NO08G02440, NO08G02440 (gene) Nannochloropsis oceanica

Overview
NameNO08G02440
Unique NameNO08G02440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1708
Alignment locationchr8:707844..709551 -

Link to JBrowse

Properties
Property NameValue
DescriptionN-carbamoyl-D-amino acid hydrolase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:707844..709551 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036526C-N_Hydrolase_sf
IPR003010C-N_Hydrolase
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO08G02440 vs. NCBI_GenBank
Match: WP_067018438.1 (N-carbamoylputrescine amidase [Marinomonas spartinae] >SBS35282.1 N-carbamoyl-D-amino acid hydrolase [Marinomonas spartinae])

HSP 1 Score: 385.2 bits (988), Expect = 2.000e-103
Identity = 186/295 (63.05%), Postives = 229/295 (77.63%), Query Frame = 0
Query:   11 VKVAATQFAASMKLAENLIKGEALVREAARQGAKIILLQELFAGPYFCQEMTSGFLAWAEPVEESVVVKRFQALAAELQVVLPVSFYERAGNAYYNSVAMVDADGTLLGVYRKSHIPDSPGYFEKFYFTPGDSGFRVWKTRYAKLGVGICWDQWFPETARCLALQGAELLLFPTAIGSEPQDGAIDSRAHWRRVMQGHAGANMTPVIASNRVGVETPFSQDPGSACVRDSSITFYGNSFITDETGAILADANDHSEAVLVVAFDLAKIRQARASWGMFRDRRPALYKPLLTKDGI 306
            V VAATQ A S  + ENL K EA+VR+AA+QGA+IILLQELF  PYFC E++  F A A  +EE+   KRF ALA EL+VVLP S++E+AGN  YN+VAM+DADG+L+G YRK+HIPDS GY EK+YF+PGD+GF+VW TRYAK+G+GICWDQWFPETARC+ALQGAELL FPTAIGSEP    +DS+ HW++VMQGHA AN TPVIASNR+G ET        A  RD S+TF+G+SFI DETGA +A+A+  SE VLV  FDL  +   R +WG++RDRRP+LY  + T DG+
Sbjct:    4 VTVAATQMACSWNIEENLNKAEAIVRQAAQQGAQIILLQELFETPYFCIEISESFHALATTLEENTAFKRFSALAKELEVVLPFSWFEKAGNVRYNTVAMIDADGSLMGTYRKTHIPDSDGYLEKYYFSPGDTGFKVWNTRYAKIGIGICWDQWFPETARCMALQGAELLFFPTAIGSEPSQPELDSKPHWQQVMQGHAAANQTPVIASNRIGTET--------AKYRDLSLTFFGSSFIADETGAKVAEADRTSEGVLVHEFDLDHLAFQRQAWGLYRDRRPSLYHTIQTLDGV 290          
BLAST of NO08G02440 vs. NCBI_GenBank
Match: WP_067344910.1 (N-carbamoylputrescine amidase [Marinomonas spartinae] >SBS39438.1 N-carbamoyl-D-amino acid hydrolase [Marinomonas spartinae])

HSP 1 Score: 384.0 bits (985), Expect = 4.400e-103
Identity = 186/295 (63.05%), Postives = 228/295 (77.29%), Query Frame = 0
Query:   11 VKVAATQFAASMKLAENLIKGEALVREAARQGAKIILLQELFAGPYFCQEMTSGFLAWAEPVEESVVVKRFQALAAELQVVLPVSFYERAGNAYYNSVAMVDADGTLLGVYRKSHIPDSPGYFEKFYFTPGDSGFRVWKTRYAKLGVGICWDQWFPETARCLALQGAELLLFPTAIGSEPQDGAIDSRAHWRRVMQGHAGANMTPVIASNRVGVETPFSQDPGSACVRDSSITFYGNSFITDETGAILADANDHSEAVLVVAFDLAKIRQARASWGMFRDRRPALYKPLLTKDGI 306
            V VAATQ A S  + ENL K EALVR+AA+QGA+IILLQELF  PYFC E++  F A A  +EE+   KRF ALA EL+VVLP S++E+AGN  YN+VAM+DADG+L+G YRK+HIPDS GY EK+YF+PGD+GF+VW TRYAK+G+GICWDQWFPETARC+ALQGAELL FPTAIG EP    +DS+ HW++VMQGHA AN TPVIASNR+G ET        A  RD S+TF+G+SFI DETGA +A+A+  SE VLV  FDL  +   R +WG++RDRRP+LY  + T DG+
Sbjct:    4 VTVAATQMACSWNIEENLNKAEALVRQAAQQGAQIILLQELFETPYFCIEISESFHALATTLEENTAFKRFSALAKELEVVLPFSWFEKAGNVRYNTVAMIDADGSLMGTYRKTHIPDSDGYLEKYYFSPGDTGFKVWNTRYAKIGIGICWDQWFPETARCMALQGAELLFFPTAIGCEPSQPELDSKPHWQQVMQGHAAANQTPVIASNRIGTET--------AKYRDLSLTFFGSSFIADETGAKVAEADRTSEGVLVHEFDLDHLAFQRQAWGLYRDRRPSLYHTIQTLDGV 290          
BLAST of NO08G02440 vs. NCBI_GenBank
Match: WP_091343222.1 (N-carbamoylputrescine amidase [Alkalimonas amylolytica] >SEA76080.1 N-carbamoylputrescine amidase [Alkalimonas amylolytica])

