NO08G01950, NO08G01950 (gene) Nannochloropsis oceanica

Overview
NameNO08G01950
Unique NameNO08G01950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1853
Alignment locationchr8:590824..592676 -

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Properties
Property NameValue
DescriptionRiboflavin transporter 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:590824..592676 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
GO:0016021integral component of membrane
GO:0016020membrane
GO:0005887integral component of plasma membrane
Vocabulary: Molecular Function
TermDefinition
GO:0032217riboflavin transmembrane transporter activity
GO:0032217riboflavin transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0032218riboflavin transport
GO:0032218riboflavin transport
Vocabulary: INTERPRO
TermDefinition
IPR009357Endogenous_retrovirus_rcpt
Homology
BLAST of NO08G01950 vs. NCBI_GenBank
Match: EWM26594.1 (riboflavin transporter 2 [Nannochloropsis gaditana])

HSP 1 Score: 478.0 bits (1229), Expect = 3.800e-131
Identity = 287/528 (54.36%), Postives = 338/528 (64.02%), Query Frame = 0
Query:   13 PPKLPPAPPPWALHAAFTALGLSSFMLSNALWAEMAAFVAALPEADKLGSYLLLSLQVANVVPAAVMLRGPEAMHLESVIWILLLGGILTSQLMSFCWSSTTDMSNGNMEDSNSSHSIALIILTFFAGSINNSSSLYLYPFVAQWESRYISALATGEGLSGILVSLLALAQNVGGRHPRFSVTAFFQGVSAFYLFSVLGFSYLLREQKRQEARKMTSTATAPRAAATVAEETRHASDVSAYKRLLLLHQSTTHEENEESTLVLPLSSPSFSFSPSVPKEKPVLHLIYPLLLAQFGISAWAYGVIPALTPISTGGYQHSGKILQFSSFVSMALDPLSRALTHYCRCYRLVLLFGIVNLLAILLAVAAGMAPRPPFWEWEGGGVFVVVVNGGFTAAFAFCSTMFYFSIRLALQLRSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSDRVDFGVPAS--TEEGGXXXXXXXXXXXXXXXXXXXXXQEGFRWSSFVIQIGAFVGALLTFLLV 539
            P K PP  PPWAL AAFTALGLSSFMLSNALWAEM A V+ALPE +KLGSYLLLSLQ ANVVP   MLRGPE +HLES+IW LLLGG++ SQLMSFCW++TT +          SH+++LI+LTF AG INNSSSL+LYPFVA+WE RY+SALATGEGLSGILVSL+ L QNVGG  PRFSV A+FQGVSA Y+FS+LGF +LL+E++ ++AR       A      VAEE   A    A KR+LL     + ++ +   LV+PLS+P+ +         PVL LI+P LLAQFGIS WAYGVIPALTPIST GYQH+  +LQ+SS VSMALDPLSRALTH  RCYRL LL  +VN+LA +L VAA ++PRPPF +   GG+FVV  NG FTAAFAF STM +F I  AL  R                                                VG  R   G P S    EG                      Q+GFRWS F++Q+GAFVGAL TFLLV
Sbjct:    6 PLKAPPPAPPWALQAAFTALGLSSFMLSNALWAEMPALVSALPEGNKLGSYLLLSLQAANVVPVIAMLRGPEVVHLESIIWALLLGGVVASQLMSFCWAATTPIPGA----GGKSHALSLILLTFLAGCINNSSSLFLYPFVARWERRYVSALATGEGLSGILVSLIGLTQNVGGARPRFSVRAYFQGVSALYVFSLLGFLFLLQEERHKKAR------VALSMDRVVAEERETAWQGGAKKRVLL-----SVKDEDSDALVVPLSAPTLA-------PAPVLALIWPFLLAQFGISLWAYGVIPALTPISTSGYQHAAHVLQYSSIVSMALDPLSRALTHRLRCYRLPLLVVLVNVLATVLCVAAAISPRPPFVDQPLGGLFVVFFNGAFTAAFAFTSTMVFFCIHRALGPR-------------------HGLPLPVHARRAGGADEAPGLQEDACALMVGQRR-GGGRPVSIGRGEGEGEHAGEVGPGGEEEFVQVLRRQDGFRWSGFIVQVGAFVGALATFLLV 491          
