NO08G00670, NO08G00670 (gene) Nannochloropsis oceanica

Overview
NameNO08G00670
Unique NameNO08G00670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4110
Alignment locationchr8:230307..234416 +

Link to JBrowse

Properties
Property NameValue
DescriptionS-adenosylmethionine synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:230307..234416 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004478methionine adenosyltransferase activity
GO:0016740transferase activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006556S-adenosylmethionine biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR022636S-AdoMet_synthetase_sfam
IPR002133S-AdoMet_synthetase
IPR022629S-AdoMet_synt_central
IPR022628S-AdoMet_synt_N
IPR022630S-AdoMet_synt_C
Homology
BLAST of NO08G00670 vs. NCBI_GenBank
Match: XP_002896578.1 (S-adenosylmethionine synthetase 2 [Phytophthora infestans T30-4] >AAN31489.1 S-adenosyl methionine synthetase [Phytophthora infestans] >EEY67024.1 S-adenosylmethionine synthetase 2 [Phytophthora infestans T30-4])

HSP 1 Score: 626.7 bits (1615), Expect = 4.800e-176
Identity = 304/385 (78.96%), Postives = 341/385 (88.57%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            FLFTSESVNEGHPDK+CDQ+SDA+LDACV +D NSRVACETC KTGMVMIFGEIST A VNYE+VIRDTIKEIGYDDP KGLDY T+NVIVAIE+QSPDIAQSVDS T   ED+GAGDQGIMFGYA+DET ELMPL+H+LAT +G++LTEVRK G LDW+RPDGKTQVTVEYK E GR VPQRVHT+VISTQH+++VT E+I  DL++HVI+ V+P KYLDDKT+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKS+VA  L HR+LVQLSYAIGV +PLS+ VDSYGT K   G +D +L +I++KNFDLRPG IQ+ L LKRP+M KTAAYGHFGR D DFTWE VK L +
Sbjct:   11 FLFTSESVNEGHPDKLCDQISDAVLDACVSEDPNSRVACETCAKTGMVMIFGEISTKAIVNYEKVIRDTIKEIGYDDPAKGLDYKTVNVIVAIEQQSPDIAQSVDSVTD--EDVGAGDQGIMFGYASDETPELMPLSHVLATKLGSKLTEVRKNGTLDWIRPDGKTQVTVEYKQEDGRMVPQRVHTVVISTQHNDDVTNEQIAADLMKHVIQTVIPEKYLDDKTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSVVAKGLAHRLLVQLSYAIGVPYPLSIHVDSYGTVK--EGVTDDDLVEIIKKNFDLRPGMIQKTLQLKRPVMQKTAAYGHFGREDADFTWETVKELEL 391          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: XP_008902357.1 (S-adenosylmethionine synthase 2 [Phytophthora parasitica INRA-310] >ETI51646.1 S-adenosylmethionine synthase 2 [Phytophthora parasitica P1569] >ETK91572.1 S-adenosylmethionine synthase 2 [Phytophthora parasitica] >ETL44978.1 S-adenosylmethionine synthase 2 [Phytophthora parasitica] >ETL98136.1 S-adenosylmethionine synthase 2 [Phytophthora parasitica] >ETM51278.1 S-adenosylmethionine synthase 2 [Phytophthora parasitica] >ETN12381.1 S-adenosylmethionine synthase 2 [Phytophthora parasitica INRA-310] >ETO80401.1 S-adenosylmethionine synthase 2 [Phytophthora parasitica P1976] >ETP21429.1 S-adenosylmethionine synthase 2 [Phytophthora parasitica CJ01A1] >ETP49382.1 S-adenosylmethionine synthase 2 [Phytophthora parasitica P10297])

