NO08G01520, NO08G01520 (gene) Nannochloropsis oceanica

Overview
NameNO08G01520
Unique NameNO08G01520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1990
Alignment locationchr8:476818..478807 -

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Properties
Property NameValue
DescriptionU3 small nucleolar rna-interacting protein 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:476818..478807 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0034511U3 snoRNA binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Homology
BLAST of NO08G01520 vs. NCBI_GenBank
Match: PSC75018.1 (U3 small nucleolar RNA-interacting 2 [Micractinium conductrix])

HSP 1 Score: 265.4 bits (677), Expect = 4.300e-67
Identity = 170/452 (37.61%), Postives = 233/452 (51.55%), Query Frame = 0
Query:   94 RVRLAKQYLAQMEAAMGSEDDGXXXXXXXXXVDGKDALGLLLEKERLKASGSLRRALAGSL-----------SNLAADSIPT--QVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVR-------------TATLSP-HWRGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHG----------GAG-------HWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNG 502
            R+RLAK YL+Q+ A   +E +               A+   L ++ L++ G L+R LA  L              AA +  T  ++++GH+LS T V +S D+R  F+ SKD AIL +D+E G R              AT +P  W      Q+    +LA AVSSDGR+LA GG DK++ IWD R R        + V+ F GH+DAV+ L FR  +H LYSGS DR +K W++D   YV+TLFGHQAE+ G+DA R ER V+C  DR+ RVWK+ +ES ++ K                  +++C   ++   + +G  DG ++LW   KK+PV  +  AH           GAG            V   +GTDL+ASG+ DGVVRLW       G   +L   G  LPA GFVN LA+  SG  L A  G+E R+GRW     A NG
Sbjct:   61 RLRLAKAYLSQVRAIEAAERE-PESDDEAGEAAAHGAMSERLRQDALESLGHLQRRLAQRLVVPPLPRVADWGGAAAGAAATGGRLLRGHRLSVTAVALSPDDRTLFSVSKDGAILSHDVEAGARQRFDSAAAGQGKEAATGTPADWVRRGPRQSGRNSLLAAAVSSDGRYLAVGGGDKKVHIWDARSR--------QCVRAFPGHKDAVTCLAFREGTHELYSGSLDRSIKQWSLDDGAYVDTLFGHQAEVLGLDALRAERCVSCAADRTCRVWKIPEESQLIFK--------------ASCMTIECCRYITGNEWASGSADGSVSLWAGTKKRPVFTMRGAHSDPNQDGEGAEGAGXXXXXXXXXXXXVGVCRGTDLLASGAGDGVVRLWGVVDAKGGSSKALEPLGG-LPARGFVNSLAIARSGRFLAAGLGQEPRMGRWLRDAAARNG 488          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: XP_002177522.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51985.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 262.7 bits (670), Expect = 2.800e-66
Identity = 140/343 (40.82%), Postives = 205/343 (59.77%), Query Frame = 0
Query:  165 QVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQGYQAHEK---EVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHI 505
