NO08G01790, NO08G01790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G01790 vs. NCBI_GenBank
Match: EWM26731.1 (hypothetical protein Naga_100001g85 [Nannochloropsis gaditana]) HSP 1 Score: 657.1 bits (1694), Expect = 6.800e-185 Identity = 375/585 (64.10%), Postives = 420/585 (71.79%), Query Frame = 0 Query: 3 IFVWPIIHAFLAALITTWDVLPPTSKAYDMVPNHIVARLGKNATLDRVVTEWVRDTWRWGEPALNPSVALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVSFMYIRSPTEDPVVTGLAKHLSMVLREVGPKGRVVHLAHSGGALLTYLVAKYHLMESDRRRIDVINFGGARSITRKYFGKATNYYARNDPILLVNRRAMHLMQQLLNESADGEVIYLKHNTSFVFLQGRSGDRFADHSLVGPTYLTALNKEAAAFRRSYYRAYWLEGLTVAKPPEMGWGRFVRKRVAAATGFHNYFSNSTVVRLYYDGGRGREGGAASTWTNATNAALRLPKRFRK------------------------EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPFPSF-LFPPSSSFSSS-SSRLVSWMAANWKHNNSQSLA---------------LVVPPPRSHLFSLSSWFGNSRSSGSSIP-AIRGSGSDSSMQVWMGRLTNKSMTTAGKWAEETKQRVRVVRKTAARWTGRRHFFAGREERERLLAREXXXXXXXXXXXXXAAK-GHPFLFF 545 +F+WP IHAFLAALITTWDVLPPTSKAYD+VPNHIVA+LGKN T DRVV EWVRDTWRWGEP+LNPS+ALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVS+MYIRSPTEDPVVTGLA+HLS VL EVGPKGRV+HLAHSGGALLTYLVAKYHL E+DRRRIDV+NFGGARSIT+KYFGKATNYYARNDPILLVNRRAM+LMQQLLNESADGEVIYLKHNTSFVFLQGR+GD DHS +GPTYL ALNKEAA FRRSYYR YWL+GL +AKPP+MGW RFVRKRVAAATGFHNYFSNST+VRLYY G +STW + + AAL PKR RK XXXXXXXXXXXXXXXXXXXXX S P + + ++S+SSS + L SW+ +W+ NN+Q+L G+ +GS + ++ G S++ V RL + + + +R VRK AARWTGRRHFFAGRE RER +A E A K GHPFLFF Sbjct: 2 VFIWPFIHAFLAALITTWDVLPPTSKAYDLVPNHIVAKLGKNTTFDRVVKEWVRDTWRWGEPSLNPSIALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVSYMYIRSPTEDPVVTGLARHLSRVLLEVGPKGRVIHLAHSGGALLTYLVAKYHLKETDRRRIDVLNFGGARSITQKYFGKATNYYARNDPILLVNRRAMNLMQQLLNESADGEVIYLKHNTSFVFLQGRAGDALTDHSFIGPTYLMALNKEAAVFRRSYYRPYWLDGLIIAKPPDMGWARFVRKRVAAATGFHNYFSNSTLVRLYY----GDPLMDSSTWDSTSRAALHFPKRVRKYLRKKYFSLRGLPYVSAKTDKVNIPVPAKQVQXXXXXXXXXXXXXXXXXXXXXRHQERSDRPGWGIDGAATSWSSSLPATLSSWIGRSWRQNNTQALVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSPSKAGSLVKFSVESPGWSSALHV--SRLAVQDLRI------HAQHHIRRVRKRAARWTGRRHFFAGREGRERAMAAEAARTAAALAEAEKAVKGGHPFLFF 574
BLAST of NO08G01790 vs. NCBI_GenBank
Match: XP_005854449.1 (hypothetical protein NGA_0218700 [Nannochloropsis gaditana CCMP526] >EKU21915.1 hypothetical protein NGA_0218700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 622.1 bits (1603), Expect = 2.400e-174 Identity = 289/328 (88.11%), Postives = 309/328 (94.21%), Query Frame = 0 Query: 3 IFVWPIIHAFLAALITTWDVLPPTSKAYDMVPNHIVARLGKNATLDRVVTEWVRDTWRWGEPALNPSVALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVSFMYIRSPTEDPVVTGLAKHLSMVLREVGPKGRVVHLAHSGGALLTYLVAKYHLMESDRRRIDVINFGGARSITRKYFGKATNYYARNDPILLVNRRAMHLMQQLLNESADGEVIYLKHNTSFVFLQGRSGDRFADHSLVGPTYLTALNKEAAAFRRSYYRAYWLEGLTVAKPPEMGWGRFVRKRVAAATGFHNYFSNSTVVRLYYDGGRGR 