HSP 1 Score: 626.7 bits (1615), Expect = 4.800e-176
Identity = 304/385 (78.96%), Postives = 341/385 (88.57%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            FLFTSESVNEGHPDK+CDQ+SDA+LDACV +D NSRVACETC KTGMVMIFGEIST A VNYE+VIRDTIKEIGYDDP KGLDY T+NVIVAIE+QSPDIAQSVDS T   ED+GAGDQGIMFGYA+DET ELMPL+H+LAT +G++LTEVRK G LDW+RPDGKTQVTVEYK E GR VPQRVHT+VISTQH+++VT E+I  DL++HVI+ V+P KYLDDKT+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKS+VA  L HR+LVQLSYAIGV +PLS+ VDSYGT K   G +D +L +I++KNFDLRPG IQ+ L LKRP+M KTAAYGHFGR D DFTWE VK L +
Sbjct:   11 FLFTSESVNEGHPDKLCDQISDAVLDACVSEDPNSRVACETCAKTGMVMIFGEISTKAIVNYEKVIRDTIKEIGYDDPAKGLDYKTVNVIVAIEQQSPDIAQSVDSVTD--EDVGAGDQGIMFGYASDETPELMPLSHVLATKLGSKLTEVRKNGTLDWIRPDGKTQVTVEYKQEDGRMVPQRVHTVVISTQHNDDVTNEQIAADLMKHVIQTVIPEKYLDDKTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSVVAKGLAHRLLVQLSYAIGVPYPLSIHVDSYGTVK--EGLTDDDLVEIIKKNFDLRPGMIQKTLQLKRPVMQKTAAYGHFGREDADFTWETVKELEL 391          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: XP_009526921.1 (hypothetical protein PHYSODRAFT_285996 [Phytophthora sojae] >EGZ17863.1 hypothetical protein PHYSODRAFT_285996 [Phytophthora sojae])

HSP 1 Score: 626.3 bits (1614), Expect = 6.300e-176
Identity = 303/385 (78.70%), Postives = 342/385 (88.83%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            FLFTSESVNEGHPDK+CDQ+SDA+LDACV +D NSRVACETC KTGMVMIFGEI+T A VNYE+VIRDTIKEIGYDDP KGLDY T+NVIVAIE+QSPDIAQSVDS T   ED+GAGDQGIMFGYA+DET ELMPL+H+LAT +G++LTEVRK G LDW+RPDGKTQVTVEYK E GR +PQRVHT+VISTQH+++VT E+I  DL++HVI+ V+P KYLDDKT+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKS+VA  L HR+LVQLSYAIGV +PLS+ VDSYGT K   G SD +L +I++KNFDLRPG IQ+ L+LKRP+M KTAAYGHFGR D DFTWE VK L +
Sbjct:   12 FLFTSESVNEGHPDKLCDQISDAVLDACVSEDPNSRVACETCAKTGMVMIFGEITTKAIVNYEKVIRDTIKEIGYDDPAKGLDYKTVNVIVAIEQQSPDIAQSVDSVTD--EDVGAGDQGIMFGYASDETPELMPLSHVLATKLGSKLTEVRKNGTLDWIRPDGKTQVTVEYKQEEGRMIPQRVHTVVISTQHNDDVTNEQIAADLMKHVIQTVIPEKYLDDKTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSVVAKGLAHRLLVQLSYAIGVPYPLSIHVDSYGTVK--EGLSDDDLVEIIKKNFDLRPGMIQKTLSLKRPVMQKTAAYGHFGREDADFTWETVKELEL 392          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: XP_024577274.1 (s-adenosylmethionine synthase 2 [Plasmopara halstedii] >CEG40905.1 s-adenosylmethionine synthase 2 [Plasmopara halstedii])

HSP 1 Score: 625.5 bits (1612), Expect = 1.100e-175
Identity = 304/392 (77.55%), Postives = 344/392 (87.76%), Query Frame = 0
Query:    2 SLEDGTEFLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            S +D T FLFTSESVNEGHPDK+CDQ+SDA+LDACV +D NSRVACETC KTGMVMIFGEI+T A VNYE+VIRDTIKEIGYDDP KGLDY T+NVIVAIE+QSPDIAQSVDS T   ED+GAGDQGIMFGYA+DET E MPL+H+LAT +G++LT+VRK G LDW+RPDGKTQVTVEYK E GR VPQRVHT+VISTQH++EVT E+I  DL++HV++ V+P KYLDDKT+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLV+  L HRV+VQLSYAIGV +PLS+ VDSYGT K   G +D +L +I++KNFDLRPG IQ+ L LKRP+M KTAAYGHFGR D DFTWE VK L +
Sbjct:    6 STKDRT-FLFTSESVNEGHPDKLCDQISDAVLDACVSEDPNSRVACETCAKTGMVMIFGEITTKAIVNYEKVIRDTIKEIGYDDPAKGLDYKTVNVIVAIEQQSPDIAQSVDSVT--EEDVGAGDQGIMFGYASDETPEYMPLSHILATKLGSKLTDVRKNGTLDWIRPDGKTQVTVEYKQENGRMVPQRVHTVVISTQHNDEVTNEQIHADLMKHVVQTVIPEKYLDDKTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVSQGLAHRVIVQLSYAIGVPYPLSIHVDSYGTVK--EGLTDDDLVEIIKKNFDLRPGMIQKSLQLKRPVMQKTAAYGHFGREDADFTWETVKELEV 392          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: GAX96479.1 (S-adenosylmethionine synthase 2 [Pythium insidiosum])

