NO08G02960, NO08G02960 (gene) Nannochloropsis oceanica

Overview
NameNO08G02960
Unique NameNO08G02960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1863
Alignment locationchr8:825525..827387 +

Link to JBrowse

Properties
Property NameValue
DescriptionTh1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:825525..827387 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045892negative regulation of transcription, DNA-templated
GO:0045892negative regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR006942TH1
Homology
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_008608976.1 (hypothetical protein SDRG_05059 [Saprolegnia diclina VS20] >EQC37456.1 hypothetical protein SDRG_05059 [Saprolegnia diclina VS20])

HSP 1 Score: 141.4 bits (355), Expect = 9.700e-30
Identity = 138/548 (25.18%), Postives = 237/548 (43.25%), Query Frame = 0
Query:    3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTALFDGSVDREEA---------DALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRA--HPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAEEG 540
            ++  M+  + WR  L+E+   H    LL  Y ++ +S AGH+ E+A + + + ++SV   ++T++L ++P A   ++   +  L ++C   AY H ++QEVL +++  L  + G             + +A+  K  R+RQEL        E+ GG         + +  H L   Q      + A+                AI  ++ E   S     +L   Y   S                                           P+A++R   +L+ L  A+F P + + T S R+++  +L  A++ + D S+    A         +A+ + L E S +   E  L++NM  S    +++ +LR    PVVAMG LHWL   ++   F N    +    V ++LL+  ++      P +F  L   L  +P  +   ++++KR+ L+C V LM+ G+VLPVL F  Q    +D AL+R FV + L    PP+S  F     ++L    V  ALKS   D   +A L+     CA+ G
Sbjct:  335 WLKAMLHDQQWRLMLIELAEKHSTCGLL-QYAIRRISEAGHHKEIASITNANVFFSVFNAIVTDMLQRMPSASVDEVRDDLYALQKMCAHAAYSHVYTQEVLLQLDTHLRAQDG-------------AAMALRTKLDRLRQELHA---HVLEKHGG--------RKVQAFHVLKRAQLTQTFPDLAQ----------------AIDMLYRERKCSAACAELLKQVYARPS-----------------------------------------PPPVAHVREHLVLEYLTDALFHPYESI-TESHRSASAYVLAYAASVVDDRSLLDTHAMSAHACPPFEAVAKALEETSVVCKSETTLSYNMHESE---AIEKVLRTMETPVVAMGVLHWLSRLLESKSFLNGPFLHACFPVFLKLLRHDIALHMAQWPTVFNVLVKALMCQPESNPVKVLELKRETLRCMVHLMTCGYVLPVLHFIVQNTDALDQALLRNFVQLVLSRIAPPFSERFVTEWTTVLVHPKVLLALKSCPTD--TKAKLQQYAAYCADLG 794          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: CCA14051.1 (negative elongation factor putative [Albugo laibachii Nc14])

HSP 1 Score: 134.0 bits (336), Expect = 1.600e-27
Identity = 129/557 (23.16%), Postives = 228/557 (40.93%), Query Frame = 0
Query:    3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAR---EGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST-----------------ALFDGSVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAEEG 540
            ++  M+  K WRR L+++  AHK   LL  Y ++ +S AG++ E+A L + + ++ V  GVL + L ++      ++ + +  L RICC + Y + +++E+L  ++  L +     G                     +R  L R  +E    A        +VG                     E   P++ R   +       A+L +F     S+     L++ Y  S+                                           P  +LR P +L  L+  +F+P     T  ++     +  VAS                      G +  +E + +   L +AS +   ++ L +NM+ S I   L  ++   PVV++G L+WL + ++   F  S   +     L+++L+  +    LH       L   LTL+       I++++R++L+C VF+++ G+V PVL F  + + E+D AL+R FV V L +  PPYS  F  AL+S++    V+ A+ S  DD   +A LR     C   G
Sbjct:  325 WLTAMLKDKKWRRMLVKLAEAHKTCTLL-QYAIRRISEAGYHQEVASLPTANAFFPVFNGVLIDSLKRISTDSEEEMAKNITNLQRICCQSEYSYFYAEELLSHLDDKLFQLQMHPG------------CKNAAFIDHVRIRLHRMGYEIQNAA------TNKVGA------------------KIEPFYPLRRRYIYDRHTLFCDAVLSIFKTKKCSEQAAQALVEQYKGSN-----------------------------------------PPPAIHLRTP-VLYGLIDPLFNPSTSATTPFKQNCITLLAYVASVRDNRSVLSPCQDGDRQEKNLVGQIGEDEMENIACVLADASAICKSDKTLGYNMNQSGIVQRLISMIET-PVVSIGVLYWLEMILESSSFVGSTLLHICFPSLLQILKASIRLHKLHWAIALRILITFLTLETENDPVKILELRRESLRCMVFMITAGYVFPVLDFITKNVLELDQALLRHFVTVLLSSIAPPYSTRFLSALSSIIIHPKVQSAIASGSDD--CKARLRAFALYCEARG 799          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_008871271.1 (hypothetical protein H310_07637 [Aphanomyces invadans] >ETW00246.1 hypothetical protein H310_07637 [Aphanomyces invadans])