BLAST of NO08G01950 vs. NCBI_GenBank
Match: XP_008607893.1 (hypothetical protein SDRG_04022 [Saprolegnia diclina VS20] >EQC38301.1 hypothetical protein SDRG_04022 [Saprolegnia diclina VS20])

HSP 1 Score: 167.9 bits (424), Expect = 8.400e-38
Identity = 123/398 (30.90%), Postives = 199/398 (50.00%), Query Frame = 0
Query:   24 ALHAAFTALGLSSFMLSNALWAEMAAFVAALPEADKLGSYLLLSLQVANVVPAAVML--RGPEAMHLESVIWILLLGGILTSQLMSFCWSSTTDMSNGNMEDSNSSHSIALIILTFFAGSINNSSSLYLYPFVAQWESRYISALATGEGLSGILVSLLALAQNVGGRHPRFSVTAFFQGVSAFYLFSVLGFSYLLREQKRQEARKMTSTATAPRAAATVAEETRHASDVSAYKRLLLLHQSTTHEENEESTLVLPLSSPSFSFSPSVPKEKPVLHLIYPLLLAQFGISAWAYGVIPALTPISTGGYQHSGKILQFSSFVSMALDPLSRALTHYCRCYRLVLLFGIVNLLAILLAVAAGMAPRPPFWEWEGGGVFVVVVNGGFTAAFAFCSTMFYFSIR 420
            A++AAF   GL S+++SN ++ E+AA     PE   + +YL++++Q +N+ PA  M+     +   + + IW LL  GI+   L+S  W  T+             HS AL++L           S+  YPFVA +   + SAL+TGEGLSG++  +L + Q+ G  H   +V  +F   +  +L ++L F +L++               +P A    A   R       YK    L ++ +       TL L L      FS +V +   V+  ++  LL Q  + A ++GVIP++ P     Y +S ++L++SS +SMA DPL+R LT + R Y + +L  +  LL  L+AV+A  A  P F  +  GG+  VV N  F   FA+  TM Y +++
Sbjct:   43 AVYAAFILFGLGSWIMSNCVFVEIAALYQRTPEKAAISAYLIVAIQASNIFPALYMVFNNDQQLFSIRTAIWGLLSMGIVVCVLLSIFWDQTSVF-------FGHEHSTALLVLVXXXXXXXXXXSVVYYPFVATFPPLFTSALSTGEGLSGVIAGVLGIIQDPGATHMHITVGGYFFYGAVVFLVALLAFVFLVK---------------SPWATQIQASMYREDGGDFDYKFTPPLKRAPSPAMKMNETLPLVLPQSKHQFSTAVERRNYVVSKLWKPLLCQVVLCAMSFGVIPSILPFLGSKYSNSAEVLKWSSVLSMACDPLARFLTSFYRWYNVTVLTSLTVLLGALMAVSATTA-HPIFSSYALGGIAPVVGNCVFVFLFAYSQTMAYLTLK 417          
BLAST of NO08G01950 vs. NCBI_GenBank
Match: OQS02094.1 (hypothetical protein THRCLA_05502 [Thraustotheca clavata])

HSP 1 Score: 167.9 bits (424), Expect = 8.400e-38
Identity = 119/398 (29.90%), Postives = 207/398 (52.01%), Query Frame = 0
Query:   24 ALHAAFTALGLSSFMLSNALWAEMAAFVAALPEADKLGSYLLLSLQVANVVPAAVMLRGPEAMH--LESVIWILLLGGILTSQLMSFCWSSTTDMSNGNMEDSNSSHSIALIILTFFAGSINNSSSLYLYPFVAQWESRYISALATGEGLSGILVSLLALAQNVGGRHPRFSVTAFFQGVSAFYLFSVLGFSYLLREQKRQEARKMTSTATAPRAAATVAEETRHASDVSAYKRLLLLHQSTTHEENEESTLVLPLSSPSFSFSPSVPKEKPVLHLIYPLLLAQFGISAWAYGVIPALTPISTGGYQHSGKILQFSSFVSMALDPLSRALTHYCRCYRLVLLFGIVNLLAILLAVAAGMAPRPPFWEWEGGGVFVVVVNGGFTAAFAFCSTMFYFSIR 420
            A++ AF   GL S++++N ++ E+AA     PE   + +YL++++Q +NV P   ML   E  +  + + IW LL  GIL   L+S  W  T+            SHS AL++L FF G +++++S+  YPFVA +   + SAL+TGEGLSG++  ++ L Q+ G ++   ++  +F   +  +L +++ F++L++            ++ A +   ++  E     +      +  +  S+T   NE   LVLP       F+    +   VL  ++  L  Q  + A +YGVIP++ P     Y + G++L++SS +SMA DPL+R +T + R Y + LL  I   L +L+  +A +   P F  +  GG+  V  N  F   FA+  TM Y +++