HSP 1 Score: 623.6 bits (1607), Expect = 4.100e-175
Identity = 305/386 (79.02%), Postives = 339/386 (87.82%), Query Frame = 0
Query:    6 GTEFLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTL 392
            G  FLFTSESVNEGHPDK+CDQ+SDA+LDAC+ +D NSRVACETC KTGMVMIFGEI+T A V YE+VIRDTIK+IGYDDP KGLD+ T+NVIVAIEEQSPDIAQSVDS T   ED+GAGDQGIMFGYATDET ELMPL+H+LAT +G+RLTEVRK G L W+RPDGKTQVTVEYK E GR +PQRVHT+VISTQHSEEVT E+I  DL++HVI+ V+P KYLDD+T+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVA  L  RVLVQLSYAIGV +PLS+ +DSYGT K  +G  D +L +IV+KNFDLRPG IQRDL LKRP+M KTAAYGHFGR D DFTWE VK +
Sbjct:   10 GRTFLFTSESVNEGHPDKLCDQISDAVLDACIAEDPNSRVACETCAKTGMVMIFGEITTKAHVQYEKVIRDTIKQIGYDDPAKGLDFKTVNVIVAIEEQSPDIAQSVDSVTD--EDVGAGDQGIMFGYATDETPELMPLSHVLATKLGSRLTEVRKNGTLGWIRPDGKTQVTVEYKEEEGRMIPQRVHTVVISTQHSEEVTNEQIAADLMKHVIQAVIPEKYLDDQTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAKGLAARVLVQLSYAIGVPYPLSIHIDSYGTVK--NGLKDGDLVEIVKKNFDLRPGVIQRDLKLKRPVMQKTAAYGHFGREDEDFTWETVKDI 391          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: CCA17988.1 (unnamed protein product [Albugo laibachii Nc14])

HSP 1 Score: 621.3 bits (1601), Expect = 2.000e-174
Identity = 303/388 (78.09%), Postives = 340/388 (87.63%), Query Frame = 0
Query:    6 GTEFLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            G  FLFTSESVNEGHPDK+CDQ+SDAILDAC+ +D NSRVACETC KTGM+MIFGEIST A VNYE++IRDT+KEIGYDDP KGLDY T+NVIVA+E+QSPDIAQSVD+ T   E+IGAGDQGIMFGYAT+ETEE MPL+H+LAT +G+RLTEVRK G LDW+ PDGKTQVTVEYK   G  +PQRVHT+VISTQH+E+VT E+I  DL++HVI+ V+  KYLDD+TIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKS+VA  L  RVLVQ SYAIGV HPLSV VDSYGT K  SG +D++L +I++KNFDLRPG IQRDL LKRPIM KTA YGHFGRND DFTWE VK L+I
Sbjct:   12 GRTFLFTSESVNEGHPDKLCDQISDAILDACITEDPNSRVACETCAKTGMIMIFGEISTKAVVNYEKIIRDTVKEIGYDDPAKGLDYKTVNVIVAVEQQSPDIAQSVDAVT--EEEIGAGDQGIMFGYATNETEEFMPLSHVLATKLGSRLTEVRKNGTLDWILPDGKTQVTVEYKEVNGCMIPQRVHTVVISTQHTEDVTNEQIAADLMKHVIQAVISEKYLDDQTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSVVAQGLAERVLVQFSYAIGVPHPLSVHVDSYGTVK--SGLTDADLVEIIKKNFDLRPGVIQRDLKLKRPIMLKTATYGHFGRNDADFTWETVKELSI 395          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: BAH30212.1 (methionine S-adenosyl transferase [Achnanthes kuwaitensis])