331 +F+WP IHAFLAALITTWDVLPPTSKAYD+VPNHIVA+LGKN T DRVV EWVRDTWRWGEP+LNPS+ALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVS+MYIRSPTEDPVVTGLA+HLS VL EVGPKGRV+HLAHSGGALLTYLVAKYHL E+DRRRIDV+NFGGARSIT+KYFGKATNYYARNDPILLVNRRAM+LMQQLLNESADGEVIYLKHNTSFVFLQGR+GD DHS +GPTYL ALNKEAA FRRSYYR YWL+GL +AKPP+MGW RFVRKRVAAATGFHNYFSNST+VRLYY +GR Sbjct: 2 VFIWPFIHAFLAALITTWDVLPPTSKAYDLVPNHIVAKLGKNTTFDRVVKEWVRDTWRWGEPSLNPSIALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVSYMYIRSPTEDPVVTGLARHLSRVLLEVGPKGRVIHLAHSGGALLTYLVAKYHLKETDRRRIDVLNFGGARSITQKYFGKATNYYARNDPILLVNRRAMNLMQQLLNESADGEVIYLKHNTSFVFLQGRAGDALTDHSFIGPTYLMALNKEAAVFRRSYYRPYWLDGLIIAKPPDMGWARFVRKRVAAATGFHNYFSNSTLVRLYYGEDKGR 329
BLAST of NO08G01790 vs. NCBI_GenBank
Match: CBN75589.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 221.9 bits (564), Expect = 7.300e-54 Identity = 122/270 (45.19%), Postives = 167/270 (61.85%), Query Frame = 0 Query: 57 DTWRWGEPALNPSVALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVSFMYIRSPTEDPVVTGLAKHLSMVLREVGPKGRVVHLAHSGGALLTYLVAKYHLMESDRRRIDVINFGGARSITRKYF-GKATNYYARNDPILLVNRRAMHLMQQLLNESADGE----------VIYLKHNTSFVFLQGRSGDRFADHSLVGPTYLTALNKEAAAFRRSYYRAYWLEGLTVAKPPEMGWGRFVRKRVAAATGFHNYFS 316 D RW PA N V +T++NGI ++ E E + L +LFG VR +YNPS GWW+ D ++ + +R P + L HL+ + +VG +GRV+H+AHSGGAL+TYL A++HL R +IDV+ FGGARSITRKYF G+ NYYARNDP++ ++RRA LM +L N + E I KHNT+FVFL+GR+ DHSL GPTY AL KEA AFRR+++ ++ + R VRK+VA +G H++FS Sbjct: 38 DGRRW--PA-NDGVVITYINGIFHSVPEWESITQQLQALFGHEVRSFYNPSSGWWITDASKAGYHMLRKPANHTIAQALGDHLAQAVEDVG-RGRVLHIAHSGGALITYLAAQHHLTRRQRDKIDVVTFGGARSITRKYFSGRVVNYYARNDPLVKLDRRAAELM-KLTNNTKFQEGARRTKNGIWKINEKHNTTFVFLEGRARQFVLDHSLEGPTYQHALMKEAKAFRRAHFGPL----SPLSWDYDQSILRLVRKKVAQLSGLHDFFS 298
BLAST of NO08G01790 vs. NCBI_GenBank
Match: OEU17002.1 (hypothetical protein FRACYDRAFT_150988, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 122.1 bits (305), Expect = 7.900e-24 Identity = 84/222 (37.84%), Postives = 112/222 (50.45%), Query Frame = 0 Query: 68 PSVALTWVNGINYTNEEMEEQARFLSSLF-GCRVRPYYNPS-------LGWWLRDLTRVSFM-YIRSPTEDPVVTGLAKHLSMVLREVGPKGRVVHLAHSGGALLTYLVAKYHLMESDRRRIDVINFGGA---RSITRKYFGKATNYYARNDPILLVNRRAMHLMQQLLNESADGEVIYLKHNTSFVFLQGRSGDRFADHSLVGPTYLTALNKEAAAFRRSY 278 P LTWVNGI Y E ME A +S F G +V Y+NP+ + RDLT+ Y+ T + V GL +HL ++ V G VVH+AHS GAL+T L AK L + + +I+VI+FGGA RS + + NYY+ NDP+L LN S + + + F FL R GD ADH L+GPTY +AL E + Y Sbjct: 3 PKTRLTWVNGIGYNTEHMERDAPIISEYFGGKKVEWYHNPTSMVDETDTPGFYRDLTQAGQQKYLGRITSE--VNGLVQHLRDAVKSVS-SGVVVHIAHSQGALVTCLAAK-QLTQYEMNQIEVISFGGATPVRSTPETPWKRCLNYYSVNDPLL------------FLNPSVETALRSGFEDKEFCFLAPRIGDPVADHHLLGPTYASALEWEGKRYEHRY 208
