NO08G02540, NO08G02540 (gene) Nannochloropsis oceanica

Overview
NameNO08G02540
Unique NameNO08G02540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2488
Alignment locationchr8:723931..726418 -

Link to JBrowse

Properties
Property NameValue
DescriptionLow temperature viability protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:723931..726418 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007307LTV
Homology
BLAST of NO08G02540 vs. NCBI_GenBank
Match: EWM26617.1 (Low temperature viability protein [Nannochloropsis gaditana])

HSP 1 Score: 500.0 bits (1286), Expect = 1.100e-137
Identity = 331/635 (52.13%), Postives = 389/635 (61.26%), Query Frame = 0
Query:   47 GKIKKRFIDPVNSQHFHLVHRSQRDVKCDDLEAPQYVLLPGRRGNAAARAQTGDDSKDSDEEAGESSKKMRWRDHVNELGLPNDGYDYGRHLKTMGGGRFIAASGEVGSALPGDGIFELPEDPEHWRKARTGQGSRDE-----EG-----QKLLKPVVDAITLSADCMDEDMEEALFGSDGDEGAEEEGGVGGMFEELNDDFILQAGRE----LDSE-----GXXXXXXXDFEAHMAMLIAKSEKSLGWAPARGWEDGELEKLQQLIPHKDLEGYDTDEVXXXXXXXXXXXXXXXXXXXXRPWGA---RAENGSGAGVVSRKDHASMKDDFEDLLAEYNEDDIGELEDPEEAGANTRGFMDVEGGGDGMGGPGCA-----YIEHILDDFLRAKIAEIDEEEARTEVREHAEGRGDTPRRKSVGLFASSGGLAEEEGEEPAEEWEEAGDEEGVTAGGMGEADDMEQFIVKHNYLGDRDGPTPWDCETILSTCSNLDNHPSLIIEE-GRQRKGKKGKSNMYRGKMPGLPE-EERG--PEKAVAMVALSKKSGLPLGVLPMAEKKKVGVEIMNAGSKRDKAETEEEKRLRKAAVKQARREGRAKKKEMAQAFKVVEKVANIHSRSGETAVARSVFQYS 651
            GK +KRFIDP NSQHF++VHRSQRD   DD +A QYVLLPGRRGNAA R +          E  +  K +RWRDH+NELGLPNDGY+YGRHLKTMGGGRFIAASGE+  A    G+++L +          G G +DE     EG     ++ LKPVVDAITLSADCMDE++E ALFGSD ++G E+  GV G   ELNDDFILQAG+E    LD E     G       DFEAHMAMLIAKSEKSLGWAPARGW  GELE +Q++ P + L   D+D+                     +P  A   +  +G G    S K  +  +++FEDLL EY E+DIG LE  EE  +               GGPG        IE ILD+FLRAKIA    +  R    E   GR   P        +S+  + E+E  E AEE  E G            ADD+E FI KH+YLGDRDG  PWDCETILSTCSNLDNHPSLI E+ GRQ +   GK   +  ++P LPE  + G  PE A  MVALSKKSGLPLGVLP+A KK   +   N GSKRDK E   +KR RKAAVK ARREGRA+KKEM QAFK VEKVA + SRSGETAV RSVFQ+S
Sbjct:    2 GKARKRFIDPANSQHFYVVHRSQRDANGDDPKASQYVLLPGRRGNAADRGEA--------TEPSQREKDIRWRDHINELGLPNDGYNYGRHLKTMGGGRFIAASGEIVQARTRGGVYQLAQ----------GSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGC-GELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSEKSLGWAPARGWGHGELESMQRVTPSRHLGFRDSDD----EKTLELSRRSKKMGAAAKPHDATRMKESSGEGGMPKSGKHRSRFEEEFEDLLTEYGEEDIGGLEGTEEEAS-------------ARGGPGAVKEEEDRIEDILDNFLRAKIACTARQGKRDGHSELEVGRKGRPGSSG----SSTLVMEEDEIHEGAEEILETG------------ADDIEDFIAKHDYLGDRDGLVPWDCETILSTCSNLDNHPSLISEQRGRQGRKMHGK---HCSELPRLPEGRDVGLCPENAAEMVALSKKSGLPLGVLPLAPKK--AISNANTGSKRDKDEKVLDKRARKAAVKLARREGRARKKEMTQAFKEVEKVAGLQSRSGETAVNRSVFQFS 579          
BLAST of NO08G02540 vs. NCBI_GenBank
Match: CBN77126.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 169.5 bits (428), Expect = 3.500e-38
Identity = 199/672 (29.61%), Postives = 278/672 (41.37%), Query Frame = 0
Query:   50 KKRFIDPVNSQHFHLVHRSQRDVKCD-DLEAPQYVLLPGRRGNAAARAQTGDDSKDSDEEAGESSKKMRWRDHVNELGLPNDGYDYGRHLKTMGGGRFIAASGEV-----GSALPGDGIFELPEDPEHWRKARTGQGSRDEEGQKLLKPVVDAITLSADCMDEDMEEALFGSDGDEGAEEEGGVGGMFEELNDDFILQAGRELDSEGXXXXXXXDFEAHMAMLIAKSEKSLGWAPARGWEDGELEKLQQLIPHKDLEG----YDTDEVXXXXXXXXXXXXXXXXXXXXRPWGARAENGSGAGVVSRKDHASMKDDFEDLLAEYNEDDIGELEDPEEAGANTRGFMDVEGGGDGMGGPGCAYIEHILDDFLRAKIAEIDEEEARTEVREHAEGRGDTPRRKSVGLFASSGGLAEEEGE---------------------------------------EPAEEWEEAGDEEGVTAG-----------------GMGEADDMEQFIVKHN-YLGDRDGPTPWDCETILSTCSNLDNHPSLIIEEGRQRKGKKGKSNMYRGKMPGLPEEERGPEKAVAMVALSKKSGLPLGVLPMAEKKKVGVEIM----NAGSKRDKAETEEEKRLRKAAVKQARREGRAKKKEMAQAFKVVEKVANIHSRSGETAVARSVFQYS 651
