NO08G02990, NO08G02990 (gene) Nannochloropsis oceanica

Overview
NameNO08G02990
Unique NameNO08G02990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2048
Alignment locationchr8:833179..835226 +

Link to JBrowse

Properties
Property NameValue
DescriptionCaax prenyl protease 1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:833179..835226 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0071586CAAX-box protein processing
GO:0006508proteolysis
GO:0019538protein metabolic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
GO:0004222metalloendopeptidase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR027057CAXX_Prtase_1
IPR032456Peptidase_M48_N
IPR001915Peptidase_M48
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO08G02990 vs. NCBI_GenBank
Match: XP_008611054.1 (hypothetical protein SDRG_07015 [Saprolegnia diclina VS20] >EQC35304.1 hypothetical protein SDRG_07015 [Saprolegnia diclina VS20])

HSP 1 Score: 396.4 bits (1017), Expect = 1.300e-106
Identity = 214/458 (46.72%), Postives = 299/458 (65.28%), Query Frame = 0
Query:   20 PTYKQQGTGMADVPYLELIVLFSFIVFVFEFYLDLRQYGALQRKDVPEALTTRISELDQAAASKNGGDSKDKDGTTTLLARLTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLAGKWFGKAEDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQSLKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQLILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGSRRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHTLQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFATR----PTIIALFLFFQAIWSPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNPSPDRWYSFYHYSHPPLTERLAAI 474
            P + ++G   + VPYLE  ++F   V+ FE YLD RQ+  L    +P AL + I+ +D  +  K            +LL +  +KFE +R YS+DK+  GFV     ++E   +LL G +P++W +S  L G ++G+       SL+F  +    + I +LPF L+SVFV+E+RHGFNKQ+L+ F  DK++ +ALSALLG P+  A+L +I+ GG  F  Y++LL  +F L+LLT+YP +I P+FN + PL  +  L+ +I+ALA+ + FPLT++FV DGS+RS+HSNAY YGFF +KRIVLFDTLLTQ   +E+++IL HELGHW   HTLQ F   QV++   F++F   + +  LF SFGF       P +I L LF Q +W+PVDK LSF  T  TR+NEF AD +AV LG+A+ LQ GL K+ +ENL+N +PD  YS YHYSHPPL ERL AI
Sbjct:    4 PWFCEEGWAPSPVPYLEGTLVFVAAVYAFETYLDYRQHAKLHETSLPPALASAIAHIDDVSNEKE----------PSLLVQTQAKFEKSRLYSLDKSRFGFVTGAIHELEGVLLLLGGYLPFMWVLSGRLVG-FYGEIPQ----SLLFAVLTSCKDVIFNLPFELYSVFVLEERHGFNKQTLRLFCTDKLQGLALSALLGLPLLAALLALIQWGGDGFVFYVWLLTFSFTLLLLTIYPVLIMPLFNTFTPL-PDGPLRHRIEALAATLHFPLTQLFVCDGSKRSSHSNAYMYGFFHSKRIVLFDTLLTQANDNEIVAILGHELGHWKLWHTLQGFAFQQVYVIALFYVFGRCMHDVALFRSFGFGATTPALPVMIGLTLFAQTLWAPVDKVLSFLLTYNTRQNEFAADAFAVQLGHADALQSGLTKISLENLANMNPDPMYSAYHYSHPPLLERLCAI 445          
BLAST of NO08G02990 vs. NCBI_GenBank
Match: XP_002900396.1 (CAAX prenyl protease 1 [Phytophthora infestans T30-4] >EEY60189.1 CAAX prenyl protease 1 [Phytophthora infestans T30-4])

HSP 1 Score: 394.4 bits (1012), Expect = 5.000e-106
Identity = 213/477 (44.65%), Postives = 302/477 (63.31%), Query Frame = 0
