NO08G02260, NO08G02260 (gene) Nannochloropsis oceanica

Overview
NameNO08G02260
Unique NameNO08G02260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2079
Alignment locationchr8:662042..664120 -

Link to JBrowse

Properties
Property NameValue
DescriptionNa /H antiporter
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:662042..664120 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR004680Cit_transptr-like_dom
IPR000644CBS_dom
Homology
[Close]
BLAST of NO08G02260 vs. NCBI_GenBank
Match: XP_012836910.1 (PREDICTED: uncharacterized protein LOC105957530 [Erythranthe guttata] >EYU37636.1 hypothetical protein MIMGU_mgv1a003531mg [Erythranthe guttata])

HSP 1 Score: 464.5 bits (1194), Expect = 5.600e-127
Identity = 252/458 (55.02%), Postives = 323/458 (70.52%), Query Frame = 0 
Query:  209 DLVRGGLVGVGAGVLALLLQGNWLHDHEVLSMCAIFCLGYVSIIFENIFEFNKAAVGLLMAVALWVIYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGAMTIVEIVDSHQGFRVVTDLIKTTSKKALMWTIGLLAFFMSSVLDNLTTTIVLLSLLRKLIPNPEVRKLFGALVVIAANAGGAWTPIGDLTTTMLWINGQISAFPTMRDLVLPSLVSLVISTYLLTWGMPNSDPEFEKEMAASQQNA----VTTELAPRGKLVFATGLAGLLSVPVFKALTGLPPYLGMLSALGVMWVLTDTIHAGESE-EELKVPAALAKIDVSGILFFFGILLSVGALDSAGILQSLASFLQTSIPSEKVIATVIGIFSAIIDNVPLVAATMSMYDINTTPMDAPLWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYAKKITASAFVGYMGGVGTYLAL 662
            D ++   +   AG  A  +  +W+ +++ L+M  +F LGY  IIFE    FNK+ VGLLMAV+LWVI +                              LLGAMTIVEIVD+HQGF++VTD I T   + L+W IG + FF+SSVLDNLT+TIV++SLLRKL+P  E RK+ GA+VVIAANAGGAWTPIGD+TTTMLWI+GQIS   TM+DLV+PS+VSL +   L++         F  E+    Q+A     T ++APRGKLVF+ G+  L+ VPVFK+LTGLPPY+GML  LGV+W+LTD IH GESE + LKVP AL++ID  G LFF GILLSV +L++AGIL+ LA++L + IP+ ++IA+ IG+ SAIIDNVPLVAATM MYD+ + P D+  WQLVAYCAGTGGS+L+IGSAAGVA MG+EK+DF WY KK+T  AF GY  G+  YLA+
Sbjct:  115 DSLKAFAILAAAGTGAGAINHSWVAENQDLAMALLFGLGYAGIIFEESLAFNKSGVGLLMAVSLWVIRS----IGAPSTEVAVSELSHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLQTMKDLVIPSIVSLAVPLALMS---------FTSEVNGKGQDAADVLATEQMAPRGKLVFSVGIGALVFVPVFKSLTGLPPYMGMLLGLGVLWILTDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILRELANYLDSHIPNIELIASSIGVVSAIIDNVPLVAATMGMYDLTSFPRDSEFWQLVAYCAGTGGSMLIIGSAAGVAFMGMEKIDFFWYFKKVTGFAFAGYAAGIAAYLAV 559
[Close]
BLAST of NO08G02260 vs. NCBI_GenBank
Match: PHT34610.1 (hypothetical protein CQW23_26410 [Capsicum baccatum])

HSP 1 Score: 464.2 bits (1193), Expect = 7.300e-127
Identity = 254/455 (55.82%), Postives = 322/455 (70.77%), Query Frame = 0 
Query:  209 DLVRGGLVGVGAGVLALLLQGNWLHDHEVLSMCAIFCLGYVSIIFENIFEFNKAAVGLLMAVALWVIYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGAMTIVEIVDSHQGFRVVTDLIKTTSKKALMWTIGLLAFFMSSVLDNLTTTIVLLSLLRKLIPNPEVRKLFGALVVIAANAGGAWTPIGDLTTTMLWINGQISAFPTMRDLVLPSLVSLVISTYLLT-WGMPNSDPEFEKEMAASQQNAVTTELAPRGKLVFATGLAGLLSVPVFKALTGLPPYLGMLSALGVMWVLTDTIHAGESE-EELKVPAALAKIDVSGILFFFGILLSVGALDSAGILQSLASFLQTSIPSEKVIATVIGIFSAIIDNVPLVAATMSMYDINTTPMDAPLWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYAKKITASAFVGYMGGVGTYLAL 662
