NO08G02420, NO08G02420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G02420 vs. NCBI_GenBank
Match: ETL84922.1 (hypothetical protein L917_15402 [Phytophthora parasitica]) HSP 1 Score: 200.3 bits (508), Expect = 5.200e-48 Identity = 94/170 (55.29%), Postives = 122/170 (71.76%), Query Frame = 0 Query: 11 PIPLSKS-TLKPVTWASLGLMAVTGAGLAYYYQGEKEKKQQQALGKVTSYGKPALGGPWTLVDF-TGKPVTDADFRGEFLLLYFGFTHCPDICPSELVKVGRILDLLDKEPRLPMVRPVFISVDPDRDNVGQLRHYAQDFHPRILYLTGTQEQLAKVTKGYRVYFSKVRE 179 P+P +++ P+TW+ L L V G G YYY EK++ Q Q+ KVTS GKP LGGPWTLVD T + VTDA FRG++ LLYFGFTHCPDICP+ELV++G +LD L+ E P V P+F++VDP RD + Q++ Y DFHP+ LTGT++Q+A +TK YRVYFSK E Sbjct: 31 PVPGTRAEKFGPITWSGLALAGVVGNGAVYYYYSEKDRLQTQSTSKVTSVGKPLLGGPWTLVDCDTRRAVTDASFRGKYSLLYFGFTHCPDICPNELVRIGDVLDKLEAE-NCPEVVPLFVTVDPKRDTIAQMQAYKADFHPKFKMLTGTRDQVADITKAYRVYFSKADE 199
BLAST of NO08G02420 vs. NCBI_GenBank
Match: XP_009538414.1 (hypothetical protein PHYSODRAFT_362456 [Phytophthora sojae] >EGZ06517.1 hypothetical protein PHYSODRAFT_362456 [Phytophthora sojae]) HSP 1 Score: 199.5 bits (506), Expect = 8.900e-48 Identity = 95/170 (55.88%), Postives = 124/170 (72.94%), Query Frame = 0 Query: 11 PIPLSK-STLKPVTWASLGLMAVTGAGLAYYYQGEKEKKQQQALGKVTSYGKPALGGPWTLVDF-TGKPVTDADFRGEFLLLYFGFTHCPDICPSELVKVGRILDLLDKEPRLPMVRPVFISVDPDRDNVGQLRHYAQDFHPRILYLTGTQEQLAKVTKGYRVYFSKVRE 179 P+P ++ + PVTW+ L L V G+G+ YYY EK++ Q Q+ KVTS GKP LGGPWTLVD T + VTDA FRG++ LLYFGFTHCPDICP+ELV++G +LD L+ E + V P+F++VDP RD V Q++ Y DFHP+ LTGT++Q+A +TK YRVYFSK E Sbjct: 77 PVPGTRANNFGPVTWSGLALAGVVGSGVVYYYYSEKDRLQTQSTSKVTSVGKPLLGGPWTLVDCDTRRAVTDASFRGKYSLLYFGFTHCPDICPNELVRIGDVLDKLEVE-KCSEVVPLFVTVDPRRDTVEQMQAYKADFHPKFKMLTGTRDQVADITKAYRVYFSKADE 245
BLAST of NO08G02420 vs. NCBI_GenBank
Match: ETI44234.1 (hypothetical protein F443_11081 [Phytophthora parasitica P1569]) HSP 1 Score: 196.4 bits (498), Expect = 7.600e-47 Identity = 94/161 (58.39%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 19 LKPVTWASLGLMAVTGAGLAYYYQGEKEKKQQQALGKVTSYGKPALGGPWTLVDF-TGKPVTDADFRGEFLLLYFGFTHCPDICPSELVKVGRILDLLDKEPRLPMVRPVFISVDPDRDNVGQLRHYAQDFHPRILYLTGTQEQLAKVTKGYRVYFSKVRE 179 L PVTW+SL L V G+G YYYQ EK++ Q Q+ VTS GKP LGGPWTLVD TG+ VTDA FRG+ LLYFGFTHCPDICP+ELV++G +LD L+ + V P+FI+VDP RD + Q++ Y DFHP LTGT+EQ+A + + YRVYFSK E Sbjct: 55 LGPVTWSSLALAGVVGSGAVYYYQSEKDRLQTQSKSTVTSVGKPMLGGPWTLVDCDTGRAVTDASFRGKLSLLYFGFTHCPDICPNELVRIGDVLDKLEIDK--GEVVPLFITVDPKRDTIAQMQAYKVDFHPEFKMLTGTREQVADIAQAYRVYFSKADE 213
