NO08G02770, NO08G02770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G02770 vs. NCBI_GenBank
Match: EJK73225.1 (hypothetical protein THAOC_05161 [Thalassiosira oceanica]) HSP 1 Score: 119.0 bits (297), Expect = 3.100e-23 Identity = 76/250 (30.40%), Postives = 121/250 (48.40%), Query Frame = 0 Query: 134 RPAYITMGFYGTEEGALAACRNHAP---PVWAEPVKGCVCYMCLDGKNLYKSPLHCRNCGQLVCRKCS-KSRWPQGMLPSTYH---NNERTVRICDACNHLAWNFRRALKDGDWTRVLELC-ASGNVNIWTPFLVESVRE--YPVHCAAEGGNLEVLRWLIDELGCPLY---------ETTDG-----------AAPLV------TQKGDSVLGVAARYQRTAIMRWLVTVKGCKTSEIVCRQLLWGTID 348 + A F +E AA N +P P EP C +C L+K P HCRNCG ++C K S + WP+ M+P T++ N+ V +C +C+ +A F +L G EL + N+N+ TPF+ S E +P+H + GN+++LRWL+D+ CPL+ T+ G ++P V T KG SV+ +AA + I+ +LV+ K E+ ++L G ++ Sbjct: 111 KAAQRAFSFQSEKEARAAAAANSSPVLIPFKNEP----SCQLCDANFTLFKRPRHCRNCGIVICSKFSCMAHWPKRMIPETFYTKKKNQSRVSVCTSCDIIAKRFHHSLICGQLDTAKELFETTRNINLRTPFVARSSSEDFFPIHSSIISGNVKLLRWLVDDQHCPLHMAEHSGVKSGTSGGVLQSLRDPHRQSSPRVFTPTIKTSKGRSVIDLAAETKNMDILTYLVSEKSVSVFELNNKELALGALE 356
BLAST of NO08G02770 vs. NCBI_GenBank
Match: GAX16981.1 (hypothetical protein FisN_5Hh360 [Fistulifera solaris]) HSP 1 Score: 110.5 bits (275), Expect = 1.100e-20 Identity = 72/224 (32.14%), Postives = 105/224 (46.88%), Query Frame = 0 Query: 102 YHVRQRENGAWQATVSLVQPFVRGLFTDPQGMRPAYIT-MGF-YGTEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYHNNER-TVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFL-VESVREYPVHCAAEGGNLEVLRWLIDELGCPLYETTDGAAPLVTQKGDSVLGVAARYQRTAI 322 Y + +R W SL + P P I + F + TE+ A C+++APP + VC +C N + HCRNCG VC KCS RW M+P TY ++ T R+C +C+ L+ F +L G + L +GNVN+ T F + +P+H A GG+ E++RWL+D CP+ TD K S+L V RT + Sbjct: 25 YKIIKRTLAQWSVHRSLTTQNWIATISRPDQQNPEKIRHIQFPFATEKEARTFCKSYAPPKMS---SSTVCEICATHPN--PTVRHCRNCGASVCDKCS-VRWGARMVPKTYSSSAALTQRVCKSCDWLSNAFCMSLLKGRFAEAQTLFQTGNVNLRTSFADIREEAMFPIHTAVMGGSFELVRWLVDVQLCPISVRTD-------PKTGSMLSVQTSAGRTLL 235
BLAST of NO08G02770 vs. NCBI_GenBank
Match: GAX25276.1 (hypothetical protein FisN_5Lh360 [Fistulifera solaris]) HSP 1 Score: 109.4 bits (272), Expect = 2.400e-20 Identity = 69/219 (31.51%), Postives = 106/219 (48.40%), Query Frame = 0 Query: 105 RQRENGAWQATVSLVQPFVRGLFTDPQGMRPAYITMGFYGTEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYHNNER-TVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFL-VESVREYPVHCAAEGGNLEVLRWLIDELGCPLYETTDGAAPLVTQKGDSVLGVAARYQRTAI 322 R + W AT+S + +P+ +R + TE+ A C+++APP + + VC +C N + HCRNCG VC KCS RW M+P TY ++ T R+C +C+ L+ F +L G + L +GNVN+ T F + +P+H A GG+ E+++WL+D CP+ TD K S+L V RT + Sbjct: 39 RSQTTQNWIATISRLDQ------QNPEKLRHIQFP---FATEKEARTFCKSYAPPKMSSSI---VCEICEAHPN--PTVRHCRNCGASVCDKCS-VRWGARMVPKTYSSSAALTQRVCKSCDWLSNAFCMSLLKGRFAEAQTLFQTGNVNLRTSFADIREEAMFPIHTAVMGGSFELVQWLVDVQLCPISVRTD-------PKTGSMLSVQTSAGRTLL 235
BLAST of NO08G02770 vs. NCBI_GenBank
Match: XP_002178764.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49462.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 109.0 bits (271), Expect = 3.200e-20 Identity = 68/216 (31.48%), Postives = 110/216 (50.93%), Query Frame = 0 Query: 143 YGTEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYHNN--ERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFL-VESVREYPVHCAAEGGNLEVLRWLIDELGCPLY----ETTDGAAPLVTQKGDSVLGVAARYQRTAIMRWLVTVKGCKTSEIVCRQLLWGTIDFLLR 352 + +E A C+ ++PP + V +C +C + ++ HCRNCG VC CS +RW M+P TY+ TVR+C +C+ L+ F AL G + VL + +GNVN+ T F + +PVHCA GG+L L+WL++ GCPL T+ A L T ++L +A + + + + G S++ L T++ +L+ Sbjct: 105 FPSEREARRFCKAYSPPRLSTAV---LCQLC---QLTPQAARHCRNCGVTVCDSCS-TRWGIRMVPKTYNPQLLTTTVRVCKSCDWLSNAFCMALLQGRYEDVLTIVETGNVNLRTCFADIHQEAMFPVHCAILGGSLATLQWLVEMQGCPLSVKKDPKTNRALSLQTSASRTLLDLAMKGRPKIDILVYLIQNGLSISDVHDPSLAPKTLEVVLK 313
BLAST of NO08G02770 vs. NCBI_GenBank
