NO08G02510, NO08G02510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G02510 vs. NCBI_GenBank
Match: GBC13192.1 (gag-pol fusion protein [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 121.3 bits (303), Expect = 2.400e-24 Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPN 138 RL AGL ++P K KFA E FLG +SKDGI+ +P +S VK+FP NL +R F+GL SYYR FI+ FS IA PLN L ++W AQ+ AF+ LK LIS+P+L +P+ N Sbjct: 1326 RLRDAGLKLNPEKCKFASTELAFLGHVISKDGIRTDPGKISKVKDFPRPTNLTQLRGFLGLASYYRRFIKDFSKIANPLNKLLKKNVPFNWTNAQQQAFEYLKNCLISSPILTYPQWN 1443
BLAST of NO08G02510 vs. NCBI_GenBank
Match: EGO04961.1 (hypothetical protein SERLA73DRAFT_24707, partial [Serpula lacrymans var. lacrymans S7.3]) HSP 1 Score: 120.9 bits (302), Expect = 3.100e-24 Identity = 58/119 (48.74%), Postives = 75/119 (63.03%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPNK 139 RL L V P K F E FLG + ++GI+ NPE V A+ +P ++GVRAF+GL ++YR FIE F+ I PLNDLT W WG ++ AFDKLKQA +AP+LAFPE +K Sbjct: 40 RLQERDLFVKPEKCNFKVKEVDFLGMIIGQNGIRMNPEKVQAILEWPEPTRVKGVRAFLGLGNFYRRFIENFAKITRPLNDLTKKDLVWQWGAKEQEAFDKLKQAFTTAPILAFPELDK 158
BLAST of NO08G02510 vs. NCBI_GenBank
Match: XP_007314333.1 (hypothetical protein SERLADRAFT_433232 [Serpula lacrymans var. lacrymans S7.9] >EGO30091.1 hypothetical protein SERLADRAFT_433232 [Serpula lacrymans var. lacrymans S7.9]) HSP 1 Score: 120.9 bits (302), Expect = 3.100e-24 Identity = 58/119 (48.74%), Postives = 75/119 (63.03%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPNK 139 RL L V P K F E FLG + ++GI+ NPE V A+ +P ++GVRAF+GL ++YR FIE F+ I PLNDLT W WG ++ AFDKLKQA +AP+LAFPE +K Sbjct: 488 RLQERDLFVKPEKCNFKVKEVDFLGMIIGQNGIRMNPEKVQAILEWPEPTRVKGVRAFLGLGNFYRRFIENFAKITRPLNDLTKKDLVWQWGAKEQEAFDKLKQAFTTAPILAFPELDK 606
BLAST of NO08G02510 vs. NCBI_GenBank
Match: XP_007313168.1 (putative retrotransposon [Serpula lacrymans var. lacrymans S7.9] >EGO31284.1 putative retrotransposon [Serpula lacrymans var. lacrymans S7.9]) HSP 1 Score: 118.6 bits (296), Expect = 1.500e-23 Identity = 57/119 (47.90%), Postives = 75/119 (63.03%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPNK 139 RL L V P K F E FLG + ++ I+ NPE V A+ ++P ++GVRAF+GL ++YR FIE F+ I PLNDLT WHW ++ AFDKLKQA +AP+LAFPE +K Sbjct: 746 RLQERDLFVKPEKCNFNVKEVDFLGMIIGQNRIRMNPEKVQAILDWPEPTRVKGVRAFLGLGNFYRRFIENFAKITRPLNDLTKKDIVWHWSAKEQEAFDKLKQAFTTAPILAFPELDK 864
BLAST of NO08G02510 vs. NCBI_GenBank
Match: KXJ11369.1 (Transposon Ty3-I Gag-Pol polyprotein [Exaiptasia pallida]) HSP 1 Score: 118.6 bits (296), Expect = 1.500e-23 Identity = 58/118 (49.15%), Postives = 75/118 (63.56%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPN 138 RL AA L + AK KFAR FLG VS DGI+ NP + AVK FP + VR+F+GL +YYR F++GF+ +A PLN LT R+ W + AF+KLK AL SAP+L +P+ N Sbjct: 778 RLRAANLKLKTAKCKFARNSVAFLGHIVSSDGIRPNPAKIEAVKTFPVPTKTKDVRSFLGLANYYRRFVKGFAELASPLNALTSKHKRFEWTPQCQIAFEKLKDALCSAPILVYPDFN 895
BLAST of NO08G02510 vs. NCBI_GenBank
