NO08G01040, NO08G01040 (gene) Nannochloropsis oceanica

Overview
NameNO08G01040
Unique NameNO08G01040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length732
Alignment locationchr8:331546..332277 -

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Properties
Property NameValue
DescriptionPeroxiredoxin-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:331546..332277 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0042221response to chemical
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR032802FAM213A
IPR032801FAM213/AAED1
Vocabulary: Molecular Function
TermDefinition
GO:0003674molecular_function
Homology
BLAST of NO08G01040 vs. NCBI_GenBank
Match: EWM26651.1 (Peroxiredoxin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 349.7 bits (896), Expect = 7.100e-93
Identity = 177/240 (73.75%), Postives = 198/240 (82.50%), Query Frame = 0
Query:   11 MPFHLITKVHLTQLLAVSTILSGTTFIGVRAFAKPATMSAST-------STKPSSTSSAQSLFPIPLRKVTGEAAALGASVPCSSLIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAETTSVDGFVEAFKGLDTFLDEGRMFQKFLGDRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVVDGKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            MP  L TK HLTQ LAV T+LSGTT +GVRAFA PA    +T                   LFPIPLRKVTGEAAALG ++   +LIKP+GAVIFVVRRPGCILCREEAMDLSTQLAPRLKG+KK+P+LMAVVAETTSVDGF+EAFKG DT+LDE R FQKFLGDRWLG++GM YPSVW+NGSRA KKYP LEGDLKGEGRRLGGL+VVDG+G+VVYQYNEKVFGDHAP++EV+ AASKL
Sbjct:    1 MPVRLFTKTHLTQFLAVGTLLSGTTLVGVRAFASPAGHPTTTRXXXXXXXXXXXXXXXXXXLFPIPLRKVTGEAAALGGAIRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAETTSVDGFLEAFKGFDTYLDEERSFQKFLGDRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVDGQGEVVYQYNEKVFGDHAPLEEVYSAASKL 240          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: CBJ25594.1 (Peroxiredoxin-like protein [Ectocarpus siliculosus])

HSP 1 Score: 127.5 bits (319), Expect = 5.700e-26
Identity = 84/204 (41.18%), Postives = 115/204 (56.37%), Query Frame = 0
Query:   45 PATMSASTSTKPSSTS-SAQSLFPIPLRKVT-----GEAAALGASVPCSSLIKPNGAVIFVVRRPGCILCREEAMDLSTQLAP-RLKGLKKQPRLMAVVAETTSVDGFVEAFKGLDTFLDEGRMFQKFLGDRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVVDGKGD--VVYQYNEKVFGDHAPMDEVFEA 240
            P  +  +TS K +S   + + +  I L+++T        A  G S+P   L K   A++FVVRRPGC LCRE A DLS +      KG+K    L+ VV E   V+ F   FK  + + DE + F   LG RW G+  ++ PSV  N  RA+ K   ++G+LKGEGR LGGLLVV G GD  + +++ E VFGDHA MD +  A
Sbjct:    7 PCFVQGNTSAKAASEPVTTEKIKDIGLQRMTVAGRDTPVATAGGSIPAGDLWKDQPAIVFVVRRPGCALCREHAQDLSNKQPDFAAKGVK----LVGVVHEKLGVEEFSGFFKNGEIYFDEEKAFFNALGMRWEGLSSLMKPSVISNAKRASAK--GVKGNLKGEGRLLGGLLVV-GSGDSGIAFEHREAVFGDHASMDAIMAA 203          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_009011667.1 (hypothetical protein HELRODRAFT_73106 [Helobdella robusta] >ESO09853.1 hypothetical protein HELRODRAFT_73106 [Helobdella robusta])

HSP 1 Score: 106.7 bits (265), Expect = 1.000e-19
Identity = 81/187 (43.32%), Postives = 107/187 (57.22%), Query Frame = 0
Query:   48 MSASTSTKPSSTSSAQSLFPIPLRKVTGEAAALGASVPCSSLIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAETTSVDGFVEAFKGLDTFLDEGRMFQKFLG--DRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVVDGKGD--VVYQYNEKVFGDH 231
            M +STS      ++ Q L  I L+K+ G     G S   S L K  GAVI VVRRPGCILCREEA +L T+L  +     K   L AVV E   V+ F   F G + FLD  R   KF G  +RW+ + G+L PSVW +  RA +K+  + G+ +GEGR LGGL V+ G GD  ++ ++ E  FG+H
Sbjct:    1 MDSSTSGS-HEKATIQYLKNINLKKIDGSDD--GGSFKASELWKDGGAVIMVVRRPGCILCREEAAEL-TKLKQKFN--DKNFSLFAVVHELMGVEEFRNFFDG-EVFLDPER---KFYGPKERWMSLAGLLRPSVWLSLIRAKRKH--VSGNTEGEGRLLGGLFVI-GPGDKGILLEHRESEFGNH 174          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_011419793.2 (PREDICTED: redox-regulatory protein FAM213A-like [Crassostrea gigas] >XP_019920448.1 PREDICTED: redox-regulatory protein FAM213A-like [Crassostrea gigas] >XP_019920451.1 PREDICTED: redox-regulatory protein FAM213A-like [Crassostrea gigas])

