NO08G01350, NO08G01350 (gene) Nannochloropsis oceanica

Overview
NameNO08G01350
Unique NameNO08G01350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1301
Alignment locationchr8:407063..408363 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:407063..408363 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO08G01350 vs. NCBI_GenBank
Match: XP_018259750.1 (hypothetical protein I303_07818 [Kwoniella dejecticola CBS 10117] >OBR81908.1 hypothetical protein I303_07818 [Kwoniella dejecticola CBS 10117])

HSP 1 Score: 82.0 bits (201), Expect = 1.700e-12
Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   74 GGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEE 147
            GGG  + FP  +WTPSGGW++ P NW  NT + + GIG+A    +  SAS E+R IAP   IPSQ W   A E
Sbjct:    6 GGGAHYPFPKEVWTPSGGWWSRPSNWATNTAICVFGIGIATFGVWRLSASKEQRHIAPTRAIPSQRWSPQARE 78          
BLAST of NO08G01350 vs. NCBI_GenBank
Match: OWZ59727.1 (hypothetical protein C356_00738 [Cryptococcus neoformans var. grubii c45] >OXB39478.1 hypothetical protein J007_00731 [Cryptococcus neoformans var. grubii] >OXC65076.1 hypothetical protein C358_00730 [Cryptococcus neoformans var. grubii MW-RSA852])

HSP 1 Score: 82.0 bits (201), Expect = 1.700e-12
Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 0
Query:   73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEE 147
            MGGG  + +P  +WTPSGGW+  P NWK+NT + + GI +A    +  SA+ E R IAP   IPSQ W + A E
Sbjct:    1 MGGGAQYPYPKEVWTPSGGWWTRPSNWKSNTAICIVGITIATFGVWRLSANREERHIAPTRPIPSQMWSRQARE 74          
BLAST of NO08G01350 vs. NCBI_GenBank
Match: XP_012046405.1 (hypothetical protein CNAG_00715 [Cryptococcus neoformans var. grubii H99] >AFR92845.2 hypothetical protein CNAG_00715 [Cryptococcus neoformans var. grubii H99] >OWT37912.1 hypothetical protein C362_04936 [Cryptococcus neoformans var. grubii Bt1] >OWZ36632.1 hypothetical protein C347_00807 [Cryptococcus neoformans var. grubii AD2-60a] >OWZ48302.1 hypothetical protein C343_00731 [Cryptococcus neoformans var. grubii C23] >OWZ56010.1 hypothetical protein C353_00737 [Cryptococcus neoformans var. grubii AD1-83a] >OWZ58071.1 hypothetical protein C368_01244 [Cryptococcus neoformans var. grubii 125.91] >OWZ61263.1 hypothetical protein AYX15_06516 [Cryptococcus neoformans var. grubii] >OWZ70111.1 hypothetical protein AYX14_04513 [Cryptococcus neoformans var. grubii] >OWZ80896.1 hypothetical protein C365_00722 [Cryptococcus neoformans var. grubii Bt85] >OXC68575.1 hypothetical protein AYX13_02779 [Cryptococcus neoformans var. grubii] >OXC86931.1 hypothetical protein C344_00738 [Cryptococcus neoformans var. grubii AD1-7a] >OXG23346.1 hypothetical protein C366_00726 [Cryptococcus neoformans var. grubii Tu401-1] >OXG29076.1 hypothetical protein C361_00731 [Cryptococcus neoformans var. grubii Tu259-1] >OXG34125.1 hypothetical protein C367_00732 [Cryptococcus neoformans var. grubii Ze90-1] >OXG40996.1 hypothetical protein C360_00780 [Cryptococcus neoformans var. grubii Bt15] >OXG45660.1 hypothetical protein C359_00347 [Cryptococcus neoformans var. grubii Bt120] >OXG54328.1 hypothetical protein C355_00727 [Cryptococcus neoformans var. grubii Th84] >OXG68407.1 hypothetical protein C351_00738 [Cryptococcus neoformans var. grubii c8] >OXG68969.1 hypothetical protein C354_00740 [Cryptococcus neoformans var. grubii MW-RSA1955] >OXG72295.1 hypothetical protein C352_00736 [Cryptococcus neoformans var. grubii CHC193] >OXG88351.1 hypothetical protein C350_00725 [Cryptococcus neoformans var. grubii MW-RSA36] >OXG91921.1 hypothetical protein C349_00708 [Cryptococcus neoformans var. grubii Br795] >OXG96077.1 hypothetical protein C346_00729 [Cryptococcus neoformans var. grubii D17-1] >OXG99609.1 hypothetical protein C345_00464 [Cryptococcus neoformans var. grubii A2-102-5] >OXH18328.1 hypothetical protein J010_00706 [Cryptococcus neoformans var. grubii] >OXH18367.1 hypothetical protein C369_00735 [Cryptococcus neoformans var. grubii A5-35-17] >OXH20101.1 hypothetical protein C370_00730 [Cryptococcus neoformans var. grubii A1-35-8] >OXH38065.1 hypothetical protein J009_00728 [Cryptococcus neoformans var. grubii] >OXH39114.1 hypothetical protein J005_00737 [Cryptococcus neoformans var. grubii] >OXH41336.1 hypothetical protein J008_00725 [Cryptococcus neoformans var. grubii] >OXH58742.1 hypothetical protein J003_00731 [Cryptococcus neoformans var. grubii] >OXH59309.1 hypothetical protein J004_00762 [Cryptococcus neoformans var. grubii] >OXH62624.1 hypothetical protein J002_00725 [Cryptococcus neoformans var. grubii] >OXH74869.1 hypothetical protein J000_00727 [Cryptococcus neoformans var. grubii] >OXH75744.1 hypothetical protein J001_00727 [Cryptococcus neoformans var. grubii] >OXL11207.1 hypothetical protein C348_00726 [Cryptococcus neoformans var. grubii Gb118] >OXM81753.1 hypothetical protein C364_00725 [Cryptococcus neoformans var. grubii Bt63] >AUB22323.1 ARF guanyl-nucleotide exchange factor [Cryptococcus neoformans var. grubii])