Sbjct:   25 AVYVAFIIFGLGSWIMTNCVFVEIAALYQQTPEKAAISAYLIVAIQASNVFPMIYMLLNNEQQYFSIRAAIWGLLTLGILVCVLLSIFWDQTSVF-------FGHSHSTALLVLVFFGGMVSSTTSVVYYPFVATFPPLFTSALSTGEGLSGVIAGVIGLIQDPGSKNMNITIGGYFFCGALVFLVALIAFAFLVK------------SSWAQKIHTSMYHEDSGDFEYKFTPPIKRVLSSSTPRMNETLPLVLP--HKKHYFANDTDRRNYVLTKLWKPLTCQVILCAMSYGVIPSILPFLGSKYVNGGEVLKWSSVLSMASDPLARFITSFYRWYNVTLLTLITISLGLLMTFSATL-QHPLFASYTYGGIIPVAGNCIFVFLFAYSQTMAYLTLK 400          
BLAST of NO08G01950 vs. NCBI_GenBank
Match: XP_008880401.1 (hypothetical protein, variant 4 [Aphanomyces invadans] >ETV91011.1 hypothetical protein, variant 4 [Aphanomyces invadans])

HSP 1 Score: 161.0 bits (406), Expect = 1.000e-35
Identity = 125/432 (28.94%), Postives = 213/432 (49.31%), Query Frame = 0
Query:    6 RHSSSSFPPKLPPAPPPW---ALHAAFTALGLSSFMLSNALWAEMAAFVAALPEADKLGSYLLLSLQVANVVPAAVML--RGPEAMHLESVIWILLLGGILTSQLMSFCWSSTTDMSNGNMEDSNSSHSIALIILTFFAGSINNSSSLYLYPFVAQWESRYISALATGEGLSGILVSLLALAQNVGGRHPRFSVTAFFQGVSAFYLFSVLGFSYLLREQKRQEARKMTSTATAPRAAATVAEETRHASDVSAYKRLLLLHQSTTHEENEES-----------TLVLPLSSP--SFSFSPSVPKEKPVLHLIYPLLLAQFGISAWAYGVIPALTPISTGGYQHSGKILQFSSFVSMALDPLSRALTHYCRCYRLVLLFGIVNLLAILLAVAAGMAPRPPFWEWEGGGVFVVVVNGGFTAAFAFCSTMFYFSIR 420
            RH   + P K PPA   W   A++AAF   GL S++++N+++ E AA    +PE   + +YL+++LQ AN+ P   M+     +   + + IW+LL  G+LT  L+S  W  T+             HS AL+ L FF G+++ ++++  YPFV+ +   + SAL+TGEGLSG++  ++ + Q+ G    R SV+ FF+     +  +++ + +L                 A  A A   + + +A D  A++        TT  ++  S               PL SP     F     +   VL  ++  LL QF + A ++GVIP++ P     Y  S ++L++SS +SMA DP +R LT + R Y +  L  +   + +++ +++  A  P F  +  GG+  V  N  F   FA+  TM Y +++
Sbjct:   63 RHVLLASPSKTPPA--RWKVAAVYAAFIVFGLGSWIMTNSVFIETAALFQRVPEKAAISAYLIVALQGANIFPTLYMVFNSDQQLFTIRTAIWVLLALGVLTCVLLSLFWDITSVF-------WGHEHSTALLALVFFGGAVSATTTVVYYPFVSTFPPVFTSALSTGEGLSGVVAGVIGIWQDPGATPMRLSVSTFFRWAGGVFAVAMVAYWFL-----------------ATSAIARDVQHSNYAEDPGAFE--CKFTPPTTRSKSARSXXXXXXXXXXXXXXXPLVSPVAPHRFESPTHRRDYVLCKLWKPLLFQFVLCAMSFGVIPSIMPFLGSKYLSSAQVLKWSSVLSMACDPCARFLTSFYRWYNVTALSAMTLFVGLVMVLSSTTAD-PIFSTYAYGGLAPVAANCSFVFLFAYAQTMVYLTLK 465          
BLAST of NO08G01950 vs. NCBI_GenBank
Match: XP_008880396.1 (hypothetical protein H310_14339 [Aphanomyces invadans] >ETV91007.1 hypothetical protein H310_14339 [Aphanomyces invadans])

HSP 1 Score: 152.5 bits (384), Expect = 3.700e-33
Identity = 128/442 (28.96%), Postives = 212/442 (47.96%), Query Frame = 0