            ++++GH L+PTCV +  D   A +GSKD++++ +D+ET  R   L P W+      +  +   EVL++A S DGR+ A G RD  +R++D+R R +        V+TF GH+ AV++L FR +S  L+SGS DRC++H+N+  M+Y+ETL+GHQ  +  +D  R ERPV+ G+DR+ R WKL +++H++             RG     S   V ++ ++ +VTG EDG LA+W  +KKK VA ++NAHG     I +V  + G+DLVASGS DG VR W+A+T        L   G  +P  G+VN +A G      VAA G+EHRLGRW     A N L I
Sbjct:  153 RLLRGHDLTPTCVALQSDGATAISGSKDHSVILWDIETASRKTHLCPVWKKETADSSKPRTVGEVLSVACSDDGRYAAVGSRDATVRVFDIRCRSQAL------VQTFTGHKGAVTSLAFRTNSLQLFSGSDDRCIRHYNLSEMLYIETLYGHQFGVTDLDCHRDERPVSVGKDRTARAWKLAEDTHLIF------------RGGSKLPSASSVTVVKDDWFVTGHEDGHLAMWKTDKKKAVAQIANAHGDDTE-IVAVQALPGSDLVASGSYDGYVRFWKASTGRTLAERGLQAVGE-IPLFGYVNDIAFGPKARFCVAAVGQEHRLGRWNRVAQAKNRLAI 475          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: XP_009516093.1 (hypothetical protein PHYSODRAFT_294254 [Phytophthora sojae] >EGZ28818.1 hypothetical protein PHYSODRAFT_294254 [Phytophthora sojae])

HSP 1 Score: 261.9 bits (668), Expect = 4.800e-66
Identity = 162/419 (38.66%), Postives = 231/419 (55.13%), Query Frame = 0
Query:   93 KRVRLAKQYLAQMEAAMGSEDDGXXXXXXXXXVDGKDA-LGLLLEKERLKASGSLRRALAGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQGYQAHEKE--VLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHILRLP 509
            KR+RLAK+YL ++ A      D           DG +A +G  L+++ L+A G L + +A S ++   D+  T+ +KGH+L  T + +  D + AF+ +KD ++L++DL    +T    P           +K+  +LA+A SSDG+FLA+GGRDK +R+WD+ E+GE +       ++FAGHRDAVSAL FR  SH                                  +D+  +ER V+CGRDRSVR+WK+ +E+ ++                   GS+DCV M+++E YVTGG+DG L+LW   +KKPV ++ NAH   G WISSVA +  TDL+ASGS DG +RLWQA      Q  +LT   T +P  GFVNGL        L+A  G+EHRLGRW   K   NG+ I+ LP
Sbjct:   70 KRLRLAKEYLGKITAQEAGGTDAEEDDE-----DGVEACVGARLQQDALEAMGKLFKQVAASYADFEFDADSTKFLKGHRLPVTSLCLLEDGKTAFSAAKDGSLLRWDLAEQKKTKLSLPADDVAADKCKTDKDRCILALAASSDGKFLASGGRDKLVRVWDV-EKGELQ-------ESFAGHRDAVSALAFRLRSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSLYKERVVSCGRDRSVRMWKIPEETQLVF--------------YGNSGSMDCVKMVTDEYYVTGGDDGSLSLWFNGRKKPVCVIPNAHD--GKWISSVAVMPRTDLIASGSSDGQIRLWQADL----QARTLTAV-TSIPLEGFVNGLCFDSKARFLLAGVGQEHRLGRWEKLK-VKNGIAIIALP 453          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: XP_008895592.1 (hypothetical protein PPTG_04975 [Phytophthora parasitica INRA-310] >ETI38250.1 hypothetical protein F443_15965 [Phytophthora parasitica P1569] >ETK78460.1 hypothetical protein L915_15515 [Phytophthora parasitica] >ETL31891.1 hypothetical protein L916_15413 [Phytophthora parasitica] >ETL85120.1 hypothetical protein L917_15237 [Phytophthora parasitica] >ETM38280.1 hypothetical protein L914_15378 [Phytophthora parasitica] >ETN19773.1 hypothetical protein PPTG_04975 [Phytophthora parasitica INRA-310] >ETO67051.1 hypothetical protein F444_15947 [Phytophthora parasitica P1976] >ETP08125.1 hypothetical protein F441_15804 [Phytophthora parasitica CJ01A1] >ETP36186.1 hypothetical protein F442_15812 [Phytophthora parasitica P10297])

