NO08G00770, NO08G00770 (gene) Nannochloropsis oceanica

Overview
NameNO08G00770
Unique NameNO08G00770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length297
Alignment locationchr8:253959..254255 -

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Properties
Property NameValue
DescriptionPhosphatidylinositol 3-kinase vps34
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:253959..254255 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0046854phosphatidylinositol phosphorylation
GO:0048015phosphatidylinositol-mediated signaling
GO:0007165signal transduction
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR015433PI_Kinase
IPR000403PI3/4_kinase_cat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Homology
[Close]
BLAST of NO08G00770 vs. NCBI_GenBank
Match: EWM26563.1 (phosphatidylinositol 3-kinase vps34 [Nannochloropsis gaditana])

HSP 1 Score: 151.4 bits (381), Expect = 1.500e-33
Identity = 69/96 (71.88%), Postives = 79/96 (82.29%), Query Frame = 0 
Query:    1 MMLCPDGRFFHLDFGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFEKFTRLCIKAFNGLRRHANVVIGVVSLMVDAGLKDLGGGEEIAGGGG 97
            +MLCPDG  FH+DFGFILGKDPKPTPLLGPFRLS SMV+GMGGKEHENF++F +LC   F  LRRHA+++I VV LMVDAGLKDLGG   +A   G
Sbjct:  351 IMLCPDGHLFHIDFGFILGKDPKPTPLLGPFRLSLSMVEGMGGKEHENFKRFKQLCTVTFQCLRRHASLIIWVVGLMVDAGLKDLGGAAHVARSSG 446
[Close]
BLAST of NO08G00770 vs. NCBI_GenBank
Match: EWM25064.1 (phosphatidylinositol 3-kinase catalytic subunit type 3 [Nannochloropsis gaditana])

HSP 1 Score: 111.7 bits (278), Expect = 1.300e-21
Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 0 
Query:    1 MMLCPDGRFFHLDFGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFEKFTRLCIKAFNGLRRHANVVIGVVSLMVDAGLKDLGG 88
            +ML P G   H+DFGFI G+DPKP P   PFRL+  MV+G+GG+ HENF KF R C +A+N  R HAN+++ ++ LMVDAG+KDL G
Sbjct:  846 IMLLPHGHLLHIDFGFIFGQDPKPMP--PPFRLAPQMVEGLGGEAHENFMKFKRYCCQAYNCFRGHANLILTLLGLMVDAGIKDLAG 930
[Close]
BLAST of NO08G00770 vs. NCBI_GenBank
Match: ODN88017.1 (phosphatidylinositol 3-kinase [Cryptococcus depauperatus CBS 7841])

HSP 1 Score: 104.8 bits (260), Expect = 1.600e-19
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    1 MMLCPDGRFFHLDFGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFEKFTRLCIKAFNGLRRHANVVIGVVSLMVDAGLKDL 86
            +ML PDG FFH+DFG+ILG+DPKP P   P ++   MVDGMGG    ++ +F  LC  AF GLR++AN+++ +++LMVDAG++D+
Sbjct:  746 LMLAPDGHFFHVDFGYILGRDPKPYP--PPVKVCKEMVDGMGGTGSSHYARFQSLCYTAFIGLRKNANLILNLIALMVDAGIQDI 828
[Close]
BLAST of NO08G00770 vs. NCBI_GenBank
Match: ODN95148.1 (phosphatidylinositol 3-kinase [Cryptococcus depauperatus CBS 7855])

HSP 1 Score: 104.8 bits (260), Expect = 1.600e-19
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    1 MMLCPDGRFFHLDFGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFEKFTRLCIKAFNGLRRHANVVIGVVSLMVDAGLKDL 86
            +ML PDG FFH+DFG+ILG+DPKP P   P ++   MVDGMGG    ++ +F  LC  AF GLR++AN+++ +++LMVDAG++D+
Sbjct:  746 LMLAPDGHFFHVDFGYILGRDPKPYP--PPVKVCKEMVDGMGGTGSSHYARFQSLCYTAFIGLRKNANLILNLIALMVDAGIQDI 828
[Close]
BLAST of NO08G00770 vs. NCBI_GenBank
Match: XP_018263846.1 (phosphatidylinositol 3-kinase [Kwoniella dejecticola CBS 10117] >OBR86004.1 phosphatidylinositol 3-kinase [Kwoniella dejecticola CBS 10117])