Query:    6 RHSSSSFPPKLPPAPPPW---ALHAAFTALGLSSFMLSNALWAEMAAFVAALPEADKLGSYLLLSLQVANVVPAAVML--RGPEAMHLESVIWILLLGGILTSQLMSFCWSSTTDMSNGNMEDSNSSHSIALIILTFFAGSINNSSSLYLYPFVAQWESRYISALATGEGLSGILVSLLALAQNVGGRHPRFSVTAFFQGVSAFYLFSVLGFSYLLREQKRQEARKMTSTATAPR-------AAATVAEETRH---ASDVSAYKRLLLLHQSTTHEENEES-----------TLVLPLSSP--SFSFSPSVPKEKPVLHLIYPLLLAQFGISAWAYGVIPALTPISTGGYQHSGKILQFSSFVSMALDPLSRALTHYCRCYRLVLLFGIVNLLAILLAVAAGMAPRPPFWEWEGGGVFVVVVNGGFTAAFAFCSTMFYFSIR 420
            RH   + P K PPA   W   A++AAF   GL S++++N+++ E AA    +PE   + +YL+++LQ AN+ P   M+     +   + + IW+LL  G+LT  L+S  W  T+             HS AL+ L FF G+++ ++++  YPFV+ +   + SAL+TGEGLSG++  ++ + Q+ G    R SV+ FF+           G        KR     +     A         A + +A + +H   A D  A++        TT  ++  S               PL SP     F     +   VL  ++  LL QF + A ++GVIP++ P     Y  S ++L++SS +SMA DP +R LT + R Y +  L  +   + +++ +++  A  P F  +  GG+  V  N  F   FA+  TM Y +++
Sbjct:   63 RHVLLASPSKTPPA--RWKVAAVYAAFIVFGLGSWIMTNSVFIETAALFQRVPEKAAISAYLIVALQGANIFPTLYMVFNSDQQLFTIRTAIWVLLALGVLTCVLLSLFWDITSVF-------WGHEHSTALLALVFFGGAVSATTTVVYYPFVSTFPPVFTSALSTGEGLSGVVAGVIGIWQDPGATPMRLSVSTFFRWA---------GIDRSTTHAKRTSLACVVGGVFAVAMVAYWFLATSAIARDVQHSNYAEDPGAFE--CKFTPPTTRSKSARSXXXXXXXXXXXXXXXPLVSPVAPHRFESPTHRRDYVLCKLWKPLLFQFVLCAMSFGVIPSIMPFLGSKYLSSAQVLKWSSVLSMACDPCARFLTSFYRWYNVTALSAMTLFVGLVMVLSSTTAD-PIFSTYAYGGLAPVAANCSFVFLFAYAQTMVYLTLK 483          
BLAST of NO08G01950 vs. NCBI_GenBank
Match: OQR95743.1 (hypothetical protein THRCLA_07609 [Thraustotheca clavata])

HSP 1 Score: 152.5 bits (384), Expect = 3.700e-33
Identity = 117/393 (29.77%), Postives = 196/393 (49.87%), Query Frame = 0
Query:   26 HAAFTALGLSSFMLSNALWAEMAAFVAALPEADKLGSYLLLSLQVANVVPAAVMLRGPEAMHLE--SVIWILLLGGILTSQLMSFCWSSTTDMSNGNMEDSNSSHSIALIILTFFAGSINNSSSLYLYPFVAQWESRYISALATGEGLSGILVSLLALAQNVGGRHPRFSVTAFFQGVSAFYLFSVLGFSYLLREQKRQEARKMTSTATAPRAAATVAEETRHASDVSAYKRLLLLHQSTTHEENEESTLVLPLSSPSFSFSPSVPKEKPVLHLIYPLLLAQFGISAWAYGVIPALTPISTGGYQHSGKILQFSSFVSMALDPLSRALTHYCRCYRLVLLFGIVNLLAILLAVAAGMAPRPPFW-EWEGGGVFVVVVNGGFTAAFAFCSTMFY 416
            + AF   GL S+++S+ ++A+ AA +   PE   +G+Y+++SLQ AN+ P   ML      ++   ++IW LL+ G++   L++  W+STT +  G++      HS AL  L F  G+++ +S++  YPF A +   + SALATGE    ++  +LA+ Q+VG     FSV   F   +  +LFS L F+YL R+ K  E                VA++             LL+ Q+ T                         + K VL +I+  LL Q+ ++ +++ VIP++ PI  G Y+++  +++++S + M  DP +R L+ + R  R+ L        A+ L V A    + P W + + GGV VVV N  +T+  AF  T  Y
Sbjct:   13 YIAFVGFGLGSWVVSDFVFAQFAALMQQTPEGYSIGAYVIVSLQSANIFPMLYMLLNSRQHYISIPTMIWGLLVLGMIACSLLAVFWNSTTTI-GGHL------HSTALFALIFCGGAVSATSTVVFYPFAAAYPVMFTSALATGESFGAVIAGVLAIIQDVGSSKMNFSVGVAFLCGAVLFLFSFLSFAYLRRQHKSIE---------------LVADQE------------LLMEQAPT-------------------------EHKDVLRVIWRPLLCQWLLAVFSFAVIPSILPILGGKYKNAPVVMKWTSILGMLCDPAARFLSGFYRTQRVELFTVAALFFALWLTVWASY--KEPIWCKEKSGGVVVVVANCLYTSLSAFTQTSLY 344          