            KK+FID   S  FH+VHRSQ+D   + + EA ++VL+P         ++  D+ K + +  G+       RDH+N LGLPNDGYDY +HLK+MGGG F++ +G+V     G++    G    P  PE   +A     + D +        ++A+T+S   MD DM  AL     D G E+      M   L+DDF++QA       G       DF+AH+A L+  S K  G       +D + + L +L    D E      D   +                       GA A  G   G  + +D A +   FE  LA Y+ D+ GELE+ ++     +G  D+E            Y    +DDFL A     +E+   TE  +        P ++S+                                                      E A +   +G   G   G                       DME     HN YL ++     WDCETI+ST SNLDNHPS++   G  RK K G++     + P       G    V  VALS K+GLPLGVLP       G+  +    N G KRD  ET EEKR RKA +K  +R+ R +KK +  AF    KV +    + E    RSVF YS
Sbjct:    4 KKKFIDKKESTTFHVVHRSQQDKANEGEEEASEFVLIP---SGPPRDSRPQDERKAAGKGKGKGGVAGAERDHINALGLPNDGYDYDQHLKSMGGGTFVSKTGKVQHFAEGNSQGARGGGAKPAIPE---EALPSGETLDRQ--------LEAVTISEKVMDGDMRRALAAGLADVGEEDWDDESNM---LDDDFVVQAA------GAGEDGGFDFDAHVARLMEASAKETGLRQRSRDDDLQTKGLVRLRRDSDSESDXXXXDVATLDGGAGSDDSGEIDDALLEGLDISGAAAAGGGVPGEGTEEDRAVLDSQFEATLAAYDSDEWGELEEDDD---RVQGRWDLEQHD---------YANTCMDDFLAA-----NEDARWTEGVQRL-----PPDQRSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAAKTATSGPRLGKLRGFGAXXXXXXXXXXXXXXXXXXLHDMEH----HNEYLREKPA-EQWDCETIVSTYSNLDNHPSVL---GTGRKAKPGRAR----RSPVAEGVGGGDASTVQQVALSAKTGLPLGVLPERTYNDTGMVSLIAGKNKGEKRDTEETAEEKRRRKAQIKLNKRDKRVQKKNVKTAFTSEAKVISHALANPEAPQNRSVFSYS 618          
BLAST of NO08G02540 vs. NCBI_GenBank
Match: GAX19944.1 (protein LTV1 [Fistulifera solaris])

HSP 1 Score: 148.3 bits (373), Expect = 8.400e-32
Identity = 183/629 (29.09%), Postives = 269/629 (42.77%), Query Frame = 0
Query:   51 KRFIDPVNSQHFHLVHRSQRDVKCD------DLEAPQYVLLPGRRGNAAARAQTGDDSKDSDEEAGESSKKMRWRDHVNELGLPNDGYDYGRHLKTM-GGGRFIAASGEVGSA-LPGDGIFELPEDPEHWRKARTGQGSRDEEGQKLLKPVVDAITLSADCMDEDMEEALFGSDGDEGAEEEGGVGGMFEELNDDFILQAGRELDSEGXXXXXXXDFEAHMAMLIAKS------EKSLGWAPARGWEDGE-LEKLQQLIPHKDLEGYDTDEVXXXXXXXXXXXXXXXXXXXXRPWGARAENGSGAGVVSRKDHASMKDDFEDLLAEYNEDDIGELEDPEEAGANTRGFMDVEGGGDGMGGPGCAYIEHILDDFLRAKIAEIDEEEARTEVREHAEGRGDTPRRKSVGLFASSGG----------LAEEEGEEPAEEWEEAGDEEGVTAGGMGEADDMEQFIVK-HNYLGDRDGPTPWDCETILSTCSNLDNHPSLIIEEGRQRKGKKGKSNMYRGKMPGLPEEERGPEKAVAMVALSKKSGLPLGVL---PMAEKKKVGVEIMNAGSKRDKAETEEEKRLRKAAVKQARREGRAKKKEMAQAFKVVEKVANIHSRSGETAVARSVFQYS 651
            K F+D   S  +HL+HRSQRDV  D      DL A   VL P     A          +D       SS    WR  + + GL  +  D  R LK + G G F+  +G +G A  P D    L ED       R                  ++I L+ADCMDED+ +ALFG D DE           FEELNDDF+L A +E   E        D++ H+  L+AK+      + ++    A G +D +    ++ L  + D + +D +                             +N   A  +S ++   + + FE  L EY+ DD+G+  D E  G  TR               G A  E  LD+FL       +E+E +  +    E  G    R   G  A  GG          L   E +EP     +   E   T     +    E+ ++   +Y  +R+   PWDCE++LST SNL N+P  I  + R++K    KSN     +  L E+E      V  + LS+K+GLPLGVL   P+ +K    +  +N G  R+K E+ EEK+ RK A+K+ R+  R +KK  A+ FK   +   +     + A  ++VF+YS
