQGISVATVYPE----LTTRKVIVTEWVEGEKLNHSKAED------VRALCSTLLNCYLIQLLETGLLHADPHPGNLLRTADGKIVILDFGLMTEVTEDQRVALIEFIAHLTMEDWNGVAKDLSALGFMPDGMPDNAEAL--IAPVLETVMGQIVRGGGLRGFNIGSMTSQLQGVAMSYKMCIPPYFGLVLRAFCVIEGIALKTDENYAIVQECLPYLSRRLLTDNNPRMRAALRQLLYGKKNRIDVERLSKLISAFGSFTT-------------------------NSATAQAAGPTFGEAAERAYAERVKGQGHGGDDGPVVNEATREVLKVVFAKDGSYAQELIVEEMVAAVDAMSREALGEALRLVLSSAGAVTT-LRSVEALGPL 785          
BLAST of NO08G03230 vs. NCBI_GenBank
Match: XP_002499783.1 (predicted protein, partial [Micromonas commoda] >ACO61041.1 predicted protein, partial [Micromonas commoda])

HSP 1 Score: 410.6 bits (1054), Expect = 1.500e-110
Identity = 236/536 (44.03%), Postives = 319/536 (59.51%), Query Frame = 0
Query:  286 AAILVSGLGLTAAKALFFAKPSA-----GALMTGPPLVYDPALIDAYFGARP---GKVLARLVSGLSASSGFLSGLLMDYVLGTKEENAEKRAIQVKNLITELGPVFIKVAQLISVRPDILXXXXXXXXXLLQDQVKPFSSAEATEIIASNLPKGTQLTDVYKDPAMAFKEPVAAASLGQVYKAEL------VDGTE-------VAVKVQRPNMLENITLDLYTVRLLCNIGKRVP--------KIAASCASFIEVLNNWGGRFQQEIDYVQEKENTRKFAEAMGACELVKDAIVVPEVFDSLSTRDVLVTTWIEGRKINSFNKDDPAENLQLQKILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIEADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGGGAKAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLDPSYSIVNQCFPFLARRLLTDDSPRVRAALKSFLYGSEQQLKVERV 793
            AA +V+G  L  A+    +         G    G P VYD   I  Y+  RP   GK    LV+ LS    +   +L D   G  E N+ KRA  +++LI+E GP F+KV Q I++RPD+L          L DQV PF S EA   I ++L  G  L DV++D A AF +PVAAAS+GQVYKA L      VD +E       VAVKVQRP++L  +TLDL  +R L     R+P        ++  +   FI VL+    RF +E+DY  E  N  +F   M   E+V+ A+ VP VF  LS R VL   W+ GRK+      DPA      K++  +LNSY+VQ LDTG LHADPH GNF++ PDGRL ILD+G++TEI  D+R+A IEY+AHL+A++++ T+ DLV LGF+P  +ADD     IV   L +            A  V E+ D++E+LA+ YPL +PP+F LI+RAF  +EGLGL +D +Y+IV++CFP++ARR+L DDSPR+RAAL+SF+YG   +LKV RV
Sbjct:   25 AAAIVAGASLAIARVAGVSGDDKSTHYDGETYDGLPTVYDIPAIREYWSERPLAAGKRAGGLVAKLSQ---WALSVLSDVATGNVETNSRKRAAAMRDLISEQGPAFVKVGQAIAIRPDLLPQAYLDELQKLLDQVAPFGSDEARATIEASLGDGVTLDDVFEDAATAFAQPVAAASIGQVYKATLRLDAPGVDQSESNAWGRVVAVKVQRPDILSVVTLDLLVIRSLLEAAARIPTGNNALLEQVVQTAEGFIPVLDVAAERFMEELDYGLEANNASRFEADMARTEVVRGAVKVPHVFRGLSGRCVLTQEWVTGRKLTEITA-DPASGPVRAKLVQTLLNSYMVQFLDTGFLHADPHPGNFMLMPDGRLCILDYGMMTEISQDQRIAFIEYIAHLSAREYDKTLGDLVNLGFVPASLADDPANRAIVTDALNA----------QSASRVGELSDKLEALAKDYPLQLPPYFVLILRAFGTLEGLGLSVDENYAIVDECFPYVARRMLADDSPRMRAALRSFVYGGGDRLKVSRV 546          