HSP 1 Score: 620.9 bits (1600), Expect = 2.700e-174
Identity = 304/385 (78.96%), Postives = 335/385 (87.01%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            FLFTSESVNEGHPDK+ DQVSDA+L AC+  D +SRVACETC KTGMVMIFGEI+T+ATVNYEQVIRD IK+IGYDDP KGLDY T NVIVAIEEQSPDIAQSVD+    +ED+GAGDQGIMFGYATDETE LMPLTH+LAT +G+++TEVRK GV  WVRPD KTQVT EYK+EGG PVPQRVHT+VIS QHSEEVT E+I  DL+EHVIK VVP KYLDDKT+YHLNP GRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLV A  C R LVQLSYAIGV+HPLSVFVD+YGT K   G ++ +L +I+ KNFDLRPG I RDL+L+RP+M KTAAYGHFGR DPDFTWE  K L +
Sbjct:    6 FLFTSESVNEGHPDKLSDQVSDAVLGACIAGDASSRVACETCCKTGMVMIFGEITTSATVNYEQVIRDAIKDIGYDDPAKGLDYKTCNVIVAIEEQSPDIAQSVDAT--KMEDLGAGDQGIMFGYATDETESLMPLTHMLATQLGSKITEVRKNGVCSWVRPDAKTQVTCEYKMEGGVPVPQRVHTVVISCQHSEEVTNEQIAADLMEHVIKVVVPEKYLDDKTVYHLNPPGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVTAGFCRRCLVQLSYAIGVSHPLSVFVDTYGTIK--EGMTEEQLVEIINKNFDLRPGGIIRDLDLRRPVMRKTAAYGHFGREDPDFTWEVPKKLEV 386          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: OWZ21931.1 (S-adenosylmethionine synthase 2 [Phytophthora megakarya])

HSP 1 Score: 620.5 bits (1599), Expect = 3.500e-174
Identity = 303/386 (78.50%), Postives = 341/386 (88.34%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIK-PVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            FLFTSESVNEGHPDK+CDQ+SDA+LDACV +D NSRVACETC KTGMVMIFGEIST A VNYE+VIRDTIKEIGYDDP KGLDY T+NVIVAIE+QSPDIAQSVDS T   ED+GAGDQGIMFGYA+DET ELMPL+H+LAT +G++LTEVRK G LDW+RPDGKTQVTVEYK E GR VPQRVHT+VISTQH+++VT E+I  DL++HVI+  V+P KYLDDKT+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKS+V+  L HR+LVQLSYAIGV +PLS+ VDSYGT K   G +D +L +I++KNFDLRPG IQ+ L LKRP+M KTAAYGHFGR D DFTWE VK L +
Sbjct:   12 FLFTSESVNEGHPDKLCDQISDAVLDACVSEDPNSRVACETCAKTGMVMIFGEISTKAIVNYEKVIRDTIKEIGYDDPAKGLDYKTVNVIVAIEQQSPDIAQSVDSVTD--EDVGAGDQGIMFGYASDETPELMPLSHVLATKLGSKLTEVRKDGTLDWIRPDGKTQVTVEYKQEDGRMVPQRVHTVVISTQHNDDVTNEQIAADLMKHVIQTTVIPEKYLDDKTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSVVSKGLAHRLLVQLSYAIGVPYPLSIHVDSYGTVK--EGLTDDDLVEIIKKNFDLRPGMIQKTLQLKRPVMQKTAAYGHFGREDADFTWETVKELEL 393          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: OQR92228.1 (S-adenosylmethionine synthetase 2 [Achlya hypogyna])