HSP 1 Score: 104.4 bits (259), Expect = 2.100e-19
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    1 MMLCPDGRFFHLDFGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFEKFTRLCIKAFNGLRRHANVVIGVVSLMVDAGLKDL 86
            +ML PDG FFH+DFG+ILG+DPKP P   P ++   MVD MGG +  ++ +F  LC  AF GLR++AN+++ +V+LMVDAG++D+
Sbjct:  743 LMLAPDGHFFHVDFGYILGRDPKPYP--PPVKVCKEMVDAMGGTQSSHYARFQSLCYTAFIGLRKNANLILNLVALMVDAGIQDI 825
[Close]
BLAST of NO08G00770 vs. NCBI_GenBank
Match: OCF54132.1 (phosphatidylinositol 3-kinase [Kwoniella mangroviensis CBS 10435])

HSP 1 Score: 104.4 bits (259), Expect = 2.100e-19
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    1 MMLCPDGRFFHLDFGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFEKFTRLCIKAFNGLRRHANVVIGVVSLMVDAGLKDL 86
            +ML PDG FFH+DFG+ILG+DPKP P   P ++   MVD MGG +  ++ +F  LC  AF GLR++AN+++ +V+LMVDAG++D+
Sbjct:  743 LMLAPDGHFFHVDFGYILGRDPKPYP--PPVKVCKEMVDAMGGTQSSHYARFQSLCYTAFIGLRKNANLILNLVALMVDAGIQDI 825
[Close]
BLAST of NO08G00770 vs. NCBI_GenBank
Match: XP_019042689.1 (phosphatidylinositol 3-kinase [Kwoniella bestiolae CBS 10118] >OCF21619.1 phosphatidylinositol 3-kinase [Kwoniella bestiolae CBS 10118])

HSP 1 Score: 104.0 bits (258), Expect = 2.700e-19
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    1 MMLCPDGRFFHLDFGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFEKFTRLCIKAFNGLRRHANVVIGVVSLMVDAGLKDL 86
            +ML PDG FFH+DFG+ILG+DPKP P   P ++   MVD MGG +  ++ +F  LC  AF GLR++AN+++ +V+LMVDAG++D+
Sbjct:  743 LMLAPDGHFFHVDFGYILGRDPKPYP--PPVKVCKEMVDAMGGTQSTHYARFQSLCYTAFIGLRKNANLILNLVALMVDAGIQDI 825
[Close]
BLAST of NO08G00770 vs. NCBI_GenBank
Match: XP_019013526.1 (phosphatidylinositol 3-kinase [Kwoniella pini CBS 10737] >OCF52307.1 phosphatidylinositol 3-kinase [Kwoniella pini CBS 10737])

HSP 1 Score: 104.0 bits (258), Expect = 2.700e-19
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    1 MMLCPDGRFFHLDFGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFEKFTRLCIKAFNGLRRHANVVIGVVSLMVDAGLKDL 86
            +ML PDG FFH+DFG+ILG+DPKP P   P ++   MVD MGG +  ++ +F  LC  AF GLR++AN+++ +V+LMVDAG++D+
Sbjct:  743 LMLAPDGHFFHVDFGYILGRDPKPYP--PPVKVCKEMVDAMGGTQSAHYARFQSLCYTAFIGLRKNANLILNLVALMVDAGIQDI 825
[Close]
BLAST of NO08G00770 vs. NCBI_GenBank
Match: XP_019002600.1 (phosphatidylinositol 3-kinase [Kwoniella mangroviensis CBS 8507] >OCF66061.1 phosphatidylinositol 3-kinase [Kwoniella mangroviensis CBS 8507])