HSP 1 Score: 382.9 bits (982), Expect = 9.900e-103
Identity = 184/294 (62.59%), Postives = 226/294 (76.87%), Query Frame = 0
Query:   11 VKVAATQFAASMKLAENLIKGEALVREAARQGAKIILLQELFAGPYFCQEMTSGFLAWAEPVEESVVVKRFQALAAELQVVLPVSFYERAGNAYYNSVAMVDADGTLLGVYRKSHIPDSPGYFEKFYFTPGDSGFRVWKTRYAKLGVGICWDQWFPETARCLALQGAELLLFPTAIGSEPQDGAIDSRAHWRRVMQGHAGANMTPVIASNRVGVETPFSQDPGSACVRDSSITFYGNSFITDETGAILADANDHSEAVLVVAFDLAKIRQARASWGMFRDRRPALYKPLLTKDG 305
            V VAATQ      + EN+ +GE LVR+AA QGA+IILLQELF   YFCQ+    +L +A  VEE+  ++ FQA+A EL VVLP+SFYE+AGN +YNS+A++DADG+LLGVYRKSHIPD PGY EKFYFTPGDSGF+VW+TRYAK+G+GICWDQWFPE AR +AL GAELL +PTAIGSEP D  ++SR HW+R  QGHA AN+ P+IASNR+GVET            D +ITFYG+SFI +E GA + +A++ SEAVLV  FDL ++ Q R  WG+FRDRR  LY+PLLTKDG
Sbjct:    4 VTVAATQMIGGWNVDENIARGEKLVRQAAAQGAQIILLQELFERNYFCQKQKEAYLDFATTVEENPAIRHFQAIAKELAVVLPISFYEKAGNCFYNSIAVLDADGSLLGVYRKSHIPDGPGYSEKFYFTPGDSGFKVWQTRYAKIGIGICWDQWFPECARSMALMGAELLFYPTAIGSEPHDATVNSRDHWQRTQQGHAAANLVPLIASNRIGVETE----------DDFAITFYGSSFIANEYGAKVQEADESSEAVLVHTFDLDEVAQNRRGWGVFRDRRIDLYQPLLTKDG 287          
BLAST of NO08G02440 vs. NCBI_GenBank
Match: WP_099056729.1 (N-carbamoylputrescine amidase [Rhizobium sp. ACO-34A] >ATN33128.1 N-carbamoylputrescine amidase [Rhizobium sp. ACO-34A])