HSP 1 Score: 81.6 bits (200), Expect = 2.200e-12
Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEE 147
            MGGG  + +P  +WTPSGGW+  P NWK NT + + GI +A    +  SA+ E R IAP   IPSQ W + A E
Sbjct:    1 MGGGAQYPYPKEVWTPSGGWWTRPSNWKGNTAICIVGITIATFGVWRLSANREERHIAPTRPIPSQMWSRQARE 74          
BLAST of NO08G01350 vs. NCBI_GenBank
Match: KGB75375.1 (hypothetical protein CNBG_1213 [Cryptococcus gattii VGII R265] >KIR30791.1 hypothetical protein I309_00142 [Cryptococcus gattii VGII LA55] >KIR35742.1 hypothetical protein I352_02020 [Cryptococcus gattii VGII MMRL2647] >KIR72702.1 hypothetical protein I310_03303 [Cryptococcus gattii VGII CA1014] >KIR95117.1 hypothetical protein I304_01444 [Cryptococcus gattii VGII CBS 10090] >KIS00361.1 hypothetical protein L804_01773 [Cryptococcus gattii VGII 2001/935-1])

HSP 1 Score: 81.3 bits (199), Expect = 2.900e-12
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEE 147
            MGGG  + +P  +WTPSGGW++ P NWK NT + + GI +A    +  SA+ E R  AP   IPSQ W + A E
Sbjct:    1 MGGGAQYPYPKEVWTPSGGWWSRPSNWKGNTAICIAGITIATFGVWRLSANREERHAAPTRPIPSQMWSRQARE 74          
BLAST of NO08G01350 vs. NCBI_GenBank
Match: PAV18230.1 (hypothetical protein PNOK_0671600 [Phellinus noxius])

