NO08G02660, NO08G02660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G02660 vs. NCBI_GenBank
Match: EWM26704.1 (pseudouridine family [Nannochloropsis gaditana]) HSP 1 Score: 536.6 bits (1381), Expect = 9.900e-149 Identity = 299/517 (57.83%), Postives = 350/517 (67.70%), Query Frame = 0 Query: 34 NGFVSLPCDCGQPSMSSSAQNRKASTNLMAANQPPWKRRGREQKRDAEDELALFEQNLLNHGVVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATAAAGGIKEGPLQDTPIEGQAQETFLAEASDSLVRVDRFLALRLPMQSRSALGDIFDEGLVFVNGIPARKSLKLVEGDKVEIQEHTRAGMSDDIRGEDIPLTVLYEDEHLIAINKAPGMVVHPAPGNRNGTFVNALVYHVARGGGSIETTAGSEGRPGIVHRLDKGTSGVLLAAKTAKAHASLSAAFSERRVNKTYLAISIGNPSTEGAVIDVPIGRHPRDRQRMAVAMKARVPIAYLSSHGRGGVLDHAVEXXXXXXXXXXXXXXXXXXXXTYEGELLMGRGGNSGSTPLLGRTARSTVKTLAFDGRLGVVEVGIETGRTHQIRVHLQHRRNPVLGDDLYGNAQWNARAKRRWGIKRPMLHALRVEVAHPVTGVPLRLVAPVPMDMMSVVSNIWPQTKGKEEEEWXVTAEGRLS 551 +GF+ + S+S Q R +MA +PPW+RRG ++K+D+EDEL + EQ+LLN + T G L+D AQ F+A S+SL+RVDR L RL SRS++ D+ D G V+VNG PARKSLK+VEGD++ +++ ++ EDIPL VLYEDEH+IA+NKAPGMVVHPAPGNRNGTFVNAL+ HVAR GG IE GSEGRPG+VHRLDKGTSGVLLAAKTA+AHA+LS+AF+ERRVNKTYLAISIGNPS++GAVIDVPIGRHPRDRQRMAVAM+AR ++ SS AV T ELLMGRGGNSG+TPL GR ARSTVKTLAFDGRL VVEVGIETGRTHQIRVHLQHRRNPVLGD+LYGNAQWNARA+RRWG+ RPMLHALR+ V HPVTG PLRLVAPVP DM+SV IWPQ KG+E EEW + R S Sbjct: 32 DGFICPRGGMQRLSLSPCPQQRTVFA-MMAGRKPPWQRRGPDKKQDSEDELWVLEQSLLNGSSPRTSAFVPSITPTSKTSSSTPEKTDN-------------TLKDTDGNFGTLRD-EANITAQFMFVANTSESLIRVDRLLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEGRPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQART--SHTSSFPGASYAQDAV----LNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEWWDMVDRRPS 527
BLAST of NO08G02660 vs. NCBI_GenBank
Match: CBN79948.1 (Pseudouridine synthase, RluD [Ectocarpus siliculosus]) HSP 1 Score: 300.8 bits (769), Expect = 9.200e-78 Identity = 175/398 (43.97%), Postives = 226/398 (56.78%), Query Frame = 0 Query: 158 ETFLAEASDSLVRVDRFLALRLPMQSRSALGDIFDEGLVFVNGIPARKSLKLVEGDKVEIQEHTRAGMSDDIRGEDIPLTVLYEDEHLIAINKAPGMVVHPAPGNRNGTFVNALVYHVARGGGSIETTAGSEG--------------RPGIVHRLDKGTSGVLLAAKTAKAHASLSAAFSERRVNKTYLAISIGNPSTEGAVIDVPIGRHPRDRQRMAVAMKARVPIAYLSSHGRGGVLDHAVEXXXXXXXXXXXXXXXXXXXXTYEGELLMGRGGNSGSTPLLGRTARSTVKTLAFDGRLGVVEVGIETGRTHQIRVHLQHRRNPVLGDDLYGNAQWNARAKRRWGIKRPMLHALRVEVAHPVTGVPLRLVAPVPMDMMSVVSNIWPQTKGKEEEEW 542 E E + R+D FL R+P QSRS G + G+V V G A+KS+K+ EG +VE++ +S ++GEDIPL +LYED+ +IA++K GMVVHPAPG+ NGTFVNALV+H+ + G +E