HSP 1 Score: 122.1 bits (305), Expect = 6.100e-24
Identity = 82/275 (29.82%), Postives = 136/275 (49.45%), Query Frame = 0
Query:  276 PLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTA------LFDGSVDR-----EEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAEEG 540
            P+A+LR   +L  L  A+F P + +  A+ R +   +L  A+T       L   + D      E    +   L  AS +   E  L++NM+ S     L   + A PVV+MG LHWL++ +    F+N   F+    VL+ LL+  +S      P +F+ L   + L+P  +   +++ K++ L+C V LM+ G++ PVL F      ++D AL+R F+ + L    PPYS  F  AL+ +L    V +AL++   +  +  L  F+    AE+G
Sbjct:  553 PVAHLREHVILQRLTTALFHPYEAMENAAHRTACAFVLAYAATVQDPRPLLATTTTDTLEWSDEHVQGIAAALEAASIVCKSETTLSYNMNESDAVDKLVRSM-AIPVVSMGILHWLQLLLASKTFYNGPFFHAAFPVLLNLLRQAISLHVAQWPTVFQVLVTAVRLQPESNPVKVLETKKETLRCLVHLMTCGYIFPVLHFIATQTDDLDQALLRNFIQLVLARIAPPYSLRFTTALSRILVHPKVSQALRTCPAE-TKTKLKEFVHVCQAEDG 825          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_008871272.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETW00247.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 122.1 bits (305), Expect = 6.100e-24
Identity = 82/275 (29.82%), Postives = 136/275 (49.45%), Query Frame = 0
Query:  276 PLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTA------LFDGSVDR-----EEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAEEG 540
            P+A+LR   +L  L  A+F P + +  A+ R +   +L  A+T       L   + D      E    +   L  AS +   E  L++NM+ S     L   + A PVV+MG LHWL++ +    F+N   F+    VL+ LL+  +S      P +F+ L   + L+P  +   +++ K++ L+C V LM+ G++ PVL F      ++D AL+R F+ + L    PPYS  F  AL+ +L    V +AL++   +  +  L  F+    AE+G
Sbjct:  427 PVAHLREHVILQRLTTALFHPYEAMENAAHRTACAFVLAYAATVQDPRPLLATTTTDTLEWSDEHVQGIAAALEAASIVCKSETTLSYNMNESDAVDKLVRSM-AIPVVSMGILHWLQLLLASKTFYNGPFFHAAFPVLLNLLRQAISLHVAQWPTVFQVLVTAVRLQPESNPVKVLETKKETLRCLVHLMTCGYIFPVLHFIATQTDDLDQALLRNFIQLVLARIAPPYSLRFTTALSRILVHPKVSQALRTCPAE-TKTKLKEFVHVCQAEDG 699          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_009831294.1 (hypothetical protein H257_07454 [Aphanomyces astaci] >ETV79453.1 hypothetical protein H257_07454 [Aphanomyces astaci])