            DL++   V   A    + +  +W+  ++ ++M  +F +GY+ IIFE    FNK+ VGLLMAV+LWV+ +                              LLGAMTIVEIVD+HQGF++VTD I T   K L+W +G + FF+SS+LDNLT+TIV++SLLRKL P  E RKL GA+VVIAANAGGAWTPIGD+TTTMLWI+GQIS  PTM+ L LPS+VSL +   LL+     N   E   ++ AS+Q      +APRG+LVFA GL  L+ VPVFKALTGLPPY+GML  LGV+W++TD IH GESE + LKVP AL++ID  G LFF GILLSV +L+SAGIL+ LA++L   IPS ++IA+ IG+ SAIIDNVPLVAATM MYD+++ P D+  WQLVAYCAGTGGS+LVIGSAAGVA MG+EKVDF WY +K++ SAF GY  G+  YLA+
Sbjct:  101 DLLKAFAVLAAAVTGTVAINQSWVAANQDIAMALLFGVGYMGIIFEESLAFNKSGVGLLMAVSLWVVRS----IGAPSNDIALSQLSHATAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPKTLLWVVGFVTFFLSSILDNLTSTIVMVSLLRKLAPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKGLFLPSVVSLAVPLALLSLTSEVNGKGENSADVLASEQ------MAPRGQLVFAVGLGTLVFVPVFKALTGLPPYMGMLLGLGVLWIITDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSVSSLESAGILRELANYLDAHIPSSELIASSIGVVSAIIDNVPLVAATMGMYDLSSFPQDSEFWQLVAYCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYMRKVSGSAFAGYAAGIAAYLAV 545
[Close]
BLAST of NO08G02260 vs. NCBI_GenBank
Match: PHT68506.1 (hypothetical protein T459_27993 [Capsicum annuum])

HSP 1 Score: 464.2 bits (1193), Expect = 7.300e-127
Identity = 254/455 (55.82%), Postives = 322/455 (70.77%), Query Frame = 0 
Query:  209 DLVRGGLVGVGAGVLALLLQGNWLHDHEVLSMCAIFCLGYVSIIFENIFEFNKAAVGLLMAVALWVIYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGAMTIVEIVDSHQGFRVVTDLIKTTSKKALMWTIGLLAFFMSSVLDNLTTTIVLLSLLRKLIPNPEVRKLFGALVVIAANAGGAWTPIGDLTTTMLWINGQISAFPTMRDLVLPSLVSLVISTYLLT-WGMPNSDPEFEKEMAASQQNAVTTELAPRGKLVFATGLAGLLSVPVFKALTGLPPYLGMLSALGVMWVLTDTIHAGESE-EELKVPAALAKIDVSGILFFFGILLSVGALDSAGILQSLASFLQTSIPSEKVIATVIGIFSAIIDNVPLVAATMSMYDINTTPMDAPLWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYAKKITASAFVGYMGGVGTYLAL 662
            DL++   V   A    + +  +W+  ++ ++M  +F +GY+ IIFE    FNK+ VGLLMAV+LWV+ +                              LLGAMTIVEIVD+HQGF++VTD I T   K L+W +G + FF+SS+LDNLT+TIV++SLLRKL P  E RKL GA+VVIAANAGGAWTPIGD+TTTMLWI+GQIS  PTM+ L LPS+VSL +   LL+     N   E   ++ AS+Q      +APRG+LVFA GL  L+ VPVFKALTGLPPY+GML  LGV+W++TD IH GESE + LKVP AL++ID  G LFF GILLSV +L+SAGIL+ LA++L   IPS ++IA+ IG+ SAIIDNVPLVAATM MYD+++ P D+  WQLVAYCAGTGGS+LVIGSAAGVA MG+EKVDF WY +K++ SAF GY  G+  YLA+
Sbjct:   96 DLLKAFAVLAAAVTGTVAINQSWVAANQDIAMALLFGVGYMGIIFEESLAFNKSGVGLLMAVSLWVVRS----IGAPSNDIALSQLSHATAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPKTLLWVVGFVTFFLSSILDNLTSTIVMVSLLRKLAPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKGLFLPSVVSLAVPLALLSLTSEVNGKGENSADVLASEQ------MAPRGQLVFAVGLGTLVFVPVFKALTGLPPYMGMLLGLGVLWIITDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSVSSLESAGILRELANYLDAHIPSSELIASSIGVVSAIIDNVPLVAATMGMYDLSSFPQDSEFWQLVAYCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYMRKVSGSAFAGYAAGIAAYLAV 540