RPGIVHRLDKGT+GVLLAAK A L+ F++RR++K+YLA+ +GNP + A IDVPIGRHPRDRQRM VA+ P + R A S V T+AFDG+L V EV IETGRTHQIRVHLQHRR PVLGD++YGN WN R ++ G+ RP+LHA +E HP TG + L AP+P D+ +VV I+PQ + E EW Sbjct: 104 EMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKTAKKSVKVEEGQEVEVRFIISPELS--LQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNGLGVAEAAFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPG-KAATIDVPIGRHPRDRQRM-VAVPTIQP-------------------------------------------------------NIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVE-DEHPEW 441
BLAST of NO08G02660 vs. NCBI_GenBank
Match: CEM05541.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 250.4 bits (638), Expect = 1.400e-62 Identity = 172/484 (35.54%), Postives = 232/484 (47.93%), Query Frame = 0 Query: 146 PLQDTPIEGQAQETFLAEASDSLVRVDRFLALRLPMQSRSALGDIFDEGLVFVNGIPARKSLKLVEGDKVEIQ-----EHTRAGMSDD---IRGEDIPLTVLYEDEHLIAINKAPGMVVHPAPGNRNGTFVNALVYHVARGGGSIETTAGS-----------EGRPGIVHRLDKGTSGVLLAAKTAKAHASLSAAFSERRVNKTYLAISIGNPSTEGAVIDVPIGRHPRDRQRMAVAM--KARVPIAYLSSHGRGGVLDHAVEXXXXXXXXXXXXXXXXXXXXTYEGELLMGRGGNSGSTPLLGRTARSTVKTLAFDGRLGVVEVGIETGRTHQIRVHLQHRRNPVLGDDLYGNAQWN---ARAKRRWGIKR------------------------------------------------------------------PMLHALRVEVAHPVTGVPLRLVAPVPMDMMSVVSNIWPQTKGKEEE 540 P + + + T EASD+ VR+DRFL+ P SRS LG + + VFV+G PARKS K+ EG V ++ E + + D + E IPL++LYED+ L+ INK ++VHPAPG+ NGT +NAL++H + +A S RPG+VHRLDKG++GVL+ AKT +A A LS F++R VNKTY+A+S+GNP T+ IDVPI RHP R +M R P++ SS ++G+ + + R A S V+T+A DGRL VVEV I TGRTHQIRVHLQH PVLGD+ YGNA WN ARA R +KR P+LHA R+E+ HP++G +R AP+P D+ V I P+ G+ E Sbjct: 107 PDESRDLSAEQVHTLAVEASDAGVRLDRFLSDHFPRFSRSYLGQLCQDQKVFVDGRPARKSAKVEEGQTVTVELGGTTEPSSNELLPDEWTLTAEPIPLSILYEDDSLVVINKQADLIVHPAPGSWNGTVINALMHHFHLSLPPLFESAESAVIDSAELLPLRFRPGVVHRLDKGSTGVLVVAKTKQAQAHLSQQFADRLVNKTYVAVSVGNPGTQS--IDVPIARHPTQRHKMTAVRDPSLREPVSKSSS-----------------------------------PVTIVGQSPRVEALLRVARPAESEVRTIATDGRLSVVEVDIRTGRTHQIRVHLQHIGCPVLGDETYGNADWNRRLARALDRQNLKRRGKRGQRAGTIGGIFDEQDGPRTFFGVDDIPPHLRDDGGEAEAVGDETAEADGSEVSPSSGEWHVHPLLHAQRLELTHPMSGEAMRFEAPLPDDLRWVAGKISPRLAGQTSE 553
BLAST of NO08G02660 vs. NCBI_GenBank
