NO08G02070, NO08G02070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G02070 vs. NCBI_GenBank
Match: EWM26740.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 194.1 bits (492), Expect = 9.800e-46 Identity = 165/451 (36.59%), Postives = 225/451 (49.89%), Query Frame = 0 Query: 48 ILFLKGMSLYGKSWKKISEIVKTRSVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNMERRGTIKKSPPPAGILKPASISTSSSSELFVPKAKRRVQLPAGYVLNREXXXXXXXXXXXXXXXXXXXXXXXFKVQDASIRALMPMSSSFPL---LNLPAGSTNCAVVSHSYPTLSNSSALYTMQQLMAPQEPEIGGQLLSPSSHARACFIAALARGAGQLGHELTTL----PLSSGSQPEISTQSNPLSSASDENNGK-RPPIFESVTAPAGATSSSTFSTARGPTAVPIEQPPHHRLSACVAPQQ----PSVLPAAIASPACHMMAETSSSSCSSFNLSSSAPGQYNKVPDPLEELMQTLTRGKLSXXXXXXXXXXXXXGPEVNELPSMHDMQVWELTEGHARPFSLRSWDEDDFDSMSSSSS----SDHVSCSPGSVSDFRYMPAA 483 +LFL+G+ L+GKSWKKISEIV TR+VVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDN ERRGT KKS L ++S +S+SE V + KR+ PA ++ VQ ++R P++ + P PAG V P Y MQ M + G L+SPSS RA F L+ G + L + + E++ Q + L +E + +P ++ + PAG ++ P AVP Q H ++ VAPQQ PS + + + A H+ + S + N PL+ELMQ+L++ LS PEV ++PSMHD+ +W+L H+RP SL SWDE+ FD +S+SSS +HV C P +S+ +Y AA Sbjct: 1 MLFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNTERRGTSKKSS-----LSTETVSFTSTSESSVLEQKRQKNEPAAHLPG--------------------------PVQHTTVRPFAPVTRAAPSGCPPTAPAGFVPWMV----GPYACVPPTYYNMQ--MMAHGYDFGAPLVSPSSQYRASFPNPLSAPGGNCQEQDLGLNAPQSVRMPLEAEMAAQIHYLGIDDEETIAQNQPNSYKRLRVPAGLAMAT-------PAAVPTAQSSHCKV--YVAPQQSCTSPSDMTPTLTASALHLPPQGSLCPFMTSN--------------PLDELMQSLSQENLS---SSCSSTSPSIAPEV-DVPSMHDILIWDLNGKHSRPSSLSSWDEEGFDGVSTSSSPASIDNHVVCQPPDLSELQYAKAA 387
BLAST of NO08G02070 vs. NCBI_GenBank
Match: EWM29405.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 114.8 bits (286), Expect = 7.600e-22 Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 0 Query: 14 SSSQASASRAHFVPSRT----RQPSVKKDPGRWTAEEHILFLKGMSLYGKSWKKISEIVKTRSVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGV 107 S S S + A +PS + R S + PGRW EEH+LFLKG+ +YGKSWKKIS+IVKTR+VVQIRTHAQKYLIK+EKA+K G G +MM+GK + Sbjct: 130 SLSPMSPAAAPDIPSTSPPSKRDSSPRDSPGRWNEEEHLLFLKGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGKAI 226
BLAST of NO08G02070 vs. NCBI_GenBank
Match: XP_002184266.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44444.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 95.9 bits (237), Expect = 3.600e-16 Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 0 Query: 18 ASASRAHFVPSRTRQPSVK-----------------KDPGRWTAEEHILFLKGMSLYGKSWKKISEIVKTRSVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKG 106 AS S AH V S+++Q S ++ GRWTAEEH LFL+G+ +GK WKKI+ ++K+R+VVQIRTHAQKY KL KAR+ G +G + M+G+G Sbjct: 79 ASVSTAHSVTSKSKQNSTPPVDMATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRG 183
BLAST of NO08G02070 vs. NCBI_GenBank
Match: EWM30452.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 95.9 bits (237), Expect = 3.600e-16 Identity = 43/69 (62.32%), Postives = 58/69 (84.06%), Query Frame = 0 Query: 36 KKDPGRWTAEEHILFLKGMSLYGKSWKKISEIVKTRSVVQIRTHAQKYLIKLEKARKAGHQG-VLMMDG 104 +++ GRWT EEH+LFLKG+ ++GK WKKI++++KTR+VVQIRTHAQKY KL KA+K GH G +L M+G Sbjct: 97 RENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEG 165
BLAST of NO08G02070 vs. NCBI_GenBank