BLAST of NO08G01950 vs. NCBI_GenBank
Match: XP_008880398.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETV91008.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 152.1 bits (383), Expect = 4.800e-33
Identity = 125/447 (27.96%), Postives = 213/447 (47.65%), Query Frame = 0
Query:    6 RHSSSSFPPKLPPAPPPW---ALHAAFTALGLSSFMLSNALWAEMAAFVAALPEADKLGSYLLLSLQVANVVPAAVML--RGPEAMHLESVIWILLLGGILTSQLMSFCWSSTTDMSNGNMEDSNSSHSIALIILTFFAGSINNSSSLYLYPFVAQWESRYISALATGEGLSGILVSLLALAQNVGGRHPRFSVTAFFQGVSAFYLFSVLGFSYLLREQKRQEARKMTSTATAPRAAATVAEETRHASDVSAYKRLLLLHQSTTHEENEES-----------TLVLPLSSP--SFSFSPSVPKEKPVLHLIYPLLLAQFGISAWAYGVIPALTPISTGGYQHSGKILQFSSFVSMALDPLSRALTHYCRCYRLVLLFGIVNLLAILLAVAAGMAPRPPFWEWEGGGV---------------FVVVVNGGFTAAFAFCSTMFYFSIR 420
            RH   + P K PPA   W   A++AAF   GL S++++N+++ E AA    +PE   + +YL+++LQ AN+ P   M+     +   + + IW+LL  G+LT  L+S  W  T+             HS AL+ L FF G+++ ++++  YPFV+ +   + SAL+TGEGLSG++  ++ + Q+ G    R SV+ FF+     +  +++ + +L                 A  A A   + + +A D  A++        TT  ++  S               PL SP     F     +   VL  ++  LL QF + A ++GVIP++ P     Y  S ++L++SS +SMA DP +R LT + R Y +  L  +   + +++ +++  A  P F  +  GG+                 V  N  F   FA+  TM Y +++
Sbjct:   63 RHVLLASPSKTPPA--RWKVAAVYAAFIVFGLGSWIMTNSVFIETAALFQRVPEKAAISAYLIVALQGANIFPTLYMVFNSDQQLFTIRTAIWVLLALGVLTCVLLSLFWDITSVF-------WGHEHSTALLALVFFGGAVSATTTVVYYPFVSTFPPVFTSALSTGEGLSGVVAGVIGIWQDPGATPMRLSVSTFFRWAGGVFAVAMVAYWFL-----------------ATSAIARDVQHSNYAEDPGAFE--CKFTPPTTRSKSARSXXXXXXXXXXXXXXXPLVSPVAPHRFESPTHRRDYVLCKLWKPLLFQFVLCAMSFGVIPSIMPFLGSKYLSSAQVLKWSSVLSMACDPCARFLTSFYRWYNVTALSAMTLFVGLVMVLSSTTAD-PIFSTYAYGGLARTSARPTIDLTHSRVAVAANCSFVFLFAYAQTMVYLTLK 480          
BLAST of NO08G01950 vs. NCBI_GenBank
Match: OQR97780.1 (hypothetical protein ACHHYP_10014 [Achlya hypogyna])

HSP 1 Score: 150.6 bits (379), Expect = 1.400e-32
Identity = 124/421 (29.45%), Postives = 198/421 (47.03%), Query Frame = 0
Query:   11 SFPPKLPPAPPPWAL----------HAAFTALGLSSFMLSNALWAEMAAFVAALPEADKLGSYLLLSLQVANVVPAAVMLRGPE--AMHLESVIWILLLGGILTSQLMSFCWSSTTDMSNGNMEDSNSSHSIALIILTFFAGSINNSSSLYLYPFVAQWESRYISALATGEGLSGILVSLLALAQNVGGRHPRFSVTAFFQGVSAFYLFSVLGFSYLLREQKRQEARKMTSTATAPRAAATVAEETRHASDVSAYKRLLLLHQSTTHEENEESTLVLPLSSPSFSFSPSVPKEKPVLHLIYPLLLAQFGISAWAYGVIPALTPISTGGYQHSGKILQFSSFVSMALDPLSRALTHYCRCYRLVLLFGIVNLLAILLAVAAGMAPRPPFWEWEGGGVFVVVVNGGFTAAFAFCSTMFYFSIR 420
            + PP   P+P   AL          +AAF   GL S+++SN ++ E+AA     PE   + +YL++++Q +N+ P   M+   E   + + + IW LL  GI+   L+S  W  T+ +          SHS AL+              +  YPFVA +   + SAL+TGEGLSG++  +L + Q+ G  H   ++  FF   +  +  ++L F +L            T ++ A    +++  E     D      L     S   + +E   LVLP S     FS SV +   VL  ++  L  Q  + A ++GVIP++ P     Y  S ++L++SS +SMA DPL+R LT + R Y +  L  +  LL   + V++  A  P F     GG+  V  N  F   FA+  TM Y +++