HSP 1 Score: 261.9 bits (668), Expect = 4.800e-66
Identity = 162/429 (37.76%), Postives = 239/429 (55.71%), Query Frame = 0
Query:   94 RVRLAKQYLAQMEA--AMGSEDDGXXXXXXXXXVDG-KDALGLLLEKERLKASGSLRRALAGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQGYQAHEKE--VLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHILRLPFEEGSKGEG 518
            R+RLAK+YL ++ A  A G++D+           DG ++ +G  L+++ L+A G L + +A   +    D+  T+ +KGH+L  T + +  D + AF+ +KD ++L++DL    +T    P+          +K+  +LA+A SSDG+FLA+GGRDK +R+WD+ E+GE +       ++FAGHRDAVSAL FR  S                                   +D+  +ER V+CGRDRSVR+WK+ +E+ ++                   GS+DCV M+++E YVTGG+DG L+LW   +KKPV ++ NAH   G WISSVA +  TDL+ASGS DG +RLWQA      QG +LT   + +P  GFVN L+       L+A  G+EHRLGRW   K   NG+ I+ LP  +G + EG
Sbjct:   68 RLRLAKEYLGKITAQEAGGTDDESDEG-------DGVEERVGARLQQDALEAMGKLFKKVAADYTEFEFDADSTKFLKGHRLPVTSLCLLEDGKTAFSAAKDGSLLRWDLAQQKKTKLTLPNDDVAAEKATTDKDRCILALAASSDGKFLASGGRDKLVRVWDV-EKGELQ-------ESFAGHRDAVSALAFRLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSLYKERVVSCGRDRSVRMWKIPEETQLVF--------------YGNSGSMDCVKMVTDEYYVTGGDDGSLSLWFNGRKKPVCVIPNAHD--GKWISSVAVMPRTDLIASGSSDGQIRLWQADL----QGRTLTPVAS-IPLEGFVNALSFDAKARFLLAGVGQEHRLGRWEKLK-VKNGIAIIALPSIDGEQAEG 459          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: KUF79249.1 (U3 small nucleolar RNA-interacting protein 2 [Phytophthora nicotianae] >KUG00318.1 U3 small nucleolar RNA-interacting protein 2 [Phytophthora nicotianae])

HSP 1 Score: 261.9 bits (668), Expect = 4.800e-66
Identity = 162/429 (37.76%), Postives = 239/429 (55.71%), Query Frame = 0
Query:   94 RVRLAKQYLAQMEA--AMGSEDDGXXXXXXXXXVDG-KDALGLLLEKERLKASGSLRRALAGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQGYQAHEKE--VLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHILRLPFEEGSKGEG 518
            R+RLAK+YL ++ A  A G++D+           DG ++ +G  L+++ L+A G L + +A   +    D+  T+ +KGH+L  T + +  D + AF+ +KD ++L++DL    +T    P+          +K+  +LA+A SSDG+FLA+GGRDK +R+WD+ E+GE +       ++FAGHRDAVSAL FR  S                                   +D+  +ER V+CGRDRSVR+WK+ +E+ ++                   GS+DCV M+++E YVTGG+DG L+LW   +KKPV ++ NAH   G WISSVA +  TDL+ASGS DG +RLWQA      QG +LT   + +P  GFVN L+       L+A  G+EHRLGRW   K   NG+ I+ LP  +G + EG