Match: KXJ12376.1 (Transposon Ty3-I Gag-Pol polyprotein [Exaiptasia pallida]) HSP 1 Score: 118.6 bits (296), Expect = 1.500e-23 Identity = 53/116 (45.69%), Postives = 77/116 (66.38%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPE 136 RL +A L + P+K FA FLG +++DGI NP+ +SAVKNFP + ++ VR+F+GL +YYR F+ F+ IA PLN L C ++ W + + AFDKLK AL +P+LA+P+ Sbjct: 652 RLRSANLRLKPSKCDFATKSVKFLGHIITRDGISPNPDKISAVKNFPVPKCVKEVRSFLGLANYYRRFVNSFAKIAAPLNALMCKDKQFFWSEQCQSAFDKLKAALCESPILAYPD 767
BLAST of NO08G02510 vs. NCBI_GenBank
Match: KXJ15017.1 (Transposon Ty3-G Gag-Pol polyprotein [Exaiptasia pallida]) HSP 1 Score: 118.2 bits (295), Expect = 2.000e-23 Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFP 135 RL A + + P K FA +LG +S DG++ NP+ + AV FP +NL+GVR+F+GL +YYR F+ F+ IA PLN+LT + ++ W + + AFD LKQALISAP+LAFP Sbjct: 673 RLRDADIRLKPTKCAFASPTIEYLGHIISADGVRPNPDKIKAVAEFPIPKNLKGVRSFLGLANYYRRFVHNFAKIAVPLNNLTRKSVKFQWTQECQTAFDTLKQALISAPILAFP 787
BLAST of NO08G02510 vs. NCBI_GenBank
Match: KMQ92283.1 (reverse ribonuclease integrase [Lasius niger]) HSP 1 Score: 117.9 bits (294), Expect = 2.600e-23 Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPE 136 RL A L ++P K +F + +LG + +DGI+ +PE VSAV N+P ++ +R F+G+ S+YR FI FS++A PL LT RW WG +K AFD+LK L+SAPVLA P+ Sbjct: 293 RLRDARLRLNPEKCRFCVGQLKYLGHVIDRDGIRTDPEKVSAVANWPEPTTIKQIRQFLGMASWYRRFIANFSSVAAPLTQLTRKNARWAWGATEKEAFDRLKHTLVSAPVLACPD 408
BLAST of NO08G02510 vs. NCBI_GenBank
Match: KMQ85886.1 (reverse ribonuclease integrase, partial [Lasius niger]) HSP 1 Score: 117.1 bits (292), Expect = 4.400e-23 Identity = 55/116 (47.41%), Postives = 75/116 (64.66%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPE 136 RL A L ++P K +F + +LG + +DGI+ +PE VSAV N+P ++ VR F+G+ S+YR FI FS+IA PL LT RW WG +K AFD+LK L+SAPVLA P+ Sbjct: 298 RLRDARLRLNPEKCRFCVGQLKYLGHVIDRDGIRTDPEKVSAVANWPEPTTIKQVRQFLGMASWYRQFIANFSSIAAPLTRLTRKNARWAWGLIEKEAFDRLKHTLVSAPVLACPD 413
BLAST of NO08G02510 vs. NCBI_GenBank
Match: EXX52028.1 (gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 116.7 bits (291), Expect = 5.800e-23 Identity = 56/119 (47.06%), Postives = 76/119 (63.87%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPNK 139 RL AGL ++P K F + E FLG VS GI+ +P + VK+FP N+ +R F GL SYYR F+ GFS IA PLN L ++WG+ Q+ AF++LKQ LI++P+L FP+ NK Sbjct: 213 RLEDAGLKLNPDKCSFVKEELEFLGHIVSNRGIRTDPAKIQKVKDFPTPLNVTQLRGFFGLASYYRRFVPGFSRIATPLNKLLKKGVAYNWGEKQQVAFEQLKQTLITSPILVFPDFNK 331 The following BLAST results are available for this feature:
BLAST of NO08G02510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02510 ID=NO08G02510|Name=NO08G02510|organism=Nannochloropsis oceanica|type=gene|length=420bpback to top protein sequence of NO08G02510.1 >NO08G02510.1-protein ID=NO08G02510.1-protein|Name=NO08G02510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=140bpback to top Synonyms
Publications
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