Query:   15 SELSFPTYKQQG--TGMADVPYLELIVLFSFIVFVFEFYLDLRQYGALQRKDVPEALTTRISELDQ----------AAASKNGGDSKDKDGTTTLLARLTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLAGKWFGKAEDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQSLKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQLILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGSRRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHTLQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFA---TRPTIIALFLFFQAIWSPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNPSPDRWYSFYHYSHPPLTERLAAICAR 477
            S L  P + + G     + VPY    ++F  +V++ E YLD+RQ+  L  K  P+ LT  I  L                                  + +KF+ +R Y +DK+  GFV  +++Q+EA A LLLG +P+VW MS          A++E   +L+ L +  +   ++ +PF L+S FVVE RHGFNKQ+L  F +D +K+  L  ++G P+T A++YVI+ GG  F++Y++  + AF +I++T+YP +I P+FNK+ PL EE +L+ +I+ALA+ + FPLTK+FV DGS+RS+HSNAYF+G FK+KRIVLFDTLL Q    E++++L HELGHW   HT Q F + QV++  +F++F   +++A+LF SFGFA    +P II   LF Q +W+PV+  LSF  TL TRKNEFQAD +AVDLG+A  L+ GL KL +ENLSN +PD  YS YHYSHPPL ERL AI AR
Sbjct:    5 SWLQAPYFTEPGWRPSTSPVPYFLGALIFMTVVYLLETYLDIRQHRKLHDKQFPKPLTEAIEGLGSYNIKXXXXXXXXXXXXXXXXXXXXXXXXXXXAIQAKFDKSRAYGLDKSTFGFVHGVYNQLEAIAFLLLGYLPFVWTMSGKALLFLGLDADNEIYRALMLLTLTTIRNTLVGIPFGLYSTFVVEARHGFNKQTLGLFFMDMIKSFGLFIVIGFPVTAALIYVIRWGGEYFYMYVWAFLFAFSVIMMTLYPVLIMPLFNKFTPL-EEGDLRTRIEALAASLNFPLTKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLEQATHDEIVAVLGHELGHWKLWHTAQGFVIQQVYILASFYVFGLCMNDAELFASFGFAGDSAKPVIIGFLLFSQTMWAPVEHVLSFLMTLNTRKNEFQADAFAVDLGHAVALKSGLTKLAIENLSNMNPDVLYSAYHYSHPPLVERLNAITAR 480          
BLAST of NO08G02990 vs. NCBI_GenBank
Match: ETL45293.1 (hypothetical protein L916_04606 [Phytophthora parasitica])

HSP 1 Score: 394.0 bits (1011), Expect = 6.500e-106
Identity = 208/457 (45.51%), Postives = 298/457 (65.21%), Query Frame = 0
Query:   32 VPYLELIVLFSFIVFVFEFYLDLRQYGALQRKDVPEALTTRISELDQ---------AAASKNGGDSKDKDGTTTLLARLTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLAGKWFGKAEDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQSLKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQLILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGSRRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHTLQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFA---TRPTIIALFLFFQAIWSPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNPSPDRWYSFYHYSHPPLTERLAAICAR 477
            VPY    ++F  +V++FE YLD+RQ+  L  K  P+ L   I  L                                 + +KF+ +R Y +DK+  GFV  +++Q+EA+A LLLG +P++W MS          A++E   +L+ L +  + + ++ +PF L+S FVVE RHGFNKQ+L  F +DK+K++ L  ++G P+T A++YVI+ GG  F++Y++  +  F ++++T+YP +I P+FNK+ PL EE EL+ +I+ALA+ + FPLTK+FV DGS+RS+HSNAYF+G FK+KRIVLFDTLL Q    E+++IL HELGHW   HT Q F + QV++  +F++F   +++A+LF SFGFA   ++P II   LF Q +W+PV+  LSF  TL TRKNEFQAD +AVDLG+   L+ GL KL +ENLSN +PD  YS YHYSHPPL ERL AI AR