HSP 1 Score: 118.6 bits (296), Expect = 6.800e-23
Identity = 75/254 (29.53%), Postives = 127/254 (50.00%), Query Frame = 0
Query:  276 PLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTALFDG------------SVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518
            P+A++R   +L  L  A+F P + + +A  R S   +L  A+T                 S D  +   +   L  AST+   E  L++NM+ S     L   + A PVV+MG LHWL++ +    F+N   F+    V+M LL+  ++      P +F+ L   + L+P  +   +++ K++ L+C V LM+ G++ PVL F      ++D AL+R F+ + L+   PPYS  F   L+ +L    V +AL++
Sbjct:  540 PVAHIREHVILRRLTTALFHPYEAVESAGHRTSCAFVLAYAATVQDTRPLLATTTDDQAMSWDEAQVHTIAAALEAASTVCKSETTLSYNMNESDAVDKLVRSM-AIPVVSMGILHWLQLLVASKTFYNGPFFHAAFPVVMSLLRQAIALHVGQWPTVFQVLVTSVRLQPESNPVKVLETKKETLRCMVHLMTCGYIFPVLHFIATQTDDLDQALLRHFIQLVLMRIAPPYSLRFTTVLSDILLHPKVSQALRT 792          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: CCI44529.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 113.6 bits (283), Expect = 2.200e-21
Identity = 66/203 (32.51%), Postives = 111/203 (54.68%), Query Frame = 0
Query:  337 LREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAEEG 540
            L +AST+   ++ L +NM+ S +   L  ++   PVV++G L+WL + ++ P F  S   +     L+++L+  +    LH       L   LTL+       I++++R++L+C VF+++ G+V PVL F  + +PE+D AL+R FV V L +  PPYS  F  AL+S++    V+ A+ S  DD   +A L+     C   G
Sbjct:  519 LADASTICKSDKTLGYNMNQSGVVKRLISMMET-PVVSIGVLYWLEIILKSPSFVGSTLLHVCFPSLLQILKASIRFHKLHWAIALRILVTFLTLETENDPVKILELRRESLRCMVFMITAGYVFPVLDFIMKNVPELDQALLRHFVTVLLASIAPPYSRRFLSALSSIIVHPKVQSAIASGSDD--CKARLKAFALYCEARG 718          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: OQR84623.1 (negative elongation factor [Achlya hypogyna])

HSP 1 Score: 112.8 bits (281), Expect = 3.700e-21
Identity = 84/271 (31.00%), Postives = 131/271 (48.34%), Query Frame = 0
Query:  276 PLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTALFDGS--VDREEA-------DALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAE 538
            P+A+LR   +L+ L  A+F P + +  A R  +AC  +   + ++ DG   +D + A       +A+   L EAS +   E  L++NM  S     L+  +   PVVAMG LHWL   ++   F N    +    V ++LL+  V    +  P +F  L   L  +P  +   ++++KR+ L+C V LM+ G+VLPVL F  +    +D AL+R FV +       P+S  F      +L    V  ALKS   D   +A L    T CA+
Sbjct:  516 PVAHLREVAVLEKLTDALFHPYESIGEAHR--AACAYVLAYAGSVVDGRSLLDTQPATLTPPPLEAIVTALVEASAICKSETTLSYNMHESEAVEKLQRAMET-PVVAMGVLHWLSRLLESKSFLNGPFLHACFPVFLKLLRHDVELHMVQWPTVFRVLVKALMCQPESNPVKVLELKRETLRCMVHLMTCGYVLPVLHFILRSTDALDQALLRNFVQLVHARIAAPFSDRFVGEWTKVLVHPKVLLALKSCPTD--TKAKLAHFATYCAD 781          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: KUF79835.1 (Negative elongation factor D [Phytophthora nicotianae] >KUF85328.1 Negative elongation factor D [Phytophthora nicotianae])