BLAST of NO08G01790 vs. NCBI_GenBank
Match: XP_002177411.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51874.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 116.7 bits (291), Expect = 3.300e-22 Identity = 77/217 (35.48%), Postives = 109/217 (50.23%), Query Frame = 0 Query: 72 LTWVNGINYTNEEMEEQARFLSSLFGCRVRPY-YNPS-------LGWWLRDLTRVSFMYIRSPTEDPVVTGLAKHLSMVLREVGPKGRVVHLAHSGGALLTYLVAKYHLMESDRRRIDVINFGGARSI---TRKYFGKATNYYARNDPILLVNRRAMHLMQQLLNESADGEVIYLKHNTSFVFLQGRSGDRFADHSLVGPTYLTALNKEAAAFRRSY 278 LTW+NGI Y+ M+E +S FG + Y +NP+ + ++ DLT+ + T + V L +HL + VG G+V+H+AHS G L+TYL K L + +I+V+ FGGA ++ R F + NYY+ NDP+LL L+ E+A N F FL R GD DH L+ PTY AL E F+RSY Sbjct: 32 LTWINGIGYSELHMQEGQEEISKFFGGKPVMYCHNPTGMANEDDMIGYVTDLTQAGAQKLGRITAE--VKTLVQHLKDSVAAVGKNGKVIHIAHSQGVLITYLATK-QLTAVEMGQIEVLAFGGAAALLKTPRTPFHRCVNYYSVNDPLLL-----------LVPEAARALRTGFVGNNEFCFLAPRIGDPVQDHHLLNPTYAQALKWEGLRFQRSY 234
BLAST of NO08G01790 vs. NCBI_GenBank
Match: XP_002291356.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91463.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 112.5 bits (280), Expect = 6.300e-21 Identity = 78/214 (36.45%), Postives = 110/214 (51.40%), Query Frame = 0 Query: 72 LTWVNGINYTNEEMEEQARFLSSLFG-CRVRPYYNPSLGWWLRDLTRVSFMYIRSPTED-----PVVTGLAKHLSMVLREVGPKGRVVHLAHSGGALLTYLVAKYHLMESDRRRIDVINFGGARSI-TRKY-FGKATNYYARNDPILLVNRRAMHLMQQLLNESADGEVIYLKHNTSFVFLQGRSGDRFADHSLVGPTYLTALNKEAAAFRRSY 278 LTW+NGI + E M + +SS FG V +NP+ D I++ T P V L +HL L +VG GRV+H+AHS G+++T+L A+ L + RI+VI+FGGA +I T ++ F + NYYA NDPIL V A+ +Q + E +FL R+GD DH L+ PTYL AL E ++ Y Sbjct: 29 LTWINGIAHLPEHMLDPTFVISSAFGNVDVDYCHNPTAMSSESDYIGFVKDGIQASTHQMGRITPEVDNLVEHLRDALTKVGKSGRVIHIAHSQGSVITWLAAR-RLRPEECSRIEVISFGGAATICTSEFPFARCINYYAVNDPILNVVPSAVKALQSGFSFGGGME-------HEIIFLASRTGDPVTDHGLLNPTYLEALLWEGQRYQSLY 234
BLAST of NO08G01790 vs. NCBI_GenBank
Match: XP_005840697.1 (hypothetical protein GUITHDRAFT_132791 [Guillardia theta CCMP2712] >EKX53717.1 hypothetical protein GUITHDRAFT_132791 [Guillardia theta CCMP2712]) HSP 1 Score: 92.8 bits (229), Expect = 5.100e-15 Identity = 65/199 (32.66%), Postives = 94/199 (47.24%), Query Frame = 0 Query: 70 VALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVSFMYIRSPTEDPVVTGLAKHLSMVLREVGPKGRVVHLAHSGGALLTYLVAKYHLMESDRRRIDVINFGGARSITRKYFGKATNYYARNDPILLVNRRAMHLMQQLLNESADGEVIYLKHNTSFVFLQGRSGDRF--ADHSLVGPTYLTAL 267 V LT++NGI + A +S LFGC P++N + G L DL++ + I + E V LA+HL + LRE RI VI FGGA S+T +G NYY+ N+P+L ++ RA +++L E + + TSF+FL +G RF DHS +G TY+ AL Sbjct: 30 VRLTYINGIRTDKRDCLTAASVISGLFGCDCYPFWNKTAG-ALADLSQAARQKIFN-VETSEVKDLAEHLKLHLREA--------------------------------RILVIVFGGASSLTNDDYGDTVNYYSTNEPMLYIDARASKALKKLEAEGVASAQVE-QDGTSFIFLHPVAGGRFGLVDHSFLGATYMKAL 193
