NO08G01040, NO08G01040 (gene) Nannochloropsis oceanica

Overview
NameNO08G01040
Unique NameNO08G01040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length732
Alignment locationchr8:331546..332277 -

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Properties
Property NameValue
DescriptionPeroxiredoxin-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:331546..332277 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0042221response to chemical
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR032802FAM213A
IPR032801FAM213/AAED1
Vocabulary: Molecular Function
TermDefinition
GO:0003674molecular_function
Homology
BLAST of NO08G01040 vs. NCBI_GenBank
Match: PRW57143.1 (hypothetical protein C2E21_3832 [Chlorella sorokiniana])

HSP 1 Score: 103.2 bits (256), Expect = 1.200e-18
Identity = 59/165 (35.76%), Postives = 89/165 (53.94%), Query Frame = 0
Query:   81 GASVPCSSLIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAE--TTSVDGFVEAFKGLDTFLDEGRMFQKFL---GDRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVVDGKGDVVYQYNEKVFGDHAPMDEVFEAA 241
            G ++P + L K    ++  +RRPGC+LCREE++ +      R +  +   RL+ V+ E     VD F   + G + + D+ + F   +         +  +L P+VWR G RA +     E + KG+G  LGGLL++   GD+ Y Y EK FGDHAPM+EV  AA
Sbjct:   15 GEAIPAADLWKDGPCLVVALRRPGCLLCREESIKVWN---ARQQFEEAGVRLVCVLHEWIDREVDAFRPEYWGGELYYDQDKAFYAAVHGGKPARASLLQLLSPTVWRAGKRAKESGLVKESNYKGDGLTLGGLLIIKKGGDIAYSYAEKTFGDHAPMEEVLAAA 176          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_014711229.1 (PREDICTED: redox-regulatory protein FAM213A isoform X1 [Equus asinus] >XP_014711230.1 PREDICTED: redox-regulatory protein FAM213A isoform X2 [Equus asinus] >XP_014711232.1 PREDICTED: redox-regulatory protein FAM213A isoform X4 [Equus asinus])

HSP 1 Score: 102.4 bits (254), Expect = 2.000e-18
Identity = 74/160 (46.25%), Postives = 93/160 (58.13%), Query Frame = 0
Query:   89 LIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAE--TTSVDGFVEAFKGLDTFLDEGRMFQKFLGD--RWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVV-DGKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            L + NGAVI  VRRPGC LCREEAMDLS  L P+L  L     L AVV E  +T V+ F   FKG + FLDE +   KF G   R + + G +   VWRN  RA        G+L+GEG  LGG+ VV  G+  ++ ++ EK FGD   +D V EAA K+
Sbjct:   65 LWEKNGAVIMAVRRPGCFLCREEAMDLSL-LKPKLDELGVP--LYAVVKEQLSTEVEDFQPYFKG-EIFLDEKK---KFYGPQRRKMMLLGFVRLGVWRNFFRAWDS--GFSGNLEGEGFILGGVFVVGSGRQGILLEHREKEFGDKVNVDSVLEAARKI 215          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_014711231.1 (PREDICTED: redox-regulatory protein FAM213A isoform X3 [Equus asinus])

HSP 1 Score: 102.4 bits (254), Expect = 2.000e-18
Identity = 74/160 (46.25%), Postives = 93/160 (58.13%), Query Frame = 0
Query:   89 LIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAE--TTSVDGFVEAFKGLDTFLDEGRMFQKFLGD--RWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVV-DGKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            L + NGAVI  VRRPGC LCREEAMDLS  L P+L  L     L AVV E  +T V+ F   FKG + FLDE +   KF G   R + + G +   VWRN  RA        G+L+GEG  LGG+ VV  G+  ++ ++ EK FGD   +D V EAA K+
Sbjct:   69 LWEKNGAVIMAVRRPGCFLCREEAMDLSL-LKPKLDELGVP--LYAVVKEQLSTEVEDFQPYFKG-EIFLDEKK---KFYGPQRRKMMLLGFVRLGVWRNFFRAWDS--GFSGNLEGEGFILGGVFVVGSGRQGILLEHREKEFGDKVNVDSVLEAARKI 219          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: PVD38523.1 (hypothetical protein C0Q70_01139 [Pomacea canaliculata])