Sbjct:   20 AMPPAALPSPSASALYREPHKVAAVYAAFILFGLGSWIMSNCVFVEIAALYQRTPEKAAISAYLIVAIQASNIFPTLYMMFNNEQQLVSIRTAIWALLAMGIVVCVLLSIFWDQTSVI-------FGHSHSTALLXXXXXXXXXXXXXXVVYYPFVATFPPLFTSALSTGEGLSGVIAGVLGIVQDPGASHMNITIGGFFFYGAIVFFVALLAFVFL------------TKSSWATEIHSSMYREDSGDFDYKFTPPLKRAPPSPARKMSETLPLVLPQS--KHQFSSSVERRNYVLTKLWKPLSCQVILCAMSFGVIPSILPFLGSKYADSAEVLKWSSVLSMACDPLARFLTSFYRWYNVTALTSLTVLLGAGMVVSSTSA-HPLFSAHPLGGIAPVAANCTFVFLFAYSQTMAYLTLK 418          
BLAST of NO08G01950 vs. NCBI_GenBank
Match: XP_008880402.1 (hypothetical protein, variant 5 [Aphanomyces invadans] >ETV91012.1 hypothetical protein, variant 5 [Aphanomyces invadans])

HSP 1 Score: 145.6 bits (366), Expect = 4.500e-31
Identity = 113/394 (28.68%), Postives = 195/394 (49.49%), Query Frame = 0
Query:    6 RHSSSSFPPKLPPAPPPW---ALHAAFTALGLSSFMLSNALWAEMAAFVAALPEADKLGSYLLLSLQVANVVPAAVML--RGPEAMHLESVIWILLLGGILTSQLMSFCWSSTTDMSNGNMEDSNSSHSIALIILTFFAGSINNSSSLYLYPFVAQWESRYISALATGEGLSGILVSLLALAQNVGGRHPRFSVTAFFQGVSAFYLFSVLGFSYLLREQKRQEARKMTSTATAPRAAATVAEETRHASDVSAYKRLLLLHQSTTHEENEES-----------TLVLPLSSP--SFSFSPSVPKEKPVLHLIYPLLLAQFGISAWAYGVIPALTPISTGGYQHSGKILQFSSFVSMALDPLSRALTHYCRCYRLVLLFGIVNLLAILLAVAAGMA 382
            RH   + P K PPA   W   A++AAF   GL S++++N+++ E AA    +PE   + +YL+++LQ AN+ P   M+     +   + + IW+LL  G+LT  L+S  W  T+             HS AL+ L FF G+++ ++++  YPFV+ +   + SAL+TGEGLSG++  ++ + Q+ G    R SV+ FF+     +  +++ + +L                 A  A A   + + +A D  A++        TT  ++  S               PL SP     F     +   VL  ++  LL QF + A ++GVIP++ P     Y  S ++L++SS +SMA DP +R LT + R Y +  L  +   + +++ +++  A
Sbjct:   63 RHVLLASPSKTPPA--RWKVAAVYAAFIVFGLGSWIMTNSVFIETAALFQRVPEKAAISAYLIVALQGANIFPTLYMVFNSDQQLFTIRTAIWVLLALGVLTCVLLSLFWDITSVF-------WGHEHSTALLALVFFGGAVSATTTVVYYPFVSTFPPVFTSALSTGEGLSGVVAGVIGIWQDPGATPMRLSVSTFFRWAGGVFAVAMVAYWFL-----------------ATSAIARDVQHSNYAEDPGAFE--CKFTPPTTRSKSARSXXXXXXXXXXXXXXXPLVSPVAPHRFESPTHRRDYVLCKLWKPLLFQFVLCAMSFGVIPSIMPFLGSKYLSSAQVLKWSSVLSMACDPCARFLTSFYRWYNVTALSAMTLFVGLVMVLSSTTA 428          
BLAST of NO08G01950 vs. NCBI_GenBank
Match: XP_008880399.1 (hypothetical protein, variant 2 [Aphanomyces invadans] >ETV91009.1 hypothetical protein, variant 2 [Aphanomyces invadans])

HSP 1 Score: 144.8 bits (364), Expect = 7.700e-31
Identity = 117/394 (29.70%), Postives = 192/394 (48.73%), Query Frame = 0