HSP 1 Score: 381.7 bits (979), Expect = 2.200e-102
Identity = 183/294 (62.24%), Postives = 228/294 (77.55%), Query Frame = 0
Query:   11 VKVAATQFAASMKLAENLIKGEALVREAARQGAKIILLQELFAGPYFCQEMTSGFLAWAEPVEESVVVKRFQALAAELQVVLPVSFYERAGNAYYNSVAMVDADGTLLGVYRKSHIPDSPGYFEKFYFTPGDSGFRVWKTRYAKLGVGICWDQWFPETARCLALQGAELLLFPTAIGSEPQDGAIDSRAHWRRVMQGHAGANMTPVIASNRVGVETPFSQDPGSACVRDSSITFYGNSFITDETGAILADANDHSEAVLVVAFDLAKIRQARASWGMFRDRRPALYKPLLTKDG 305
            V VAATQ A S  L  N+ + E L+R+AA  GA+IIL+QELF  PYFCQ+  + F   A+P E + ++  F  LAAEL VVLPVSF+E+AG  Y+NSVA+VDADGT+LG+YRKSHIPD PGY EK+YF+PGD+GFRVW+TR+AK+GVGICWDQWFPE AR +ALQGAELL +PTAIGSEPQD  IDS AHW+RVMQGHA AN+ PVIASNR+G      ++PG    + + +TFYG+SFI D+TGA +A+A+  SE VL   FDL  I + R++WG+FRDRRP LY+PL+T DG
Sbjct:    4 VTVAATQMACSWDLKGNIERAETLIRKAAADGAQIILIQELFEAPYFCQDQIAEFFDMAKPFEGNPLIAHFSKLAAELNVVLPVSFFEKAGQTYFNSVAIVDADGTVLGLYRKSHIPDGPGYTEKYYFSPGDTGFRVWQTRHAKIGVGICWDQWFPEAARAMALQGAELLFYPTAIGSEPQDPTIDSAAHWQRVMQGHAAANVVPVIASNRIG------KEPGR---KGTELTFYGSSFIADQTGAKIAEADRTSETVLTATFDLEGIAKQRSAWGLFRDRRPELYRPLMTLDG 288          
BLAST of NO08G02440 vs. NCBI_GenBank
Match: WP_088149981.1 (N-carbamoylputrescine amidase [Inquilinus limosus] >OWJ68332.1 N-carbamoylputrescine amidase [Inquilinus limosus])

HSP 1 Score: 379.4 bits (973), Expect = 1.100e-101
Identity = 187/296 (63.18%), Postives = 225/296 (76.01%), Query Frame = 0
Query:   11 VKVAATQFAASMKLAENLIKGEALVREAARQGAKIILLQELFAGPYFCQEMTSGFLAWAEPVEESVVVKRFQALAAELQVVLPVSFYERAGNAYYNSVAMVDADGTLLGVYRKSHIPDSPGYFEKFYFTPGDSGFRVWKTRYAKLGVGICWDQWFPETARCLALQGAELLLFPTAIGSEPQDGAIDSRAHWRRVMQGHAGANMTPVIASNRVGVE--TPFSQDPGSACVRDSSITFYGNSFITDETGAILADANDHSEAVLVVAFDLAKIRQARASWGMFRDRRPALYKPLLTKDG 305
            V VAATQ   +   AE L + EALVR+AA +GA+I+L QELFA PYFC++      A A+P++   VV+RF+ LAAELQV +PVS +ERA NAYYNS+AMVDADG++LGVYRKSHIPD PGY EKFYF PGD+GF+VWKTRY  +G GICWDQW+PETARC+AL GA++LL+PTAIGSEPQDG +DS+AHW RVMQGHAGAN+ P++ASNR+G E    FSQ            TFYG+SFI D+TGA++A A    E VLV  FDL  IR  RASWG+FRDRRP LY  +LT DG
Sbjct:    4 VTVAATQTFCTWNEAETLDRVEALVRQAAGRGAQIVLPQELFAAPYFCRDELQTHFALAQPIDGHPVVERFRRLAAELQVAMPVSVFERANNAYYNSIAMVDADGSVLGVYRKSHIPDGPGYEEKFYFNPGDTGFKVWKTRYGVVGCGICWDQWYPETARCMALMGADVLLYPTAIGSEPQDGGLDSQAHWTRVMQGHAGANLVPLVASNRIGTEEGERFSQ------------TFYGSSFIADQTGALVAQAGRTEEEVLVARFDLDAIRAQRASWGVFRDRRPELYGAILTYDG 287          
BLAST of NO08G02440 vs. NCBI_GenBank
Match: WP_037455821.1 (N-carbamoylputrescine amidase [Skermanella stibiiresistens] >EWY38832.1 carbon-nitrogen family hydrolase [Skermanella stibiiresistens SB22])