HSP 1 Score: 617.8 bits (1592), Expect = 2.300e-173
Identity = 298/385 (77.40%), Postives = 334/385 (86.75%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            FLFTSESVNEGHPDK+CDQ+SDA+LDACV  D NSRVACETC KTGMVMIFGEI+T AT+NYE VIR+ IK+IGYDDP KGLDY T NVIVAIE+QSP+I  +VD      EDIGAGDQGIMFGYATDET ELMPLTH+LAT +GARLTEVRK G LDWVRPDGKTQVT+EYK E GR +PQRVHT+VISTQHS EV+ E+I  DL+ HVI PV+P ++LDDKT+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD+TKVDRSAAYAARWVAK+LV   LC RV+VQLSYAIGV++PLS+ +DSYGT K   G +D +L +IV KNFDLRPGCIQRDL LKRP+M KTAAYGHFGR+  DFTWE +K LN+
Sbjct:    7 FLFTSESVNEGHPDKLCDQISDAVLDACVAQDPNSRVACETCAKTGMVMIFGEITTRATINYEAVIREAIKQIGYDDPAKGLDYKTCNVIVAIEQQSPEIGAAVDG--AKDEDIGAGDQGIMFGYATDETPELMPLTHVLATQLGARLTEVRKNGTLDWVRPDGKTQVTIEYKQENGRMIPQRVHTVVISTQHSPEVSNEQIAADLMTHVITPVIPEQFLDDKTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDSTKVDRSAAYAARWVAKNLVHHGLCKRVIVQLSYAIGVSYPLSIHIDSYGTVK--EGVTDDDLVEIVNKNFDLRPGCIQRDLKLKRPVMQKTAAYGHFGRDHEDFTWETIKELNL 387          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: CCI40834.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 615.9 bits (1587), Expect = 8.600e-173
Identity = 299/383 (78.07%), Postives = 336/383 (87.73%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTL 392
            FLFTSESVNEGHPDK+CDQ+SDAILDAC+ +D NSRVACETC KTGM+MIFGEIST A VNYE++IRDT+KEIGYDDP KGLDY T+NVIVA+E+QSPDIAQSVD+ T   E+IGAGDQGIMFGYAT+ET+E MPL+H+LAT +G+RLTEVRK G LDW+ PDGKTQVTVEYK   G  +PQRVHT+VISTQH+E+VT E+I  DL++HVI+ V+P KYLDD TIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKS+VA  L  R+LVQ SYAIGV HPLSV VDSYGT K  SG +D++L  +++KNFDLRPG IQRDL LKRPIM KTA YGHFGRND DFTWE VK L
Sbjct:   15 FLFTSESVNEGHPDKLCDQISDAILDACIMEDPNSRVACETCAKTGMIMIFGEISTKAVVNYEKIIRDTVKEIGYDDPAKGLDYKTVNVIVAVEQQSPDIAQSVDAVT--EEEIGAGDQGIMFGYATNETDEFMPLSHVLATKLGSRLTEVRKNGTLDWILPDGKTQVTVEYKELNGCMIPQRVHTVVISTQHTEDVTNEQIAADLMKHVIQAVIPEKYLDDHTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSVVAQGLAQRLLVQFSYAIGVPHPLSVHVDSYGTVK--SGLTDADLIDVIKKNFDLRPGVIQRDLKLKRPIMLKTATYGHFGRNDADFTWETVKEL 393          
The following BLAST results are available for this feature:
BLAST of NO08G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002896578.14.800e-17678.96S-adenosylmethionine synthetase 2 [Phytophthora in... [more]
XP_008902357.14.800e-17678.96S-adenosylmethionine synthase 2 [Phytophthora para... [more]
XP_009526921.16.300e-17678.70hypothetical protein PHYSODRAFT_285996 [Phytophtho... [more]
XP_024577274.11.100e-17577.55s-adenosylmethionine synthase 2 [Plasmopara halste... [more]
GAX96479.14.100e-17579.02S-adenosylmethionine synthase 2 [Pythium insidiosu... [more]
CCA17988.12.000e-17478.09unnamed protein product [Albugo laibachii Nc14][more]
BAH30212.12.700e-17478.96methionine S-adenosyl transferase [Achnanthes kuwa... [more]