Sbjct:   24 VPYFLGALVFMTVVYLFETYLDIRQHRKLHDKRFPKPLAEAIEGLGSYRMKXXXXXXXXXXXXXXXXXXXXXXXXXXXIQAKFDKSRAYGLDKSTFGFVHGVYNQLEASAFLLLGYLPFMWTMSGKALLSLGLDADNEIYRALMLLTLTTIRDTLVGIPFGLYSTFVVEARHGFNKQTLGLFFMDKIKSLGLFIVIGFPVTAALIYVIRWGGEYFYMYVWAFLFVFSVVMMTLYPVLIMPLFNKFTPL-EEGELRTRIEALAASLNFPLTKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLEQATHDEIVAILGHELGHWKLWHTAQGFVIQQVYILASFYVFGLCMNDAELFASFGFAGDSSKPVIIGFLLFSQTMWAPVEHVLSFLITLNTRKNEFQADAFAVDLGHDVALKSGLTKLAIENLSNMNPDVLYSAYHYSHPPLVERLNAITAR 479          
BLAST of NO08G02990 vs. NCBI_GenBank
Match: ETI52023.1 (hypothetical protein F443_04763 [Phytophthora parasitica P1569])

HSP 1 Score: 393.3 bits (1009), Expect = 1.100e-105
Identity = 208/457 (45.51%), Postives = 297/457 (64.99%), Query Frame = 0
Query:   32 VPYLELIVLFSFIVFVFEFYLDLRQYGALQRKDVPEALTTRISELDQ---------AAASKNGGDSKDKDGTTTLLARLTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLAGKWFGKAEDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQSLKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQLILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGSRRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHTLQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFA---TRPTIIALFLFFQAIWSPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNPSPDRWYSFYHYSHPPLTERLAAICAR 477
            VPY    ++F  +V++FE YLD+RQ+  L  K  P+ L   I  L                                 + +KF+ +R Y +DK+  GFV  +++Q+EA+A LLLG +P++W MS          A++E   +L+ L +  + + ++ +PF L+S FVVE RHGFNKQ+L  F +DK+K+  L  ++G P+T A++YVI+ GG  F++Y++  +  F ++++T+YP +I P+FNK+ PL EE EL+ +I+ALA+ + FPLTK+FV DGS+RS+HSNAYF+G FK+KRIVLFDTLL Q    E+++IL HELGHW   HT Q F + QV++  +F++F   +++A+LF SFGFA   ++P II   LF Q +W+PV+  LSF  TL TRKNEFQAD +AVDLG+   L+ GL KL +ENLSN +PD  YS YHYSHPPL ERL AI AR
Sbjct:   24 VPYFLGALVFMTVVYLFETYLDIRQHRKLHDKRFPKPLAEAIEGLGSYRMKXXXXXXXXXXXXXXXXXXXXXXXXXXXIQAKFDKSRAYGLDKSTFGFVHGVYNQLEASAFLLLGYLPFMWTMSDKALLSLGLDADNEIYRALMLLTLTTIRDTLVGIPFGLYSTFVVEARHGFNKQTLGLFFMDKIKSFGLFIVIGFPVTAALIYVIRWGGEYFYMYVWAFLFVFSVVMMTLYPVLIMPLFNKFTPL-EEGELRTRIEALAASLNFPLTKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLEQATHDEIVAILGHELGHWKLWHTAQGFVIQQVYILASFYVFGLCMNDAELFASFGFAGDSSKPVIIGFLLFSQTMWAPVEHVLSFLITLNTRKNEFQADAFAVDLGHDVALKSGLTKLAIENLSNMNPDVLYSAYHYSHPPLVERLNAITAR 479          
BLAST of NO08G02990 vs. NCBI_GenBank
Match: ETL98448.1 (hypothetical protein L917_04490 [Phytophthora parasitica] >ETM51609.1 hypothetical protein L914_04599 [Phytophthora parasitica] >ETP49699.1 hypothetical protein F442_04842 [Phytophthora parasitica P10297] >KUF64482.1 CAAX prenyl protease 1 [Phytophthora nicotianae])

HSP 1 Score: 393.3 bits (1009), Expect = 1.100e-105
Identity = 208/457 (45.51%), Postives = 297/457 (64.99%), Query Frame = 0
Query:   32 VPYLELIVLFSFIVFVFEFYLDLRQYGALQRKDVPEALTTRISELDQ---------AAASKNGGDSKDKDGTTTLLARLTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLAGKWFGKAEDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQSLKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQLILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGSRRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHTLQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFA---TRPTIIALFLFFQAIWSPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNPSPDRWYSFYHYSHPPLTERLAAICAR 477