Match: XP_002184218.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC44396.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 248.8 bits (634), Expect = 4.100e-62 Identity = 156/371 (42.05%), Postives = 204/371 (54.99%), Query Frame = 0 Query: 170 RVDRFLALRLPMQSRSALGDIFDEGLVFV------NGIPARKSLKLVEGDKVEIQEHTRAGMSDDIRGEDIPLTVLYEDEHLIAINKAPGMVVHPAPGNRNGTFVNALVYHVARGGGSIETTAGSEGRPGIVHRLDKGTSGVLLAAKTAKAHASLSAAFSERRVNKTYLAISIGNPSTEGAVIDVPIGRHPRDRQRMAVAMKARVPIAYLSSHGRGGVLDHAVEXXXXXXXXXXXXXXXXXXXXTYEGELLMGRGGNSGSTPLLGRTARSTVKTLAFDGRLGVVEVGIETGRTHQIRVHLQHRRNPVLGDDLYGNAQWNARAKRRWGIKRPMLHALRVEVAHPVTGVPLRLVAPVPMDMMSVVSNIWPQTK 535 R+D LA P SRS G++ V + N + RKS K+ G ++ I G S +I +D+PL +++EDEH+I INKA MVVHPA GN +GT VNAL Y++A SI RPGIVHRLDKGT+GVL+ AKT++ A+LS F+ R+V KTY+AI++GNP + VID PIGRHP RQRM V VP + ST GR A S V TLAFDG+L +V+V IETGRTHQIRVHLQ R P+ GDD+YG A WN + + I RP+LHA ++E+ HPVTG P+ A + DM + + I+P ++ Sbjct: 2 RIDAVLAALEPEMSRSFCGNLVANKRVSIIQENGDNCLVDRKSFKVEPGQQLIISLPREEGAS-EIIAQDLPLDIIFEDEHMIVINKAANMVVHPAAGNWDGTVVNALAYYLANRSESISF------RPGIVHRLDKGTTGVLVVAKTSQTLATLSNFFAARQVKKTYMAITVGNPG-KHVVIDKPIGRHPLHRQRMRV-----VPDPH-----------------------------------------------QKNST---GRRALSYVDTLAFDGKLSLVQVRIETGRTHQIRVHLQDRHTPIYGDDIYGLADWNKKLSKTHRIVRPLLHAYKLEINHPVTGEPMVFKASLADDMKRITTTIYPDSE 309
BLAST of NO08G02660 vs. NCBI_GenBank
Match: GAX29216.1 (23S rRNA pseudouridine1911/1915/1917 synthase [Fistulifera solaris]) HSP 1 Score: 246.9 bits (629), Expect = 1.600e-61 Identity = 161/392 (41.07%), Postives = 209/392 (53.32%), Query Frame = 0 Query: 170 RVDRFLALRLPMQSRSALGDIFDEGLV---FVNGIPARKSLKLVEGD--KVEIQEHTRAGMSDDIRGEDIPLTVLYEDEHLIAINKAPGMVVHPAPGNRNGTFVNALVYHVARG---------GGSIETTAGSEG------RPGIVHRLDKGTSGVLLAAKTAKAHASLSAAFSERRVNKTYLAISIGNPSTEGAVIDVPIGRHPRDRQRMAVAMKARVPIAYLSSHGRGGVLDHAVEXXXXXXXXXXXXXXXXXXXXTYEGELLMGRGGNSGSTPLLGRTARSTVKTLAFDGRLGVVEVGIETGRTHQIRVHLQHRRNPVLGDDLYGNAQWNARAKRRWGIK-RPMLHALRVEVAHPVTGVPLRLVAPVPMDMMSVVSNIWPQTKGKEEEE 541 R+D LA L +SRS G + EG V + + +KS K+ EG ++++ + +D + E+IPL +LYEDEH+I +NKA GMVVHPA GN GT VNALVY++ GS+ + +E RPGIVHRLDKGT+GVL+ AK + A SLS AF+ R+V KTYLAI++GNP + ID PI RHP RQRM V VP + D ++ S S GR A S V TLAFDG+L VV+V I TGRTHQIRVHLQ R P+ GDD+YG WN R + I+ RP+LHA ++++ HPVTG + AP+ DM V I P+ E E Sbjct: 124 RIDAALAACLANESRSVCGSLVTEGCVQDGVTHEVLNKKSYKVQEGQTLRIDLSQRENKVPTDILVPENIPLDILYEDEHMIVLNKAAGMVVHPAAGNWRGTVVNALVYYLPNSPYGSGEFVTNGSMAANSNNEDGEPVLFRPGIVHRLDKGTTGVLVVAKNSHALTSLSEAFANRQVQKTYLAITVGNPGKQ-VTIDKPIARHPIHRQRMRV-----VPDPHQRDSSGMAPKDRLLQP-------------------------------QSSS----GRRALSFVDTLAFDGQLSVVQVQIATGRTHQIRVHLQDRHTPIYGDDVYGLKDWNDRLFKTQQIRDRPLLHAYKLQIEHPVTGQVMEFRAPLAEDMFRVAKTICPRGDEFEHSE 474