BLAST of NO08G01790 vs. NCBI_GenBank
Match: GAX26414.1 (hypothetical protein FisN_37Hh036 [Fistulifera solaris]) HSP 1 Score: 91.3 bits (225), Expect = 1.500e-14 Identity = 67/193 (34.72%), Postives = 97/193 (50.26%), Query Frame = 0 Query: 95 LFGCRVRPYYNPS-------LGWWLRDLTRVSFMYIRSPTEDPVVTGLAKHLSMVLREVGPKGRVVHLAHSGGALLTYLVAKYHLMESDRRRIDVINFGGA---RSITRKYFGKATNYYARNDPILLVNRRAMHLMQQLLNESADGEVIYLKHNTSFVFLQGRSGDRFADHSLVGPTYLTALNKEAAAFRRSY 278 +FG +V YNP+ + ++ DLT+ + T + V L +HL L++ P RVV +AHS GAL+TYL A L ++ +++V+ FGGA R+ R F + NYY+ NDPIL V A ++ L + F FL R GD DH L+ PTY +AL E+ F+R Y Sbjct: 1 MFGAKVHFCYNPTKMTNDQDVIGFMNDLTQAGTQKLGRLTLE--VESLVQHLREALQK-RPNERVVLIAHSQGALITYL-AVQQLNTTEIEKLEVLAFGGAAALRTTPRTPFKRCINYYSINDPILFVVPSAAQALRSGL------------AHEEFCFLSPRVGDPIVDHYLLSPTYKSALEWESQRFQREY 177
BLAST of NO08G01790 vs. NCBI_GenBank
Match: GAX19765.1 (hypothetical protein FisN_37Lh036 [Fistulifera solaris]) HSP 1 Score: 88.2 bits (217), Expect = 1.300e-13 Identity = 62/170 (36.47%), Postives = 87/170 (51.18%), Query Frame = 0 Query: 111 WLRDLTRVSFMYIRSPTEDPVVTGLAKHLSMVLREVGPKGRVVHLAHSGGALLTYLVAKYHLMESDRRRIDVINFGGA---RSITRKYFGKATNYYARNDPILLVNRRAMHLMQQLLNESADGEVIYLKHNTSFVFLQGRSGDRFADHSLVGPTYLTALNKEAAAFRRSY 278 ++ DLT+ + T + V L KHL L++ P RVV +AHS GAL+TYL A L ++ +++V+ FGGA R+ R F + NYY+ NDPIL V A ++ L + F FL R GD DH L+ PTY +AL E+ F+R Y Sbjct: 10 FVNDLTQAGTQKLGRLTLE--VESLVKHLRQALQK-RPNERVVLIAHSQGALITYL-AVQQLNTTEIEKLEVLAFGGAAALRTTPRTPFKRCINYYSINDPILFVVPSAAQALRSGL------------AHEEFCFLSPRVGDPIVDHYLLSPTYKSALEWESQRFQREY 163
BLAST of NO08G01790 vs. NCBI_GenBank
Match: EJK69361.1 (hypothetical protein THAOC_09392 [Thalassiosira oceanica]) HSP 1 Score: 81.6 bits (200), Expect = 1.200e-11 Identity = 53/137 (38.69%), Postives = 75/137 (54.74%), Query Frame = 0 Query: 130 PVVTGLAKHLSMVLREVGPKGRVVHLAHSGGALLTYLVAKYHLMESDRRRIDVINFGGARSITRKY--FGKATNYYARNDPILLVNRRAMHLMQQ-LLNESADGEVIYLKHNTSFVFLQGRSGDRFADHSLVGPTYL 264 P V L HL + LREVG GRV+H+ HS G+++T+L AK L + +RI++I+FGGA +IT + F + NYYA NDPIL V A+ ++ L GE +FL R+G D + + T L Sbjct: 52 PEVDTLVDHLRIALREVGKHGRVIHICHSQGSVITWLAAK-RLDSDECKRIEIISFGGAATITTQEFPFARCINYYAVNDPILNVVPSAVKALRSGYLFGGGLGE-------QEIIFLSSRTGVSVLDCACLSCTLL 180 The following BLAST results are available for this feature:
BLAST of NO08G01790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01790 ID=NO08G01790|Name=NO08G01790|organism=Nannochloropsis oceanica|type=gene|length=2666bpback to top protein sequence of NO08G01790.1 >NO08G01790.1-protein ID=NO08G01790.1-protein|Name=NO08G01790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=803bpback to top Synonyms
Publications
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