HSP 1 Score: 105.9 bits (263), Expect = 1.800e-19
Identity = 70/162 (43.21%), Postives = 94/162 (58.02%), Query Frame = 0
Query:   83 SVPCSSLIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAETTSVDGFVEAFKGLDTFLDEGRMFQKFLGDRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVV-DGKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            +V    L K NGAVI  VRRPG  +CREEA++LS+ L PR         L AVV ET  V+ F   FKG D FLD  ++F     +RW  V G+L  +  R+    +KK   + G+LKGEG  LGG+ V+  G+  + YQ++E  FGDHA + EV EA  ++
Sbjct:   53 TVNAKELWKDNGAVIMAVRRPGXSMCREEAINLSS-LKPRFDA--HGVTLHAVVKETLGVEDFRPYFKG-DVFLDPEKVFYG-PKERWFPVLGVLRFNFIRHVYALSKK--NIPGNLKGEGLLLGGVFVIGPGQSGIYYQHHEMEFGDHANLTEVLEAVQRI 207          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_023220306.1 (redox-regulatory protein FAM213A-like isoform X2 [Centruroides sculpturatus])

HSP 1 Score: 105.9 bits (263), Expect = 1.800e-19
Identity = 87/232 (37.50%), Postives = 124/232 (53.45%), Query Frame = 0
Query:   14 HLITKVHLTQLLAVSTILSGTTFIGVRAFAKPATMSASTSTKPSSTSSAQSLFPIPLRKVTGEAAALGASVPCSSLIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAETTSVDGFVEAFKGLDTFLDEGRMFQKFLGDRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVVDGKGD--VVYQYNEKVFGDHAPMDEVFEAASKL 244
            +++ ++     +AV+T ++G        FA    + A T   P+  ++ + L    L+K+ G      +    S L K NGAVI VVRRPGC  CREEA  +ST L P LK +     L AVV E   V  F   FKG + FLD  R+F      R L + G+L  SVW+N  R  K     +G+LKG+G  LGG+ V+ GKG+  ++Y+Y EK FGD A + E+  AA ++
Sbjct:    7 YILNEIMSRLYIAVATAVAG--------FAVYCNLPA-TWLLPAEKATLEYLSGAKLQKLDGSKQTFSS----SELWKDNGAVIMVVRRPGCFFCREEAAKIST-LHPELKDMGIP--LYAVVHEELGVKKFQPYFKG-EVFLDINRIFYGPKERRTL-LLGLLRISVWQNAYRTWKN--GYKGNLKGDGSLLGGVFVL-GKGNQGILYEYREKEFGDQANITEILSAAKEI 217          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_008542753.1 (PREDICTED: redox-regulatory protein FAM213A isoform X2 [Equus przewalskii] >XP_008542754.1 PREDICTED: redox-regulatory protein FAM213A isoform X2 [Equus przewalskii] >XP_014589374.1 redox-regulatory protein FAM213A isoform X1 [Equus caballus] >XP_023504729.1 redox-regulatory protein FAM213A isoform X1 [Equus caballus])

HSP 1 Score: 104.0 bits (258), Expect = 6.800e-19
Identity = 74/160 (46.25%), Postives = 95/160 (59.38%), Query Frame = 0
Query:   89 LIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAE--TTSVDGFVEAFKGLDTFLDEGRMFQKFLGD--RWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVV-DGKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            L + NGAVI  VRRPGC LCREEAMDLS  L P+L  L     L AVV E  +T V+ F   FKG + FLDE +   KF G   R + + G +   VWRN  RA  +   + G+L+GEG  LGG+ VV  G+  ++ ++ EK FGD   +D V EAA K+
Sbjct:   69 LWEKNGAVIMAVRRPGCFLCREEAMDLSL-LKPKLDELGVP--LYAVVKEQLSTEVEDFQPYFKG-EIFLDEKK---KFYGPQRRKMMLLGFVRLGVWRNFFRAWDR--GISGNLEGEGFILGGVFVVGSGRQGILLEHREKEFGDKVNVDSVLEAARKI 219          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_005602804.1 (redox-regulatory protein FAM213A isoform X2 [Equus caballus] >XP_005602805.1 redox-regulatory protein FAM213A isoform X3 [Equus caballus] >XP_008542755.1 PREDICTED: redox-regulatory protein FAM213A isoform X3 [Equus przewalskii] >XP_008542756.1 PREDICTED: redox-regulatory protein FAM213A isoform X4 [Equus przewalskii])