BLAST of NO08G03230 vs. NCBI_GenBank
Match: OAE25578.1 (hypothetical protein AXG93_3444s1130 [Marchantia polymorpha subsp. ruderalis] >PTQ45991.1 hypothetical protein MARPO_0013s0185 [Marchantia polymorpha])

HSP 1 Score: 408.7 bits (1049), Expect = 5.800e-110
Identity = 241/625 (38.56%), Postives = 352/625 (56.32%), Query Frame = 0
Query:  293 LGLTAAKALFFAKPSAGALMTGP--PLVYDPALIDAYFGARPGKVLARLVSGLSASSGFLSGLLMDYVLGTKEENAEKRAIQVKNLITELGPVFIKVAQLISVRPDILXXXXXXXXXLLQDQVKPFSSAEATEIIASNLPKGTQLTDVYKDPAMAFKEPVAAASLGQVYKAELVD-GTEVAVKVQRPNMLENITLDLYTVRLLCNIGKRVPKIAASCASFIEVLNNWGGRFQQEIDYVQEKENTRKFAEAMGACELVKDAIVVPEVFDSLSTRDVLVTTWIEGRKINSFNKDDPAENLQLQKILAVMLNSYLVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIEADRRLALIEYVAHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGGGAKAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLDPSYSIVNQCFPFLARRLLTDDSPRVRAALKSFLYGSEQQLKVERVNDMIEGYRNFTNSFDEMAVTVGGAPLTSISASSFSSPSSSSSLAPLPNTREGLLTLASSAARREGGGKGYLEFDKPTMEVLQILFNKDGNFVQELVTDELVRMADAAIKEVTGLVARRAKST 915
            + L  A +L  +  +  A + G   PL YDP  I  +F  RP  VL R V  ++  S     +++D  L    EN + RA Q+ +LI  LGP  IK+ Q +S+RPD+L          LQD+V PF + +A ++I+  L + T+  +V+ + + A   P+AAASLGQVYKA L + G  VAVKVQRP +LE I++DL  +R      +  P +    +  + +L+ W  RF  E+DYVQE +N  +FAE M +       + VP V+   +TR VL T W+EG K++    DD      L  +++  LN YL+QLL+TG LHADPH GN L TPDGRL +LD GL+T++  D+R +LIEY++HL   D+     DLVRLGF+P ++ +D  K   V P L  VL QL  GGGA+ +N+ E+ D +  ++++Y   +PP+F LI+RAFS +EG+GL  DP Y+IV++C+P++++RLLTDDSPR RAALK FLYG ++QL V RV +++ G++    SF E+    G              P  + S                               D  T E L+++F  +G+++QEL+  EL R  DA  +E    + R   ST
Sbjct:  218 VALVTAVSLVSSTSNKRAFIEGEDIPLRYDPRSIATFFKKRPADVLVRSVQIMTQCSSLSISIILDLTLNRYSENEKLRARQLVDLIARLGPTAIKIGQALSIRPDLLSAVYLEELQKLQDRVPPFPNDDARKLISQGLGRPTE--EVFSEMSEA---PIAAASLGQVYKARLRETGKMVAVKVQRPGVLEGISMDLLLLRAGAYAFQNFPGVQ---SDLVGLLDTWAVRFYDELDYVQEAKNQTQFAENMRSL----SNVTVPGVYTEYTTRKVLTTEWVEGEKLSESKSDD------LLPLVSTALNCYLMQLLETGFLHADPHPGNLLRTPDGRLCVLDFGLMTQVTEDQRYSLIEYISHLVNSDYARVAEDLVRLGFVPPDM-EDPAKTAAVVPQLSKVLGQLVQGGGARKINIQEVTDDLVKMSKEYVFVLPPYFALILRAFSVLEGIGLEADPDYTIVDECYPYISKRLLTDDSPRARAALKYFLYGGKKQLDVGRVEEIVGGFQ----SFREVMAPAG--------------PKQTQS-----------------------------SIDPSTKEALKLIFAPEGSYIQELLLTELARSVDALSREALAELWRLIGST 776          