HSP 1 Score: 379.0 bits (972), Expect = 1.400e-101
Identity = 186/298 (62.42%), Postives = 223/298 (74.83%), Query Frame = 0
Query:    9 TPVKVAATQFAASMKLAENLIKGEALVREAARQGAKIILLQELFAGPYFCQEMTSGFLAWAEPVEESVVVKRFQALAAELQVVLPVSFYERAGNAYYNSVAMVDADGTLLGVYRKSHIPDSPGYFEKFYFTPGDSGFRVWKTRYAKLGVGICWDQWFPETARCLALQGAELLLFPTAIGSEPQDGAIDSRAHWRRVMQGHAGANMTPVIASNRVGVETPFSQDPGSACVRDSSITFYGNSFITDETGAILADANDHSEAVLVVAFDLAKIRQARASWGMFRDRRPALYKPLLTKDGIL 307
            T V +AATQ + +     N+   E LVR AAR+GA+IILLQELF  PYFCQ+    F A A P ++  V++R  ALAAELQVVLPVSF+ERA NAYYNS+AM+DADG+ LG+YRKSHIPD PGY EK+YF PGD+GF V++TRYA +G  ICWDQWFPE+ARC+AL GAE+L +PTAIGSEPQD  IDSR HW+RVMQGHAGAN+ P++ASNR+GVET            +SSITFYG+SFI    G  +A+A    EAVL   FDL K+R ARASWG+FRDRRP LY P+ T DG L
Sbjct:    2 TNVTLAATQTSCTWDRDANVATAERLVRHAAREGAQIILLQELFETPYFCQDQKPEFFALAAPADDHPVLRRMSALAAELQVVLPVSFFERANNAYYNSIAMIDADGSTLGIYRKSHIPDGPGYQEKYYFNPGDTGFEVFRTRYATIGTAICWDQWFPESARCMALMGAEVLFYPTAIGSEPQDAGIDSRDHWQRVMQGHAGANLMPLVASNRIGVETG----------ANSSITFYGSSFIAGPQGEKVAEAPRDQEAVLTATFDLDKLRAARASWGLFRDRRPELYGPVQTLDGHL 289          
BLAST of NO08G02440 vs. NCBI_GenBank
Match: PJI45078.1 (N-carbamoylputrescine amidase [Rhizobium sp.])

HSP 1 Score: 376.7 bits (966), Expect = 7.100e-101
Identity = 179/294 (60.88%), Postives = 227/294 (77.21%), Query Frame = 0
Query:   11 VKVAATQFAASMKLAENLIKGEALVREAARQGAKIILLQELFAGPYFCQEMTSGFLAWAEPVEESVVVKRFQALAAELQVVLPVSFYERAGNAYYNSVAMVDADGTLLGVYRKSHIPDSPGYFEKFYFTPGDSGFRVWKTRYAKLGVGICWDQWFPETARCLALQGAELLLFPTAIGSEPQDGAIDSRAHWRRVMQGHAGANMTPVIASNRVGVETPFSQDPGSACVRDSSITFYGNSFITDETGAILADANDHSEAVLVVAFDLAKIRQARASWGMFRDRRPALYKPLLTKDG 305
            V VAATQ A +  +  N+ + E+L+R+AA  GA+I+L+QELF  PYFCQ+    F   A+P E + ++  F  LAAEL VVLPVSF+E+AG  Y+NSVA+VDADGT+LG+YRKSHIPD PGY EK+YF+PGD+GFRVW+T++A++GVGICWDQWFPE AR +ALQGAELL +PTAIGSEPQD  IDS AHW+RVMQGHA AN+ PVIASNR+G+E      PG    + + +TFYG+SFI D+TG  +A+A+  SE+VL   FDL  I + R++WG+FRDRRP LY PLLT DG
Sbjct:    4 VTVAATQMACTWDIPGNIARAESLIRKAAADGAQIVLIQELFEAPYFCQDQIGEFFDMAKPFENNPLIAHFSRLAAELNVVLPVSFFEKAGQTYFNSVAIVDADGTVLGLYRKSHIPDGPGYTEKYYFSPGDTGFRVWQTKHARIGVGICWDQWFPEAARAMALQGAELLFYPTAIGSEPQDPTIDSAAHWQRVMQGHAAANIMPVIASNRIGME------PGR---KGTELTFYGSSFIADQTGDKVAEADRASESVLTATFDLDGIARQRSNWGLFRDRRPELYTPLLTMDG 288          
BLAST of NO08G02440 vs. NCBI_GenBank
Match: WP_028671321.1 (N-carbamoylputrescine amidase [Saccharospirillum impatiens])