Sbjct:   68 RLRLAKEYLGKITAQEAGGTDDESDEG-------DGVEERVGARLQQDALEAMGKLFKKVAADYTEFEFDADSTKFLKGHRLPVTSLCLLEDGKTAFSAAKDGSLLRWDLAQQKKTKLTLPNDDVAAEKATTDKDRCILALAASSDGKFLASGGRDKLVRVWDV-EKGELQ-------ESFAGHRDAVSALAFRLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSLYKERVVSCGRDRSVRMWKIPEETQLVF--------------YGNSGSMDCVKMVTDEYYVTGGDDGSLSLWFNGRKKPVCVIPNAHD--GKWISSVAVMPRTDLIASGSSDGQIRLWQADL----QGRTLTPVAS-IPLEGFVNALSFDAKARFLLAGVGQEHRLGRWEKLK-VKNGIAIIALPSIDGEQAEG 459          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: GAX81002.1 (hypothetical protein CEUSTIGMA_g8437.t1 [Chlamydomonas eustigma])

HSP 1 Score: 260.0 bits (663), Expect = 1.800e-65
Identity = 194/570 (34.04%), Postives = 269/570 (47.19%), Query Frame = 0
Query:   43 FNLDQRSSHNNDDEY---IDDVVSGSEDELPRKKGRAAETDTAEMEDRETAAEKRVRLAKQYLAQMEAAMGSEDDG------XXXXXXXXXVDGKDALGLLLEKERLKASGSLRRALA----------------------GSLSNLAA-DSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLET---------------------------GVRTATLSPHWRGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGG----------AGH--------------------------------WISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHILRLPFEE 512
            +  D R     DD +    +D      DE   KK + AE          T  EKR+RLA+ YL +M+A +  +  G        XXXXXXX      L   L+++  +ASG ++R LA                      GSL++ AA  +  + V KGH L  T V +S D+  A T SKD +IL++DL T                           G    +  P W      QA +K + A A+SSD + LA GG D+++ ++D +        S   ++++ GHRD +SAL FR  +H L+SGS+DR +K W++D   Y++TLFGHQAE+  +D  R ER VT G DRS R+WK+ +ES ++ + P                S DC+  +S+   V+GG DG L +WN  +KKP++I+  AHG           AG+                                W+ SVA    +DLVASG+ DG VRLW+      G    L+  G  LP  G VNGLAL  SGTLLVAA G+E RLGRW     A NG+ + RL   E
Sbjct:   14 YGADARKKSKKDDGFDAVNEDFFLADNDE--GKKVQDAE--XXXXXXXXTVEEKRLRLARAYLDKMQAEVDMDKQGPSGAGQSDXXXXXXXXXXXXVLAKRLKQDAAEASGRVQRKLAHRMVLPSFEDPPEASTSQQSLQGSLTSSAAFTAARSAVKKGHNLPATAVVLSTDDSFAVTVSKDGSILKWDLSTMQKSRLYRPGDKREGADVSTGSKASHKGEEEQSAGPEWMRRNPRQASKKGLYAAALSSDNKLLAVGGGDRKVHVFDAQ--------SGSFLQSYPGHRDIISALAFREGTHQLFSGSYDRTVKMWSLDDKAYMDTLFGHQAEVLSLDLLRAERAVTGGNDRSCRIWKVPEESQLVFRAP--------------SMSTDCIRFISQGEVVSGGNDGTLQIWNQLRKKPLSIIKEAHGQRSVLHHGGSCAGYMCSQQGSVLPSAATEAAGAVPVSSQQIPDVTGWVQSVAVCHNSDLVASGASDGTVRLWKVEKNKMGGAQDLSCLGG-LPVRGCVNGLALSRSGTLLVAAVGQEPRLGRWMRDGKAKNGIVVYRLQVRE 556          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: XP_002945906.1 (hypothetical protein VOLCADRAFT_55218 [Volvox carteri f. nagariensis] >EFJ52901.1 hypothetical protein VOLCADRAFT_55218 [Volvox carteri f. nagariensis])