The following BLAST results are available for this feature:
BLAST of NO08G03230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26816.10.000e+071.38unusual protein kinase [Nannochloropsis gaditana][more]
CBN74481.11.200e-13443.24protein kinase:ABC1 family [Ectocarpus siliculosus... [more]
CBJ31164.12.700e-12841.19ABC1-like [Ectocarpus siliculosus][more]
CEM00531.17.000e-12438.16unnamed protein product [Vitrella brassicaformis C... [more]
XP_007512875.14.500e-11538.71predicted protein [Bathycoccus prasinos] >CCO16433... [more]
OUS48377.11.000e-11437.94ABC1 family-domain-containing protein [Ostreococcu... [more]
XP_022839256.11.300e-11437.30Importin-beta, N-terminal domain [Ostreococcus tau... [more]
KXZ44555.12.100e-11238.87hypothetical protein GPECTOR_65g173 [Gonium pector... [more]
XP_002499783.11.500e-11044.03predicted protein, partial [Micromonas commoda] >A... [more]
OAE25578.15.800e-11038.56hypothetical protein AXG93_3444s1130 [Marchantia p... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008702NSK008702Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03230.1NO08G03230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582910gene_3653Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100018g5gene3749Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03230.1NO08G03230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03230 ID=NO08G03230|Name=NO08G03230|organism=Nannochloropsis oceanica|type=gene|length=3716bp
ATGGCAGCACAAGCCACGTTCTGCCCGCGTCGGCGGAGGCGACGGCCCAG
CACCGTAGCCCGTGCAATGCCACTCCTGTTTTCTTTAATCATACTGTTGG
ATACGATCAATGCCTTTGTGGTGCGGCCATTTGGAGCACCCTTCACAGGC
GCCTCTCCACCACTCGCCTCAAGGAGTGCCGCTGCCACCACCCCAACCTC
CAGCACTGTGATGATGGTCACAAACAACAAGGCCAGTAGCACATCCCGCA
AACCTCGTGGGAGCTTCCTAGGCCGCTTCTTGTTGCGGACTCTCGGTACA
TTAAGTGCCGCCATTGGTTTGGCGGTGGCCCCACTGCCGCGGCAAACGGT
GGAGGATGCGCTGGCGGACCCCGAGGCAGCCTTGCAGCAGCTTCAGACCA
TGGATGTTGGGGCGACCATGCGTGACGGAGCAGGGGGGCTCTTGCGGAAT
TGGGAGGATGGGGGTTATGAATCGACTTTAAGCGCGCTGTCCGCCAAAGC
CGGTGAGTTCTTGGCCTCTGTGCAAGCGTCCTTGGCACGTGCAGGGGAGG
TGGACGTGGGTGCCGTGACGGAGCTGATCAAGTCCGGGGACATGTTACAG