Sbjct:    5 KPFVDKKKSSTYHLLHRSQRDVASDILLQEGDLAAAGMVLWPSENNLATTNEAVLSSERD-------SSIMSTWRKRLEDAGLLEE--DPERFLKPITGTGTFLNTAGRIGDARAPNDARALLKEDDTILEVERQ----------------FNSIPLTADCMDEDIAQALFG-DFDENE---------FEELNDDFVLDAAQE--PEDGETHDVFDYDEHINRLMAKAKLERRGDPAIPGTHAWGKQDNQFFSGMKPLHENDDEDSWDNE---------------------------FGKNMGVAPSLSPEEEKVLCEQFEATLLEYDSDDLGDCPDEEIGG--TRPL------------EGDAQFEATLDEFL-------NEKEDQVFMIGKREYLGGIKERGGSGFSALLGGRMVHAKYLNDLNPAEDDEPPTNVNQLLMEAQETLNRPPQQPPAEEILIDGKSYFSERE-RNPWDCESVLSTYSNLANNPVTIGPKVRRKK----KSNT---SVASLQEDE-----PVQHILLSQKTGLPLGVLPSRPVIDKFDETINSVNRGEARNKKESNEEKKTRKQAIKRERQMARIQKKATAEVFKEEFQKRAVDYGVDDVA-GKTVFRYS 534          
BLAST of NO08G02540 vs. NCBI_GenBank
Match: OQS06644.1 (hypothetical protein THRCLA_01317 [Thraustotheca clavata])

HSP 1 Score: 146.4 bits (368), Expect = 3.200e-31
Identity = 169/581 (29.09%), Postives = 258/581 (44.41%), Query Frame = 0
Query:   43 AHHRGKIKKRFIDPVNSQHFHLVHRSQRDVKCDDLEAPQYVLLPGRRG-NAAARAQTGDDSKDSDEEAGESSKKMRW-----RDHVNELGLPNDGYDYGRHLKTMGGGRFIAASG--EVGSALPGDGIFELPEDPEHWRKARTGQGSRDEEGQKLLKPVVDAITLSADCMDEDMEEALFGSDGDEGAEEEGGVGGMFEELNDDFILQAGRELDSEGXXXXXXXDFEAHMAMLIAKSEKSLGWAPARGWEDGELEKLQQLIPHKDLEGYDTDEVXXXXXXXXXXXXXXXXXXXXRPWGARAENGSGAGVVSRKDHASMKDD-FEDLL-AEYNEDDIGELEDPEEAGANTRGFMDVEGGGDGMGGPGCAYIEHILDDFLRAKIAEIDEEEARTEVREHAEGRGDTPRRKSVGLFASSGGLAEEEGEEPAEEWEEAGDEEGVTAGGMGEADDMEQFIVKHNYLGDRDGPTPWDCETILSTCSNLDNHPSLIIEEGRQRKGKKGKSNMYRGKMPGLPEEERGPEKAVAMVALSKKSGLPLGVLPMAEK-KKVGVEIMNAGSK-----RDKAETEEEKRLRKAAVK 608
            AH     KK FI+   +QHFH+VHRSQRD   +D  A +YVLL   +  +        DD    D     + K++++     +D VNELG+ NDGYDY +H+K +G G F +A G  + G++L    +  LP++            S   E +++L    +AIT++ D MDED+ EAL   +              FEELNDDF++QA  E + +        D++AH+A L+A +             DG        IP K    +  DE                   XX                S+ D   + D+ FE +L  EY++D +GEL++ E     TRG + +EG            +  I++DF+  +   +D           +EGR   P R       +   L E   E  AE  +   +EE V    M +  ++  ++     + D+     WDCETI+ST SNLDNHP+L + E R++K KK   N                      + LS K+G+PL + P++E+ +     ++N GS      R++ ET+EEK+ RK   K
Sbjct:  149 AHPFSGKKKAFINKKEAQHFHVVHRSQRDPLINDPTASKYVLLSTTKEIDGTQPIYESDDDDLPDLVESNAPKQVKFGNVVAKDLVNELGMVNDGYDYSKHMKEIGRGHFYSAGGNFDEGASLLSKRVV-LPDEV---------LASHTSEAERML----EAITITEDVMDEDLREALTNEEA-------------FEELNDDFVIQAAEE-NEDDKNGNDGFDYDAHIAKLMAAA-------------DG--------IP-KYAGHFSEDE------------------EXXXXXXXXXXXXXXXXXXSKDDAQRVLDEAFEKMLEEEYDDDMVGELDEEE-----TRGKLVLEGD----------LLNSIVEDFVHIQQEVMD-----------SEGRIGNPLR-------TGNHLKEVFAEIEAENAQYESEEEMVEMANMDDVAELNPYLAPR--VDDQ-----WDCETIVSTYSNLDNHPTL-LREPREKKSKKKNPN---------------------HIILSSKTGMPLNITPISEEVESQDDAVINVGSVAPQLIRNRRETKEEKKERKMLAK 599          
BLAST of NO08G02540 vs. NCBI_GenBank
Match: XP_002181571.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46785.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 141.0 bits (354), Expect = 1.300e-29
Identity = 181/629 (28.78%), Postives = 272/629 (43.24%), Query Frame = 0
Query:   46 RGKIKKRFIDPVNSQHFHLVHRSQRDVKCDDLE-----APQYVLLPGRRGNAAARAQTGDDSKDSDEEA----GESSKKMRWRDHVNELGLPNDGYDYGRHLKTM-GGGRFIAASGEVGSALPGDGIFELPEDPEHWRKARTGQGSRDEEGQKLLKPVVDAITLSADCMDEDMEEALFGSDGDEGAEEEGGVGGMFEELNDDFILQAGRELDSEGXXXXXXXDFEAHMAMLIAKSEKSLGWAPARGWEDGELEKLQQLIPHKDLEGYDTDEVXXXXXXXXXXXXXXXXXXXXRPWGARAENGSGAGVVSR---KDHASMKDDFEDLLAEYNEDDIGELEDPEEAGANTRGFMDVEGGGDGMGGPGCAYIEHILDDFLRAKIAEIDEEEARTEVREHAEGRGDTPRRKSVGLFASSGGLAEEEGEEPAEEWEEAGDEEGV----------TAGGMGEADDMEQFIVKHNYLGDRDGPTPWDCETILSTCSNLDNHPSLIIEEGRQRKGKKGKSNMYRGKMPGLPEEERGPEKAVAMVALSKKSGLPLGV-LPMAEKKKVGVEIMNAGSKRDKAETEEEKRLRKAAVKQARREGRAKKKEMAQAFKVVEKVANIHSRSGETAVARSVFQYS 651