HSP 1 Score: 104.0 bits (258), Expect = 2.700e-19
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    1 MMLCPDGRFFHLDFGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFEKFTRLCIKAFNGLRRHANVVIGVVSLMVDAGLKDL 86
            +ML PDG FFH+DFG+ILG+DPKP P   P ++   MVD MGG +  ++ +F  LC  AF GLR++AN+++ +V+LMVDAG++D+
Sbjct:  743 LMLAPDGHFFHVDFGYILGRDPKPYP--PPVKVCKEMVDAMGGTQSTHYARFQSLCYTAFIGLRKNANLILNLVALMVDAGIQDI 825
[Close]
BLAST of NO08G00770 vs. NCBI_GenBank
Match: OCF71864.1 (phosphatidylinositol 3-kinase [Kwoniella mangroviensis CBS 8886])

HSP 1 Score: 104.0 bits (258), Expect = 2.700e-19
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:    1 MMLCPDGRFFHLDFGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFEKFTRLCIKAFNGLRRHANVVIGVVSLMVDAGLKDL 86
            +ML PDG FFH+DFG+ILG+DPKP P   P ++   MVD MGG +  ++ +F  LC  AF GLR++AN+++ +V+LMVDAG++D+
Sbjct:  743 LMLAPDGHFFHVDFGYILGRDPKPYP--PPVKVCKEMVDAMGGTQSTHYARFQSLCYTAFIGLRKNANLILNLVALMVDAGIQDI 825
The following BLAST results are available for this feature:
BLAST of NO08G00770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26563.11.500e-3371.88phosphatidylinositol 3-kinase vps34 [Nannochlorops... [more]
EWM25064.11.300e-2156.32phosphatidylinositol 3-kinase catalytic subunit ty... [more]
ODN88017.11.600e-1951.76phosphatidylinositol 3-kinase [Cryptococcus depaup... [more]
ODN95148.11.600e-1951.76phosphatidylinositol 3-kinase [Cryptococcus depaup... [more]
XP_018263846.12.100e-1951.76phosphatidylinositol 3-kinase [Kwoniella dejectico... [more]
OCF54132.12.100e-1951.76phosphatidylinositol 3-kinase [Kwoniella mangrovie... [more]
XP_019042689.12.700e-1951.76phosphatidylinositol 3-kinase [Kwoniella bestiolae... [more]
XP_019013526.12.700e-1951.76phosphatidylinositol 3-kinase [Kwoniella pini CBS ... [more]
XP_019002600.12.700e-1951.76phosphatidylinositol 3-kinase [Kwoniella mangrovie... [more]
OCF71864.12.700e-1951.76phosphatidylinositol 3-kinase [Kwoniella mangrovie... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00770.1NO08G00770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|359608gene_3405Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00770.1NO08G00770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00770 ID=NO08G00770|Name=NO08G00770|organism=Nannochloropsis oceanica|type=gene|length=297bp
ATGATGTTGTGTCCGGATGGACGGTTCTTCCACCTGGATTTCGGATTTAT
ACTTGGCAAGGACCCGAAGCCGACTCCTCTTTTAGGGCCGTTCCGGCTGT
CCGCGTCGATGGTGGATGGTATGGGGGGGAAGGAACATGAAAATTTCGAA
AAGTTTACGCGGTTGTGCATCAAGGCATTTAATGGGCTGAGACGGCATGC
GAACGTTGTGATTGGGGTGGTTAGCTTGATGGTGGATGCGGGGTTGAAGG
ATTTGGGAGGGGGGGAGGAAATAGCGGGGGGGGGGGGGGCACAGTAG
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protein sequence of NO08G00770.1

>NO08G00770.1-protein ID=NO08G00770.1-protein|Name=NO08G00770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=99bp
MMLCPDGRFFHLDFGFILGKDPKPTPLLGPFRLSASMVDGMGGKEHENFE
KFTRLCIKAFNGLRRHANVVIGVVSLMVDAGLKDLGGGEEIAGGGGAQ*
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Synonyms
Publications