HSP 1 Score: 259.6 bits (662), Expect = 2.400e-65
Identity = 149/377 (39.52%), Postives = 210/377 (55.70%), Query Frame = 0
Query:  140 LKASGSLRRALAGSLSNLAADSIPTQ---VIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHG---GAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHILRLPFE 511
            ++A+G L+R LA  +  LA   +        +GH+LS T V ++ D+  A+T SKD +I ++D+ET  RT      W   +        + A+AVSSDGR+LA GG D ++ ++   E   G  L     + F GH+D V+ L FR  +H L S S DR +K W++D   Y++TL+GHQ+E+  +D  R ER +T G D + R+WKL +ES ++ +    V              LDCV  ++   +V+GG DG L LW+  KKKPV +   AHG   G   W++SVA  + +DLVASG+ DG +RLW    +  G    L   G  LP  GFVNGLA+  SG  LVAA G+E R+GRWA    A NGL + RL  E
Sbjct:   64 VQAAGRLQRRLAHRVRVLAPGDLGYSEPCCSRGHRLSATAVALTADDATAYTVSKDGSICRWDVETMKRTHLTPAEWVARKARSTSRAALSAVAVSSDGRYLAVGGGDHKVHVF---EASSGTYL-----QGFPGHKDLVTGLAFRCGTHTLASCSADRTVKLWSLDDRAYMDTLYGHQSEVLALDFLRAERLLTAGHDHTCRLWKLPEESQLIFRAHDRV--------------LDCVRFVTGTEWVSGGCDGGLHLWSHLKKKPVFVARGAHGTEAGTHGWVTSVAVCRNSDLVASGAGDGAIRLWSVNPSKTGGAGGLACIGA-LPQRGFVNGLAIARSGRFLVAAVGQEPRMGRWARDARARNGLALHRLGLE 417          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: OZJ05442.1 (hypothetical protein BZG36_01634 [Bifiguratus adelaidae])

HSP 1 Score: 259.6 bits (662), Expect = 2.400e-65
Identity = 167/471 (35.46%), Postives = 255/471 (54.14%), Query Frame = 0
Query:   53 NDDEYIDDVVSGSEDELPRKKGRAAETDTAEMEDRETAAEKRVRLAKQYLAQMEAAMGSEDDGXXXXXXXXXVDGKDALGLLLEKERLKASGSLRRALAGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTC-GRDRSVRVWKLVDESHMLLKCPQGV-GEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHG------------GAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAAC--GKEHRLGRWAPQKGAVNGLHILRL 508
            +D E  D+ V G +D     +G   E    E E  ETAAEKR+RLAK YL  +     + ++          VD +D +   L+K+ L+ +G + + +A  L  L  D    +  KGH+L  T + I    R+A++GSKD +I+++ L    R  T     +    Y+ H   VL +A S+DG+F+A+GG D  + IW ++E         + V  +  H+DAV+++ FR  S+ LY+ S+DR +K +N+D + Y+ETLFGHQ  I G+D  + ER V+  GRDR+VR WK+V+ES ++ +       + G+G  + + GS D V  L E ++++GG+ G L LW++NKKKPV    ++HG               H I S+AT+  +DL+A+GS D  VRLW  +   +     L   G  +P  G VNGL+L   G  ++  C  G+E RLGRW   K A NG+  + L
Sbjct: 1255 DDIEESDEDVGGLDD--MDLRGSEGEESLDEEELNETAAEKRLRLAKDYLQTLR----NREEEDVGGFMAEDVD-RDIIADRLKKDALERTGKVHKFIASKL-QLPVDVERIKSKKGHQLPVTAIVICEQGRVAYSGSKDGSIIKWSLPDLERLHTFVGGRKNLNQYEGHTAPVLCLAASTDGQFIASGGADNRVCIWSVKEN--------RYVGGWRQHKDAVASVAFRHGSNQLYTASYDRTIKLYNVDALSYIETLFGHQDTILGIDTLQEERCVSAGGRDRTVRYWKIVEESQLVFRGGASFRNKDGSGTAISVEGSTDAVVCLGESNFISGGDSGALCLWDLNKKKPVYTQHHSHGFREHESQSEGTITTPHPILSIATLPYSDLIATGSTDDFVRLWHVSKDMR----KLESIGA-IPMKGCVNGLSLAQIGRQIILCCAVGQEMRLGRWERMKDAKNGVRCVIL 1704          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: KNZ72506.1 (hypothetical protein J132_02933 [Termitomyces sp. J132])