BLAST of NO08G02420 vs. NCBI_GenBank
Match: ETK84212.1 (hypothetical protein L915_10803 [Phytophthora parasitica]) HSP 1 Score: 194.5 bits (493), Expect = 2.900e-46 Identity = 92/161 (57.14%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 19 LKPVTWASLGLMAVTGAGLAYYYQGEKEKKQQQALGKVTSYGKPALGGPWTLVDF-TGKPVTDADFRGEFLLLYFGFTHCPDICPSELVKVGRILDLLDKEPRLPMVRPVFISVDPDRDNVGQLRHYAQDFHPRILYLTGTQEQLAKVTKGYRVYFSKVRE 179 L PVTW+SL L V G+G YYYQ EK++ Q Q+ VT GKP LGGPWTLVD TG+ VTDA FRG+ LLYFGFTHCPDICP+ELV++G +LD L+ + V P+F++VDP RD + Q++ Y DFHP+ LTGT+EQ+A + + YRVYFSK E Sbjct: 35 LGPVTWSSLALAGVVGSGAVYYYQSEKDRLQTQSKSTVTFVGKPMLGGPWTLVDCDTGRAVTDASFRGKLSLLYFGFTHCPDICPNELVRIGDVLDKLEIDK--GEVVPLFVTVDPKRDTIAQMQAYKVDFHPKFKMLTGTREQVADIVQAYRVYFSKADE 193
BLAST of NO08G02420 vs. NCBI_GenBank
Match: ETL37682.1 (hypothetical protein L916_10694 [Phytophthora parasitica]) HSP 1 Score: 194.5 bits (493), Expect = 2.900e-46 Identity = 92/161 (57.14%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 19 LKPVTWASLGLMAVTGAGLAYYYQGEKEKKQQQALGKVTSYGKPALGGPWTLVDF-TGKPVTDADFRGEFLLLYFGFTHCPDICPSELVKVGRILDLLDKEPRLPMVRPVFISVDPDRDNVGQLRHYAQDFHPRILYLTGTQEQLAKVTKGYRVYFSKVRE 179 L PVTW+SL L V G+G YYYQ EK++ Q Q+ VT GKP LGGPWTLVD TG+ VTDA FRG+ LLYFGFTHCPDICP+ELV++G +LD L+ + V P+F++VDP RD + Q++ Y DFHP+ LTGT+EQ+A + + YRVYFSK E Sbjct: 55 LGPVTWSSLALAGVVGSGAVYYYQSEKDRLQTQSKSTVTFVGKPMLGGPWTLVDCDTGRAVTDASFRGKLSLLYFGFTHCPDICPNELVRIGDVLDKLEIDK--GEVVPLFVTVDPKRDTIAQMQAYKVDFHPKFKMLTGTREQVADIVQAYRVYFSKADE 213
BLAST of NO08G02420 vs. NCBI_GenBank
Match: ETL90836.1 (hypothetical protein L917_10593 [Phytophthora parasitica] >ETM44091.1 hypothetical protein L914_10643 [Phytophthora parasitica]) HSP 1 Score: 194.5 bits (493), Expect = 2.900e-46 Identity = 92/161 (57.14%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 19 LKPVTWASLGLMAVTGAGLAYYYQGEKEKKQQQALGKVTSYGKPALGGPWTLVDF-TGKPVTDADFRGEFLLLYFGFTHCPDICPSELVKVGRILDLLDKEPRLPMVRPVFISVDPDRDNVGQLRHYAQDFHPRILYLTGTQEQLAKVTKGYRVYFSKVRE 179 L PVTW+SL L V G+G YYYQ EK++ Q Q+ VT GKP LGGPWTLVD TG+ VTDA FRG+ LLYFGFTHCPDICP+ELV++G +LD L+ + V P+F++VDP RD + Q++ Y DFHP+ LTGT+EQ+A + + YRVYFSK E Sbjct: 35 LGPVTWSSLALAGVVGSGAVYYYQSEKDRLQTQSKSTVTFVGKPMLGGPWTLVDCDTGRAVTDASFRGKLSLLYFGFTHCPDICPNELVRIGDVLDKLEIDK--GEVVPLFVTVDPKRDTIAQMQAYKVDFHPKFKMLTGTREQVADIVQAYRVYFSKADE 193