Query:    6 RHSSSSFPPKLPPAPPPW---ALHAAFTALGLSSFMLSNALWAEMAAFVAALPEADKLGSYLLLSLQVANVVPAAVML--RGPEAMHLESVIWILLLGGILTSQLMSFCWSSTTDMSNGNMEDSNSSHSIALIILTFFAGSINNSSSLYLYPFVAQWESRYISALATGEGLSGILVSLLALAQNVGGRHPRFSVTAFFQGVSAFYLFSVLGFSYLLREQKRQEARKMTSTATAPRAAATVAEETRHASDVSAYKRLLLLHQSTTHEENEES-----------TLVLPLSSP--SFSFSPSVPKEKPVLHLIYPLLLAQFGISAWAYGVIPALTPISTGGYQHSGKILQFSSFVSMALDPLSRALTHYCRCYRLVLLFGIVNLLAILLAVAAGMA 382
            RH   + P K PPA   W   A++AAF   GL S++++N+++ E AA    +PE   + +YL+++LQ AN+ P   M+     +   + + IW+LL  G+LT  L+S  W  T+             HS AL+ L FF G+++ ++++  YPFV+ +   + SAL+TGEGLSG++  ++ + Q+ G    R SV+ FF+     +  +++ + +L                 A  A A   + + +A D  A++        TT  ++  S               PL SP     F     +   VL  ++  LL QF + A ++GVIP++ P     Y  S ++L++SS +SMA DP +R LT + R Y       +  L A+ L V  G A
Sbjct:   63 RHVLLASPSKTPPA--RWKVAAVYAAFIVFGLGSWIMTNSVFIETAALFQRVPEKAAISAYLIVALQGANIFPTLYMVFNSDQQLFTIRTAIWVLLALGVLTCVLLSLFWDITSVF-------WGHEHSTALLALVFFGGAVSATTTVVYYPFVSTFPPVFTSALSTGEGLSGVVAGVIGIWQDPGATPMRLSVSTFFRWAGGVFAVAMVAYWFL-----------------ATSAIARDVQHSNYAEDPGAFE--CKFTPPTTRSKSARSXXXXXXXXXXXXXXXPLVSPVAPHRFESPTHRRDYVLCKLWKPLLFQFVLCAMSFGVIPSIMPFLGSKYLSSAQVLKWSSVLSMACDPCARFLTSFYRWY------NVTALSAMTLFVGVGAA 422          
The following BLAST results are available for this feature:
BLAST of NO08G01950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26594.13.800e-13154.36riboflavin transporter 2 [Nannochloropsis gaditana... [more]
XP_008607893.18.400e-3830.90hypothetical protein SDRG_04022 [Saprolegnia dicli... [more]
OQS02094.18.400e-3829.90hypothetical protein THRCLA_05502 [Thraustotheca c... [more]
XP_008880401.11.000e-3528.94hypothetical protein, variant 4 [Aphanomyces invad... [more]
XP_008880396.13.700e-3328.96hypothetical protein H310_14339 [Aphanomyces invad... [more]
OQR95743.13.700e-3329.77hypothetical protein THRCLA_07609 [Thraustotheca c... [more]
XP_008880398.14.800e-3327.96hypothetical protein, variant 1 [Aphanomyces invad... [more]
OQR97780.11.400e-3229.45hypothetical protein ACHHYP_10014 [Achlya hypogyna... [more]
XP_008880402.14.500e-3128.68hypothetical protein, variant 5 [Aphanomyces invad... [more]
XP_008880399.17.700e-3129.70hypothetical protein, variant 2 [Aphanomyces invad... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008837NSK008837Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01950.1NO08G01950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582469gene_3525Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g102gene3862Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01950.1NO08G01950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01950 ID=NO08G01950|Name=NO08G01950|organism=Nannochloropsis oceanica|type=gene|length=1853bp
ATGGCAAGCGTCATTCGCCACTCCTCTTCGTCCTTTCCCCCAAAGCTCCC
GCCTGCCCCTCCACCATGGGCACTTCATGCTGCCTTCACGGCCCTGGGTC