HSP 1 Score: 104.0 bits (258), Expect = 6.800e-19
Identity = 74/160 (46.25%), Postives = 95/160 (59.38%), Query Frame = 0
Query:   89 LIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAE--TTSVDGFVEAFKGLDTFLDEGRMFQKFLGD--RWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVV-DGKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            L + NGAVI  VRRPGC LCREEAMDLS  L P+L  L     L AVV E  +T V+ F   FKG + FLDE +   KF G   R + + G +   VWRN  RA  +   + G+L+GEG  LGG+ VV  G+  ++ ++ EK FGD   +D V EAA K+
Sbjct:   65 LWEKNGAVIMAVRRPGCFLCREEAMDLSL-LKPKLDELGVP--LYAVVKEQLSTEVEDFQPYFKG-EIFLDEKK---KFYGPQRRKMMLLGFVRLGVWRNFFRAWDR--GISGNLEGEGFILGGVFVVGSGRQGILLEHREKEFGDKVNVDSVLEAARKI 215          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_008542752.1 (PREDICTED: redox-regulatory protein FAM213A isoform X1 [Equus przewalskii])

HSP 1 Score: 104.0 bits (258), Expect = 6.800e-19
Identity = 74/160 (46.25%), Postives = 95/160 (59.38%), Query Frame = 0
Query:   89 LIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAE--TTSVDGFVEAFKGLDTFLDEGRMFQKFLGD--RWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVV-DGKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            L + NGAVI  VRRPGC LCREEAMDLS  L P+L  L     L AVV E  +T V+ F   FKG + FLDE +   KF G   R + + G +   VWRN  RA  +   + G+L+GEG  LGG+ VV  G+  ++ ++ EK FGD   +D V EAA K+
Sbjct:   74 LWEKNGAVIMAVRRPGCFLCREEAMDLSL-LKPKLDELGVP--LYAVVKEQLSTEVEDFQPYFKG-EIFLDEKK---KFYGPQRRKMMLLGFVRLGVWRNFFRAWDR--GISGNLEGEGFILGGVFVVGSGRQGILLEHREKEFGDKVNVDSVLEAARKI 224          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_023504737.1 (redox-regulatory protein FAM213A isoform X4 [Equus caballus])

HSP 1 Score: 104.0 bits (258), Expect = 6.800e-19
Identity = 74/160 (46.25%), Postives = 95/160 (59.38%), Query Frame = 0
Query:   89 LIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAE--TTSVDGFVEAFKGLDTFLDEGRMFQKFLGD--RWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVV-DGKGDVVYQYNEKVFGDHAPMDEVFEAASKL 244
            L + NGAVI  VRRPGC LCREEAMDLS  L P+L  L     L AVV E  +T V+ F   FKG + FLDE +   KF G   R + + G +   VWRN  RA  +   + G+L+GEG  LGG+ VV  G+  ++ ++ EK FGD   +D V EAA K+
Sbjct:   58 LWEKNGAVIMAVRRPGCFLCREEAMDLSL-LKPKLDELGVP--LYAVVKEQLSTEVEDFQPYFKG-EIFLDEKK---KFYGPQRRKMMLLGFVRLGVWRNFFRAWDR--GISGNLEGEGFILGGVFVVGSGRQGILLEHREKEFGDKVNVDSVLEAARKI 208          
BLAST of NO08G01040 vs. NCBI_GenBank
Match: XP_006811580.1 (PREDICTED: LOW QUALITY PROTEIN: redox-regulatory protein FAM213A-like [Saccoglossus kowalevskii])