HSP 1 Score: 256.9 bits (655), Expect = 1.500e-64
Identity = 193/536 (36.01%), Postives = 282/536 (52.61%), Query Frame = 0
Query:   13 RGRGRGGSLGSGERS---TTRVGGGPGGAWRASFNLDQRSSHNNDDEYIDDVVSGSEDELPRKKGRAAETD---TAEMEDRETAAEKRVRLAKQYLAQMEAAMGSEDDGXXXXXXXXXVDGKDALGLLLEKERLKASGSLRRALAGSLS---NLAADSIPTQVI--KGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATL----SPHWR-GGQG-------YQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMV--YVETLFGHQAEINGMDAWRRERPVTC-GRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHG------------GAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLAL--------GHSGTLLVAACGKEHRLGRWAPQK-GAVNG 502
            R R   G+ GS  RS   ++R G   G A   S  ++        DE + +     E  +     RA E D   + E +D ET AEKR+RLAK YL  ++ ++    DG            K+ +   L+++ L+ SG +   +A S      L    +PT+V+  +GH+ S T    S   +  FT  K+ AI+Q+DL TG R  T      P+ +  G+G        + H  EVLA+AVS DG++LA+ G+D+++ +WD+      KG  +K      GH+D +SAL FR  +H LY+GSFDR LK +++   V  YVETLFGHQ  I  +DA R E  V+  GRD++VR WK+V+E+ ++ +       GG      + GS++CVAM+ E ++V+GG+ G L LW+  KKKPV   + AHG                WI+SVA+++ +D++ASGS +G VR+W+     +    S +  GT +PAPG VN L L        G    LL+A  G+EHR GRW   K G VNG
Sbjct:   14 RKRTDSGAKGSSSRSAIKSSRKGPPQGLAKHGSSKVNNVQKTKLADEELSEHTDEGEGGIDDMDLRAEEEDLGASGEEDDEETPAEKRLRLAKLYLESVKESLA---DGEFDAAEI----DKELISARLKQDVLEHSGKVHLFVADSFETSFTLNFTQVPTKVLRTRGHRFSVTSAVASESGKHLFTSGKEGAIIQWDLATGKRLMTFHKVRPPNSKEKGKGKAQVDLSIKGHTDEVLALAVSGDGQYLASAGKDRKLVVWDVE-----KGEWIKAFGGNLGHKDTISALSFRKGTHQLYTGSFDRTLKVYDLSPSVMGYVETLFGHQDHILSVDALRGETCVSVGGRDKTVRYWKIVEETQLVFR-------GGGRMKKFIEGSIECVAMIDETTFVSGGDSGSLCLWSTLKKKPVFTQALAHGFNEVHSETEGLIRTPRWITSVASLRYSDVIASGSWEGDVRIWKLDPKLK----SFSLVGT-IPAPGVVNSLQLLSPPPEKGGTQPILLIAGMGQEHRFGRWLNLKEGVVNG 525          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: PRP73176.1 (u3 small nucleolar RNA-interacting protein 2-like [Planoprotostelium fungivorum])

HSP 1 Score: 256.5 bits (654), Expect = 2.000e-64
Identity = 150/417 (35.97%), Postives = 224/417 (53.72%), Query Frame = 0
Query:   88 ETAAEKRVRLAKQYLAQMEAAMGSEDDGXXXXXXXXXVDGKDALGLLLEKERLKASGSLRRALAGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQG--YQAHEKEVLAIAVSSDGRFLAAGGRDK--EIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVN 501