HSP 1 Score: 110.2 bits (274), Expect = 2.400e-20
Identity = 77/250 (30.80%), Postives = 123/250 (49.20%), Query Frame = 0
Query:  271 AKVKGPLAYLRHPQ---LLDALVKAIFDPKKRLNTASRRASACQILTVASTALFDGSVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518
            +K   P+A+LR P     L A   +  D +  L T   + S+ Q+            VD +  ++  + L EAS +   +  L +NM+ S +   L  ++   PVV+MG LHWL V +  P F +S   +     L+R+L+  +       P  F  L   L L P  +    +++KR+ L+C VF+++ G+VLPVL F      E+D AL+R F+ +      PP+SP F+ AL  +L    V+ A+KS
Sbjct:  525 SKTPPPVAHLRDPMNCVFLLAYAASTKDERSLLQTGV-QGSSNQV-----------EVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVLLTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKS 761          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: GAX21063.1 (negative elongation factor C/D [Fistulifera solaris])

HSP 1 Score: 109.4 bits (272), Expect = 4.100e-20
Identity = 131/570 (22.98%), Postives = 229/570 (40.18%), Query Frame = 0
Query:    3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVL-TELLL--------QVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSG----KERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREG---RKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKR------LNTASRRASACQILTVASTALFDGSVDREEAD--ALYQGLREASTLLADEE------MLTWNMSTSSIP-PSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSF-NIIKMKRQALQCFVFLMSRGFVLPVLAFFHQIL-----PEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVC 536
            F++EMM    WR+ L+++ A HK+S +L  YC+Q +S+ GH+ E+   V+  D+++V   +L +EL+L        +   +  V+L  LV  L R CC T+Y + +S E+LR +E   + EV    +G R       L    RK+R + Q LE    + +  +   G+     K R+  +  +  L   Q+E   + +    +      G   RK+L  A+L       +       +LD+ + S +        G                                    ++ HP  + AL++ +F P         L     R  A  +L    T   DG++    +D  AL + + +AS L    E      ML     T + P   L  L      +A G + W        +F +S  F  +   ++ LL+ +  + P     + E     L     + S+  +  +K Q+++  + L+  G +  VL    Q +      ++D +L+R+FV   L  A+PP S  F R     L+      A++S+      + L R +   C
Sbjct:  328 FLEEMMDSSRWRKLLIDLSAVHKDSAVL-IYCLQAISKRGHHREIVKRVNQSDHFAVFNAMLQSELILIGNVSVSAESDISSAVELDDLVDDLVRACCSTSYTYLYSMEMLRHLETRAL-EVAENNKGSR-------LNRAIRKWRALSQSLENSMIDPSTPSNASGTSHLFRKRRLDVALTMSELH--QSERRRLKNDPTSNEKNVVNGNGTRKQLETALLSFLRRHSVGMQLDDAVLDSLLPSGIDITSFADTGR----------------------------------LFVEHPVAIKALLEHLFKPGSTRVVAPVLRNKCARLLAFAVLAAEKTTGEDGNMADYYSDEVALTRMIVQASQLCEQLETMVSFLMLLDETKTGTSPGEKLCSLALNCAAIAQGVVIWAEAFTHGTDFASSPAFPTISVSILSLLRTISMKHPFTRKRVIEVAVNFLGHSNQDISYQKVTTIKEQSIRLLIMLLLEGEIPDVLGKLSQKMEQHGSSDLDASLIRYFVSGVLECARPPVSSEFVRCFGLFLKTPKCIDAVRSTYFTESNQELFRAMLLAC 852          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: CBN78708.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 107.8 bits (268), Expect = 1.200e-19
Identity = 148/621 (23.83%), Postives = 217/621 (34.94%), Query Frame = 0