            + K  K +ID  N+  +HL+HRSQRDV  D LE     A   VL P    N           K +DE+     G+S+K   WR  +  LGL ++  D  ++LK + G G F+ ++G VG+AL                 A +     +E+G   +    D+I LSA+ MDE++  AL+G D DE            E+LNDDF+L A +E + E        D++ H+  L+ K+ +             E E +  L P K +   D +                        + A A   +  GVVS     +  ++ + FE+ L EY+ D++G+  + E       G  ++EG          A +E  LDDFL  K  EI  +             G+  R K VG    S  + ++     A E    G  E V           A  + +    E  I   +Y  +R    PWDCE+ILST SN+DN+P + IE  R+RK KK K+          P+   G E     + LS K+GLP+   +   E     +  +N G  R K E+ EEKR RK A+K+ R   R +KK+  + F+   +  +I   S + A  +SVF+Y+
Sbjct:    3 KSKSAKPYIDKKNASTYHLLHRSQRDVAGDVLEEGDTSAAGMVLWPSPENN-----------KQTDEKVLISEGQSNKMSEWRQKLESLGLLDE--DPDKYLKPITGTGTFLDSNGHVGNAL-----------------AHSRSKPLEEDGLLEVNRQFDSIPLSAELMDEEIAAALYG-DFDESD---------MEQLNDDFVLDAAKEPEGE---EAGSFDYDEHIRALMEKARR-------------EREDVVSL-PQKHVGNNDQNFFAKLKPLAENDEDDNESFADIGSYYAEATIATTPGVVSALNPDEERALCEKFEEALLEYDSDEMGDCPEYE-----IHGTRELEGD---------AQVEAALDDFLLDKEDEIFMQ-------------GNRYREKKVGGSGFSALVGKQMVPASALEGLPIGCTESVEETLRTARETLAQPLQKPPTEEVLIDGKSYFSER-LRNPWDCESILSTYSNMDNNP-VTIEATRRRKKKKNKAYS--------PQTAPGEE-----IRLSTKTGLPISSRIDEDEDVDESILSVNRGIARQKGESAEEKRCRKNAIKREREMARIQKKKTREIFQEEFQKRSIDVMSDDIA-GKSVFRYA 531          
BLAST of NO08G02540 vs. NCBI_GenBank
Match: XP_008879344.1 (hypothetical protein H310_13572 [Aphanomyces invadans] >ETV92047.1 hypothetical protein H310_13572 [Aphanomyces invadans])

HSP 1 Score: 140.2 bits (352), Expect = 2.300e-29
Identity = 185/559 (33.09%), Postives = 258/559 (46.15%), Query Frame = 0
Query:   47 GKIKKRFIDPVNSQHFHLVHRSQRDVKCDDLEAPQYVLLPGRRGNAAARAQTGDDSKDSD------EEAGESSKKMRW-----RDHVNELGLPNDGYDYGRHLKTMGGGRFIAASG--EVGSALPGDGIFELPEDPEHWRKARTGQGSRDEEGQKLLKPVVDAITLSADCMDEDMEEALFGSDGDEGAEEEGGVGGMFEELNDDFILQAGREL--DSEG-XXXXXXXDFEAHMAMLIAKSEKSLGWAPARGWEDGELEKLQQLIPHKDLEGYDTDEVXXXXXXXXXXXXXXXXXXXXRPWGARAENGSGAGVVSRKDHASMKDDFEDLLA-EYNEDDIGELEDPEEAGANTRGFMDVEGGGDGMGGPGCAYIEHILDDFLRAKIAEIDEEEARTEVREHAEGRGDTPRRKSVGLFASSGGLAEEEGEEPAEEWEEAGDEEGVTAGGMGEADDMEQ-----FIVKHNYLGDRDGPTPWDCETILSTCSNLDNHPSLIIEEGRQRKGKKGKSNMYRGKMPGLPEEERGPEKAVAMVALSKKSGLPLGVLPMAEKKKVGVEI 584
            GK  K FI+   +QHFH+VHRSQRD   +D EA ++VLL  +   +        DS DSD      + A  S K +R+     RD VNELG+ NDGYDY +H+K MG G F +A G  + G+ L    +  LP++            S +E  + L     DAITL+ D MDED+ EAL   +              FEEL DDF+LQA +EL  D++G        D++AH+A L+A +E                      IP     G+ +D  XXXXXXXXXXXXXXXXXXXX                      ++ D FE L+A EY+++ +GELE+ E     TRG + +EG            ++ I+DD++  +      +E   +     EGR   P R        SG   +E   E A    E  D + V          +EQ      +  + YL  R     WDCETI+ST SNLDNHP++I E  +  K K         K   + E         + + LS K+G+PL ++P+     +  E+
Sbjct:    2 GKKSKSFINKKEAQHFHVVHRSQRDPLINDPEASKFVLLSSKPLPSGRNELDAYDSDDSDLPDLVPQVAAPSGKTVRFGNVVARDLVNELGMVNDGYDYSKHMKEMGQGHFYSAGGTYDEGAGLLNKRVV-LPDEV---------MASANEHDRML-----DAITLTEDVMDEDLREALVNDEA-------------FEELTDDFMLQAAQELPDDADGADVAADGFDYDAHIAKLMAAAEG---------------------IP--KYRGHISDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------------QRALDDAFEKLMAEEYDDEQVGELEEDE-----TRGKLVLEGD----------LLDQIVDDYVNIR------QELMAD-----EGRLGNPLR--------SGNRLKEILAECA---VELADSDDVVMKPTDPVPAVEQPADLSDLSSNPYLVQRI-DDQWDCETIVSTYSNLDNHPTVIREPSKAPKKKT--------KAQKIAES--------STIVLSSKTGMPLNIVPLGATAIIPEEV 443          
