NO08G03010, NO08G03010 (gene) Nannochloropsis oceanica

Overview
NameNO08G03010
Unique NameNO08G03010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1056
Alignment locationchr8:836984..838039 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:836984..838039 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO08G03010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03010.1NO08G03010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582841gene_3632Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g209gene3768Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03010.1NO08G03010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03010 ID=NO08G03010|Name=NO08G03010|organism=Nannochloropsis oceanica|type=gene|length=1056bp
ATGCCGAACCCGCACCTCGAAGCGAAGGCGCGGGAGCTTCTCAAGCATGC
AATCTGTACAGCGCTAGCCGCCCAAGAGGAGATGCGCGCTCTGCGGGAGA
GGAATGGCAATGAGCAAGTGAAATGCCATGGCGGCAGCCTCCGTACGTCC
AGCGACGACGATGGTAGTCAGGGAATGGAAGATCAAAGCACTTTCTACAA
CAAGAAGATTGTCTCCCCGCCACCCGCCTCGAACAATAGGAGTCTGCGCC
ATAATGATGGTGGTGATGGCGCGGTGCGGCCTCGGCGTCCGAAAGAACGG
AGGATGAGAAGCATTGACCAAGGCGATGTGGACAAGGAGGAATACGAAAA
GATGCAACTACAACAGTCGCGGGATTCTTTCCCTTCTCTATCAAATTCCG
TTTCGTCCTCTTTCTTGACCATAAAGCAGAAACAGCGGGACGCAAAGCTT
CACGAGCTCAAGGCACGCGTCGAGCGATTGCTTCTCCGGGAAGAGCATAT
AGACGTGGTGGAGAGTAAAGAAAATGAACAGGACGAGGATATATATCTCA
ATGAGAGGGAAAGACACTCCATGATCCAAGGGGGCGATCTCGTCATCCCA
TCACATGTCCCGGCCGAGAGTCGGCGAAACGCGTCTCCCCCCTCTCCACC
GCAACCCGCAAGATGCCTACTCCATCTGCATTCCGAATCTAGGATTGATC
ATCACCCCATATCATCGAAAGATGCCGCCCTCTCTACCTCCTCCTTATTC
TCCTCCTCCTCTTCACCCACCCTACTCGAACGCGCCCTAGCTGCAAAACG
ACGGGCAAAACTGCTCTCTGCTTCTGGCGCCTCTTCCTCCTCACCCTCTT
CCTCCACCTTAACGTCATACAATACGCCAACAGAAGCAGCACCAACAGCA
CCAGCGGTAACAGGGGCATCAACGATACAAGTAAGTTTTGATGCGTCCAG
GCAGTCGTGGCAGCAACAAAGTACGGCGAGTAGCATACATCACGACGCAT
GGGTCTGGCCTCGTTTGACGGAGGATGAAATGCAGGATGCAAATGCAAAG
CGATAG
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protein sequence of NO08G03010.1

>NO08G03010.1-protein ID=NO08G03010.1-protein|Name=NO08G03010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=352bp
MPNPHLEAKARELLKHAICTALAAQEEMRALRERNGNEQVKCHGGSLRTS
SDDDGSQGMEDQSTFYNKKIVSPPPASNNRSLRHNDGGDGAVRPRRPKER
RMRSIDQGDVDKEEYEKMQLQQSRDSFPSLSNSVSSSFLTIKQKQRDAKL
HELKARVERLLLREEHIDVVESKENEQDEDIYLNERERHSMIQGGDLVIP
SHVPAESRRNASPPSPPQPARCLLHLHSESRIDHHPISSKDAALSTSSLF
SSSSSPTLLERALAAKRRAKLLSASGASSSSPSSSTLTSYNTPTEAAPTA
PAVTGASTIQVSFDASRQSWQQQSTASSIHHDAWVWPRLTEDEMQDANAK
R*
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Synonyms
Publications