            VPY    ++F  +V++FE YLD+RQ+  L  K  P+ L   I  L                                 + +KF+ +R Y +DK+  GFV  +++Q+EA+A LLLG +P++W MS          A++E   +L+ L +  + + ++ +PF L+S FVVE RHGFNKQ+L  F +DK+K+  L  ++G P+T A++YVI+ GG  F++Y++  +  F ++++T+YP +I P+FNK+ PL EE EL+ +I+ALA+ + FPLTK+FV DGS+RS+HSNAYF+G FK+KRIVLFDTLL Q    E+++IL HELGHW   HT Q F + QV++  +F++F   +++A+LF SFGFA   ++P II   LF Q +W+PV+  LSF  TL TRKNEFQAD +AVDLG+   L+ GL KL +ENLSN +PD  YS YHYSHPPL ERL AI AR
Sbjct:   24 VPYFLGALVFMTVVYLFETYLDIRQHRKLHDKRFPKPLAEAIEGLGSYRMKXXXXXXXXXXXXXXXXXXXXXXXXXXXIQAKFDKSRAYGLDKSTFGFVHGVYNQLEASAFLLLGYLPFMWTMSGKALLSLGLDADNEIYRALMLLTLTTIRDTLVGIPFGLYSTFVVEARHGFNKQTLGLFFMDKIKSFGLFIVIGFPVTAALIYVIRWGGEYFYMYVWAFLFVFSVVMMTLYPVLIMPLFNKFTPL-EEGELRTRIEALAASLNFPLTKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLEQATHDEIVAILGHELGHWKLWHTAQGFVIQQVYILASFYVFGLCMNDAELFASFGFAGDSSKPVIIGFLLFSQTMWAPVEHVLSFLITLNTRKNEFQADAFAVDLGHDVALKSGLTKLAIENLSNMNPDVLYSAYHYSHPPLVERLNAITAR 479          
BLAST of NO08G02990 vs. NCBI_GenBank
Match: XP_008902128.1 (hypothetical protein PPTG_09033 [Phytophthora parasitica INRA-310] >ETN12113.1 hypothetical protein PPTG_09033 [Phytophthora parasitica INRA-310])

HSP 1 Score: 393.3 bits (1009), Expect = 1.100e-105
Identity = 208/457 (45.51%), Postives = 297/457 (64.99%), Query Frame = 0
Query:   32 VPYLELIVLFSFIVFVFEFYLDLRQYGALQRKDVPEALTTRISELDQ---------AAASKNGGDSKDKDGTTTLLARLTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLAGKWFGKAEDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQSLKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQLILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGSRRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHTLQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFA---TRPTIIALFLFFQAIWSPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNPSPDRWYSFYHYSHPPLTERLAAICAR 477
            VPY    ++F  +V++FE YLD+RQ+  L  K  P+ L   I  L                                 + +KF+ +R Y +DK+  GFV  +++Q+EA+A LLLG +P++W MS          A++E   +L+ L +  + + ++ +PF L+S FVVE RHGFNKQ+L  F +DK+K+  L  ++G P+T A++YVI+ GG  F++Y++  +  F ++++T+YP +I P+FNK+ PL EE EL+ +I+ALA+ + FPLTK+FV DGS+RS+HSNAYF+G FK+KRIVLFDTLL Q    E+++IL HELGHW   HT Q F + QV++  +F++F   +++A+LF SFGFA   ++P II   LF Q +W+PV+  LSF  TL TRKNEFQAD +AVDLG+   L+ GL KL +ENLSN +PD  YS YHYSHPPL ERL AI AR
Sbjct:   24 VPYFLGALVFMTVVYLFETYLDIRQHRKLHDKRFPKPLAEAIEGLGSYRMKXXXXXXXXXXXXXXXXXXXXXXXXXXXIQAKFDKSRAYGLDKSTFGFVHGVYNQLEASAFLLLGYLPFMWTMSGKALLSLGLDADNEIYRALMLLTLTTIRDTLVGIPFGLYSTFVVEARHGFNKQTLGLFFMDKIKSFGLFIVIGFPVTAALIYVIRWGGEYFYMYVWAFLFVFSVVMMTLYPVLIMPLFNKFTPL-EEGELRTRIEALAASLNFPLTKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLEQATHDEIVAILGHELGHWKLWHTAQGFVIQQVYILASFYVFGLCMNDAELFASFGFAGDSSKPVIIGFLLFSQTMWAPVEHVLSFLITLNTRKNEFQADAFAVDLGHDVALKSGLTKLAIENLSNMNPDVLYSAYHYSHPPLVERLNAITAR 479          