BLAST of NO08G02420 vs. NCBI_GenBank
Match: XP_008907056.1 (hypothetical protein PPTG_13083 [Phytophthora parasitica INRA-310] >ETN07771.1 hypothetical protein PPTG_13083 [Phytophthora parasitica INRA-310]) HSP 1 Score: 194.5 bits (493), Expect = 2.900e-46 Identity = 92/161 (57.14%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 19 LKPVTWASLGLMAVTGAGLAYYYQGEKEKKQQQALGKVTSYGKPALGGPWTLVDF-TGKPVTDADFRGEFLLLYFGFTHCPDICPSELVKVGRILDLLDKEPRLPMVRPVFISVDPDRDNVGQLRHYAQDFHPRILYLTGTQEQLAKVTKGYRVYFSKVRE 179 L PVTW+SL L V G+G YYYQ EK++ Q Q+ VT GKP LGGPWTLVD TG+ VTDA FRG+ LLYFGFTHCPDICP+ELV++G +LD L+ + V P+F++VDP RD + Q++ Y DFHP+ LTGT+EQ+A + + YRVYFSK E Sbjct: 35 LGPVTWSSLALAGVVGSGAVYYYQSEKDRLQTQSKSTVTFVGKPMLGGPWTLVDCDTGRAVTDASFRGKLSLLYFGFTHCPDICPNELVRIGDVLDKLEIDK--GEVVPLFVTVDPKRDTIAQMQAYKVDFHPKFKMLTGTREQVADIVQAYRVYFSKADE 193
BLAST of NO08G02420 vs. NCBI_GenBank
Match: ETO72885.1 (hypothetical protein F444_11156 [Phytophthora parasitica P1976]) HSP 1 Score: 194.5 bits (493), Expect = 2.900e-46 Identity = 92/161 (57.14%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 19 LKPVTWASLGLMAVTGAGLAYYYQGEKEKKQQQALGKVTSYGKPALGGPWTLVDF-TGKPVTDADFRGEFLLLYFGFTHCPDICPSELVKVGRILDLLDKEPRLPMVRPVFISVDPDRDNVGQLRHYAQDFHPRILYLTGTQEQLAKVTKGYRVYFSKVRE 179 L PVTW+SL L V G+G YYYQ EK++ Q Q+ VT GKP LGGPWTLVD TG+ VTDA FRG+ LLYFGFTHCPDICP+ELV++G +LD L+ + V P+F++VDP RD + Q++ Y DFHP+ LTGT+EQ+A + + YRVYFSK E Sbjct: 55 LGPVTWSSLALAGVVGSGAVYYYQSEKDRLQTQSKSTVTFVGKPMLGGPWTLVDCDTGRAVTDASFRGKLSLLYFGFTHCPDICPNELVRIGDVLDKLEIDK--GEVVPLFVTVDPKRDTIAQMQAYKVDFHPKFKMLTGTREQVADIVQAYRVYFSKADE 213
BLAST of NO08G02420 vs. NCBI_GenBank
Match: ETP14058.1 (hypothetical protein F441_10994 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 194.5 bits (493), Expect = 2.900e-46 Identity = 92/161 (57.14%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 19 LKPVTWASLGLMAVTGAGLAYYYQGEKEKKQQQALGKVTSYGKPALGGPWTLVDF-TGKPVTDADFRGEFLLLYFGFTHCPDICPSELVKVGRILDLLDKEPRLPMVRPVFISVDPDRDNVGQLRHYAQDFHPRILYLTGTQEQLAKVTKGYRVYFSKVRE 179 L PVTW+SL L V G+G YYYQ EK++ Q Q+ VT GKP LGGPWTLVD TG+ VTDA FRG+ LLYFGFTHCPDICP+ELV++G +LD L+ + V P+F++VDP RD + Q++ Y DFHP+ LTGT+EQ+A + + YRVYFSK E Sbjct: 35 LGPVTWSSLALAGVVGSGAVYYYQSEKDRLQTQSKSTVTFVGKPMLGGPWTLVDCDTGRAVTDASFRGKLSLLYFGFTHCPDICPNELVRIGDVLDKLEIDK--GEVVPLFVTVDPKRDTIAQMQAYKVDFHPKFKMLTGTREQVADIVQAYRVYFSKADE 193
