NO08G00590, NO08G00590 (gene) Nannochloropsis oceanica

Overview
NameNO08G00590
Unique NameNO08G00590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3306
Alignment locationchr8:212924..216229 +

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Properties
Property NameValue
DescriptionAtp-dependent metalloprotease
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:212924..216229 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO08G00590 vs. NCBI_GenBank
Match: EWM26544.1 (atp-dependent metalloprotease [Nannochloropsis gaditana])

HSP 1 Score: 788.1 bits (2034), Expect = 1.900e-224
Identity = 398/449 (88.64%), Postives = 422/449 (93.99%), Query Frame = 0
Query:  161 RPQVFIKKLQAIVGRFRMFIRSKLMLKVNGRPILKITGWHASFAMVLAFVLLSSVFGGAAGGGAKKAPVEIPYSDFMKLVKDHGPEVVSRLRIAPDRFDFLVNGVSSFTRPVKAHPALLFFLDKYNIPFYAGAASSKSLVVFLMLNLLPFAWIFLSMGMGRRMYGDMTGTVGKDAEGSNIDRSLTFDDVAGIDRAKREVQELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFIYSAGSEFVEMFVGRGAARIRALFQRARKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNKSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREDILRVHTRKTPLGSDVDLAKTAQLTPGMSGADLAGLVNEAAIRAVRRSSSMVTQIDFDLAVKDFFRSRGTEAEKSWKRLVGNVMG 610
            RPQ+FIKKLQA +GRFR FIRSK+MLKVNGRPILK+TGWHASFA++LAFVLLSSV  G+   G   +P E+PYSDF+KLVK+HGP+VVSRLRIAPDRFDFL+NG  SFTRPVKAHPALLFFLDKYNIPFYAG+ SSKSLV FL+LNLLPFAWIFLSMGMGRRMYGDM G+VGK+AE +NIDRSLTFDDVAGIDRAKREV+ELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPF+YSAGSEFVEMFVGRGAARIR LFQ+A+KQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSN+SGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGRE ILRVHTRKTPL  D DL K AQLTPGMSGADLAGLVNEAAIRAVRRSS MV Q+D DLAVKDFFRSRGTEAEKSWKRLVGNVMG
Sbjct:  131 RPQIFIKKLQAFMGRFRTFIRSKMMLKVNGRPILKVTGWHASFALMLAFVLLSSVMRGSGRAGRGVSPAEVPYSDFLKLVKEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPVKAHPALLFFLDKYNIPFYAGSPSSKSLVAFLLLNLLPFAWIFLSMGMGRRMYGDMAGSVGKNAEENNIDRSLTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRSSPMVGQVDLDLAVKDFFRSRGTEAEKSWKRLVGNVMG 579          
BLAST of NO08G00590 vs. NCBI_GenBank
Match: XP_005760889.1 (ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516] >EOD08460.1 ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516])

HSP 1 Score: 366.7 bits (940), Expect = 1.400e-97
Identity = 203/391 (51.92%), Postives = 254/391 (64.96%), Query Frame = 0
Query:  229 VEIPYSDFMKLVKDHGPEVVSRLRIAPDRFDFLVNGVSSFTRPVKAHPALLFFLDKYNIPFYAGAASSKSLVVFLMLNLLPFAWIFLSMGMGRRMYGDMTGTVGKDAEGSNIDR-SLTFDDVAGIDRAKREVQELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFIYSAGSEFVEMFVGRGAARIRALFQRARKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNKSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREDILRVHTRKTPLGSDVDLAKTAQLTPGMSGADLAGLVNEAAIRAVRR--------------------------SSSMVTQIDFDLAVKDFFRSR 593
            VE+ Y+ FM+L        +S LR++  R+ FL++G  +FTRPV+A   L++FL K+ + F A  AS+   ++ L   L P  W+     M RR  G   G V K A    +    L+F+DVAGID AK EV+E+V MLKSP  Y   GARLP G+L+ GPPGTGKTLLAR +A++AGVPF Y +GS+FVE+FVGRGAAR+RALF+ A   +PCI+F+DELD LGKQRS+RL GSNDEVEQTLNQ+LACMDGL      ++VI ATNRY+ILD ALTRPGR DR+VR+ELPD +GR + LRVHT+   L  DV L K A  TP  SGA+LA L NEAAIR+VRR                          +   VT  DFD A+ DF  SR
Sbjct:  130 VEVSYAAFMQLAARESGR-ISGLRLSLSRYGFLLDGAPAFTRPVRAPSDLVWFLHKHGVDFRAAPASAAGALLPL---LFPLLWLGALYSMMRRQMGGQ-GNVSKRASAQLLAADGLSFEDVAGIDAAKEEVREVVAMLKSPATYAAAGARLPSGVLMCGPPGTGKTLLARVMAAQAGVPFFYCSGSDFVELFVGRGAARMRALFKEAAAVSPCIVFVDELDALGKQRSMRLAGSNDEVEQTLNQMLACMDGLGGESRDIVVIGATNRYDILDPALTRPGRFDRLVRIELPDEAGRLNTLRVHTKSLALAPDVSLRKVAAATPTFSGAELAALTNEAAIRSVRRAVASIAXXXXXXXXXXXXXXXPAHSGAGGPVTMADFDSALVDFVTSR 515          
BLAST of NO08G00590 vs. NCBI_GenBank
Match: XP_005773256.1 (ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516] >EOD20827.1 ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516])