HSP 1 Score: 375.9 bits (964), Expect = 1.200e-100
Identity = 179/295 (60.68%), Postives = 223/295 (75.59%), Query Frame = 0
Query:   10 PVKVAATQFAASMKLAENLIKGEALVREAARQGAKIILLQELFAGPYFCQEMTSGFLAWAEPVEESVVVKRFQALAAELQVVLPVSFYERAGNAYYNSVAMVDADGTLLGVYRKSHIPDSPGYFEKFYFTPGDSGFRVWKTRYAKLGVGICWDQWFPETARCLALQGAELLLFPTAIGSEPQDGAIDSRAHWRRVMQGHAGANMTPVIASNRVGVETPFSQDPGSACVRDSSITFYGNSFITDETGAILADANDHSEAVLVVAFDLAKIRQARASWGMFRDRRPALYKPLLTKDG 305
            PV VAATQ +    +  N+ K +ALVREAA +GA+IIL+QELF   YFCQ+   G++A+A PVEE+  +K F A+AAEL+VVLP+SFYERA NA+YN+VA++DADG+ LG+YRK+HIPD PGY EKFYFTPGD+GF+VW T YA++GVGICWDQWFPETAR +AL GAELL +PTAIGSEPQD  IDSR HW+   QGHA AN+TP IASNR G+E    Q          +I+FYG+SFI +E G  +A+ +   E VLV  FDL ++   R +WG+FRDRRP LY PL+TKDG
Sbjct:    3 PVTVAATQMSCGWDVDANIAKADALVREAAAKGAQIILIQELFERCYFCQKQIEGYMAFATPVEENPAIKHFSAVAAELKVVLPISFYERANNAFYNTVAIIDADGSNLGIYRKTHIPDGPGYSEKFYFTPGDTGFKVWDTAYARIGVGICWDQWFPETARAMALMGAELLFYPTAIGSEPQDHTIDSRDHWQITQQGHAAANLTPYIASNRTGIEAEGEQ----------TISFYGSSFIANELGQKVAEFDRKDEGVLVHTFDLDEVASTRRAWGVFRDRRPDLYDPLMTKDG 287          
BLAST of NO08G02440 vs. NCBI_GenBank
Match: GAQ92028.1 (Carbon-nitrogen hydrolase [Klebsormidium nitens])

HSP 1 Score: 374.8 bits (961), Expect = 2.700e-100
Identity = 182/294 (61.90%), Postives = 222/294 (75.51%), Query Frame = 0
Query:   11 VKVAATQFAASMKLAENLIKGEALVREAARQGAKIILLQELFAGPYFCQEMTSGFLAWAEPVEESVVVKRFQALAAELQVVLPVSFYERAGNAYYNSVAMVDADGTLLGVYRKSHIPDSPGYFEKFYFTPGDSGFRVWKTRYAKLGVGICWDQWFPETARCLALQGAELLLFPTAIGSEPQDGAIDSRAHWRRVMQGHAGANMTPVIASNRVGVETPFSQDPGSACVRDSSITFYGNSFITDETGAILADANDHSEAVLVVAFDLAKIRQARASWGMFRDRRPALYKPLLTKDG 305
            V VAATQFA +   A N+   E ++REAA++GA+IIL+QELF   YFCQ       ++A+P E   ++ RF ALA EL VVLPVSF+ERA NA++NSV ++DADGT LG+YRK+HIPD  GY EKFYF PGD+GF+V+KT+YA +GV ICWDQWFPE AR +AL GAE+L +PTAIG+EPQD  IDSR HWRRVMQGHAGAN+ PV+ASNR+G E    +DP      DS ITFYG SFI   TG ++ DAND  EAV+V +FDL +IR  RA WG+FRDRRP +YKPLLT DG
Sbjct:    5 VSVAATQFACTSDEATNVQNAERMIREAAKKGAQIILIQELFENLYFCQHQKEALFSYAKPREGHPLLARFAALAKELAVVLPVSFFERANNAHFNSVVVIDADGTELGLYRKTHIPDGTGYQEKFYFNPGDTGFKVFKTKYADIGVAICWDQWFPEAARSMALMGAEILFYPTAIGTEPQDATIDSRHHWRRVMQGHAGANLVPVVASNRIGKEV--FKDP------DSEITFYGTSFIAGPTGEVVVDANDKDEAVIVASFDLDQIRGQRAGWGVFRDRRPEMYKPLLTLDG 290          
BLAST of NO08G02440 vs. NCBI_GenBank
Match: WP_014292661.1 (N-carbamoylputrescine amidase [Oceanimonas sp. GK1] >AEY01942.1 putative carbon-nitrogen hydrolase [Oceanimonas sp. GK1])