BLAST of NO08G02660 vs. NCBI_GenBank
Match: GAX25575.1 (23S rRNA pseudouridine1911/1915/1917 synthase [Fistulifera solaris]) HSP 1 Score: 245.0 bits (624), Expect = 6.000e-61 Identity = 159/394 (40.36%), Postives = 208/394 (52.79%), Query Frame = 0 Query: 170 RVDRFLALRLPMQSRSALGDIFDEGLV---FVNGIPARKSLKLVEGD--KVEIQEHTRAGMSDDIRGEDIPLTVLYEDEHLIAINKAPGMVVHPAPGNRNGTFVNALVYH-----------VARGGGSIETTAGSEG------RPGIVHRLDKGTSGVLLAAKTAKAHASLSAAFSERRVNKTYLAISIGNPSTEGAVIDVPIGRHPRDRQRMAVAMKARVPIAYLSSHGRGGVLDHAVEXXXXXXXXXXXXXXXXXXXXTYEGELLMGRGGNSGSTPLLGRTARSTVKTLAFDGRLGVVEVGIETGRTHQIRVHLQHRRNPVLGDDLYGNAQWNARAKRRWGIK-RPMLHALRVEVAHPVTGVPLRLVAPVPMDMMSVVSNIWPQTKGKEEEE 541 R+D LA L +SRSA G + EG V + + +KS K+ EG ++ + + +D + E+IPL +LYEDEH+I +NKA GMVVHPA GN GT VNAL Y+ +A G + + + +E RPGIVHRLDKGT+GVL+ AK + A SLS AF+ R+V KTYLAI++GNP + ID PI RHP RQRM V VP + D ++ GR A S V TLAFDG+L VV+V I TGRTHQIRVHLQ R P+ GDD+YG WN R + I+ RP+LHA ++++ HPVTG + AP+ DM+ V I P+ E E Sbjct: 123 RIDAALAACLVNESRSACGSLVTEGCVQDGVTHEVLNKKSYKVQEGQTLRINLSQRDAKVPTDILVPENIPLDILYEDEHMIVLNKAAGMVVHPAAGNWRGTVVNALAYYLPTSPYGSGEFIANGSMTAKNSNNNEDGEPVLFRPGIVHRLDKGTTGVLVVAKNSHALTSLSEAFANRQVQKTYLAITVGNPGKQ-VTIDKPIARHPIHRQRMRV-----VPDPHQRDSSGMAPKDRLLQQSLSS-----------------------------------GRRALSFVDTLAFDGQLSVVQVRIATGRTHQIRVHLQDRHTPIYGDDVYGLKDWNDRLFKTQQIRDRPLLHAYKLQIEHPVTGHVMEFRAPLAEDMLRVAKTICPRGDDFEHSE 475
BLAST of NO08G02660 vs. NCBI_GenBank
Match: SCA62605.1 (Uncharacterized RNA pseudouridine synthase Cpar_0723 [Chlamydiales bacterium SCGC AG-110-P3]) HSP 1 Score: 229.6 bits (584), Expect = 2.600e-56 Identity = 147/372 (39.52%), Postives = 198/372 (53.23%), Query Frame = 0 Query: 159 TFLAEASDSLVRVDRFLALRLP-MQSRSALGDIFDEGLVFVNGIPARKSLKLVEGDKVEIQEHTRAGMSDDIRGEDIPLTVLYEDEHLIAINKAPGMVVHPAPGNRNGTFVNALVYHVARGGGSIETTAGSEGRPGIVHRLDKGTSGVLLAAKTAKAHASLSAAFSERRVNKTYLAISIGNPSTEGAVIDVPIGRHPRDRQRMAVAMKARVPIAYLSSHGRGGVLDHAVEXXXXXXXXXXXXXXXXXXXXTYEGELLMGRGGNSGSTPLLGRTARSTVKTLAFDGRLGVVEVGIETGRTHQIRVHLQHRRNPVLGDDLYGNAQWNARAKRRWGIKRPMLHALRVEVAHPVTGVPLRLVAPVPMDMMSVVSNI 530 TF+ S++ R+D+ L+ R QSRS + LV +NG P +K ++ GD+VE++ + ++ E++PL VLYED+HLI INK+ GMVVHPAPGN GTFVNAL+YH G S + A RPGIVHRLDK TSG L+AAK L FS R++ K Y+A+ +GNP +DVPIGRHP R++MAV + S GR HAV + TLA RL VV++ +ETGRTHQIRVHL+HR P+LGD +YG N R++ R MLHA R+ HP+TG L ++AP+P+DM ++ + Sbjct: 23 TFVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTPEV--NLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHC---GDSFQAEASL--RPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNPG--DGTVDVPIGRHPVHRKQMAV----------IESGGR-----HAV----------------------------------------------THYSTLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMN----RQYSASRQMLHAYRLRFMHPITGEKLDVMAPIPVDMRLQIARV 320