HSP 1 Score: 366.7 bits (940), Expect = 1.400e-97
Identity = 203/391 (51.92%), Postives = 254/391 (64.96%), Query Frame = 0
Query:  229 VEIPYSDFMKLVKDHGPEVVSRLRIAPDRFDFLVNGVSSFTRPVKAHPALLFFLDKYNIPFYAGAASSKSLVVFLMLNLLPFAWIFLSMGMGRRMYGDMTGTVGKDAEGSNIDR-SLTFDDVAGIDRAKREVQELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFIYSAGSEFVEMFVGRGAARIRALFQRARKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNKSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREDILRVHTRKTPLGSDVDLAKTAQLTPGMSGADLAGLVNEAAIRAVRR--------------------------SSSMVTQIDFDLAVKDFFRSR 593
            VE+ Y+ FM+L        +S LR++  R+ FL++G  +FTRPV+A   L++FL K+ + F A  AS+   ++ L   L P  W+     M RR  G   G V K A    +    L+F+DVAGID AK EV+E+V MLKSP  Y   GARLP G+L+ GPPGTGKTLLAR +A++AGVPF Y +GS+FVE+FVGRGAAR+RALF+ A   +PCI+F+DELD LGKQRS+RL GSNDEVEQTLNQ+LACMDGL      ++VI ATNRY+ILD ALTRPGR DR+VR+ELPD +GR + LRVHT+   L  DV L K A  TP  SGA+LA L NEAAIR+VRR                          +   VT  DFD A+ DF  SR
Sbjct:  127 VEVSYAAFMQLAARESGR-ISGLRLSLSRYGFLLDGAPAFTRPVRAPSDLVWFLHKHGVDFRAAPASAAGALLPL---LFPLLWLGALYSMMRRQMGGQ-GNVSKRASAQLLAADGLSFEDVAGIDAAKEEVREVVAMLKSPATYAAAGARLPSGVLMCGPPGTGKTLLARVMAAQAGVPFFYCSGSDFVELFVGRGAARMRALFKEAAAVSPCIVFVDELDALGKQRSMRLAGSNDEVEQTLNQMLACMDGLGGESRDIVVIGATNRYDILDPALTRPGRFDRLVRIELPDEAGRLNTLRVHTKSLALAPDVSLRKVAAATPTFSGAELAALTNEAAIRSVRRAVASIAXXXXXXXXXXXXXXXPAHSGAGGPVTMADFDSALVDFVTSR 512          
BLAST of NO08G00590 vs. NCBI_GenBank
Match: XP_005774095.1 (ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516] >EOD21666.1 ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516])

HSP 1 Score: 366.7 bits (940), Expect = 1.400e-97
Identity = 203/391 (51.92%), Postives = 254/391 (64.96%), Query Frame = 0
Query:  229 VEIPYSDFMKLVKDHGPEVVSRLRIAPDRFDFLVNGVSSFTRPVKAHPALLFFLDKYNIPFYAGAASSKSLVVFLMLNLLPFAWIFLSMGMGRRMYGDMTGTVGKDAEGSNIDR-SLTFDDVAGIDRAKREVQELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFIYSAGSEFVEMFVGRGAARIRALFQRARKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNKSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREDILRVHTRKTPLGSDVDLAKTAQLTPGMSGADLAGLVNEAAIRAVRR--------------------------SSSMVTQIDFDLAVKDFFRSR 593
            VE+ Y+ FM+L        +S LR++  R+ FL++G  +FTRPV+A   L++FL K+ + F A  AS+   ++ L   L P  W+     M RR  G   G V K A    +    L+F+DVAGID AK EV+E+V MLKSP  Y   GARLP G+L+ GPPGTGKTLLAR +A++AGVPF Y +GS+FVE+FVGRGAAR+RALF+ A   +PCI+F+DELD LGKQRS+RL GSNDEVEQTLNQ+LACMDGL      ++VI ATNRY+ILD ALTRPGR DR+VR+ELPD +GR + LRVHT+   L  DV L K A  TP  SGA+LA L NEAAIR+VRR                          +   VT  DFD A+ DF  SR
Sbjct:  127 VEVSYAAFMQLAARESGR-ISGLRLSLSRYGFLLDGAPAFTRPVRAPSDLVWFLHKHGVDFRAAPASAAGALLPL---LFPLLWLGALYSMMRRQMGGQ-GNVSKRASAQLLAADGLSFEDVAGIDAAKEEVREVVAMLKSPATYAAAGARLPSGVLMCGPPGTGKTLLARVMAAQAGVPFFYCSGSDFVELFVGRGAARMRALFKEAAAVSPCIVFVDELDALGKQRSMRLAGSNDEVEQTLNQMLACMDGLGGESRDIVVIGATNRYDILDPALTRPGRFDRLVRIELPDEAGRLNTLRVHTKSLALAPDVSLRKVAAATPTFSGAELAALTNEAAIRSVRRAVASIAXXXXXXXXXXXXXXXPAHSGAGGPVTMADFDSALVDFVTSR 512          
BLAST of NO08G00590 vs. NCBI_GenBank
Match: CBJ26876.1 (cell division protein [Ectocarpus siliculosus])