HSP 1 Score: 102.4 bits (254), Expect = 2.000e-18
Identity = 68/157 (43.31%), Postives = 99/157 (63.06%), Query Frame = 0
Query:   89 LIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAETTSVDGFVEAFKGLDTFLDEGRMFQKFLGDRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVVDGKGD--VVYQYNEKVFGDHAPMDEVFEAASKL 244
            L + +GAVI VVRRPGC+LCREEA++LS +L   L  L+  P L AVV E+  V+ F   FKG   FLD  + F   + +R + + G+L  +VW+N  R+ K+   + G+L+GEGR LGG+ VV G  D  ++Y++ EK FGD A + ++  A  K+
Sbjct:   60 LWEASGAVIMVVRRPGCLLCREEALELS-KLKAELT-LRHVP-LYAVVHESLGVEQFSPFFKGDGIFLDAEKHFYGPV-ERRMFLSGLLRATVWKNIIRSWKR--GVNGNLEGEGRILGGMFVV-GPADQGILYEHREKEFGDMASISDIAAAVRKI 209          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_020893875.1 (redox-regulatory protein FAM213A-like isoform X1 [Exaiptasia pallida])

HSP 1 Score: 102.1 bits (253), Expect = 2.600e-18
Identity = 71/179 (39.66%), Postives = 101/179 (56.42%), Query Frame = 0
Query:   68 IPLRKVTGEAAALGASVPCSSLIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAETTSVDGFVEAFKGLDTFLDEGRMFQKFLG--DRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVVD-GKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            I ++K+ G  + L    P + L +  GA+I V+RR G  LCREEA  + T L P L  L     L+ +V E T V  F + F G + FLD  R   KF G  +R++ + G L   VW++  RA  K    EG+LKGEGR LGG+ V++ G   ++ Q+ EK FGDH  +D+V +A  K+
Sbjct:   51 IKVQKLDGSDSFL----PATDLWRKKGAIIMVIRRAGXSLCREEA-SMLTSLKPELDQLGVP--LVGIVHEKTGVKSFQKYFSG-EIFLDSER---KFYGPEERYMFISGFLRLGVWQSFFRAKNK--GFEGNLKGEGRILGGVXVMNAGDQGILLQHQEKEFGDHVELDDVRKAIQKI 216          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_020893876.1 (redox-regulatory protein FAM213A-like isoform X2 [Exaiptasia pallida])

HSP 1 Score: 102.1 bits (253), Expect = 2.600e-18
Identity = 71/179 (39.66%), Postives = 101/179 (56.42%), Query Frame = 0
Query:   68 IPLRKVTGEAAALGASVPCSSLIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAETTSVDGFVEAFKGLDTFLDEGRMFQKFLG--DRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVVD-GKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            I ++K+ G  + L    P + L +  GA+I V+RR G  LCREEA  + T L P L  L     L+ +V E T V  F + F G + FLD  R   KF G  +R++ + G L   VW++  RA  K    EG+LKGEGR LGG+ V++ G   ++ Q+ EK FGDH  +D+V +A  K+
Sbjct:   38 IKVQKLDGSDSFL----PATDLWRKKGAIIMVIRRAGXSLCREEA-SMLTSLKPELDQLGVP--LVGIVHEKTGVKSFQKYFSG-EIFLDSER---KFYGPEERYMFISGFLRLGVWQSFFRAKNK--GFEGNLKGEGRILGGVXVMNAGDQGILLQHQEKEFGDHVELDDVRKAIQKI 203          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_022786576.1 (redox-regulatory protein FAM213A-like [Stylophora pistillata])