[Close]
BLAST of NO08G02260 vs. NCBI_GenBank
Match: PHU03183.1 (hypothetical protein BC332_28434 [Capsicum chinense])

HSP 1 Score: 464.2 bits (1193), Expect = 7.300e-127
Identity = 254/455 (55.82%), Postives = 322/455 (70.77%), Query Frame = 0 
Query:  209 DLVRGGLVGVGAGVLALLLQGNWLHDHEVLSMCAIFCLGYVSIIFENIFEFNKAAVGLLMAVALWVIYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGAMTIVEIVDSHQGFRVVTDLIKTTSKKALMWTIGLLAFFMSSVLDNLTTTIVLLSLLRKLIPNPEVRKLFGALVVIAANAGGAWTPIGDLTTTMLWINGQISAFPTMRDLVLPSLVSLVISTYLLT-WGMPNSDPEFEKEMAASQQNAVTTELAPRGKLVFATGLAGLLSVPVFKALTGLPPYLGMLSALGVMWVLTDTIHAGESE-EELKVPAALAKIDVSGILFFFGILLSVGALDSAGILQSLASFLQTSIPSEKVIATVIGIFSAIIDNVPLVAATMSMYDINTTPMDAPLWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYAKKITASAFVGYMGGVGTYLAL 662
            DL++   V   A    + +  +W+  ++ ++M  +F +GY+ IIFE    FNK+ VGLLMAV+LWV+ +                              LLGAMTIVEIVD+HQGF++VTD I T   K L+W +G + FF+SS+LDNLT+TIV++SLLRKL P  E RKL GA+VVIAANAGGAWTPIGD+TTTMLWI+GQIS  PTM+ L LPS+VSL +   LL+     N   E   ++ AS+Q      +APRG+LVFA GL  L+ VPVFKALTGLPPY+GML  LGV+W++TD IH GESE + LKVP AL++ID  G LFF GILLSV +L+SAGIL+ LA++L   IPS ++IA+ IG+ SAIIDNVPLVAATM MYD+++ P D+  WQLVAYCAGTGGS+LVIGSAAGVA MG+EKVDF WY +K++ SAF GY  G+  YLA+
Sbjct:   96 DLLKAFAVLAAAVTGTVAINQSWVAANQDIAMALLFGVGYMGIIFEESLAFNKSGVGLLMAVSLWVVRS----IGAPSNDIALSQLSRATAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPKTLLWVVGFVTFFLSSILDNLTSTIVMVSLLRKLAPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKGLFLPSVVSLAVPLALLSLTSEVNGKGENSADVLASEQ------MAPRGQLVFAVGLGTLVFVPVFKALTGLPPYMGMLLGLGVLWIITDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSVSSLESAGILRELANYLDAHIPSSELIASSIGVVSAIIDNVPLVAATMGMYDLSSFPQDSEFWQLVAYCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYMRKVSGSAFAGYAAGIAAYLAV 540
[Close]
BLAST of NO08G02260 vs. NCBI_GenBank
Match: XP_022984304.1 (sodium/proton antiporter 1-like [Cucurbita maxima])

HSP 1 Score: 464.2 bits (1193), Expect = 7.300e-127
Identity = 249/478 (52.09%), Postives = 329/478 (68.83%), Query Frame = 0 
Query:  209 DLVRGGLVGVGAGVLALLLQGNWLHDHEVLSMCAIFCLGYVSIIFENIFEFNKAAVGLLMAVALWVIYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGAMTIVEIVDSHQGFRVVTDLIKTTSKKALMWTIGLLAFFMSSVLDNLTTTIVLLSLLRKLIPNPEVRKLFGALVVIAANAGGAWTPIGDLTTTMLWINGQISAFPTMRDLVLPSLVSLVI--STYLLTWGMPNSDPEFEKEMAASQQNAVTTELAPRGKLVFATGLAGLLSVPVFKALTGLPPYLGMLSALGVMWVLTDTIHAGESE-EELKVPAALAKIDVSGILFFFGILLSVGALDSAGILQSLASFLQTSIPSEKVIATVIGIFSAIIDNVPLVAATMSMYDINTTPMDAPLWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYAKKITASAFVGYMGGVGTYLAL-KFGLGSAVSAAVLPIVASFFD 683
            DLV+   +   A    + +  +W+  ++ L+M  +F +GY  IIFE    FNK+ VGLLMAV LWV+ +                              LLGAMTIVEIVD+HQGF++VTD I T   + L+W IG++ FF+SS+LDNLTTTI+++SLLRKL+P  E RKL GA++VIAANAGGAWTPIGD+TTTMLWI+GQIS  PT++DL +PS VSL++  S   LT  +     +F   MA+ Q       +APRGKLVF+ G+  L+SVPVFKALTGLPPY+GML  LG++W+LTD IH GESE ++LKVP AL++ID  G LFF GILLSV +L++AGIL+ LA++L   IP+ ++IA+ +G+ SAIIDNVPLVAATM MYD+++   D+  WQL+A+CAGTGGS+L+IGSAAGVA MG+EKVDF WY +K++  AF GY  G+  YLAL         + A +P +  F +