TGTCGTCCTTTATGCTGTCAAATGCACTATGGGCGGAGATGGCAGCCTTT
GTTGCTGCGTTGCCGGAAGCCGATAAGCTAGGAAGCTATTTGCTATTGTC
GCTCCAGgtaggaaagggctcaagaggaagggggctagcatgcatgcggt
gggacccgaagcaagccctactcccagctcatgtcatccccattctcaac
gacacgacaccctcgcctcacccgcagGTTGCCAATGTCGTCCCAGCTGC
AGTCATGCTCCGCGGCCCCGAAGCAATGCACCTCGAATCCGTCATTTGGA
TCCTCCTCCTCGGCGGCATCCTCACAAGTCAGCTCATGAGCTTCTGTTGG
TCCTCTACCACAGACATGAGCAACGGCAACATGGAAGACAGCAACAGTTC
CCATTCAATCGCCTTGATCATTTTGACTTTCTTTGCAGGCTCGATTAATA
ACTCCTCCTCACTCTACCTCTACCCCTTCGTCGCGCAATGGGAAAGTCGC
TACATCTCCGCCCTAGCCACAGGAGAGGGCTTATCAGGCATATTGGTATC
TTTATTGGCGCTCGCTCAAAATGTAGGGGGGAGGCATCCGAGGTTTTCGG
TAACTGCATTTTTCCAGGGCGTCAGTGCCTTTTACCTCTTTTCGGTGCTT
GGCTTCTCGTACCTCTTAAGGGAGCAGAAACGACAGGAAGCACGCAAGAT
GACCTCAACAGCAACAGCGCCGAGAGCAGCAGCAACAGTAGCAGAGGAAA
CAAGACACGCATCCGACGTATCAGCTTATAAACGCCTCCTCCTCCTCCAC
CAAAGCACCACCCACGAGGAAAACGAAGAGAGCACCCTCGTCCTCCCTCT
CTCCTCCCCATCTTTCTCCTTCTCCCCCTCCGTTCCCAAAGAGAAACCCG
TCCTCCACCTTATTTACCCTCTATTACTTGCTCAATTCGGAATCAGTGCC
TGGGCCTATGGCGTCATTCCTGCCCTCACCCCAATCTCGACAGGGGGGTA
TCAACATAGTGGGAAGATATTACAATTTTCATCCTTTGTCTCCATGGCAC
TCGATCCACTCTCGCGGGCTTTGACTCACTATTGTCGATGTTATCGTCTT
GTTTTGCTGTTTGGAATTGTGAATTTGCTGGCGATACTCTTGGCGGTGGC
GGCAGGGATGGCCCCCCGACCTCCCTTTTGGGAGTGGGAGGGAGGAGGGG
TGTTTGTGGTTGTTGTGAATGGAGGGTTCACGGCGGCATTTGCGTTCTGT
TCAACGATGTTTTACTTTAGCATTCGTTTGGCGCTGCAATTGCGGAGTGA
GCAAGAGGAGGAGAACGGAAAGGAAGGGAGAGAGAGTGGGGCGGGAGGGG
GAGTGATGGGGGTGCAGGCGGCGGCTGCGTTTGAGACGTGTGCTATGAAG
GAGGGAGAGGAGACGGAGGAAGGGGAGCAAGGAAACGAAGTTGGTAGTGA
CAGAGTAGATTTTGGTGTGCCCGCATCGACGGAGGAGGGGGGAAGGGATG
AAGGAAGAGAAGACGAGGAGAAGCAGCAGTTGGAGCGAGGGCAGCTGTTG
AGATGGCAGGAGGGATTCAGGTGGTCGAGTTTTGTGATCCAGATAGGGGC
ATTCGTGGGTGCCTTGCTGACATTTCTGCTTGTCAGGTAGAGTTCTTAAG
CCCTCCTCCTTACGGTTTTGAGTGAAAGCGGGTTAAGCAGAAGGGGTGGA
AAAATTACAAAATAAAACGCTCTGTACACTAATTATAGAAACCTCATTTT
TGG
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protein sequence of NO08G01950.1

>NO08G01950.1-protein ID=NO08G01950.1-protein|Name=NO08G01950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=540bp
MASVIRHSSSSFPPKLPPAPPPWALHAAFTALGLSSFMLSNALWAEMAAF
VAALPEADKLGSYLLLSLQVANVVPAAVMLRGPEAMHLESVIWILLLGGI
LTSQLMSFCWSSTTDMSNGNMEDSNSSHSIALIILTFFAGSINNSSSLYL
YPFVAQWESRYISALATGEGLSGILVSLLALAQNVGGRHPRFSVTAFFQG
VSAFYLFSVLGFSYLLREQKRQEARKMTSTATAPRAAATVAEETRHASDV
SAYKRLLLLHQSTTHEENEESTLVLPLSSPSFSFSPSVPKEKPVLHLIYP
LLLAQFGISAWAYGVIPALTPISTGGYQHSGKILQFSSFVSMALDPLSRA
LTHYCRCYRLVLLFGIVNLLAILLAVAAGMAPRPPFWEWEGGGVFVVVVN
GGFTAAFAFCSTMFYFSIRLALQLRSEQEEENGKEGRESGAGGGVMGVQA
AAAFETCAMKEGEETEEGEQGNEVGSDRVDFGVPASTEEGGRDEGREDEE
KQQLERGQLLRWQEGFRWSSFVIQIGAFVGALLTFLLVR*
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Synonyms
Publications