HSP 1 Score: 81.3 bits (199), Expect = 2.900e-12
Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 0
Query:   73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAE 146
            MGGG  + +P  +W+P+GGW+  P NWK+NT VA GGI L   +T+  SAS E R +AP+  IPS  W K  E
Sbjct:    1 MGGGGQYPYPKEVWSPAGGWWTRPSNWKSNTAVAFGGILLTVYATWQLSASKEVRHVAPSKPIPSMLWAKQYE 73          
BLAST of NO08G01350 vs. NCBI_GenBank
Match: XP_002504370.1 (hypothetical protein MICPUN_113359 [Micromonas commoda] >ACO65628.1 hypothetical protein MICPUN_113359 [Micromonas commoda])

HSP 1 Score: 80.1 bits (196), Expect = 6.500e-12
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 0
Query:   85 IWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEE 147
            +W+P+GGWFA PK+WK NT +  G + +A+   F++S  LE+RP+AP   IPSQ+WCK+  E
Sbjct:   12 VWSPAGGWFADPKHWKRNTAMGFGVLAVASAMIFNYSRKLEQRPLAPTRRIPSQAWCKNFPE 73          
BLAST of NO08G01350 vs. NCBI_GenBank
Match: XP_024511993.1 (hypothetical protein CNA06940 [Cryptococcus neoformans var. neoformans JEC21] >AAW41192.2 hypothetical protein CNA06940 [Cryptococcus neoformans var. neoformans JEC21])

HSP 1 Score: 80.1 bits (196), Expect = 6.500e-12
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEE 147
            MGGG  + +P  +WTPSGGW++ P NWK NT + + GI +A    +  SA+ E R  AP   IPSQ W + A E
Sbjct:    1 MGGGAQYPYPKEVWTPSGGWWSRPSNWKGNTAICIVGITIATFGVWRLSANREERHTAPTRPIPSQMWSRQARE 74          
BLAST of NO08G01350 vs. NCBI_GenBank
Match: KIR42473.1 (hypothetical protein I313_01698 [Cryptococcus gattii VGII Ram5] >KIY59877.1 hypothetical protein I307_00952 [Cryptococcus gattii VGII 99/473])

HSP 1 Score: 79.7 bits (195), Expect = 8.500e-12
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 0
Query:   73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEE 147
            MGGG  + +P  +WTPSGGW++ P NWK NT + + GI +A    +  SA+ E R  AP   IPSQ W +   E
Sbjct:    1 MGGGAQYPYPKEVWTPSGGWWSRPSNWKGNTAICIAGITIATFGVWRLSANREERHAAPTRPIPSQMWSRQTRE 74          
BLAST of NO08G01350 vs. NCBI_GenBank
Match: XP_007379548.1 (hypothetical protein PUNSTDRAFT_81119 [Punctularia strigosozonata HHB-11173 SS5] >EIN14631.1 hypothetical protein PUNSTDRAFT_81119 [Punctularia strigosozonata HHB-11173 SS5])