BLAST of NO08G02990 vs. NCBI_GenBank
Match: ETO80780.1 (hypothetical protein F444_04815 [Phytophthora parasitica P1976])

HSP 1 Score: 393.3 bits (1009), Expect = 1.100e-105
Identity = 208/457 (45.51%), Postives = 297/457 (64.99%), Query Frame = 0
Query:   32 VPYLELIVLFSFIVFVFEFYLDLRQYGALQRKDVPEALTTRISELDQ---------AAASKNGGDSKDKDGTTTLLARLTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLAGKWFGKAEDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQSLKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQLILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGSRRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHTLQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFA---TRPTIIALFLFFQAIWSPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNPSPDRWYSFYHYSHPPLTERLAAICAR 477
            VPY    ++F  +V++FE YLD+RQ+  L  K  P+ L   I  L                                 + +KF+ +R Y +DK+  GFV  +++Q+EA+A LLLG +P++W MS          A++E   +L+ L +  + + ++ +PF L+S FVVE RHGFNKQ+L  F +DK+K+  L  ++G P+T A++YVI+ GG  F++Y++  +  F ++++T+YP +I P+FNK+ PL EE EL+ +I+ALA+ + FPLTK+FV DGS+RS+HSNAYF+G FK+KRIVLFDTLL Q    E+++IL HELGHW   HT Q F + QV++  +F++F   +++A+LF SFGFA   ++P II   LF Q +W+PV+  LSF  TL TRKNEFQAD +AVDLG+   L+ GL KL +ENLSN +PD  YS YHYSHPPL ERL AI AR
Sbjct:   24 VPYFLGALVFMTVVYLFETYLDIRQHRKLHDKRFPKPLAEAIKGLGSYRMKXXXXXXXXXXXXXXXXXXXXXXXXXXXIQAKFDKSRAYGLDKSTFGFVHGVYNQLEASAFLLLGYLPFMWTMSGKALLSLGLDADNEIYRALMLLTLTTIRDTLVGIPFGLYSTFVVEARHGFNKQTLGLFFMDKIKSFGLFIVIGFPVTAALIYVIRWGGEYFYMYVWAFLFVFSVVMMTLYPVLIMPLFNKFTPL-EEGELRTRIEALAASLNFPLTKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLEQATHDEIVAILGHELGHWKLWHTAQGFVIQQVYILASFYVFGLCMNDAELFASFGFAGDSSKPVIIGFLLFSQTMWAPVEHVLSFLITLNTRKNEFQADAFAVDLGHDVALKSGLTKLAIENLSNMNPDVLYSAYHYSHPPLVERLNAITAR 479          
BLAST of NO08G02990 vs. NCBI_GenBank
Match: ETK91894.1 (hypothetical protein L915_04651 [Phytophthora parasitica] >ETP21822.1 hypothetical protein F441_04764 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 391.7 bits (1005), Expect = 3.200e-105
Identity = 207/457 (45.30%), Postives = 297/457 (64.99%), Query Frame = 0
Query:   32 VPYLELIVLFSFIVFVFEFYLDLRQYGALQRKDVPEALTTRISELDQ---------AAASKNGGDSKDKDGTTTLLARLTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLAGKWFGKAEDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQSLKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQLILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGSRRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHTLQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFA---TRPTIIALFLFFQAIWSPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNPSPDRWYSFYHYSHPPLTERLAAICAR 477