Sbjct:  112 DLVKAFAILAAALTGIVAINHSWVAANQDLAMVLLFSIGYAGIIFEEALAFNKSGVGLLMAVGLWVVRS----IGAPSTEIAASELTHATAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDSITTRKPRTLLWVIGIVTFFLSSILDNLTTTIIMVSLLRKLVPPSEYRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTMPTLKDLFIPSAVSLIVPLSLLSLTSEVNGKGQDFSNVMASEQ-------MAPRGKLVFSVGVGALVSVPVFKALTGLPPYMGMLLGLGILWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILRELANYLDAHIPNAELIASAVGVISAIIDNVPLVAATMGMYDLSSFAQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLNTSLPTTIAEMPTIMGFIN 578
[Close]
BLAST of NO08G02260 vs. NCBI_GenBank
Match: XP_022922592.1 (sodium/proton antiporter 1-like [Cucurbita moschata])

HSP 1 Score: 463.4 bits (1191), Expect = 1.200e-126
Identity = 249/478 (52.09%), Postives = 329/478 (68.83%), Query Frame = 0 
Query:  209 DLVRGGLVGVGAGVLALLLQGNWLHDHEVLSMCAIFCLGYVSIIFENIFEFNKAAVGLLMAVALWVIYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGAMTIVEIVDSHQGFRVVTDLIKTTSKKALMWTIGLLAFFMSSVLDNLTTTIVLLSLLRKLIPNPEVRKLFGALVVIAANAGGAWTPIGDLTTTMLWINGQISAFPTMRDLVLPSLVSLVI--STYLLTWGMPNSDPEFEKEMAASQQNAVTTELAPRGKLVFATGLAGLLSVPVFKALTGLPPYLGMLSALGVMWVLTDTIHAGESE-EELKVPAALAKIDVSGILFFFGILLSVGALDSAGILQSLASFLQTSIPSEKVIATVIGIFSAIIDNVPLVAATMSMYDINTTPMDAPLWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYAKKITASAFVGYMGGVGTYLAL-KFGLGSAVSAAVLPIVASFFD 683
            DLV+   +   A    + +  +W+  ++ L+M  +F +GY  IIFE    FNK+ VGLLMAV LWV+ +                              LLGAMTIVEIVD+HQGF++VTD I T   + L+W IG++ FF+SS+LDNLTTTI+++SLLRKL+P  E RKL GA++VIAANAGGAWTPIGD+TTTMLWI+GQIS  PT++DL +PS VSL++  S   LT  +     +F   MA+ Q       +APRGKLVF+ G+  L+SVPVFKALTGLPPY+GML  LG++W+LTD IH GESE ++LKVP AL++ID  G LFF GILLSV +L++AGIL+ LA++L   IP+ ++IA+ +G+ SAIIDNVPLVAATM MYD+++   D+  WQL+A+CAGTGGS+L+IGSAAGVA MG+EKVDF WY +K++  AF GY  G+  YLAL         + A +P +  F +
Sbjct:  112 DLVKAFAILAAALTGIVAINHSWVAANQDLAMVLLFSIGYAGIIFEEALAFNKSGVGLLMAVGLWVVRS----IGAPSTEIAASELTHATAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDSITTRKPRTLLWVIGIVTFFLSSILDNLTTTIIMVSLLRKLVPPSEYRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTMPTLKDLFIPSAVSLIVPLSLLSLTSEVNGKGQDFSNVMASEQ-------MAPRGKLVFSVGVGALVSVPVFKALTGLPPYMGMLLGLGILWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILRELANYLDAHIPNTELIASAVGVISAIIDNVPLVAATMGMYDLSSFAQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLNTSLPTTIAEVPSIMGFIN 578
[Close]
BLAST of NO08G02260 vs. NCBI_GenBank
Match: XP_023552130.1 (sodium/proton antiporter 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 463.4 bits (1191), Expect = 1.200e-126
Identity = 249/478 (52.09%), Postives = 329/478 (68.83%), Query Frame = 0 