HSP 1 Score: 100.1 bits (248), Expect = 9.800e-18
Identity = 76/192 (39.58%), Postives = 105/192 (54.69%), Query Frame = 0
Query:   55 KPSSTSSAQSLFPIPLRKVTGEAAALGASVPCSSLIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAETTSVDGFVEAFKGLDTFLDEGRMFQKFLG--DRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVV-DGKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            K S+      L  I L+ + G     G  V  S L +  GAVI VVRRPG  LCREEA++LS+ L P L   ++   L+ VV E   V  F + +     +LD+ +   KF G   RW+ + G L PSVW++  RA  K   +EG+LKGEGR LGG+ VV  G+  ++  + EK FGD A +  V +A  K+
Sbjct:   25 KNSARPDLAYLKAIKLKTLDGS----GKEVMASDLWQNGGAVIMVVRRPGXQLCREEALELSS-LKPDLN--QRGVNLVGVVHEEMGVKQF-QPYLNSTIYLDKEK---KFYGPEQRWMFLSGFLRPSVWKSLFRARGK--GIEGNLKGEGRLLGGVFVVGPGEQGILLDHKEKEFGDKADLQAVRDAVLKI 203          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: PDM62543.1 (che-11 [Pristionchus pacificus])

HSP 1 Score: 99.8 bits (247), Expect = 1.300e-17
Identity = 69/157 (43.95%), Postives = 91/157 (57.96%), Query Frame = 0
Query:   89 LIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQP--RLMAVVAETTSVDGFVEAFKGLDTFLDEGRMFQKFLGDRWLGV-QGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVVDGKGDVVYQYNEKVFGDHAPMDEVFEAASK 243
            L KP  +++  VRRPGCILCR EA  LS      LKGL  Q   RL+AV  ++  VD F   FKG D +LD  R F     +RW+ +  G L P VW + S + K+   L G+L+GEGR LGG+  VDG  D+V+ + EK +GD A ++E   A  K
Sbjct:   66 LAKP--SMVMAVRRPGCILCRREAAHLS-----ELKGLFDQAGVRLVAVTYQSKGVDEFKSYFKG-DIYLDTERTFYG-PNERWIPMWMGFLRPGVWTSVSASKKE--GLVGNLEGEGRLLGGVFFVDG-DDMVWSHMEKEWGDKADVEEARRAIQK 210          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_009979735.1 (PREDICTED: redox-regulatory protein FAM213A [Tauraco erythrolophus])

HSP 1 Score: 99.4 bits (246), Expect = 1.700e-17
Identity = 71/160 (44.38%), Postives = 90/160 (56.25%), Query Frame = 0
Query:   87 SSLIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAET--TSVDGFVEAFKGLDTFLDEGRMFQKFLGDRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVVD-GKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            S L K NGAVI  VRRPGC LCREEA +LS+ L P+L   K    L AVV E   T V+ F   FKG + FLDE + F      R + + G     VW+N  RA K      G+L+GEG  LGG+ V+  G+  V+ ++ EK FGD   +  V EAA K+
Sbjct:   67 SELWKKNGAVIMAVRRPGCFLCREEASELSS-LKPQLS--KLSVPLYAVVKEKIGTEVEDFQHYFKG-EIFLDEKKGFYG-PRRRKMMMSGFFRFGVWQNFFRAWKS--GYSGNLEGEGFTLGGVYVIGAGRQGVLLEHREKEFGDKVSLPSVLEAAEKI 219          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_009937444.1 (PREDICTED: redox-regulatory protein FAM213A [Opisthocomus hoazin])