BLAST of NO08G02660 vs. NCBI_GenBank
Match: WP_088205723.1 (RluA family pseudouridine synthase [Chlamydiales bacterium SCGC AG-110-P3]) HSP 1 Score: 229.6 bits (584), Expect = 2.600e-56 Identity = 147/372 (39.52%), Postives = 198/372 (53.23%), Query Frame = 0 Query: 159 TFLAEASDSLVRVDRFLALRLP-MQSRSALGDIFDEGLVFVNGIPARKSLKLVEGDKVEIQEHTRAGMSDDIRGEDIPLTVLYEDEHLIAINKAPGMVVHPAPGNRNGTFVNALVYHVARGGGSIETTAGSEGRPGIVHRLDKGTSGVLLAAKTAKAHASLSAAFSERRVNKTYLAISIGNPSTEGAVIDVPIGRHPRDRQRMAVAMKARVPIAYLSSHGRGGVLDHAVEXXXXXXXXXXXXXXXXXXXXTYEGELLMGRGGNSGSTPLLGRTARSTVKTLAFDGRLGVVEVGIETGRTHQIRVHLQHRRNPVLGDDLYGNAQWNARAKRRWGIKRPMLHALRVEVAHPVTGVPLRLVAPVPMDMMSVVSNI 530 TF+ S++ R+D+ L+ R QSRS + LV +NG P +K ++ GD+VE++ + ++ E++PL VLYED+HLI INK+ GMVVHPAPGN GTFVNAL+YH G S + A RPGIVHRLDK TSG L+AAK L FS R++ K Y+A+ +GNP +DVPIGRHP R++MAV + S GR HAV + TLA RL VV++ +ETGRTHQIRVHL+HR P+LGD +YG N R++ R MLHA R+ HP+TG L ++AP+P+DM ++ + Sbjct: 8 TFVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTPEV--NLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHC---GDSFQAEASL--RPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNPG--DGTVDVPIGRHPVHRKQMAV----------IESGGR-----HAV----------------------------------------------THYSTLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMN----RQYSASRQMLHAYRLRFMHPITGEKLDVMAPIPVDMRLQIARV 305
BLAST of NO08G02660 vs. NCBI_GenBank
Match: OEU13219.1 (pseudouridine synthase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 225.7 bits (574), Expect = 3.800e-55 Identity = 148/373 (39.68%), Postives = 202/373 (54.16%), Query Frame = 0 Query: 170 RVDRFL-ALRLPMQSRSALGDIFDEGLVFV----------NGIPARKSLKLVEGDKVEIQEHTRAGMSDDIRGEDIPLTVLYEDEHLIAINKAPGMVVHPAPGNRNGTFVNALVYHVARGGGSIETTAGSEGRPGIVHRLDKGTSGVLLAAKTAKAHASLSAAFSERRVNKTYLAISIGNPSTEGAVIDVPIGRHPRDRQRMAVAMKARVPIAYLSSHGRGGVLDHAVEXXXXXXXXXXXXXXXXXXXXTYEGELLMGRGGNSGSTPLLGRTARSTVKTLAFDGRLGVVEVGIETGRTHQIRVHLQHRRNPVLGDDLYGNAQWNARAKRRWGIKRPMLHALRVEVAHPVTGVPLRLVAPVPMDMMSVVSNIWP 532 R+D L AL P SRSA G++ V+ + RKS+K+ G + + + + +I ++IPL +LYEDE++I INK GMVVHPA GN GT VNAL Y++A ++ GIVHRLDKGT+G+L+ +KT +A A+LSAAF+ R+V KTYLAI++GNP + VID PIGRHP RQRM V VP + R +SG TP R +K + ++ + +V IETGRTHQIRVHLQ R PV GDD+YG A WN R + GI+RP+LHA +E+ HP+TG + VAP+ DM+++ ++WP Sbjct: 123 RIDAVLAALMDPPMSRSASGNLVTNECVYQIVTTKEGSQDTVLIDRKSIKVDAGATLRV-VLPKNEIPTEIIPQNIPLKILYEDEYMIVINKDAGMVVHPAAGNWEGTVVNALAYYLA-----------NDSPYGIVHRLDKGTTGILVVSKTDEALANLSAAFAARKVKKTYLAITVGNPG-KHVVIDKPIGRHPLHRQRMRV-----VPDPH--------------------------------------------RKNSSGVTP----RERIRIKKM----QMTLAKVRIETGRTHQIRVHLQDRHTPVYGDDVYGIADWNKRLLKNHGIQRPLLHAHTLEIEHPITGEHMVFVAPMAADMITIAESVWP 425
BLAST of NO08G02660 vs. NCBI_GenBank
Match: WP_098037656.1 (RluA family pseudouridine synthase [Estrella lausannensis] >CRX37800.1 RNA pseudouridine synthase [Estrella lausannensis]) HSP 1 Score: 224.2 bits (570), Expect = 1.100e-54 Identity = 148/373 (39.68%), Postives = 199/373 (53.35%), Query Frame = 0 Query: 151 PIEGQAQETFLAEASDSLVRVDRFLALRL-PMQSRSALGDIFDEGLVFVNGIPARKSLKLVEGDKVEIQEHTRAGMSDDIRGEDIPLTVLYEDEHLIAINKAPGMVVHPAPGNRNGTFVNALVYHVARGGGSIETTAGSEGRPGIVHRLDKGTSGVLLAAKTAKAHASLSAAFSERRVNKTYLAISIGNPSTEGAVIDVPIGRHPRDRQRMAVAMKARVPIAYLSSHGRGGVLDHAVEXXXXXXXXXXXXXXXXXXXXTYEGELLMGRGGNSGSTPLLGRTARSTVKTLAFDGRLGVVEVGIETGRTHQIRVHLQHRRNPVLGDDLYGNAQWNARAKRRWGIKRPMLHALRVEVAHPVTGVPLRLVAPVPMDM 523 P G+ E L S++ R+D+ LA R ++SR+ +F EG V VNG+P +K + GD VE+Q + ++ E+IPL +LYEDE LIAI+K PGMVVHPAPGN +GT VNAL++H R E RPGIVHRLDK TSGVLLAAK+ H L FS R+V K YLA+ +GNP +ID PIGR P R++M VLD EG G+ A + +TLA DG++ +V++ ++TGRTHQIRVH+Q + PVLGD LYG+ N ++W +R +LHA R+ HP+T P+ AP+P D+ Sbjct: 4 PEFGEELEEVLIAESEAGERLDKILAGRFKDVKSRTYFQYLFQEGKVSVNGLPVKKQYRPRTGDLVEVQFILTPEL--NLAAENIPLRILYEDESLIAIDKPPGMVVHPAPGNWSGTVVNALLFHCTR---LKEEFQQEHIRPGIVHRLDKETSGVLLAAKSHSMHGKLVDLFSSRQVYKEYLAVCLGNPGR--GIIDKPIGRDPYHRKQMK-------------------VLD--------------------------EG----------------GKRAVTEFETLATDGQVSLVKIILKTGRTHQIRVHMQSKNAPVLGDSLYGSIAVN----KKWKAERQLLHAYRLSFLHPMTKKPITFQAPLPPDL 304 The following BLAST results are available for this feature:
BLAST of NO08G02660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02660 ID=NO08G02660|Name=NO08G02660|organism=Nannochloropsis oceanica|type=gene|length=2372bpback to top protein sequence of NO08G02660.1 >NO08G02660.1-protein ID=NO08G02660.1-protein|Name=NO08G02660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=594bpback to top Synonyms
Publications
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