Query:   12 GWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALME-------------------------------------EVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSG---------------------------------------------------KERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTALF-------DGSVDR-----EEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLR---AHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLK--PTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQIL--PEMDHALVRFF-VGVTLVAAQPP---------YSPVFARALASLLREMVVRKAL 516
            GWRRTL+E+   H+ S LL  + ++ LS  G++ E+A ++S  D +SV  GVL + L ++P  D V     +  L R+CC T+Y+  +SQ++L  +E A  E                                      V    E    +G E    +  RK++R+RQEL +  +    RA    S                                                        G  R V                                  +  +   GG       VLLDA VD  V                                      K + P   +RHP L+D L++A+F P  R  +   RA  C IL  AS           DGS         EA  +   +  A T  A  +       TS +  SL+G LR    HP+V++G L W+        F ++  F     V ++L      E P   P  FE LK +L  +  P        K+K+  L     L+ +G++LPV  +  ++   P +D AL+ FF V +  VA   P         YSP F  A+A L+    VR+AL
Sbjct:  476 GWRRTLIELAREHRASALL-RFVLKQLSDMGYHREIASVISETDLFSVFNGVLKDALARIPADDEVQATEALADLKRMCCSTSYMFMYSQQLLINLERAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTRKEADGRDGGETGRNSAARKYKRLRQELAKHMYAVGGRADNNSSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFLRGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSLLGQAGGGGARRAGVLLDA-VDGLV-------SAFGLKPAVRVAVIGAAAVAVELQAAESEQPKRRPPAYLVRHPTLMDILLEALFHPAHRCPSEDLRAGCCAILAYASCVEVPPLDTNNDGSSSNGGSLGGEAIEVIDLVELAETSHALLQAAGECFETSQL-ASLQGRLRPFAEHPLVSLGVLKWVHAQASTESFVSTPSFLSYAPVFLKLCGQAADEHPPQRPEAFEILKLMLNARTAPDTPPAAKAKLKQHILLRMAELVVKGYMLPVFEYLRKLAAGPGLDPALIGFFMVKIVGVAIPRPVARGGNANSYSPAFLNAMAGLMGVPRVRQAL 1086          
The following BLAST results are available for this feature:
BLAST of NO08G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008608976.19.700e-3025.18hypothetical protein SDRG_05059 [Saprolegnia dicli... [more]
CCA14051.11.600e-2723.16negative elongation factor putative [Albugo laibac... [more]
XP_008871271.16.100e-2429.82hypothetical protein H310_07637 [Aphanomyces invad... [more]
XP_008871272.16.100e-2429.82hypothetical protein, variant 1 [Aphanomyces invad... [more]
XP_009831294.16.800e-2329.53hypothetical protein H257_07454 [Aphanomyces astac... [more]
CCI44529.12.200e-2132.51unnamed protein product [Albugo candida][more]
OQR84623.13.700e-2131.00negative elongation factor [Achlya hypogyna][more]
KUF79835.12.400e-2030.80Negative elongation factor D [Phytophthora nicotia... [more]
GAX21063.14.100e-2022.98negative elongation factor C/D [Fistulifera solari... [more]
CBN78708.11.200e-1923.83conserved unknown protein [Ectocarpus siliculosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02960.1NO08G02960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100001g204gene3773Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02960.1NO08G02960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02960 ID=NO08G02960|Name=NO08G02960|organism=Nannochloropsis oceanica|type=gene|length=1863bp