BLAST of NO08G02420 vs. NCBI_GenBank
Match: ETP42108.1 (hypothetical protein F442_10983 [Phytophthora parasitica P10297]) HSP 1 Score: 194.5 bits (493), Expect = 2.900e-46 Identity = 92/161 (57.14%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 19 LKPVTWASLGLMAVTGAGLAYYYQGEKEKKQQQALGKVTSYGKPALGGPWTLVDF-TGKPVTDADFRGEFLLLYFGFTHCPDICPSELVKVGRILDLLDKEPRLPMVRPVFISVDPDRDNVGQLRHYAQDFHPRILYLTGTQEQLAKVTKGYRVYFSKVRE 179 L PVTW+SL L V G+G YYYQ EK++ Q Q+ VT GKP LGGPWTLVD TG+ VTDA FRG+ LLYFGFTHCPDICP+ELV++G +LD L+ + V P+F++VDP RD + Q++ Y DFHP+ LTGT+EQ+A + + YRVYFSK E Sbjct: 55 LGPVTWSSLALAGVVGSGAVYYYQSEKDRLQTQSKSTVTFVGKPMLGGPWTLVDCDTGRAVTDASFRGKLSLLYFGFTHCPDICPNELVRIGDVLDKLEIDK--GEVVPLFVTVDPKRDTIAQMQAYKVDFHPKFKMLTGTREQVADIVQAYRVYFSKADE 213 The following BLAST results are available for this feature:
BLAST of NO08G02420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02420 ID=NO08G02420|Name=NO08G02420|organism=Nannochloropsis oceanica|type=gene|length=4094bpback to top protein sequence of NO08G02420.5 >NO08G02420.5-protein ID=NO08G02420.5-protein|Name=NO08G02420.5|organism=Nannochloropsis oceanica|type=polypeptide|length=184bpback to top protein sequence of NO08G02420.4 >NO08G02420.4-protein ID=NO08G02420.4-protein|Name=NO08G02420.4|organism=Nannochloropsis oceanica|type=polypeptide|length=232bpback to top protein sequence of NO08G02420.3 >NO08G02420.3-protein ID=NO08G02420.3-protein|Name=NO08G02420.3|organism=Nannochloropsis oceanica|type=polypeptide|length=231bpback to top protein sequence of NO08G02420.2 >NO08G02420.2-protein ID=NO08G02420.2-protein|Name=NO08G02420.2|organism=Nannochloropsis oceanica|type=polypeptide|length=231bpback to top protein sequence of NO08G02420.1 >NO08G02420.1-protein ID=NO08G02420.1-protein|Name=NO08G02420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=279bpback to top Synonyms
Publications
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