HSP 1 Score: 374.0 bits (959), Expect = 4.600e-100
Identity = 183/298 (61.41%), Postives = 226/298 (75.84%), Query Frame = 0
Query:    9 TPVKVAATQFAASMKLAENLIKGEALVREAARQGAKIILLQELFAGPYFCQEMTSGFLAWAEPVEESVVVKRFQALAAELQVVLPVSFYERAGNAYYNSVAMVDADGTLLGVYRKSHIPDSPGYFEKFYFTPGDSGFRVWKTRYAKLGVGICWDQWFPETARCLALQGAELLLFPTAIGSEPQDGAIDSRAHWRRVMQGHAGANMTPVIASNRVGVETPFSQDPGSACVRDSSITFYGNSFITDETGAILADANDHSEAVLVVAFDLAKIRQARASWGMFRDRRPALYKPLLTKDGIL 307
            T V VAATQ A S    +N+ + E LVR+AA QGA+IIL+QELF  PYFC + +    A A+ V+ S ++  FQALA EL+VVLP+SF+ERAGNAYYNS+ ++DADG+LL +YRK+HIP+ PGY EK +FTPGD+GF+VW+TRYAK+GVGICWDQWFPETAR LAL GAEL+ FPTAIGSEPQD +I+S+ HW R  QGHA AN+ PVIASNR+G E     D       +  ITFYG+SFI DE G ++  A+  SE VLV  FDLA+I + RASWG+FRDRRPA+Y+ LLT DG L
Sbjct:    2 TMVTVAATQMACSWNRDDNIARAEKLVRQAASQGAQIILIQELFEAPYFCIDQSPEHFALAQEVDNSPLIAHFQALAKELEVVLPLSFFERAGNAYYNSLVVIDADGSLLDLYRKTHIPNGPGYQEKQFFTPGDTGFKVWQTRYAKIGVGICWDQWFPETARSLALLGAELIFFPTAIGSEPQDASINSQPHWTRTQQGHAAANLVPVIASNRIGTEQSKYHD-------NLEITFYGSSFIADEFGELVQQADKTSECVLVHRFDLAEIAKTRASWGLFRDRRPAMYQTLLTSDGKL 292          
The following BLAST results are available for this feature:
BLAST of NO08G02440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_067018438.12.000e-10363.05N-carbamoylputrescine amidase [Marinomonas spartin... [more]
WP_067344910.14.400e-10363.05N-carbamoylputrescine amidase [Marinomonas spartin... [more]
WP_091343222.19.900e-10362.59N-carbamoylputrescine amidase [Alkalimonas amyloly... [more]
WP_099056729.12.200e-10262.24N-carbamoylputrescine amidase [Rhizobium sp. ACO-3... [more]
WP_088149981.11.100e-10163.18N-carbamoylputrescine amidase [Inquilinus limosus]... [more]
WP_037455821.11.400e-10162.42N-carbamoylputrescine amidase [Skermanella stibiir... [more]
PJI45078.17.100e-10160.88N-carbamoylputrescine amidase [Rhizobium sp.][more]
WP_028671321.11.200e-10060.68N-carbamoylputrescine amidase [Saccharospirillum i... [more]
GAQ92028.12.700e-10061.90Carbon-nitrogen hydrolase [Klebsormidium nitens][more]
WP_014292661.14.600e-10061.41N-carbamoylputrescine amidase [Oceanimonas sp. GK1... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02440.1NO08G02440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582663gene_3573Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02440.1NO08G02440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02440 ID=NO08G02440|Name=NO08G02440|organism=Nannochloropsis oceanica|type=gene|length=1708bp