HSP 1 Score: 103.2 bits (256), Expect = 1.200e-18
Identity = 68/157 (43.31%), Postives = 91/157 (57.96%), Query Frame = 0
Query:   87 SSLIKPNGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAETTSVDGFVEAFKGLDTFLDEGRMFQKFLG--DRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLKGEGRRLGGLLVVDGKGD--VVYQYNEKVFGDHAPMDEVFEA 240
            + L K +GAV+ VVRRPG  LCREEA++LS+       G    P + AVV E   VD F E F G D FLDE +   +F G   RW+   G + P++W    RA ++   + G+L+GEGR LGG+ VV G GD  +VY++    F D A  DEV +A
Sbjct:   67 AELFKESGAVVLVVRRPGXSLCREEAVELSSLRGELAIGSVHVP-IFAVVHEELGVDEFAEYFDG-DIFLDEEK---RFYGPKQRWMLWSGFMRPNMWLGLLRAYRR--QISGNLEGEGRLLGGVFVV-GPGDQGIVYEHRNADFSDQANWDEVVDA 215          
The following BLAST results are available for this feature:
BLAST of NO08G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26651.17.100e-9373.75Peroxiredoxin-like protein [Nannochloropsis gadita... [more]
CBJ25594.15.700e-2641.18Peroxiredoxin-like protein [Ectocarpus siliculosus... [more]
XP_009011667.11.000e-1943.32hypothetical protein HELRODRAFT_73106 [Helobdella ... [more]
XP_011419793.21.800e-1943.21PREDICTED: redox-regulatory protein FAM213A-like [... [more]
XP_023220306.11.800e-1937.50redox-regulatory protein FAM213A-like isoform X2 [... [more]
XP_008542753.16.800e-1946.25PREDICTED: redox-regulatory protein FAM213A isofor... [more]
XP_005602804.16.800e-1946.25redox-regulatory protein FAM213A isoform X2 [Equus... [more]
XP_008542752.16.800e-1946.25PREDICTED: redox-regulatory protein FAM213A isofor... [more]
XP_023504737.16.800e-1946.25redox-regulatory protein FAM213A isoform X4 [Equus... [more]
XP_006811580.11.200e-1843.31PREDICTED: LOW QUALITY PROTEIN: redox-regulatory p... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008952NSK008952Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01040.1NO08G01040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582106gene_3433Nannochloropsis oceanica (N. oceanica CCMP1779)gene
SELUgene3945Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01040.1NO08G01040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01040 ID=NO08G01040|Name=NO08G01040|organism=Nannochloropsis oceanica|type=gene|length=732bp
ATGCACTCAGATACAGGCGAACAACTTTTCATGCCGTTCCACCTCATCAC
CAAGGTCCACTTGACGCAGCTCCTGGCCGTGAGCACCATACTCTCTGGCA
CGACCTTTATCGGCGTGCGAGCCTTTGCCAAACCTGCCACCATGAGCGCA
AGCACTTCCACGAAACCTTCGTCCACATCGAGCGCCCAGAGCCTCTTCCC
CATTCCCCTCCGCAAAGTGACAGGGGAAGCTGCTGCTTTGGGCGCCAGCG
TGCCGTGCAGCAGCTTGATCAAGCCCAATGGCGCCGTCATTTTTGTGGTA
CGTCGTCCGGGATGCATCTTGTGCCGCGAAGAAGCCATGGATTTGAGCAC
CCAACTCGCCCCGCGTCTCAAGGGCCTGAAGAAGCAACCCCGGCTCATGG
CGGTGGTGGCCGAGACAACGAGCGTGGACGGTTTCGTCGAGGCGTTCAAG
GGGCTCGACACTTTTTTGGATGAGGGGCGAATGTTCCAGAAGTTCCTGGG
AGATAGGTGGTTGGGTGTGCAAGGTATGCTCTACCCATCGGTCTGGCGTA
ATGGCTCGCGGGCCACGAAGAAGTATCCGACATTGGAGGGCGATCTGAAG
GGAGAAGGGCGGCGATTGGGTGGGTTGTTGGTGGTGGATGGGAAGGGGGA
TGTGGTGTATCAGTATAATGAAAAGGTGTTCGGAGACCATGCACCAATGG
ATGAAGTGTTTGAAGCGGCGTCGAAGCTTTGA
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protein sequence of NO08G01040.1

>NO08G01040.1-protein ID=NO08G01040.1-protein|Name=NO08G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=244bp
MHSDTGEQLFMPFHLITKVHLTQLLAVSTILSGTTFIGVRAFAKPATMSA
STSTKPSSTSSAQSLFPIPLRKVTGEAAALGASVPCSSLIKPNGAVIFVV
RRPGCILCREEAMDLSTQLAPRLKGLKKQPRLMAVVAETTSVDGFVEAFK
GLDTFLDEGRMFQKFLGDRWLGVQGMLYPSVWRNGSRATKKYPTLEGDLK
GEGRRLGGLLVVDGKGDVVYQYNEKVFGDHAPMDEVFEAASKL*
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Synonyms
Publications