BLAST of NO08G02540 vs. NCBI_GenBank
Match: XP_012210139.1 (hypothetical protein SPRG_15707 [Saprolegnia parasitica CBS 223.65] >KDO19141.1 hypothetical protein SPRG_15707 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 139.0 bits (349), Expect = 5.100e-29
Identity = 168/543 (30.94%), Postives = 238/543 (43.83%), Query Frame = 0
Query:   50 KKRFIDPVNSQHFHLVHRSQRDVKCDDLEAPQYVLLPGRRGNAAARAQTGDDS-------KDSDEEAGESSKKMRW-----RDHVNELGLPNDGYDYGRHLKTMGGGRFIAASG--EVGSALPGDGIFELPEDPEHWRKARTGQGSRDEEGQKLLKPVVDAITLSADCMDEDMEEALFGSDGDEGAEEEGGVGGMFEELNDDFILQAGRELDSEGXXXXXXXDFEAHMAMLIAKSEKSLGWAPARG-WEDGELEKLQQLIPHKDLEGYDTDEVXXXXXXXXXXXXXXXXXXXXRPWGARAENGSGAGVVSRKDHASMKDDFEDLL-AEYNEDDIGELEDPEEAGANTRGFMDVEGGGDGMGGPGCAYIEHILDDFLRAKIAEIDEEEARTEVREHAEGRGDTPRRKSVGLFASSGGLAEEEGEEPAEEWEEAGDEEGVTAGGMGEADDMEQFIVKHNYLGDRDGPTPWDCETILSTCSNLDNHPSLIIEEGRQRKGKKGKSNMYRGKMPGLPEEERGPEKAVAMVALSKKSGLPLGVLPMAEK 577
            KK FI+   +QHFH+VHRSQRD   +D  A ++VLL   +      +Q   DS          D  A   +K++R+     +D VNELG+ NDGYDY +H++ +G G+F +A G  + G+ L    +  LP+D            S   E +++L    +AITL+ D MDED+ EAL   D              FEELNDDF+LQA  + + E        D+EAH+A L+A ++   G    RG   D E                D DE                XXXXX                           FE L+  EY++++IGEL++ E     TRG + +EG          A +E I+ D++      + EE  +T      EGR   P R    L      LAE   E+   E EE  + E      +   DD+      + YL  R     WDCETI+ST SNLDNHP+L+ E  R+   KK                    +K    + LS K+G+PL + P++E+
Sbjct:    4 KKAFINKKEAQHFHVVHRSQRDPLINDPSASKFVLLSATQAQEYDGSQAPYDSGXXXXXXXXPDLVASAPTKQVRFGNVVAQDLVNELGMVNDGYDYTKHMREIGHGQFYSAGGTYDEGAGLLSKRVV-LPDDV---------LASNTVESERML----EAITLTEDVMDEDLREALTNEDA-------------FEELNDDFMLQAAED-NGEDDGAADGFDYEAHIAKLMAAAD---GIPKYRGNLSDDE----------------DDDE----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEKLMEEEYDDEEIGELDEEE-----TRGELLLEG----------ALLESIVQDYV-----HLQEEVMQT------EGRIGNPLRTGNRL---QEVLAECAAEDALYESEEEAEPE------LANMDDIAH---TNPYLAPR-VEDQWDCETIVSTYSNLDNHPTLLREPRRENPKKK--------------------KKHANHIILSSKTGMPLNITPISEE 424          
BLAST of NO08G02540 vs. NCBI_GenBank
Match: XP_012207026.1 (hypothetical protein SPRG_12132 [Saprolegnia parasitica CBS 223.65] >KDO22292.1 hypothetical protein SPRG_12132 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 116.7 bits (291), Expect = 2.700e-22
Identity = 156/540 (28.89%), Postives = 220/540 (40.74%), Query Frame = 0
Query:   50 KKRFIDPVNSQHFHLVHRSQRDVKCDDLEAPQYVLLPGRRGNAAARAQTGDDSKDS------DEEAGESSKKMRW-----RDHVNELGLPNDGYDYGRHLKTMGGGRFIAASG--EVGSALPGDGIFELPEDPEHWRKARTGQGSRDEEGQKLLKPVVDAITLSADCMDEDMEEALFGSDGDEGAEEEGGVGGMFEELNDDFILQAGRELDSEGXXXXXXXDFEAHMAMLIAKSEKSLGWAPARGWEDGELEKLQQLIPHKDLEGYDTDEVXXXXXXXXXXXXXXXXXXXXRPWGARAENGSGAGVVSRKDHASMKDDFEDLLAEYNEDDIGELEDPEEAGANTRGFMDVEGGGDGMGGPGCAYIEHILDDFLRAKIAEIDEEEARTEVREHAEGRGDTPRRKSVGLFASSGGLAEEEGEEPAEEWEEAGDEEGVTAGGMGEADDMEQFIVKHNYLGDRDGPTPWDCETILSTCSNLDNHPSLIIEEGRQRKGKKGKSNMYRGKMPGLPEEERGPEKAVAMVALSKKSGLPLGVLPMAEK 577