GCCTTGAATCAGGCGACAGGGATTGATGCCTCGGCAACGAACGTTGCGCT
GCAAGCGAAGGGCGCTGAGTGGCTAACCGCGTTCGACGGTCGGGTGGAGG
AGGCAGCGCAGGGACTAGGGGACTTGTTGGGGGGAAGCGGTGCAGGGGTG
TTGCCCCCTGGGTTGGCGTCGCAGGATGTTGTGCGAAACGTTGCATCATT
TTTAAAGCAGGCAGCGATTAATCCCACGATTCGGTTGCAGACGGAGGAGA
CACTGGCCGCCATACTCGTGTCGGGCTTGGGGTTGACAGCTGCCAAGGCA
TTGTTTTTCGCTAAGCCGAGCGCGGGGGCCTTGATGACGGGCCCTCCTCT
TGTGTATGACCCTGCGTTAATTGACGCGTATTTTGGGGCGCGCCCGGGGA
AGGTCCTGGCGAGGCTCGTTAGTGGGTTGAGTGCGAGCAGTGGCTTTTTG
TCGGGCCTGTTGATGGATTATGTCCTTGGAACCAAGGAGGAGAACGCTGA
AAAGAGGGCTATTCAAGTAAAAAATCTCATCACAGAGCTGGGGCCTGTGT
TCATTAAAGTCGCACAGCTCATTTCTGTCAGACCCGATATCCTTGGCCCT
GTCTATCTGAAGCAGCTGCAGCTACTGCAAGATCAAGTGAAGCCGTTTTC
TTCCGCCGAGGCCACGGAGATAATTGCGTCCAACCTTCCGAAAGGCACCC
AGCTCACCGACGTGTACAAAGACCCAGCTATGGCTTTCAAGGAGCCAGTG
GCTGCAGCAAGCTTAGGGCAGGTGTATAAGGCCGAGCTGGTGGACGGGAC
TGAAGTTGCGGTCAAGGTACAGCGGCCGAATATGCTGGAGAACATTACCC
TGGATCTGTACACCGTTCGATTGTTATGCAACATTGGCAAGAGAGTTCCC
AAGATCGCGGCAAGCTGCGCCAGCTTTATTGAAGTGTTGAATAACTGGGG
CGGGCGGTTCCAGCAGGAGATTGATTACGTGCAAGAGAAGGAAAATACCC
GGAAGTTTGCTGAGGCCATGGGGGCGTGTGAGCTTGTCAAGGACGCGATC
GTCGTCCCGGAGGTTTTCGATTCCCTGTCCACTCGCGATGTGTTAGTGAC
GACGTGGATTGAGGGGCGGAAGATCAATTCTTTCAATAAGGATGATCCGG
CGGAGAATCTGCAGCTGCAGAAGATCCTGGCGGTCATGCTGAACTCGTAC
CTGGTGCAGTTGCTGGATACGGGAATCCTGCACGCGgtaggttttggaag
gggcctttatatatgtccatttattttcttcgcgtgagactctcgtacgc
acctctttgtttctgttatcactcccacttaccctctttcccggaacaca
gGATCCGCATGCAGGCAATTTTCTCGTTACCCCGGATGGGCGCCTCGCCA
TCTTGGACCACGGCCTTGTGACGGAGATTGAAGCAGACCGACGCTTGGCG
CTGATTGAGTATGTGGCGCACTTGACGGCGCAAGACTGGGAGgtgagttt
gtttgtgccgagccatttgttctcttttctttcagtccccatcccccccg
ctccccttcctatttctcttcctcccttatctcaactccccattgggttt
tcttgcgagagctagatggcatgctggcgctgcatcttagcctattacat
accttcctccctctctttgtctctcccccgtagGCGACTGTCTGCGACCT
GGTCCGGCTCGGCTTTATCCCTCAAGAAATTGCCGATGACAAAAAGAAAC
TCGGCATCGTTGCACCTATCCTCGGGTCAGTTCTGGAGCAGTTGAGCAAT
GGCGGAGGGGCCAAAGCCGTCAATGTGGATGAGATTGGCGATCAGGTGGA
GAGTCTTGCAGAGCAATACCCCTTGACGATCCCGCCTTGGTTTGGCTTAA
TCGTGCGAGCTTTCTCGGCTATTGgtatatattgattatgtggggacgag
gtgaaagagggaagatgaggtcttatttttacgagtacaaaccaattttt
actcacatcctctctaccgcctcccttcccccaccgtgtccattcccctc
atgcacagAGGGTCTCGGTCTAGGGCTCGATCCCAGCTACTCCATCGTCA
ACCAATGCTTCCCTTTCCTCGCCCGGCGCTTGCTCACCGACGACTCTCCC
CGGGTGCGAGCGGCGCTCAAATCCTTCCTTTACGGCAGCGAGCAGCAGCT