HSP 1 Score: 79.7 bits (195), Expect = 8.500e-12
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
Query:   73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEE 147
            MGGG  + +P H+W+P+GGW+A P NWK NT +  GGI    L+T++ S   E R + P+  IPS +W K  ++
Sbjct:    1 MGGGARYPYPKHVWSPAGGWWARPSNWKTNTAITAGGIAAIVLATWNISKDKEWRDVEPSKPIPSMNWTKQYKD 74          
BLAST of NO08G01350 vs. NCBI_GenBank
Match: XP_003064826.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH51160.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 79.3 bits (194), Expect = 1.100e-11
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 0
Query:   83 THIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEED 148
            + +W+P+GGWFA PK WK NT +     G AA++ FS+S  +E+RP++P   IPSQ+WC +  ED
Sbjct:   15 SRVWSPAGGWFADPKAWKRNTAIGFLAAGAAAVAIFSYSRKVEQRPLSPTRRIPSQAWCDNFPED 79          
The following BLAST results are available for this feature:
BLAST of NO08G01350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_018259750.11.700e-1249.32hypothetical protein I303_07818 [Kwoniella dejecti... [more]
OWZ59727.11.700e-1247.30hypothetical protein C356_00738 [Cryptococcus neof... [more]
XP_012046405.12.200e-1247.30hypothetical protein CNAG_00715 [Cryptococcus neof... [more]
KGB75375.12.900e-1245.95hypothetical protein CNBG_1213 [Cryptococcus gatti... [more]
PAV18230.12.900e-1249.32hypothetical protein PNOK_0671600 [Phellinus noxiu... [more]
XP_002504370.16.500e-1250.00hypothetical protein MICPUN_113359 [Micromonas com... [more]
XP_024511993.16.500e-1245.95hypothetical protein CNA06940 [Cryptococcus neofor... [more]
KIR42473.18.500e-1244.59hypothetical protein I313_01698 [Cryptococcus gatt... [more]
XP_007379548.18.500e-1243.24hypothetical protein PUNSTDRAFT_81119 [Punctularia... [more]
XP_003064826.11.100e-1147.69predicted protein [Micromonas pusilla CCMP1545] >E... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01350.1NO08G01350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582201gene_3462Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g40gene3919Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01350.1NO08G01350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01350 ID=NO08G01350|Name=NO08G01350|organism=Nannochloropsis oceanica|type=gene|length=1301bp
TGTTTGGATGTTGTTTTGTTGCTTTGTTTCTTGTGCTGTTATCAAAGTCT
AGCTTGCGAAATCGGGAAAGCCATTGTGTGGGGATCGAAGCGAAGGCGCG
CGTCACAAGAGCTGCTGTTATCTTCCGTCATATTGCTTACTGCTGCCATC
TTTGTCGCTTTCATCCACTGTGCCACACACCCGACACCTAGCCTTAACAT
GCCCACAGTCATGGTGACATATCCTCTTGGTCGTGGTAGGCATGCTGTTG
CACCAGGGCGGGCTTATCTAACCGGTGCGGCAAGCCAAAGCAGACTTCTT
ACTCGTTATGATCTCCCCGTGACTCTGCGCAATGCTCACATGAGCACCAA
GCATACCGTACACATAACCAACCAGACTCTCAACCACCCCTCCATCATAT
ACAGGGCAATAACCATGGGCGGGGGTAGGTGGTTCTACTTCCCGACGCAC
ATCTGGACGCCCTCGGGCGGGTGGTTTGCCAGCCCCAAGAACTGGAAGGC
CAATACCTTGGTAGCCCTTGGCGGCATTGGCCTGGCCGCCTTGTCCACCT
TCTCCTTCTCTGCATCCTTGGAGgtaagcagtttgaatgggatgaattga
ttggcgtgcgggggtagcgaaagcagggctgagagtgagtgcgcgcgatc
gcgtgtgagccgggcttccccgcgagggtggcgagagagaagaatgatga
ggaaatggttacggcttttttgagagaatgggatcggcgagacctatccc
ttcgtttgagtgcaagtcatggtaatacgttctcttaggacccattttgt
gatacgccgcatgcatcactgcacgtgagaagacggaggacgcaggaaga
gaggtgaaagacgatacacgtaagcacacaacataaactcaatccgcttc
gacgacccacacaaaaacacacgaccacagCGGCGACCAATTGCACCAGC
CTGGCACATTCCCTCGCAGTCATGGTGCAAACACGCGGAGGAAGATGACG
ACTCCCTTTAAGATTAAGCGACGGAGAAGAACGATATATTTCATGAAGGA
GAGCGTGGAGGGAGGATCTCGATAAGCACGCACTATGAAGCTTTTCATGA
TGGCAGAGAAGGATGTGTGCACGTTTGTGCGAGTGTGTCGTGCGTGTGAA
GAACTTAGAAATGTGTCGATGACCTGACCGATGGGAGAGTACTAAAAGAA
GCAAAACGATGACTATCGATGAACATTCGAGTTGGACGCCGCGAAGGATC
TTTAAATTGATTCCAATGAATGCATTTGCAATTTTGTGGGCCGTCCGGGG
A
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protein sequence of NO08G01350.1

>NO08G01350.1-protein ID=NO08G01350.1-protein|Name=NO08G01350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=152bp
MPTVMVTYPLGRGRHAVAPGRAYLTGAASQSRLLTRYDLPVTLRNAHMST
KHTVHITNQTLNHPSIIYRAITMGGGRWFYFPTHIWTPSGGWFASPKNWK
ANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEEDDDS
L*
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Synonyms
Publications