Match: XP_002178762.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49460.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 107.5 bits (267), Expect = 9.300e-20 Identity = 67/216 (31.02%), Postives = 109/216 (50.46%), Query Frame = 0 Query: 143 YGTEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYHNN--ERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFL-VESVREYPVHCAAEGGNLEVLRWLIDELGCPLY----ETTDGAAPLVTQKGDSVLGVAARYQRTAIMRWLVTVKGCKTSEIVCRQLLWGTIDFLLR 352 + +E A C+ ++PP + +C +C + ++ HCRNCG VC CS +RW M+P TY+ TVR+C +C+ L+ F AL G + VL + +GNVN+ T F + +PVHCA GG+L L+WL++ GCPL T+ A L T ++L +A + + + + G S++ L T++ +L+ Sbjct: 105 FPSEREARRFCKAYSPPRLS---TAALCQLC---QLTPQAARHCRNCGVTVCDSCS-TRWGIRMVPKTYNPQLLTTTVRVCKSCDWLSNAFCMALLQGRYEDVLTIVETGNVNLRTCFADIHQEAMFPVHCAILGGSLATLQWLVEMQGCPLSVKKDPKTNRALSLQTSASRTLLDLAMKGRPKIDILVYLIQNGLSISDVHDPSLAPKTLEVVLK 313
BLAST of NO08G02770 vs. NCBI_GenBank
Match: CBJ32497.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 100.5 bits (249), Expect = 1.100e-17 Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 0 Query: 178 NLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTY--HNNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFLVESVREYPVHCAAEGGNLEVLRWLIDELGCPLYETTDGAAPLVTQKGDSVLGVAA 315 N S +CRNC ++VC C + W + M+P Y + +R+C CN FR AL G + ++G VN+ P+ V E PVHCAA GGN+ +L WL++ELGC ++ +D P+ + +VLG AA Sbjct: 516 NSSSSDKNCRNCWRVVCDDCIGTFWARNMVPPRYASEGDGFRMRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFH-GELPVHCAAAGGNVGLLSWLVEELGCSIFTDSDKKVPIRDLRSLTVLGAAA 653
BLAST of NO08G02770 vs. NCBI_GenBank
Match: OEU09623.1 (hypothetical protein FRACYDRAFT_277364 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 93.2 bits (230), Expect = 1.800e-15 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 0 Query: 170 CYMCLDGKNLYK-SPLHCRNCGQLVCRKCSKSRWPQGMLPSTY--------HNNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFL-VESVREYPVHCAAEGGNLEVLRWLIDELGCPL 292 C+ C + K P +C NCG +C CS+ RW MLP TY + T R+C +C+ L+ F AL G + + SGN+N+ F + +P+HCA GGNL++++WLID GCP+ Sbjct: 94 CFRCSVKFSTSKCKPCNCNNCGVQICDGCSR-RWGVRMLPKTYLITPNDTNIGSALTARVCKSCDWLSNAFCMALLQGQHNNAVLIHVSGNINLRCCFADIHKEAMFPIHCAVMGGNLDLVKWLIDAHGCPI 224
BLAST of NO08G02770 vs. NCBI_GenBank
Match: XP_002178989.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49687.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 84.0 bits (206), Expect = 1.100e-12 Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 0 Query: 231 FRRALKDGDWTRVLELCASGNVNIWTPF-LVESVREYPVHCAAEGGNLEVLRWLIDELGCPLY------ETTDGA---APLVTQKGDSVLGVAARYQRTAIMRWLVTVKGCKTSE 336 FR AL DGD + + L A+GN+NI PF V+ YPVH G +L +LRWL+DE CP+ T DG +VT KG S+LG+A I+R+LV KG +E Sbjct: 203 FRLALLDGDQDKAVALYATGNINIVCPFGNVKGELFYPVHACVLGESLSILRWLVDENCCPIKSVRVNGRTKDGICNYTAIVTSKGRSLLGIAMENNLIPIVRYLVVEKGLSLAE 317
BLAST of NO08G02770 vs. NCBI_GenBank
Match: XP_002178992.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49690.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 82.4 bits (202), Expect = 3.200e-12 Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = 0 Query: 231 FRRALKDGDWTRVLELCASGNVNIWTPF-LVESVREYPVHCAAEGGNLEVLRWLIDELGCPLY------ETTDGA---APLVTQKGDSVLGVAARYQRTAIMRWLVTVKGCKTSE 336 FR AL +GD + + L A+GN+NI PF V+ YPVH G +L +LRWL+DE CP+ T DG +VT KG S+LG+A I+R+LV KG +E Sbjct: 637 FRLALLEGDQDKAVALYATGNINIVCPFGNVKGELFYPVHACVLGESLSILRWLVDENCCPIKSVRVNGRTKDGICNYTAIVTSKGRSLLGIAMENNLIPIVRYLVVEKGLSLAE 751 The following BLAST results are available for this feature:
BLAST of NO08G02770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 19
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02770 ID=NO08G02770|Name=NO08G02770|organism=Nannochloropsis oceanica|type=gene|length=1110bpback to top protein sequence of NO08G02770.1 >NO08G02770.1-protein ID=NO08G02770.1-protein|Name=NO08G02770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bpback to top Synonyms
Publications
|