GAAGGTCGAAAGGGTGAATGACATGATCGAAGGCTACAGAAACTTTACTA
ATTCTTTTGACGAAATGGCAGTGACGGTGGGTGGGGCTCCTTTGACTTCG
ATCTCTGCCTCCTCTTTCTCTTCTCCCTCCTCCTCGTCGTCCTTGGCGCC
CTTACCCAACACCAGAGAGGGCCTTTTAACTCTGGCCAGCAGCGCGGCTC
GTCGAGAAGGTGGAGGGAAAGGTTACTTAGAGTTTGACAAGCCGACGATG
GAGGTGTTGCAAATTCTGTTCAACAAAGACGGGAATTTTGTGCAAGAACT
CGTGACCGACGAGCTCGTGCGGATGGCAGATGCGGCTATCAAGGAAGTCA
CTGGCTTGGTGGCTCGCCGCGCCAAGAGCACTCCATTGGCGATATCTAAT
TTTATTCGTCGACCGACAGCTGGTGGCCCCTTGGGGACTTTGGCGCTGCT
TCCCTTTTTTCCTTTGATGACGTTGTTAGGCATACTTACGGCCTTGGCCG
AACGGGCCGAGACCTTGTCGCAGTTGACAGAGGAGGATCGAGAGAGCCTT
AAGACCCTGCGGCTTCTCCTGGGGGTGGTAGCAGTGCGACCCACCTTGGA
TGACAGCAACAGTAGCAGCAGCAATAATAGCCCTTTCCCATTCCCCTTTC
CCCCTCTCCCGCCTTTTTTCTTCCCCCGTCCCGGCCGCAGCAGTAGCAGC
GGTACATTTCCATTCCCCTTTCCCCTGCCTCCTCCTTTCGGCTCTCCTGC
CAACAGCGCGGCGTTTGTGGAGAATGCGTTGGGAGTGTCAAGACAAGTGC
TGCCTGAGATAGCTCCGGGGGTTGCAGCGATAGGGAGGAGATTCTTGAGC
CAGCTAACGGGGAGGATCTTGAATCGTCTGGCTGATGAGTTGGACGGACC
GGGGAACAGGTTGTAG
back to top

protein sequence of NO08G03230.1

>NO08G03230.1-protein ID=NO08G03230.1-protein|Name=NO08G03230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1092bp
MAAQATFCPRRRRRRPSTVARAMPLLFSLIILLDTINAFVVRPFGAPFTG
ASPPLASRSAAATTPTSSTVMMVTNNKASSTSRKPRGSFLGRFLLRTLGT
LSAAIGLAVAPLPRQTVEDALADPEAALQQLQTMDVGATMRDGAGGLLRN
WEDGGYESTLSALSAKAGEFLASVQASLARAGEVDVGAVTELIKSGDMLQ
ALNQATGIDASATNVALQAKGAEWLTAFDGRVEEAAQGLGDLLGGSGAGV
LPPGLASQDVVRNVASFLKQAAINPTIRLQTEETLAAILVSGLGLTAAKA
LFFAKPSAGALMTGPPLVYDPALIDAYFGARPGKVLARLVSGLSASSGFL
SGLLMDYVLGTKEENAEKRAIQVKNLITELGPVFIKVAQLISVRPDILGP
VYLKQLQLLQDQVKPFSSAEATEIIASNLPKGTQLTDVYKDPAMAFKEPV
AAASLGQVYKAELVDGTEVAVKVQRPNMLENITLDLYTVRLLCNIGKRVP
KIAASCASFIEVLNNWGGRFQQEIDYVQEKENTRKFAEAMGACELVKDAI
VVPEVFDSLSTRDVLVTTWIEGRKINSFNKDDPAENLQLQKILAVMLNSY
LVQLLDTGILHADPHAGNFLVTPDGRLAILDHGLVTEIEADRRLALIEYV
AHLTAQDWEATVCDLVRLGFIPQEIADDKKKLGIVAPILGSVLEQLSNGG
GAKAVNVDEIGDQVESLAEQYPLTIPPWFGLIVRAFSAIEGLGLGLDPSY
SIVNQCFPFLARRLLTDDSPRVRAALKSFLYGSEQQLKVERVNDMIEGYR
NFTNSFDEMAVTVGGAPLTSISASSFSSPSSSSSLAPLPNTREGLLTLAS
SAARREGGGKGYLEFDKPTMEVLQILFNKDGNFVQELVTDELVRMADAAI
KEVTGLVARRAKSTPLAISNFIRRPTAGGPLGTLALLPFFPLMTLLGILT
ALAERAETLSQLTEEDRESLKTLRLLLGVVAVRPTLDDSNSSSSNNSPFP
FPFPPLPPFFFPRPGRSSSSGTFPFPFPLPPPFGSPANSAAFVENALGVS
RQVLPEIAPGVAAIGRRFLSQLTGRILNRLADELDGPGNRL*
back to top
Synonyms
Publications