            E+A E R+RLAK YL ++E AM  E  G         +D KD +   +  +     G  +  +A  L  L          KGH  + T V IS DE   +T SKD  I+++D+E+  +  T S      +    + H  E+L +A+SSD + LA+GG DK  +IR+WDL E         K ++   GHRD +S L F+  S  LYSGS+DR LK WN    +Y++TLFGH  ++  +D+  +E PV+ G  ++V +W++  E+ +        G   A         ++CV+M  E ++VTGG+DG L++W  +KK+P   V  AHG    WIS+VA +  +DL  SGS DG +R W+ T   +  G+S+T     LP  G++N L++  +G  L    G++HRLGRW P +GA N
Sbjct:  297 ESAEEARLRLAKGYLEKLEDAMSKE--GMDGGIDAEQMD-KDNMAARIRDDVADMRGKYKHIVAAKLVKLELRDEDIITFKGHSRAVTAVVISEDESTLYTASKDCNIIRWDVESKKKVFTFSGKKVNSEKKFSKGHNGEILTLALSSDAKLLASGGTDKGHQIRLWDLGEN--------KHLENLVGHRDVISCLAFKKGSAQLYSGSYDRTLKIWNAKSGLYMDTLFGHGDKVIAVDSLYKENPVSTGEGKAVHLWRIERETQLAFH-----GHSSA---------VECVSMFDESTFVTGGQDGDLSVWVTSKKRPAGTVHKAHGAEAPWISAVAALPFSDLFVSGSCDGFLRFWKVTLGGE-SGASITCV-MQLPMEGWINSLSISPNGRTLAVGIGRDHRLGRWHPIEGAKN 686          
The following BLAST results are available for this feature:
BLAST of NO08G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PSC75018.14.300e-6737.61U3 small nucleolar RNA-interacting 2 [Micractinium... [more]
XP_002177522.12.800e-6640.82predicted protein, partial [Phaeodactylum tricornu... [more]
XP_009516093.14.800e-6638.66hypothetical protein PHYSODRAFT_294254 [Phytophtho... [more]
XP_008895592.14.800e-6637.76hypothetical protein PPTG_04975 [Phytophthora para... [more]
KUF79249.14.800e-6637.76U3 small nucleolar RNA-interacting protein 2 [Phyt... [more]
GAX81002.11.800e-6534.04hypothetical protein CEUSTIGMA_g8437.t1 [Chlamydom... [more]
XP_002945906.12.400e-6539.52hypothetical protein VOLCADRAFT_55218 [Volvox cart... [more]
OZJ05442.12.400e-6535.46hypothetical protein BZG36_01634 [Bifiguratus adel... [more]
KNZ72506.11.500e-6436.01hypothetical protein J132_02933 [Termitomyces sp. ... [more]
PRP73176.12.000e-6435.97u3 small nucleolar RNA-interacting protein 2-like ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008896NSK008896Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01520.1NO08G01520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100001g55gene3904Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01520.1NO08G01520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01520 ID=NO08G01520|Name=NO08G01520|organism=Nannochloropsis oceanica|type=gene|length=1990bp
AAAAAATAGCACCATGTCACGAAGAAAAATCTTCGGTGGCACCGGAGTGC
GCGGCCGGGGCCGTGGAGGAAGCCTCGGCAGTGGTGAACGCAGCACTACA
CGCGTTGGTGGTGGGCCAGGCGGTGCTTGGCGCGCCAGCTTTAACTTGGA
CCAGAGAAGCAGCCACAACAATGACGACGAGTACATTGACGATGTTGTCT
CAGGGTCCGAGGACGAGTTGCCGCGTAAAAAGGGCCGTGCGGCTGAGACA
GACACAGCCGAGATGGAGGACCGGGAGACGGCGGCGGAGAAACGCGTGCG
TCTAGCCAAGCAATACCTGGCACAAATGGAGGCAGCCATGGGCAGCGAAG
ACGATGGAGAGGGCTCAGGTGAAGGTGAAGATGACGTTGACGGAAAGGAT