Query:  209 DLVRGGLVGVGAGVLALLLQGNWLHDHEVLSMCAIFCLGYVSIIFENIFEFNKAAVGLLMAVALWVIYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGAMTIVEIVDSHQGFRVVTDLIKTTSKKALMWTIGLLAFFMSSVLDNLTTTIVLLSLLRKLIPNPEVRKLFGALVVIAANAGGAWTPIGDLTTTMLWINGQISAFPTMRDLVLPSLVSLVI--STYLLTWGMPNSDPEFEKEMAASQQNAVTTELAPRGKLVFATGLAGLLSVPVFKALTGLPPYLGMLSALGVMWVLTDTIHAGESE-EELKVPAALAKIDVSGILFFFGILLSVGALDSAGILQSLASFLQTSIPSEKVIATVIGIFSAIIDNVPLVAATMSMYDINTTPMDAPLWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYAKKITASAFVGYMGGVGTYLAL-KFGLGSAVSAAVLPIVASFFD 683
            DLV+   +   A    + +  +W+  ++ L+M  +F +GY  IIFE    FNK+ VGLLMAV LWV+ +                              LLGAMTIVEIVD+HQGF++VTD I T   + L+W IG++ FF+SS+LDNLTTTI+++SLLRKL+P  E RKL GA++VIAANAGGAWTPIGD+TTTMLWI+GQIS  PT++DL +PS VSL++  S   LT  +     +F   MA+ Q       +APRGKLVF+ G+  L+SVPVFKALTGLPPY+GML  LG++W+LTD IH GESE ++LKVP AL++ID  G LFF GILLSV +L++AGIL+ LA++L   IP+ ++IA+ +G+ SAIIDNVPLVAATM MYD+++   D+  WQL+A+CAGTGGS+L+IGSAAGVA MG+EKVDF WY +K++  AF GY  G+  YLAL         + A +P +  F +
Sbjct:  112 DLVKAFAILAAALTGIVAINHSWVAANQDLAMVLLFSIGYAGIIFEEALAFNKSGVGLLMAVGLWVVRS----IGAPSTEIAASELTHATAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDSITTRKPRTLLWVIGIVTFFLSSILDNLTTTIIMVSLLRKLVPPSEYRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTMPTLKDLFIPSAVSLIVPLSLLSLTSEVNGKGQDFSNVMASEQ-------MAPRGKLVFSVGVGALVSVPVFKALTGLPPYMGMLLGLGILWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILRELANYLDAHIPNAELIASAVGVISAIIDNVPLVAATMGMYDLSSFAQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLNTSLPTTIAEVPSIMGFIN 578
[Close]
BLAST of NO08G02260 vs. NCBI_GenBank
Match: XP_002298746.1 (sodium/proton antiporter 1 [Populus trichocarpa] >PNT57457.1 hypothetical protein POPTR_001G301000v3 [Populus trichocarpa])

HSP 1 Score: 463.0 bits (1190), Expect = 1.600e-126
Identity = 252/474 (53.16%), Postives = 330/474 (69.62%), Query Frame = 0 
Query:  209 DLVRGGLVGVGAGVLALLLQGNWLHDHEVLSMCAIFCLGYVSIIFENIFEFNKAAVGLLMAVALWVIYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGAMTIVEIVDSHQGFRVVTDLIKTTSKKALMWTIGLLAFFMSSVLDNLTTTIVLLSLLRKLIPNPEVRKLFGALVVIAANAGGAWTPIGDLTTTMLWINGQISAFPTMRDLVLPSLVSLVI--STYLLTWGMPNSDPEFEKEMAASQQNAVTTELAPRGKLVFATGLAGLLSVPVFKALTGLPPYLGMLSALGVMWVLTDTIHAGESE-EELKVPAALAKIDVSGILFFFGILLSVGALDSAGILQSLASFLQTSIPSEKVIATVIGIFSAIIDNVPLVAATMSMYDINTTPMDAPLWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYAKKITASAFVGYMGGVGTYLAL-KFGLGSAVSAAVLPIVA 679
            DLV+   V   A   A+ +  +W+  ++ L+M  +F +GY  IIFE    FNK+ VGLLMAV+LWV+ +                              LLGAMTIVEIVD+HQGF++VTD+I T   + L+W +G + F +SSVLDNLT+TIV++SLLRKL+P  E RKL GA+VVIAANAGGAWTPIGD+TTTMLWI+GQIS  PTM+DL++PS+VSL +  S   LT  +    P+    +A+ Q       +APRG+LVF+ G+  L+ VPVFKALTGLPP++GML  LGV+W+LTD IH GESE ++LKVP AL++ID  G LFF GILLSV +L++AG+L+ LA++L   IP+ ++IA+ IG+ SAIIDNVPLVAATM MYD+++ P D   WQLVAYCAGTGGS+LVIGSAAGVA MG+EKVDF WY +K++  AF GY  G+  YL +  F +    + A LP ++