            VPY    ++F  +V++FE YLD+RQ+  L  K  P+ L   I  L                                 + +KF+ +R Y +DK+  GFV  +++Q+EA+A LLLG +P++W +S          A++E   +L+ L +  + + ++ +PF L+S FVVE RHGFNKQ+L  F +DK+K+  L  ++G P+T A++YVI+ GG  F++Y++  +  F ++++T+YP +I P+FNK+ PL EE EL+ +I+ALA+ + FPLTK+FV DGS+RS+HSNAYF+G FK+KRIVLFDTLL Q    E+++IL HELGHW   HT Q F + QV++  +F++F   +++A+LF SFGFA   ++P II   LF Q +W+PV+  LSF  TL TRKNEFQAD +AVDLG+   L+ GL KL +ENLSN +PD  YS YHYSHPPL ERL AI AR
Sbjct:   24 VPYFLGALVFMTVVYLFETYLDIRQHRKLHDKRFPKPLAEAIEGLGSYRMKXXXXXXXXXXXXXXXXXXXXXXXXXXXIQAKFDKSRAYGLDKSTFGFVHGVYNQLEASAFLLLGYLPFMWTVSGKALLSLGLDADNEIYRALMLLTLTTIRDTLVGIPFGLYSTFVVEARHGFNKQTLGLFFMDKIKSFGLFIVIGFPVTAALIYVIRWGGEYFYMYVWAFLFVFSVVMMTLYPVLIMPLFNKFTPL-EEGELRTRIEALAASLNFPLTKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLEQATHDEIVAILGHELGHWKLWHTAQGFVIQQVYILASFYVFGLCMNDAELFASFGFAGDSSKPVIIGFLLFSQTMWAPVEHVLSFLITLNTRKNEFQADAFAVDLGHDVALKSGLTKLAIENLSNMNPDVLYSAYHYSHPPLVERLNAITAR 479          
BLAST of NO08G02990 vs. NCBI_GenBank
Match: PKK64856.1 (hypothetical protein RhiirC2_665808 [Rhizophagus irregularis])

HSP 1 Score: 386.3 bits (991), Expect = 1.400e-103
Identity = 195/447 (43.62%), Postives = 287/447 (64.21%), Query Frame = 0
Query:   31 DVPYLELIVLFSFIVFVFEFYLDLRQYGALQRKDVPEALTTRISELDQAAASKNGGDSKDKDGTTTLLARLTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLAGKWFGKA----EDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQSLKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQLILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGSRRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHTLQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFATRPTIIALFLFFQAIWSPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNPSPDRWYSFYHYSHPPLTERLAAI 474
            D PY E ++ FS+ V+ FE YL +RQY  L+    P++L                            +  +  KF   ++Y +DKA   FV  LF Q+++T M++   +PW+W    NL+G+W   A    + E   SL+F  I  ++  +I LP SL+  FV+E+RHGFNK +L  F +D +K   ++ ++G P+   VL +IK  G NF+ Y+++ ++ F  ILLT+YPT+I P+FNK   L  E EL+ QI+ALASR+ FPL K++V+DGS+RS HSNAYFYGFFKNKRIVL+DTL+ Q  + E+++I+ HELGHW  +HT+++  +SQ+H F  FF+FS  ++N  L+ SFGF T+P +I  F+ FQ I++PV+  ++F   + +RK+EF+AD YA  LGY   L+ GL+K+Q++NL N + D WYS YH+SHPPL ERL+AI
Sbjct:   12 DTPYKEFVLAFSWAVYTFEQYLSVRQYRKLREPQPPKSLQD--------------------------IEEVREKFRKTQEYGLDKAKFEFVSALFGQIQSTCMIVFDILPWLW----NLSGEWLAYAGYGPDHEITQSLIFTVILTLLSYLISLPLSLYFTFVIEERHGFNKMTLGLFFMDMIKGFLIAGVIGLPILSLVLQIIKWSGENFYFYVWIFMIIFTFILLTIYPTLIQPLFNKVTVL-PEGELRGQIEALASRINFPLKKLYVIDGSKRSGHSNAYFYGFFKNKRIVLYDTLIEQANNGEIVAIVGHELGHWYLNHTVKILIISQIHNFFLFFVFSQFINNTSLYRSFGFETQPILIG-FMLFQFIYAPVENVVAFLMNILSRKHEFEADAYAKKLGYGVQLRSGLIKIQIKNLGNLNNDPWYSAYHFSHPPLPERLSAI 426          
BLAST of NO08G02990 vs. NCBI_GenBank
Match: EXX73371.1 (Ste24p [Rhizophagus irregularis DAOM 197198w] >GBC37719.1 STE24 endopeptidase [Rhizophagus irregularis DAOM 181602] >PKC03198.1 hypothetical protein RhiirA5_451995 [Rhizophagus irregularis] >POG71138.1 peptidase family M48 protein [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 386.0 bits (990), Expect = 1.800e-103