Match: XP_002184267.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44445.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 93.6 bits (231), Expect = 1.800e-15 Identity = 49/105 (46.67%), Postives = 67/105 (63.81%), Query Frame = 0 Query: 18 ASASRAHFVPSRTRQPSVK-----------------KDPGRWTAEEHILFLKGMSLYGKSWKKISEIVKTRSVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKG 106 A S AH V S+++Q S ++ GRWTAEEH LFL+G+ +GK WKKI+ ++K+R+VVQIRTHAQKY KL KAR+ G +G + M+G+G Sbjct: 79 ALVSTAHSVTSKSKQNSTPPVDMATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRG 183
BLAST of NO08G02070 vs. NCBI_GenBank
Match: GAX28359.1 (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 92.4 bits (228), Expect = 4.000e-15 Identity = 41/69 (59.42%), Postives = 56/69 (81.16%), Query Frame = 0 Query: 37 KDPGRWTAEEHILFLKGMSLYGKSWKKISEIVKTRSVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKG 106 ++ GRWTAEEH LFL+G+ +GK WKKI+ ++K+R+VVQIRTHAQKY KL KAR+ G +G + M+G+G Sbjct: 97 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEGRG 165
BLAST of NO08G02070 vs. NCBI_GenBank
Match: GAX24276.1 (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 92.4 bits (228), Expect = 4.000e-15 Identity = 41/69 (59.42%), Postives = 56/69 (81.16%), Query Frame = 0 Query: 37 KDPGRWTAEEHILFLKGMSLYGKSWKKISEIVKTRSVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKG 106 ++ GRWTAEEH LFL+G+ +GK WKKI+ ++K+R+VVQIRTHAQKY KL KAR+ G +G + M+G+G Sbjct: 96 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEGRG 164
BLAST of NO08G02070 vs. NCBI_GenBank
Match: CBJ27465.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 92.0 bits (227), Expect = 5.300e-15 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0 Query: 37 KDPGRWTAEEHILFLKGMSLYGKSWKKISEIVKTRSVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKG 106 K+ GRWT +EH LFL+G+ L+GK WKKI+ ++KTR+VVQIRTHAQKY K+ KA++ G G + MD KG Sbjct: 4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKG 72
BLAST of NO08G02070 vs. NCBI_GenBank
Match: EJK60893.1 (hypothetical protein THAOC_18691 [Thalassiosira oceanica]) HSP 1 Score: 84.7 bits (208), Expect = 8.400e-13 Identity = 40/69 (57.97%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 26 VPSRTRQPSVKKDPGRWTAEEHILFLKGMSLYGKSWKKISEIVKTRSVVQIRTHAQKYLIKLEKARKAG 95 +P+ +RQ ++ GRWTAEEH LFL+G+ +GK WKKI+ ++K+R+VVQIRTHAQKY KL KAR++G Sbjct: 300 MPASSRQ---SENTGRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAKARQSG 365
BLAST of NO08G02070 vs. NCBI_GenBank
Match: XP_002292776.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89972.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 84.7 bits (208), Expect = 8.400e-13 Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 0 Query: 16 SQASASRAHFVPSRTRQPSVKKDPGRWTAEEHILFLKGMSLYGKSWKKISEIVKTRSVVQIRTHAQKYLIKLEKARKAGHQGVLMM-DGKGVDNME 111 S + + + V + + ++ GRWTAEEH LFL+G+ +GK WKKI+ ++K+R+VVQIRTHAQKY KL KAR G+ M+ G G D+ E Sbjct: 395 SSSGSPSGNTVSTLNPNTNAVENTGRWTAEEHRLFLQGLEQHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKARAGDGSGIPMIGGGAGEDSPE 490 The following BLAST results are available for this feature:
BLAST of NO08G02070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02070 ID=NO08G02070|Name=NO08G02070|organism=Nannochloropsis oceanica|type=gene|length=5864bpback to top protein sequence of NO08G02070.2 >NO08G02070.2-protein ID=NO08G02070.2-protein|Name=NO08G02070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=483bpback to top protein sequence of NO08G02070.1 >NO08G02070.1-protein ID=NO08G02070.1-protein|Name=NO08G02070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=499bpback to top Synonyms
Publications
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