Sbjct:  122 DLVKALAVFAAAATGAVAINHSWVAANQDLAMALLFGIGYAGIIFEEFLAFNKSGVGLLMAVSLWVVRS----IGAPSPDIAVSELTHASAEVSQIVFFLLGAMTIVEIVDAHQGFKLVTDIITTRKPRTLLWVVGFVTFLLSSVLDNLTSTIVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKDLLVPSVVSLAVPLSLLSLTSEVNGKGPDTPNVLASEQ-------MAPRGQLVFSVGIGALIFVPVFKALTGLPPFMGMLLGLGVLWILTDAIHYGESEGQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLRELANYLDAHIPNIELIASAIGVVSAIIDNVPLVAATMGMYDLSSFPQDHEFWQLVAYCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLTVHNFSISLPTTLAELPFLS 584
[Close]
BLAST of NO08G02260 vs. NCBI_GenBank
Match: XP_010538620.1 (PREDICTED: uncharacterized protein LOC104812909 [Tarenaya hassleriana])

HSP 1 Score: 462.6 bits (1189), Expect = 2.100e-126
Identity = 258/476 (54.20%), Postives = 329/476 (69.12%), Query Frame = 0 
Query:  209 DLVRGGLVGVGAGVLALLLQGNWLHDHEVLSMCAIFCLGYVSIIFENIFEFNKAAVGLLMAVALWVIYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGAMTIVEIVDSHQGFRVVTDLIKTTSKKALMWTIGLLAFFMSSVLDNLTTTIVLLSLLRKLIPNPEVRKLFGALVVIAANAGGAWTPIGDLTTTMLWINGQISAFPTMRDLVLPSLVSLVISTYLLT-WGMPNSDPEFEKEMAASQQNAVTTELAPRGKLVFATGLAGLLSVPVFKALTGLPPYLGMLSALGVMWVLTDTIHAGESE-EELKVPAALAKIDVSGILFFFGILLSVGALDSAGILQSLASFLQTSIPSEKVIATVIGIFSAIIDNVPLVAATMSMYDINTTPMDAPLWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYAKKITASAFVGYMGGVGTYLA---LKFGLGSAVSAAVLPIVAS 680
            D+V+   +   A      +  +W+  ++ L+M  +F +GY  IIFE    FNK+ VGLLMAV+LWV+ +                              LLGAMTIVEIVD+HQGF++VTD I T   K L+W IG + FF+SSVLDNLT+TIV++SLLRKL+P  E RKL GA+VVIAANAGGAWTPIGD+TTTMLWI+GQIS  PTM+ L+LPS VSL +   L++     N   +    + AS+Q      +APRG+LVFA G+  L+SVPVFKALTGLPPY+GML  LGV+W+LTD IH GESE + LKVP AL++ID  G LFF GILLSV +L+SAGIL+ +A++L + IPS ++IA+ IG+ SAIIDNVPLVAATM MYD+ + P D+  WQL+AYCAGTGGS+L+IGSAAGVA MG+EKVDF WY +K++  AF GY  G+  YLA   L F L + V  A +P + S
Sbjct:  116 DIVKAIAIFAAALTGTAAINHSWVAANQDLAMALLFGIGYAGIIFEESLAFNKSGVGLLMAVSLWVVRS----IGAPSTEIAVSELEHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPKTLLWVIGFVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKGLLLPSAVSLAVPLALMSLTSEANGKGQDSPNVLASEQ------MAPRGQLVFAVGIGALISVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSVSSLESAGILREIANYLDSHIPSVELIASAIGVVSAIIDNVPLVAATMGMYDLTSFPQDSEFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIVAYLAAHNLHFSLPTTV--AQIPFLGS 579
[Close]
BLAST of NO08G02260 vs. NCBI_GenBank
Match: XP_019166214.1 (PREDICTED: sodium/proton antiporter 1 isoform X1 [Ipomoea nil])

HSP 1 Score: 462.6 bits (1189), Expect = 2.100e-126
Identity = 250/473 (52.85%), Postives = 331/473 (69.98%), Query Frame = 0 
Query:  209 DLVRGGLVGVGAGVLALLLQGNWLHDHEVLSMCAIFCLGYVSIIFENIFEFNKAAVGLLMAVALWVIYAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGAMTIVEIVDSHQGFRVVTDLIKTTSKKALMWTIGLLAFFMSSVLDNLTTTIVLLSLLRKLIPNPEVRKLFGALVVIAANAGGAWTPIGDLTTTMLWINGQISAFPTMRDLVLPSLVSLVISTYLLTWGMP-NSDPEFEKEMAASQQNAVTTELAPRGKLVFATGLAGLLSVPVFKALTGLPPYLGMLSALGVMWVLTDTIHAGESE-EELKVPAALAKIDVSGILFFFGILLSVGALDSAGILQSLASFLQTSIPSEKVIATVIGIFSAIIDNVPLVAATMSMYDINTTPMDAPLWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYAKKITASAFVGYMGGVGTYLAL-KFGLGSAVSAAVLPIVA 679