Identity = 195/447 (43.62%), Postives = 287/447 (64.21%), Query Frame = 0
Query:   31 DVPYLELIVLFSFIVFVFEFYLDLRQYGALQRKDVPEALTTRISELDQAAASKNGGDSKDKDGTTTLLARLTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLAGKWFGKA----EDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQSLKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQLILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGSRRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHTLQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFATRPTIIALFLFFQAIWSPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNPSPDRWYSFYHYSHPPLTERLAAI 474
            D PY E ++ FS+ V+ FE YL +RQY  L+    P++L                            +  +  KF   ++Y +DKA   FV  LF Q+++T M++   +PW+W    NL+G+W   A    + E   SL+F  I  ++  +I LP SL+  FV+E+RHGFNK +L  F +D +K   ++ ++G P+   VL +IK  G NF+ Y+++ ++ F  ILLT+YPT+I P+FNK   L  E EL+ QI+ALASR+ FPL K++V+DGS+RS HSNAYFYGFFKNKRIVL+DTL+ Q  + E+++I+ HELGHW  +HT+++  +SQ+H F  FF+FS  ++N  L+ SFGF T+P +I  F+ FQ I++PV+  ++F   + +RK+EF+AD YA  LGY   L+ GL+K+Q++NL N + D WYS YH+SHPPL ERL+AI
Sbjct:   12 DTPYKEFVLAFSWAVYTFEQYLSVRQYRKLREPHPPKSLQD--------------------------IEEVREKFRKTQEYGLDKAKFEFVSALFGQIQSTCMIVFDILPWLW----NLSGEWLAYAGYGPDHEITQSLIFTVILTLLSYLISLPLSLYFTFVIEERHGFNKMTLGLFFMDMIKGFLIAGVIGLPILSLVLQIIKWSGENFYFYVWIFMIIFTFILLTIYPTLIQPLFNKVTVL-PEGELRGQIEALASRINFPLKKLYVIDGSKRSGHSNAYFYGFFKNKRIVLYDTLIEQANNGEIVAIVGHELGHWYLNHTVKILIISQIHNFFLFFVFSQFINNTSLYRSFGFETQPILIG-FMLFQFIYAPVENVVAFLMNILSRKHEFEADAYAKKLGYGVQLRSGLIKIQIKNLGNLNNDPWYSAYHFSHPPLPERLSAI 426          
The following BLAST results are available for this feature:
BLAST of NO08G02990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008611054.11.300e-10646.72hypothetical protein SDRG_07015 [Saprolegnia dicli... [more]
XP_002900396.15.000e-10644.65CAAX prenyl protease 1 [Phytophthora infestans T30... [more]
ETL45293.16.500e-10645.51hypothetical protein L916_04606 [Phytophthora para... [more]
ETI52023.11.100e-10545.51hypothetical protein F443_04763 [Phytophthora para... [more]
ETL98448.11.100e-10545.51hypothetical protein L917_04490 [Phytophthora para... [more]
XP_008902128.11.100e-10545.51hypothetical protein PPTG_09033 [Phytophthora para... [more]
ETO80780.11.100e-10545.51hypothetical protein F444_04815 [Phytophthora para... [more]
ETK91894.13.200e-10545.30hypothetical protein L915_04651 [Phytophthora para... [more]
PKK64856.11.400e-10343.62hypothetical protein RhiirC2_665808 [Rhizophagus i... [more]
EXX73371.11.800e-10343.62Ste24p [Rhizophagus irregularis DAOM 197198w] >GBC... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008730NSK008730Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02990.1NO08G02990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582830gene_3630Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g207gene3770Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02990.1NO08G02990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02990 ID=NO08G02990|Name=NO08G02990|organism=Nannochloropsis oceanica|type=gene|length=2048bp