            KK FI+   +QHFH+VHRSQRD   +D  A ++VLL   +      +Q   DS D       D  A   +K++R+     +D VNELG+ NDGYDY +H++ +G G+F +A G  + G+ L    +  LP+D            S   E +++L    +AITL+ D MDED+ EAL   D              FEELNDDF+LQA  + + E        D+EAH+A L+A ++   G    RG                                       XXXXXXX                                                    TRG + +EG          A +E I+ D++      + EE  +T      EGR   P R    L      LAE   E+   E EE  + E      +   DD+      + YL  R     WDCETI+ST SNLDNHP+L+ E  R+   KK K+  +                    + LS K+G+PL + P++E+
Sbjct:    4 KKAFINKKEAQHFHVVHRSQRDPLINDPTASKFVLLSATQAQEFDGSQAPYDSGDDXXXXMPDLVASAPTKQVRFGNVVAQDLVNELGMVNDGYDYTKHMREIGHGQFYSAGGTYDEGAGLLSKRVV-LPDDV---------LASNTVESERML----EAITLTEDVMDEDLREALTNEDA-------------FEELNDDFMLQAAED-NGEDDGAADGFDYEAHIAKLMAAAD---GIPKYRG-----------------------------------NLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRGELLLEG----------ALLESIVQDYV-----HLQEEVMQT------EGRIGNPLRTGNRL---QEVLAECAAEDALYESEEEAEPE------LANMDDIAH---TNPYLAPR-VEDQWDCETIVSTYSNLDNHPTLLREPRRENPKKKKKNANH--------------------IILSSKTGMPLNITPISEE 423          
BLAST of NO08G02540 vs. NCBI_GenBank
Match: XP_009846029.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV64489.1 hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 116.3 bits (290), Expect = 3.500e-22
Identity = 157/564 (27.84%), Postives = 224/564 (39.72%), Query Frame = 0
Query:   47 GKIKKRFIDPVNSQHFHLVHRSQRDVKCDDLEAPQYVLLPGRRGNAAARAQTGDDSKDSD--------EEAGESSKKMRW-----RDHVNELGLPNDGYDYGRHLKTMGGGRFIAASG--EVGSALPGDGIFELPEDPEHWRKARTGQGSRDEEGQKLLKPVVDAITLSADCMDEDMEEALFGSDGDEGAEEEGGVGGMFEELNDDFILQAGREL-----DSEGXXXXXXXDFEAHMAMLIAKSEKSLGWAPARGWEDGELEKLQQLIPHKDLEGYDTDEVXXXXXXXXXXXXXXXXXXXXRPWGARAENGSGAGVVSRKDHASMKDDFEDLLAEYNEDDIGELEDPEEAGANTRGFMDVEGGGDGMGGPGCAYIEHILDDFLRAKIAEIDEEEARTEVREHAEGRGDTPRRKSVGLFASSGGLAEEEGEEPAEEWEEAGDEEGVTAGGMGEADDMEQFIVKHNYLGDRDGPTPWDCETILSTCSNLDNHPSLIIEEGRQRKGKKGKSNMYRGKMPGLPEEERGPEKAVAMVALSKKSGLPLGVLPMAEKKKVGVEIMNAGSKR 591
            GK  K FI+   +QHFH+VHRSQRD   +D  A ++VLL      ++  A    DS DSD          A  ++K +R+      D VNELG+ NDGYDY +H+K MG G F +A G  + G+ L    +  LP+D            S +E  + L     DAITL+ D MDED+ EAL   +              FEEL DDF+LQA  +L     D          D++AH+A L+A +E   G    RG                     D DE                         +                                  +GELE+ +     TRG + +EG          A +E I+DD++  +      +E   +     EGR   P R        +G   ++   E AE  E+    +        E  D+   +  + YL  R     WDCETI+ST SNLDNHP++I E  +  K KK K+                     + + LS K+G+PL ++P+     +  E +   S R
Sbjct:   31 GKKSKAFINKKEAQHFHVVHRSQRDPLINDPSASKFVLL------SSKPAVDDYDSDDSDLPDLVPQSATAPPAAKAVRFGNVVAHDLVNELGMVNDGYDYSKHMKEMGQGHFYSAGGTYDEGAGLLNKRVV-LPDDV---------LASANEHDRML-----DAITLTEDVMDEDLREALVNDEA-------------FEELTDDFMLQAAEDLPVEQGDGAAAGGADGFDYDAHIAKLMAAAE---GIPKYRGHLSD-----------------DEDE-------------------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGELEEDD-----TRGKLVLEG----------ALLEQIVDDYVNIR------QELMAD-----EGRLGNPLR--------TGNRLKDILAECAETAEDVAVMKPTDPVPAIEPADLTD-LSANPYLVQR-VEDQWDCETIVSTYSNLDNHPTMIREPSKTSK-KKTKAQKI---------------ALSSTIVLSSKTGMPLNIVPLTATAPIQEEGIEGTSAR 463          
BLAST of NO08G02540 vs. NCBI_GenBank
Match: GAX28624.1 (protein LTV1 [Fistulifera solaris])

HSP 1 Score: 115.9 bits (289), Expect = 4.600e-22
Identity = 174/629 (27.66%), Postives = 262/629 (41.65%), Query Frame = 0