HSP 1 Score: 97.8 bits (242), Expect = 4.900e-17
Identity = 70/158 (44.30%), Postives = 89/158 (56.33%), Query Frame = 0
Query:   89 LIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAET--TSVDGFVEAFKGLDTFLDEGRMFQKFLGDRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVV-DGKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            L K NGAV+  VRRPGC LCREEA +LS+ L P+L   K    L AVV E   T V+ F   FKG + FLDE + F      R + + G     VW+N  RA K      G+L+GEG  LGG+ V+  GK  V+ ++ EK FGD   +  V EAA K+
Sbjct:   69 LWKKNGAVVMAVRRPGCFLCREEASELSS-LKPQLS--KLGVPLYAVVKEKIGTEVEDFQHYFKG-EIFLDEKKGFYG-PRRRKMMMSGFFRLGVWQNFFRAWKS--GYSGNLEGEGFTLGGVYVIGPGKQGVLLEHREKEFGDKVSLPSVLEAAEKI 219          
The following BLAST results are available for this feature:
BLAST of NO08G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PRW57143.11.200e-1835.76hypothetical protein C2E21_3832 [Chlorella sorokin... [more]
XP_014711229.12.000e-1846.25PREDICTED: redox-regulatory protein FAM213A isofor... [more]
XP_014711231.12.000e-1846.25PREDICTED: redox-regulatory protein FAM213A isofor... [more]
PVD38523.12.000e-1843.31hypothetical protein C0Q70_01139 [Pomacea canalicu... [more]
XP_020893875.12.600e-1839.66redox-regulatory protein FAM213A-like isoform X1 [... [more]
XP_020893876.12.600e-1839.66redox-regulatory protein FAM213A-like isoform X2 [... [more]
XP_022786576.19.800e-1839.58redox-regulatory protein FAM213A-like [Stylophora ... [more]
PDM62543.11.300e-1743.95che-11 [Pristionchus pacificus][more]
XP_009979735.11.700e-1744.38PREDICTED: redox-regulatory protein FAM213A [Taura... [more]
XP_009937444.14.900e-1744.30PREDICTED: redox-regulatory protein FAM213A [Opist... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008952NSK008952Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01040.1NO08G01040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582106gene_3433Nannochloropsis oceanica (N. oceanica CCMP1779)gene
SELUgene3945Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01040.1NO08G01040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01040 ID=NO08G01040|Name=NO08G01040|organism=Nannochloropsis oceanica|type=gene|length=732bp
ATGCACTCAGATACAGGCGAACAACTTTTCATGCCGTTCCACCTCATCAC
CAAGGTCCACTTGACGCAGCTCCTGGCCGTGAGCACCATACTCTCTGGCA
CGACCTTTATCGGCGTGCGAGCCTTTGCCAAACCTGCCACCATGAGCGCA
AGCACTTCCACGAAACCTTCGTCCACATCGAGCGCCCAGAGCCTCTTCCC
CATTCCCCTCCGCAAAGTGACAGGGGAAGCTGCTGCTTTGGGCGCCAGCG
TGCCGTGCAGCAGCTTGATCAAGCCCAATGGCGCCGTCATTTTTGTGGTA
CGTCGTCCGGGATGCATCTTGTGCCGCGAAGAAGCCATGGATTTGAGCAC
CCAACTCGCCCCGCGTCTCAAGGGCCTGAAGAAGCAACCCCGGCTCATGG
CGGTGGTGGCCGAGACAACGAGCGTGGACGGTTTCGTCGAGGCGTTCAAG
GGGCTCGACACTTTTTTGGATGAGGGGCGAATGTTCCAGAAGTTCCTGGG
AGATAGGTGGTTGGGTGTGCAAGGTATGCTCTACCCATCGGTCTGGCGTA
ATGGCTCGCGGGCCACGAAGAAGTATCCGACATTGGAGGGCGATCTGAAG
GGAGAAGGGCGGCGATTGGGTGGGTTGTTGGTGGTGGATGGGAAGGGGGA
TGTGGTGTATCAGTATAATGAAAAGGTGTTCGGAGACCATGCACCAATGG
ATGAAGTGTTTGAAGCGGCGTCGAAGCTTTGA
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protein sequence of NO08G01040.1

>NO08G01040.1-protein ID=NO08G01040.1-protein|Name=NO08G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=244bp
MHSDTGEQLFMPFHLITKVHLTQLLAVSTILSGTTFIGVRAFAKPATMSA
STSTKPSSTSSAQSLFPIPLRKVTGEAAALGASVPCSSLIKPNGAVIFVV
RRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAETTSVDGFVEAFK
GLDTFLDEGRMFQKFLGDRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLK
GEGRRLGGLLVVDGKGDVVYQYNEKVFGDHAPMDEVFEAASKL*
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Synonyms
Publications