OWZ21931.13.500e-17478.50S-adenosylmethionine synthase 2 [Phytophthora mega... [more]
OQR92228.12.300e-17377.40S-adenosylmethionine synthetase 2 [Achlya hypogyna... [more]
CCI40834.18.600e-17378.07unnamed protein product [Albugo candida][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008996NSK008996Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00670.1NO08G00670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|359190gene_3397Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100084g4gene3977Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00670.1NO08G00670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00670 ID=NO08G00670|Name=NO08G00670|organism=Nannochloropsis oceanica|type=gene|length=4110bp
CTTCACATTGAGACGTTGCTGCCCCACTTTTGGCCCAATACGGTCAATCC
GCAGACGATTCGCGCAAGAACCAACAACTGCGCTAAGGAGTCCCCTCGTC
ATAACCCTTGCGACCCCTCTGCACCACGTGTGGTTGGCTTACCGCGGAAA
GTCTAGTGGCGTGCCTCATCTTTTTCTTGCTTGTTGCGTTTCATTGTTTT
TAAAGTGCAAAAGCATCATGATCTAGCTCGTCGAACTGAGGAAGAAGCAG
TCGGTGGGGAGCGTGTGGCTCTCATCCTCTCGTGTCGCTGGCTTGGGGGA
AAAGGAAGAAGCGTCCAAAGCGGACGCAGAGGCTTGGCTTTGCTTGCTTG
GCTGCTGTATGACGACTTTTCATTGCGATTGTTCTGCGTTCCCTGCGACG
GGGGCCATGGAAGCCTGAAATGTGACATTCGCCCCTTGTCCGTGCCTTGA
TCTTGTGTAGAATTCCTGCGGTGCCCCCTCACCACACTGCGCTCGCCTAA
TTTTAGTATTCCAGCACTCACCCACCCACTCACCCCCGCTCACCTTCGCC
CCGCGCAGACCCACCTCCACCCCACCACTGACCACCATGTCTCTGGAAGA
TGGCACCGAGTTCCTCTTCACTTCTGAATCCGTAAACGAAGGCCACCCCG
gtacgtagcacgggtggtagaaagatgtgttgctagattccttccttctg
cgcttgtctgttctgtctgtggtcgtcatggcttgcacatcatgaccacg
tcctgcgcgtcgcatctcccccagtttgatgctcatgctctttccctatt
tcagACAAAATCTGCGATCAGGTTTCTGATGCCATCTTGGATGCCTGCGT
CAAGGACGATGAGAACTCGCGCGTCGCCTGCGgtacgtttgcaggctggg
agggcggggaggaaaaaagggaggcgcttggcaagatccttgcatccgca
tccttgcatccgcagatgcgtcctcgtgcttgtgaaagtgaagatgtcgt
taaacacgtcactgcgtcgcactgacataatcttctccccctatcgttgc
tacccacctctccccgcagAGACCTGCACCAAGACCGGCATGGTCATGAT
CTTCGGTGAGATCTCCACTGCTGCCACCGTCAACTACGAGCAGgtatgca
ctctgcgttgtacattccttcctttcctccttccttgccctccttcttcc
cctcctcccttcgtccttccagttctttcctccctttccaattctgtgac
cgacccgtggccgtcaccttccaatcgattgacctttttattgccttctc
tctcatcttctctgcctttcacctcacttcacccggacaatcaacttata
ctttgccacacgctcatcccttcgtccatcgctccttccgtccctctttc
cctcccccgcctttccagGTGATCCGTGACACGATCAAGGAGATCGGGTA
CGACGACCCCGGGAAGGGCCTGGACTACAACACCATGAATGTGATCGTGG
CCATCGAAGAGCAATCCCCCGATATCGCCCAGTCGGTCGACTCCCGCACG
GGCAACGTGGAGGACATCGGCGCCGGCGACCAGGGAATCATGTTCGGgtg
ggtaaaagagggaggaaagggaagaaggggagaaagggtaataagtgaca
cgaatgtacttttaatccatcattattgttttgtctcctcacactatgtt
ctaaagcgcggtgttcaactgatcttttctccctccctccctccctccct
ccctccctagCTATGCCACGGACGAGACGGAGGAGCTCATGCCTCTCACC
CACCTGCTGGCCACCTCCATCGGGGCCCGTCTGACAGAGGTGCGCAAGAC
AGGCGTGCTTGATTGGGTGCGCCCCGACGGCAAGACGCAAGTCACCGTTG
AGgtaggtggggagggagggagggagggagggagggaagggagggagagg
gaaggaggtatggatgtggggtgggggaaggaggtagaggagatggcaag
gaggcaagaaacgaggcgacatatgatacggtcgactcacctttctccct
ccctctctccctcccttcctcagTACAAGGTGGAGGGCGGGAGGCCCGTG