ATGAATTTTATCGATGAGATGATGACTTGGAAGGGGTGGAGACGGACGTT
GATGGAGATTTTTGCGGCACACAAAGAGAGCAAGCTGCTGGGAGGGTACT
GCATGCAGCATTTGAGCAGGGCGGGCCATAACACAGAGATGGCGGACTTG
GTGAGCGTGGATGACTATTGGAGTGTCGCGAGGGGGGTCTTGACCGAATT
GTTGTTACAAGTGCCTTGGGCGGATCACGTGGATTTGGGGAGGTTGGTGG
GCACTCTGACGCGAATATGCTGCGGGACGGCGTATTTACATTCGTTCAGT
CAGGAGGTCCTGAGGGAGGTGGAGGTGGCGTTGATGGAGGAAGTGGGGAG
GGAAGGCGAGGGAGGGAGGGAAGAAGGGAGGGAGCAGAGTTTGGTGGCGA
TGACGAGGAAGTTCCGGCGGATTCGGCAGGAGTTGGAGAGGGGGAGCTGG
GAAGCGGCGGAAAGGGCGGGTGGAGGGGGGAGTGGGAAGGAGAGGGTAGG
TAGAAGTCGGTTCGTGCATCGATTGAGTGCGTGGCAGGCAGAGGCAGCGC
CAGTGAATTCGGCAGAGAAAGGGGACCCGATGAAAGCGAGGGAGGGAAGG
AAAAGATTGCTGGGAGCAATATTGGACGTGTTCAGTGAGGGGGGATTGTC
GGACCACACATTGGCAGTATTGCTTGATGCGTATGTCGACTCATCCGTTT
TGTTCAAGGAGAGAAAGAAGGAGGGGGAAGGGAAGGAGGACAAGGAAGGG
GAGGAGGGTAAGTGGGAGGACGGTGACGAAAACGACGATGACGACGATGA
TGATGGGCTTGCCAAGGTGAAGGGTCCACTGGCCTACCTCCGCCATCCTC
AACTTCTCGATGCGTTGGTCAAAGCCATTTTTGACCCAAAAAAGAGGCTG
AACACTGCCTCTCGCCGAGCCTCGGCCTGCCAGATCTTGACCGTGGCAAG
CACGGCGTTGTTTGACGGCAGTGTGGACCGCGAGGAGGCTGATGCCCTTT
ACCAGGGCCTGAGGGAAGCGTCGACCTTACTGGCAGACGAAGAGATGCTG
ACGTGGAACATGAGTACGTCCAGCATACCCCCTTCCTTGAAAGGCCTGTT
GAGAGCCCACCCTGTGGTGGCCATGGGTTTCTTGCATTGGTTAAGGGTCA
CGATCCAAGACCCGGAGTTTCACAACTCGCGGCAATTCAACGAGGTGATG
AGAGTGCTCATGCGCTTATTGCAATTTTTGGTGAGTGAGCGACCATTGCA
CCACCCGGCGATTTTCGAGGCCCTAAAGGCGCTGTTGACCTTGAAGCCGA
CAGAAAGCTCGTTCAATATCATCAAGATGAAGAGGCAAGCCTTGCAGTGT
TTTGTGTTTCTGATGTCTCGGGGCTTTGTATTGCCGGTGCTGGCGTTCTT
CCATCAGATCCTGCCGGAGATGGATCATGCATTGGTGAGGTTTTTTGTGG
GTGTGACGCTGGTGGCGGCGCAACCCCCTTATTCGCCGGTGTTTGCTCGG
GCGCTTGCATCCTTGTTGAGGGAGATGGTTGTGAGAAAGGCATTGAAATC
AAGTTTGGATGACGGGCATCAGGAGGCTTTGCTCAGGTTTATTGAGACGG
TGTGTGCGGAGGAGGGGGATGCGGAGGAAGAAAGGGGGGGGAAAGGGGAG
GAGGAGAGAGAGGAGAAGGAATTGTCGCCGGTGAAGAAGAAAGGAGGAGA
AGCAGATGGAGAGGAAGAAGTAGAAGGAGGAGGAGCGGCAGCCGCAGTAG
CAGCAAATTTGTTGGACCCGGCAATGAGAAAGGGCCTGAGGTTGGTGTAT
TCCCACATGTTGAAAAAAGAGAAGAGGAAAAGGAGACGGATGAATGGGGA
GGGCGAAGGATGA
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protein sequence of NO08G02960.1

>NO08G02960.1-protein ID=NO08G02960.1-protein|Name=NO08G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=621bp
MNFIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADL
VSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFS
QEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSW
EAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGR
KRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGEGKEDKEG
EEGKWEDGDENDDDDDDDGLAKVKGPLAYLRHPQLLDALVKAIFDPKKRL
NTASRRASACQILTVASTALFDGSVDREEADALYQGLREASTLLADEEML
TWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVM
RVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQC
FVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFAR
ALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAEEGDAEEERGGKGE
EEREEKELSPVKKKGGEADGEEEVEGGGAAAAVAANLLDPAMRKGLRLVY
SHMLKKEKRKRRRMNGEGEG*
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Synonyms
Publications