ATGCCCCCAAATGATGCCTGGGCGATCATCCGCAATTTCGGATCGGAACT
TTCTTTCCCCACCTACAAGCAACAAGGGACTGGCATGGCGGACGTGCCAT
ACCTGGAGTTGATAGTCCTCTTCTCCTTCATCGTCTTTGTCTTTGAGTTC
TACCTGGACCTGCGGCAGTACGGGGCCTTGCAACGCAAGGACGTGCCTGA
AGCCTTGACGACACGCATCAGCGAGCTCGATCAGGCAGCCGCGTCGAAGA
ATGGAGGAGACTCGAAGGACAAGGATGGCACCACGACCCTGCTCGCTCGT
TTGACCTCGAAATTTGAAGCTGCAAGAAAATATTCTATTGATAAGGCGCA
TCTTGGGTTTGTTGAAACTCTCTTCTCCCAAATGGAAGCGACGGCGATGC
TCTTGCTTGGAAGTATGCCTTGGGTATGGGACATGTCGGTCAACTTAGCC
GGGAAATGGTTTGGGAAAGCAGAAGACGAGTATATCATCTCTCTCGTCTT
CCTAGGTATCAACATGGTGATTGAGAATATCATCCACCTACCCTTCTCCC
TTTGGTCCGTCTTTGTGGTCGAGCAACGGCATGGTTTCAACAAGCAGTCC
CTCAAGGACTTCCTCCTTGATAAAGTCAAGGCCGTCGCCCTCTCGGCCCT
CCTCGGCAGCCCTATGACCGTCGCTGTCCTCTATGTCATCAAAGCCGGCG
GTCGAAACTTTTTCCTCTACCTCTACCTTCTCGTGCTCGCCTTCCAGCTC
ATTCTCCTCACAGTCTATCCTACCGTCATCGCTCCAATCTTCAATAAATA
CGAACCTCTGGCGGAAGAATCTGAATTAAAACCTCAAATTGACGCCTTGG
CATCGCGGGTGAAGTTTCCGTTGACCAAGGTGTTTGTGGTAGATGGATCG
CGGAGAAGTGCGCATTCAAACGCGTATTTTTATGGGTTTTTTAAGAATAA
GCGGATTGTGCTGTTTGATACGCTGCTGACGCAGgtaggtatggaggaag
ggaagcagaaatggttggagtgagcgtgagaaggttgaacgaagaagttt
acggtttgtgaatatgtccgactcacttcgcctatcgtcccctcttccac
agGTGCAATCCTCGGAGCTGATTTCGATCCTCGCCCACGAGCTCGGGCAC
TGGGCGCACAGCCACACCCTCCAAATGTTTTTCGTCAGTCAAGTGCACCT
CTTCCTGGCCTTCTTCCTCTTCTCCTCTTCTCTGGACAACGCCGACCTAT
TCCATTCGTTTGGCTTCGCGACTCGCCCCACGATCATTGCTCTATTCCTC
TTTTTTCAAGCGATTTGGTCCCCGGTTGACAAGGCGTTGAGCTTTGGCTT
CACGTTGTGGACCCGCAAAAACGAGTTCCAGgtagggagcggagggtaag
aagggcgcgacggaggcagggagggagcaagacattggaaaaaaggcttt
aagtgtgggacatggtccttacatttcgtctttaccaatctcctttgcct
cctccccccattcctcctgttttggaggggttgatacgccatcgttccag
gctccagcaaaggcttgcaacgcggccacgagaaacagcacatttacact
ttatccgactttccccttgtcggaaagttgcgattcaatcattcttctca
tccttaccccccctcttttcagGCAGACGAATACGCAGTCGATCTGGGTT
ACGCCGAGGACTTACAGCGAGGGCTGGTCAAGCTGCAGgtaggtctccct
cgtccccccctccccctctctctagcgcgtacctcgagtcgagaaccacc
acgccccgtcacgtctcttgttgttcgattgcccctcctggcccatgtct
atctcatcgattcacgctcacattcctgcacgcattactgtatcctcata
ctcacgttctcgcattcagGTTGAGAATCTTTCCAACCCCTCCCCTGATC
GATGGTATAGCTTCTACCATTACTCCCACCCGCCTCTGACGGAGCGATTG
GCAGCAATATGTGCGCGGCAAGAGGGGAGGGAGAAGAAGAGGGGGTGA
back to top

protein sequence of NO08G02990.1

>NO08G02990.1-protein ID=NO08G02990.1-protein|Name=NO08G02990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=486bp
MPPNDAWAIIRNFGSELSFPTYKQQGTGMADVPYLELIVLFSFIVFVFEF
YLDLRQYGALQRKDVPEALTTRISELDQAAASKNGGDSKDKDGTTTLLAR
LTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLA
GKWFGKAEDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQS
LKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQL
ILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGS
RRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHT
LQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFATRPTIIALFLFFQAIW
SPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNP
SPDRWYSFYHYSHPPLTERLAAICARQEGREKKRG*
back to top
Synonyms
Publications