CCGGGATGGTTGTTGGGCTCCTGTCAGCATTGGGGATTGTTGAGTGTGTT
TGTGAAACATTTCATCATACATAGCCCTCAGCGCGTAGGAACTCCTCTCG
CTCCCTCGCTGAACAACTTTCTGCATACAGATGGACAGTGTACATGCCCA
AAAGACTAAGCTCTAGCTATTTCCACTCATTCTATTATAGCTACAGCATC
TCTCTACAGTACAACACATTACTCGCCGCCGCTCCTCTGAAAAAAGCCCT
CCTTCTCCCTCCTTCCTTCCATCCCTCGTCTGGCGGTCTATAGTTTGGCC
TCCTTCGCGCAATAATGTTATGCACACTCTGAATTGCACATACTCTGTCA
GACGCAAGAGGGAGCGATCATGGTTTCATTTTGTACGAATAGAGCCACCA
CCGAAGCTAATGGTGTTGAAGAGCCTGTATCGTTCAATGAATTAGAACGC
CTACCGACGACGAGCTGCCTGGTTCCTCGCTTCCCAATTTTGTTCCATCT
CCCAGTCTCAACCAGCCACTCCACCACAACCCATCCTCTAGGTGTAGCTT
GCCGCGACATTAGCACGTGGTGCCATGGCTTCCACGAATAAGTCGACGAC
CCCAGTGAAGGTAGCTGCCACTCAGTTTGCGGCGTCTATGAAGCTGGCGG
AAAACCTAATCAAGGGCGAGGCTTTGGTGAGGGAGGCCGCGCGACAGGGC
GCAAAGgtacgcgtatgcatgtggttgtggcagataggtgacatttttcc
aaaggtaatagaaagcttcaatttatacaggaaattaccctttttgaatt
tcttttccgtcattccacgaaatcataagATCATCTTGCTGCAAGAGCTG
TTTGCGGGCCCCTACTTTTGCCAGGAAATGACAAGTGGATTCTTGGCCTG
GGCCGAGCCAGTGGAGGAATCCGTGGTGGTAAAGCGTTTCCAAGCATTGG
CTGCGGAGCTACAGGTAGTACTACCCGTGAGCTTCTATGAGCGGGCGGGG
AACGCCTACTACAACAGCGTAGCGATGGTGGATGCGGACGGGACTCTGCT
TGGTGTGTATCGCAAGTCGCATATTCCTGACTCGCCCGGCTACTTTGAAA
AGTTTTATTTCACGCCCGGCGACAGCGGCTTTCGGGTCTGGAAGACGCGC
TACGCAAAACTTGGCGTGGGTATTTGCTGGGACCAATGGTTTCCCGAGAC
GGCCCGGTGCTTGGCGTTGCAAGGTGCGGAGCTGCTTTTATTCCCCACGG
CCATAGGCTCCGAGCCCCAGGACGGTGCGATTGACTCCCGGGCACACTGG
CGGCGGGTAATGCAGGGCCATGCTGGCGCCAATATGACGCCCGTCATTGC
CTCTAATCGCGTAGGCGTCGAAACGCCGTTCTCTCAAGACCCTGGCAGCG
CCTGCGTGCGCGACTCCTCCATCACCTTCTATGGGAATTCCTTCATCACC
GATGAGACAGGAGCCATCCTCGCCGACGCAAATGACCACTCCGAAGCCGT
GTTGGTAGTGGCCTTCGACCTTGCCAAGATCCGGCAAGCCCGCGCGTCGT
GGGGCATGTTTCGAGACCGACGCCCGGCTTTGTATAAGCCTCTTTTGACC
AAGGACGGCATCCTGATAGCGCCCTTGTGGAAAGAAATACACAATACGTA
TTGAAAATTGTGCAGATAGAGGAAAAAGAGATTTTCAAAATGAAATATAA
TCAGTAAC
back to top

protein sequence of NO08G02440.1

>NO08G02440.1-protein ID=NO08G02440.1-protein|Name=NO08G02440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bp
MASTNKSTTPVKVAATQFAASMKLAENLIKGEALVREAARQGAKIILLQE
LFAGPYFCQEMTSGFLAWAEPVEESVVVKRFQALAAELQVVLPVSFYERA
GNAYYNSVAMVDADGTLLGVYRKSHIPDSPGYFEKFYFTPGDSGFRVWKT
RYAKLGVGICWDQWFPETARCLALQGAELLLFPTAIGSEPQDGAIDSRAH
WRRVMQGHAGANMTPVIASNRVGVETPFSQDPGSACVRDSSITFYGNSFI
TDETGAILADANDHSEAVLVVAFDLAKIRQARASWGMFRDRRPALYKPLL
TKDGILIAPLWKEIHNTY*
back to top
Synonyms
Publications