Query:   51 KRFIDPVNSQHFHLVHRSQRDVKCD------DLEAPQYVLLPGRRGNAAARAQTGDDSKDSDEEAGESSKKMRWRDHVNELGLPNDGYDYGRHLKTM-GGGRFIAASGEVGSA-LPGDGIFELPEDPEHWRKARTGQGSRDEEGQKLLKPVVDAITLSADCMDEDMEEALFGSDGDEGAEEEGGVGGMFEELNDDFILQAGRELDSEGXXXXXXXDFEAHMAMLIAKS------EKSLGWAPARGWEDGE-LEKLQQLIPHKDLEGYDTDEVXXXXXXXXXXXXXXXXXXXXRPWGARAENGSGAGVVSRKDHASMKDDFEDLLAEYNEDDIGELEDPEEAGANTRGFMDVEGGGDGMGGPGCAYIEHILDDFLRAKIAEIDEEEARTEVREHAEGRGDTPRRKSVGLFASSGG----------LAEEEGEEPAEEWEEAGDEEGVTAGGMGEADDMEQFIVK-HNYLGDRDGPTPWDCETILSTCSNLDNHPSLIIEEGRQRKGKKGKSNMYRGKMPGLPEEERGPEKAVAMVALSKKSGLPLGVLP---MAEKKKVGVEIMNAGSKRDKAETEEEKRLRKAAVKQARREGRAKKKEMAQAFKVVEKVANIHSRSGETAVARSVFQYS 651
            K F+D   S  +HL+HRSQRDV  D      DL A   VL P           T +++  S E   +SS    WR  + + GL  +  D  R LK + G G F+  +G +G A  P D    L ED       R                  ++I L+ADCMDED+ +ALFG D DE           FEELNDDF+L A +E   E        D++ H+  L+AK+      + ++  A A G +D +    ++ L  + D + +D +                             +N   A  +S ++   + + FE  L EY+ DD+G+  D E  G  TR               G A  E  L++FL  K    ++E      RE+  G  +T      G  A  GG          +   E +EP     +   E   T     +    E+ ++   +Y  +R+   PWDCE++LST SNL N+P  I  + R++K    KSN        L ++E  P   V  + LS+K+GLPLGVLP   + ++    +  +N G  R+K E+                    +KK  A+ FK   +   +     + A  ++VF+YS
Sbjct:    5 KPFVDKKKSSTYHLLHRSQRDVASDILLQEGDLAAAGMVLWPSEN-----NLPTTNEAVLSSER--DSSIMSTWRKRLEDAGLLEE--DPERFLKPITGTGTFLNTAGRIGDARAPNDARALLKEDDTILEVERQ----------------FNSIPLTADCMDEDIAQALFG-DFDENE---------FEELNDDFVLDAAQE--PEDGETQDAFDYDEHINRLMAKAKLERRGDPTIPGAHAWGKQDNQFFSGMKPLHENDDEDSWDNE---------------------------FGKNMGVAPSLSPEEEKVLCEQFEATLLEYDSDDLGDCPDEEIGG--TRPL------------EGDAQFEATLEEFLTEK----EDEVFMKGKREYLGGIKET---GGSGFSALLGGRMVHAKYLNDVNPAEDDEPPTNVNQLLMEAQETLNRPLQQPPAEEILIDGKSYFSERE-RNPWDCESVLSTYSNLANNPVTIGPKVRRKK----KSN-----TSVLSQQEDEP---VQHILLSQKTGLPLGVLPSRTVMDRFDETINSVNRGEARNKEESXXXXXXXXXXXXXXXXXXXIQKKATAEVFKEEFQKRAVDYGVDDVA-GKTVFRYS 534          
The following BLAST results are available for this feature:
BLAST of NO08G02540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26617.11.100e-13752.13Low temperature viability protein [Nannochloropsis... [more]
CBN77126.13.500e-3829.61conserved unknown protein [Ectocarpus siliculosus][more]
GAX19944.18.400e-3229.09protein LTV1 [Fistulifera solaris][more]
OQS06644.13.200e-3129.09hypothetical protein THRCLA_01317 [Thraustotheca c... [more]
XP_002181571.11.300e-2928.78predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_008879344.12.300e-2933.09hypothetical protein H310_13572 [Aphanomyces invad... [more]
XP_012210139.15.100e-2930.94hypothetical protein SPRG_15707 [Saprolegnia paras... [more]
XP_012207026.12.700e-2228.89hypothetical protein SPRG_12132 [Saprolegnia paras... [more]
XP_009846029.13.500e-2227.84hypothetical protein, variant 1 [Aphanomyces astac... [more]
GAX28624.14.600e-2227.66protein LTV1 [Fistulifera solaris][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008782NSK008782Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02540.1NO08G02540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|367074gene_3583Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g160gene3811Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02540.1NO08G02540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02540 ID=NO08G02540|Name=NO08G02540|organism=Nannochloropsis oceanica|type=gene|length=2488bp
ATGTACGCCACAGACATCAAGCTCCGCCCTCGATTAATCAACGTCTCGAA
GCTAGCATCTTCTGCGTCGCTCCGGCTGGATCTTAAGTCAAATGGTACGG
CACAGCATATGACCTCCTCCCTCATTGCCCACCATCGGgtggggatggac