            DL++   +   AG  AL +  +W+  ++ ++M  +F +GYV IIFE    FNK+ VGLLMAV+LWV+ +                              LLGAMTIVEIVD+HQGF++VTD I T   + L+W +G + FF+SSVLDNLT+TIV++SLLRKL P  E RKL GA+VVIAANAGGAWTPIGD+TTTMLWI+GQIS  PTM+DL +PS +SL +   L++     N   +   ++ AS+      ++APRG+LVF+ G+  L+ VP+FKALTGLPPY+GML  LGV+W+LTD IH GESE + LKVP AL++ID  G+LFF GILLSV +L++AGIL+ LA++L T I + ++IA+ IG+ SAIIDNVPLVAATM MYD+++ P D+  WQLVAYCAGTGGS+L+IGSAAGVA MG+EKV+F WY +K++  AF GY  G+  YLAL    L    + A +P ++
Sbjct:  103 DLLKALAILAAAGTGALAINHSWVAANQDIAMALLFAIGYVGIIFEESLAFNKSGVGLLMAVSLWVVRS----IGAPSTDIALTELSHATGEISEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVVGFVTFFLSSVLDNLTSTIVMVSLLRKLAPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKDLFVPSAISLAVPLALMSLASEVNGKGQNSADVLASE------KMAPRGQLVFSVGIGALVFVPIFKALTGLPPYIGMLLGLGVLWILTDAIHYGESERQHLKVPQALSRIDTQGVLFFLGILLSVSSLEAAGILRELANYLDTHIANTELIASAIGVVSAIIDNVPLVAATMGMYDLSSIPKDSEFWQLVAYCAGTGGSMLIIGSAAGVAFMGMEKVNFFWYLRKVSGFAFAGYAAGIAAYLALHNLNLSLPTTLAEVPFLS 565
The following BLAST results are available for this feature:
BLAST of NO08G02260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_012836910.15.600e-12755.02PREDICTED: uncharacterized protein LOC105957530 [E... [more]
PHT34610.17.300e-12755.82hypothetical protein CQW23_26410 [Capsicum baccatu... [more]
PHT68506.17.300e-12755.82hypothetical protein T459_27993 [Capsicum annuum][more]
PHU03183.17.300e-12755.82hypothetical protein BC332_28434 [Capsicum chinens... [more]
XP_022984304.17.300e-12752.09sodium/proton antiporter 1-like [Cucurbita maxima][more]
XP_022922592.11.200e-12652.09sodium/proton antiporter 1-like [Cucurbita moschat... [more]
XP_023552130.11.200e-12652.09sodium/proton antiporter 1-like [Cucurbita pepo su... [more]
XP_002298746.11.600e-12653.16sodium/proton antiporter 1 [Populus trichocarpa] >... [more]
XP_010538620.12.100e-12654.20PREDICTED: uncharacterized protein LOC104812909 [T... [more]
XP_019166214.12.100e-12652.85PREDICTED: sodium/proton antiporter 1 isoform X1 [... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008808NSK008808Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02260.1NO08G02260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582584gene_3556Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g132gene3836Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02260.1NO08G02260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02260 ID=NO08G02260|Name=NO08G02260|organism=Nannochloropsis oceanica|type=gene|length=2079bp
ATGATGGCCGAGAGCTTGCCTGTCGCACAGCGGGTCCAGGCGGAGCTCAT
ACCCTCGGAACCCTTCAGGCCCGACTTAGGCGTGGGACGCGACGCCAAAC
TGACCAAGGTTTTGGAGCTGAACGACGGTGCCGTGGACTTCGTGCGCGTT