CCTCAACGGGTCCACACGATCGTTATCTCGACGCAGCACTCGGAGGAGGT
GACGCTGGAGAAGATCCGCGAGGATTTGCTCGAGCACGTGATCAAGCCGG
TGGTGCCTGCCAAGTACCTGGACGACAAGACCATCTACCACCTGAACCCC
TCGGGGCGTTTCGTGATCGGTGGCCCACACGGGGACGCCGGCTTAACGGG
CAGGAAGATCATCATCGACACGTATGGCGGGTGGGGCGCCCATGGTGGCG
GTGCCTTCTCGGGCAAGGACACGACCAAAGTGGATCGCTCGGCGGCGTAC
GCGGCCCGTTGGGTGGCCAAGAGCCTCGTGGCGGCCAAACTGTGCCATCG
GGTGCTCGTGCAGTTGTCCTATGCCATTGGCGTGGCTCACCCCCTGTCGG
TGTTTGTCGATTCGTACGGCACGGGCAAGACGGCCTCAGGAAAGTCGGAC
TCGGAGCTGTGCAAAATCGTCGAGAAGAATTTCGACCTCCGCCCCGGgta
tgtgccctctttgcttttgtggccctgccctctccttcccttccctctcc
ttccctccctccctccctccctccctcccgcctcccgcgtgacgtgcacc
tggaaccctattatgagcaaaaccactgcgacattccactcatcctactc
tcctccctcttccccacagCTGCATCCAGCGCGACCTGAACCTGAAGCGC
CCCATCATGACCAAGACGGCGGCTTACGGACACTTCGGCCGAAACGACCC
GGATTTCACTTGGGAGCAGGTGAAGACTCTCAACATTTAAATTTGAGAGG
GCGGGAGGGAAGGAGGGACGGAAGGAGGGAGGGGTAGAGTGAGGGATGAT
GGGGTGGGTCTGAGTCACGTTTCCATCCTCGGGGTTCTTTCGAGGAAAGA
AGGGAGGGAGGGAAGGAGGGATGGATGGACAGAGGGAGGGATTGAGGATG
TCACTCTGGCAATTGTTTTTGCCTTGTTCGGCATGGTGGAATCAAGTAAT
AAGCGATTGGGAGTCGGTTTTCGTCGTGGTAGACGAGGGAGGGAGAGAGG
GAGGGAGGGACGAGGGGCCCCGTGTCGCATTCGTCGTTCGGAGTTTGAAG
GAGGGGGAGGGAGGGGCGGAGGGAGAGAAGGAGGAATAGATTAATGGAGA
CCTGCATGTGTCGAGTCTGCATATGTGTGTGTGCGTGTCCAGGTGGTGGT
GGTTGTGGTGTTTTTGGTGAGGAGAACGAGAAGCAGCTGGAGGAGGAGGA
GGAGTAGCAGCACCTTCATGTCGGTTTCGGAAAGTCCCTTGTTTTCCCTT
GGAATCCTCGCACCATAACCCTGCCACCAGCATCATCATCATCATCATAG
TATCAACCTAATCACTGTCGTCACCGCCGTCTTTGTCTTGTCCTTACTGA
TGCAGCCGTTGACCGCAATGGTGGTTTGATTGAGTCAATTTAATGTCATT
TTGGATCGTGATCCATGACTTGCAGATGCCGTCATCGACCTTGTCATGAA
TCAAACAGCAGCAGTAGGCACAGGAGCAGTGGCAGCAGCAGCAGCAGCGA
GGGGTATGAAGTATTGAGACAATGCGACCCGAAAAGAATTAATGACAGCT
GGCCCTTCAAGAGGCACGTACACAGATACATAAATATACACACGTATGTT
TATACACACACTCGTGCCTTCATACGTCCGTATAGACAAGCAACATCCAT
CTCTTAACGCTCTTTGACTGCTCTTTCGTCTTCGGGGACGACTATCCCCA
CCTTCGAGTGTGAGATGTCTTCAATTCTTTCTTGATATCGGGGTCTCTAA
TTACCCCTGGCCATGCCCCTCCTTCTCTCACCCACACCAGGTATGTCACA
CGTGCCGTTGTTTACGTATGTTGCAGCTTATTCTTTGATTCCCTCTGCCT
TCATACACCTCCGTTCTCCCTCCATGTAATGTTCCCCTTTTCTGTCTTTC
CGCCAAGCAAGCACGCAATTGCCTTCCCTTCCCCCCTCCCTCCCTCCCTC
CCTCCACCCC
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protein sequence of NO08G00670.1

>NO08G00670.1-protein ID=NO08G00670.1-protein|Name=NO08G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp
MSLEDGTEFLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETC
TKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVA
IEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLAT
SIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQ
HSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGD
AGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAA
KLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFD
LRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI*
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Synonyms
Publications