GCGTTGGGCCTTCTGTTGGAAAAGGAACGGCTCAAGGCCTCTGGCTCGCT
CCGACGCGCCCTAGCCGGCAGCCTGAGTAATCTTGCCGCTGACAGCATTC
CTACCCAGGTTATAAAAGGGCATAAGCTTTCACCGACTTGTGTCACGATA
AGTAGAGACGAGCGCATTGCGTTTACGGGGAGCAAGGACAATGCCATTCT
GCAGTATGATTTGGAGACCGGTGTACGGACCGCCACGCTCTCCCCACACT
GGCGGGGTGGCCAGGGATACCAAGCCCACGAGAAGGAAGTGCTGGCAATA
GCGGTGTCATCGGACGGGAGGTTTCTAGCAGCAGGAGGGAGGGATAAGGA
GATTAGAATTTGGGATCTAAGGGAGCGGGGTGAGGGGAAAGGGCTGTCGC
TGAAGCCGGTGAAGACATTTGCGGGCCATCGGGATGCGGTTTCTGCGCTT
TGTTTTCGTGCGGACTCCCATGCGTTGTACTCGGGGTCGTTTGACCGGTG
TTTGAAGCATTGGAACATGGATGGGATGGTGTATGTCGAGACATTGTTTG
GGCATCAGGCGGAGATAAATGGCATGGATGCGTGGAGGAGGGAGCGACCG
GTGACCTGTGGGAGGGATCGGAGCGTGCGGGTGTGGAAATTGGTGGACGA
ATCACACATGTTGCTGAAATGCCCACAGGGTGTGGGAGAGGGAGGGGCGG
GGAGGGGTTTGGTGATGGGGGGGTCTTTGGATTGTGTGGCGATGCTATCG
GAGGAATCTTATGTAACGGGGGGGGAGGACGGAATGCTTGCTTTGTGGAA
TGTGAATAAGAAGAAGCCGGTGGCGATCGTGTCAAATGCACATGGAGGGG
CCGGGCATTGGATAAGTAGTGTTGCGACGATCAAGGGGACGGATTTAGTG
GCTTCAGGGTCGGATGATGGGGTGGTGCGGCTATGGCAGGCGACGACAAC
AGCTCAAGGGCAGGGGTCATCTTTGACATTCACAGGCACGATGTTGCCGG
CTCCGGGGTTTGTGAATGGCTTGGCGCTTGGTCATTCGGGAACATTGTTG
GTAGCGGCGTGTGGGAAAGAGCATCGCTTGGGAAGGTGGGCGCCGCAGAA
AGGAGCGGTAAATGGACTGCATATCCTGAGGTTGCCATTTGAGGAGGGGA
GTAAGGGAGAGGGGCGTAGTGGTGGTAGTAGTGGTGGTGAGAGTGGAAGC
GAAGAGGAGGATGAAGAGGATGAGGAGGAAGGGGAGGAGGAGGAGTATCC
TAATATGGGGGAGAACGAGGATGGAGAGGGAGTGGAAGAGGAGGAAGGGG
AGGAGGAGGAAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGATGA
CGACGATGACGACGAGTGAACAAATCCATTCCAAATCCAATATTCCCCCC
CTTCTCAATCTTGTAAAGAGGTCCCGAAAACTTACAAAACGTAAATGCTC
GCGTCAAGTCTAGAGCATAATCTGAAAAAGAAGTAGATCAGAGAATGCGT
CAGCAAAGCATATTTTTTACAAGTAAGCGAAGCATGCTCA
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protein sequence of NO08G01520.1

>NO08G01520.1-protein ID=NO08G01520.1-protein|Name=NO08G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=602bp
MSRRKIFGGTGVRGRGRGGSLGSGERSTTRVGGGPGGAWRASFNLDQRSS
HNNDDEYIDDVVSGSEDELPRKKGRAAETDTAEMEDRETAAEKRVRLAKQ
YLAQMEAAMGSEDDGEGSGEGEDDVDGKDALGLLLEKERLKASGSLRRAL
AGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDL
ETGVRTATLSPHWRGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIW
DLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHW
NMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHML
LKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKK
KPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQ
GSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVN
GLHILRLPFEEGSKGEGRSGGSSGGESGSEEEDEEDEEEGEEEEYPNMGE
NEDGEGVEEEEGEEEEGEEEEEEEEEEEEEEEEEEEEEEEEEEEDDDDDD
E*
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Synonyms
Publications