AATATCAATGCGTTGACGCTGTCGGCTGTGAAAAAGATGAATGATAAGGG
CGCGGATTGCTGCCTCGTCTTTGACATGGACGGTGGCTTGGCGGGGATTT
TCACGGAGCGTGACTACATTCGCAAGATTGTTGAGGCCAACCGCGCTACA
AAGGAGACTCCCATCGCCGAGGTCATGACGTCGGCTGATAAAATCGTGAG
CGCACCGCCTGAACTGACCGTCGGTGAATGCATGGCAATGATGGTTCAAA
ACAAGATCCGGCACGTGCCTATTCGCGCCATGCCCCAAGGTGAGGTGATG
GGCGTGATTTCTACAACTGACCTGGTCAACACGATGAAGCGCGATGACGA
GAGCTTGGCGGGGGCGTTGCCTATTGGCGCCCTGGAGCCCGCTCTGATCA
ATGACTTGCTCAGCCGCACCCGCGAGCGGGCCAATGAGATGGCTGTCAAG
GGTGGGCCGAAGCTTGGGGCGCAGGATTTAGTGCGTGGCGGTTTGGTGGG
TGTGGGTGCAGGGGTGCTAGCTTTGTTGCTGCAGGGCAACTGGTTGCATG
ACCACGAGGTGCTTTCGATGTGTGCGATTTTCTGCTTGGGTTATGTGAGT
ATCATCTTTGAGAATATTTTTGAATTCAATAAGGCGGCCGTAGGTCTGTT
GATGGCCGTAGCACTCTGGGTCATTTATGCGGGCACGGCAGGCGGGGCGG
GTATTGCATCGATTGGCGCATTAAAGGAGCTGTCGGAGCACGTGGCCGAG
GTGTCGGAGATCATTTTTTTCTTGCTGGGCGCCATGACGATTGTGGAGAT
TGTGGACTCGCATCAAGGCTTCCGCGTGGTGACAGACCTGATCAAGACCA
CCAGTAAGAAGGCCCTTATGTGGACTATTGGCCTCTTGGCATTTTTCATG
AGCTCCGTGCTCGACAACCTGACGACCACCATTGTTCTGCTCTCACTACT
CCGCAAGCTTATTCCAAATCCCGAGGTCCGCAAGCTCTTCGGTGCTTTGG
TAGTGATAGCCGCCAATGCCGGCGGGGCCTGGACGCCCATCGGCGACCTT
ACCACGACCATGCTGTGGATCAATGGTCAGATCTCCGCCTTTCCCACCAT
GCGGGACCTGGTCTTACCATCCCTCGTCTCGCTCGTCATCAGCACCTATC
TCCTCACTTGGGGCATGCCGAATTCGGACCCGGAATTCGAGAAAGAAATG
GCGGCCAGCCAACAAAACGCCGTCACCACTGAGCTGGCCCCCCGTGGTAA
GCTCGTCTTTGCCACGGGCCTAGCTGGCCTTCTAAGTGTTCCTGTTTTCA
AGGCCTTGACGGGCCTACCGCCCTACCTGGGCATGCTCTCCGCTTTGGGG
GTTATGTGGGTCCTGACTGATACCATCCACGCCGGTGAGTCAGAAGAGGA
GCTGAAGGTGCCCGCAGCGTTGGCCAAGATTGACGTATCAGGGATTTTGT
TTTTCTTTGGTATTTTGCTGTCTGTGGGCGCACTGGACTCGGCAGGCATC
CTGCAGTCTCTGGCCTCCTTTCTCCAGACAAGTATTCCCTCGGAAAAAGT
TATCGCCACTGTCATTGGTATCTTCAGCGCCATAATTGATAATGTGCCCT
TGGTGGCTGCCACTATGTCGATGTACGACATCAACACCACGCCCATGGAT
GCCCCGCTTTGGCAGCTTGTTGCCTATTGCGCCGGCACAGGTGGTTCTCT
CCTGGTCATTGGAAGTGCTGCCGGCGTGGCTCTGATGGGCTTGGAGAAGG
TGGACTTCTTGTGGTATGCCAAGAAGATCACGGCCTCGGCTTTTGTGGGA
TACATGGGCGGCGTTGGCACCTATTTGGCGTTGAAATTTGGACTGGGTTC
GGCAGTGAGTGCTGCAGTTTTGCCCATCGTTGCATCCTTTTTTGATGGAA
GGATTCCCCTGATTGGCGGCGGCATGTAA
back to top

protein sequence of NO08G02260.1

>NO08G02260.1-protein ID=NO08G02260.1-protein|Name=NO08G02260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=693bp
MMAESLPVAQRVQAELIPSEPFRPDLGVGRDAKLTKVLELNDGAVDFVRV
NINALTLSAVKKMNDKGADCCLVFDMDGGLAGIFTERDYIRKIVEANRAT
KETPIAEVMTSADKIVSAPPELTVGECMAMMVQNKIRHVPIRAMPQGEVM
GVISTTDLVNTMKRDDESLAGALPIGALEPALINDLLSRTRERANEMAVK
GGPKLGAQDLVRGGLVGVGAGVLALLLQGNWLHDHEVLSMCAIFCLGYVS
IIFENIFEFNKAAVGLLMAVALWVIYAGTAGGAGIASIGALKELSEHVAE
VSEIIFFLLGAMTIVEIVDSHQGFRVVTDLIKTTSKKALMWTIGLLAFFM
SSVLDNLTTTIVLLSLLRKLIPNPEVRKLFGALVVIAANAGGAWTPIGDL
TTTMLWINGQISAFPTMRDLVLPSLVSLVISTYLLTWGMPNSDPEFEKEM
AASQQNAVTTELAPRGKLVFATGLAGLLSVPVFKALTGLPPYLGMLSALG
VMWVLTDTIHAGESEEELKVPAALAKIDVSGILFFFGILLSVGALDSAGI
LQSLASFLQTSIPSEKVIATVIGIFSAIIDNVPLVAATMSMYDINTTPMD
APLWQLVAYCAGTGGSLLVIGSAAGVALMGLEKVDFLWYAKKITASAFVG
YMGGVGTYLALKFGLGSAVSAAVLPIVASFFDGRIPLIGGGM*
back to top
Synonyms
Publications