aaagttgctaaaccacatcattactttcgcttctccaccgaccacagGGC
AAAATCAAGAAGCGCTTCATCGACCCTGTAAACTCCCAACACTTCCATCT
GGTGCACCGCAGCCAGCGCGACGTCAAGTGCGACGATCTCGAGGCACCGC
AGTATGTGCTGCTGCCAGGACGGgtacgtacatcctcccctcgacaatgc
ttgatcagcaaatgctgcattttcattgtggtatcctgtcgaatcacgtg
tctactgctcctaagtcaatctaaacctgaacggagtgctcttcgtacta
ttttctattcaggttgcctatccattaggcaagggctccctccagtctca
cactcccaactctgctcctcttctgccagcctgctcgacttttgccacag
aggctcagcatgccccatgtgttctcatctttcttccactaaatgcgccg
aaattttcatgatagctgaccttaaatcctgtcctctcaacctccaccat
ccacacccctcccaaaccaccccctacaagCGCGGCAACGCAGCAGCCCG
CGCCCAAACGGGCGACGACTCCAAAGATAGCGACGAGGAAGCAGGCGAGT
CAAGCAAGAAAATGCGATGGCGAGACCATGTGAACGAGCTGGGCCTTCCT
AATGACGGTTATGACTACGGTAGACATTTGAAGACGATGGGAGGAGGGCG
GTTTATTGCTGCTTCGGGAGAGGTTGGTAGTGCCTTGCCTGGGGATGGCA
TTTTTGAGCTGCCGGAAGACCCGGAGCATTGGAGAAAGGCAAGAACTGGG
CAGGGCTCGAGGGATGAGGAGGGACAGAAGCTGCTGAAGCCGGTAGTGGA
TGCGATTACATTATCAGCCGATTGTATGGACGAGGATATGGAGGAGGCCT
TGTTTGGGAGCGACGGGGACGAGGGGGCCGAGGAGGAGGGAGGAGTGGGG
GGGATGTTCGAAGAGCTGAATGACGATTTTATCTTGCAAGCGGGTCGGGA
ACTGGATTCCGAGGGGGAGGGAGCGGGGGGAGGGTTTGATTTTGAGGCTC
ATATGGCCATGTTGATTGCTAAAAGTGAGAAATCTTTGGGTTGGGCCCCG
GCACGTGGATGGGAGGACGGAGAACTAGAGAAGCTGCAGCAGTTGATTCC
CCACAAGGATTTGGAGGGTTATGACACTGATGAAGTGGACGATGACGAGG
AGGAAGCTGGGGCGAGGAGGAAGAGTGCAGCAGCGATGCGGCGCCATCGA
CCTTGGGGGGCACGGGCCGAGAATGGGTCCGGGGCAGGAGTTGTTTCAAG
AAAGGACCATGCATCCATGAAGGATGATTTTGAAGATTTGCTGGCCGAGT
ATAATGAGGATGACATTGGCGAGCTGGAGGACCCAGAGGAGGCAGGGGCG
AACACGCGGGGATTTATGGATGTTGAAGGAGGAGGGGATGGAATGGGCGG
CCCCGGCTGTGCGTATATTGAGCACATTTTGGATGACTTCTTGAGGGCCA
AGATTGCCGAGATTGATGAGGAGGAGGCACGTACGGAGGTGAGGGAGCAT
GCGGAGGGGCGGGGGGACACTCCGAGGAGGAAGAGTGTTGGGTTGTTCGC
CAGCAGTGGGGGACTGGCGGAAGAGGAGGGAGAGGAACCGGCTGAGGAAT
GGGAGGAGGCAGGGGACGAGGAAGGGGTCACGGCTGGAGGGATGGGTGAG
GCGGACGACATGGAGCAATTCATTGTCAAGCACAACTACCTCGGGgtaag
cgattgcgcggggggtggggaggaaatttaatgtgtgcgacctctccctt
cttgcctctatgtaaaatggctcacacacactcctcttctgccgctttcc
ctttccgctattagGACCGGGATGGCCCTACCCCCTGGGACTGTGAGACC
ATACTCTCCACCTGCTCGAATCTGGACAACCACCCCAGCCTTATCATCGA
GGAAGGGAGGCAACGAAAGGGAAAGAAAGGGAAGAGCAACATGTATCGTG
GTAAGATGCCGGGCCTGCCTGAAGAAGAAAGAGGGCCCGAGAAAGCGGTG
GCCATGGTTGCCCTCTCGAAGAAGAGTGGATTGCCCTTGGGGGTCCTGCC
AATGGCGGAGAAAAAGAAGGTCGGCGTCGAGATCATGAATGCGGGGAGCA
AGCGCGATAAGGCGGAGACGGAAGAGGAGAAGCGGCTTCGAAAAGCCGCT
GTGAAGCAGGCGCGGCGGGAGGGACGGGCAAAAAAGAAGGAAATGGCGCA
AGCATTTAAGGTGGTGGAGAAGGTTGCCAATATCCACTCTCGGAGTGGCG
AGACTGCCGTGGCTCGGAGCGTCTTTCAGTATTCGTAG
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protein sequence of NO08G02540.1

>NO08G02540.1-protein ID=NO08G02540.1-protein|Name=NO08G02540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=651bp
MYATDIKLRPRLINVSKLASSASLRLDLKSNGTAQHMTSSLIAHHRGKIK
KRFIDPVNSQHFHLVHRSQRDVKCDDLEAPQYVLLPGRRGNAAARAQTGD
DSKDSDEEAGESSKKMRWRDHVNELGLPNDGYDYGRHLKTMGGGRFIAAS
GEVGSALPGDGIFELPEDPEHWRKARTGQGSRDEEGQKLLKPVVDAITLS
ADCMDEDMEEALFGSDGDEGAEEEGGVGGMFEELNDDFILQAGRELDSEG
EGAGGGFDFEAHMAMLIAKSEKSLGWAPARGWEDGELEKLQQLIPHKDLE
GYDTDEVDDDEEEAGARRKSAAAMRRHRPWGARAENGSGAGVVSRKDHAS
MKDDFEDLLAEYNEDDIGELEDPEEAGANTRGFMDVEGGGDGMGGPGCAY
IEHILDDFLRAKIAEIDEEEARTEVREHAEGRGDTPRRKSVGLFASSGGL
AEEEGEEPAEEWEEAGDEEGVTAGGMGEADDMEQFIVKHNYLGDRDGPTP
WDCETILSTCSNLDNHPSLIIEEGRQRKGKKGKSNMYRGKMPGLPEEERG
PEKAVAMVALSKKSGLPLGVLPMAEKKKVGVEIMNAGSKRDKAETEEEKR
LRKAAVKQARREGRAKKKEMAQAFKVVEKVANIHSRSGETAVARSVFQYS
*
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Synonyms
Publications