HSP 1 Score: 344.7 bits (883), Expect = 5.700e-91
Identity = 205/418 (49.04%), Postives = 269/418 (64.35%), Query Frame = 0
Query:  201 ASFAMVLAFVLLSSVFGGAAGGGAKKAPVEIPYSDFMKLVK-DHGPEVVSRLRIA-PDRFDFLVNGVSSFTRPVKAHPALLFFLDKYNIPFYAGAASSKSLVVFLMLNLLPFAWIFLSMGMGRRMYGDMTGTVGKDAEGSNIDRSLTFDDVAGIDRAKREVQELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVP---------------------FIYSAGSEFVEMFVGRGAARIRALFQRARKQAPCIIFLDELDTLGKQRSLRLGG--SNDEVEQTLNQLLACMDGLDSNKSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREDILRVHTRKTPLGSDVD-LAKTAQLTPGMSGADLAGLVNEAAIRAVRRSSSMVTQIDFDLAVKDFFRSR 593
            A+  +V+ FVL     G  + G    A  E+P S FM+L++   G +VV  +R++      F +NG   +T P++    +   L    IPF A  +      +F ++ LL   +  +  G      G M G+ GK A  + +D SLTF DVAG+D+AK +VQELV M+K+P  +   GARLP G+L+ GPPGTGKTL+AR +A+EAGVP                     F Y +GS+FVEM+VGRGAAR+R LF +A K APCIIFLDELD LGK+RS   GG  +NDE EQTLNQLLACMDGLD+N +GV+VIAATNRY++LD+ALTRPGR DRIVRV++PD +GRE IL+VHTRK  L  DVD L   A+LTPG++GA+LA + NEAAI A RR S  + + DF  +V +F+ SR
Sbjct:   71 ATLLVVMLFVL---AMGFRSAG--TPAVTEVPMSTFMQLMEGKRGADVVESVRVSKTGTMFFKMNGKECYTLPLRVSKEVFKALCNSGIPFRASKSPPGLSFIFPVVYLLAVYYFIVKRGQ-----GSMVGSTGKLASSTELDTSLTFGDVAGVDQAKSQVQELVSMIKNPAPFIAAGARLPSGLLMVGPPGTGKTLMARVMAAEAGVPLPPPRRFRGVGGYLLIGRLPKFYYCSGSDFVEMYVGRGAARVRKLFVKAGKTAPCIIFLDELDALGKERS-GTGGRQTNDEAEQTLNQLLACMDGLDTNNNGVMVIAATNRYDVLDNALTRPGRFDRIVRVDVPDAAGREAILKVHTRKMKL-EDVDVLRAVAELTPGLAGAELATIANEAAISAARRGSQQLLETDFLESVTNFYVSR 476          
BLAST of NO08G00590 vs. NCBI_GenBank
Match: WP_024809443.1 (ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein [Oceanicola sp. HL-35])

HSP 1 Score: 325.9 bits (834), Expect = 2.700e-85
Identity = 187/388 (48.20%), Postives = 247/388 (63.66%), Query Frame = 0
Query:  206 VLAFVLLSSVFGGAAGGGAKKAPVEIPYSDFMKLVKDHGPEVVSRLRIAPDRFDFLVNGVSSFTRPVKAHPALLFFLDKYNIPFYAGAASSKSLVVFLMLNLLPF-----AWIFLSMGMGRRMYGDMTGTVGKDAEGSNI----DRSLTFDDVAGIDRAKREVQELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFIYSAGSEFVEMFVGRGAARIRALFQRARKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNKSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREDILRVHTRKTPLGSDVDLAKTAQLTPGMSGADLAGLVNEAAIRAVRRSSSMVTQIDFDLA 585
            V+ F+L+ ++F   +G G       + YS+F++ V++   E VSR+ +  +R  F       +T        +   L    IP  A +        FL L+LLPF      WI+    M R   G   G +G     + +    +  +TFDDVAGID AK E++E+V+ L++PQK+ +LG ++PKG LL GPPGTGKTLLARA+A EAGVPF   +GS+FVEMFVG GA+R+R +F++A+K APCI+F+DE+D +G+ R + +GG NDE EQTLNQLL  MDG ++N+ GVI+IAATNR ++LD AL RPGR DR V V  PD  GRE IL VH RKTPLG DVDL   A+ TPG SGADLA LVNEAA+ A R     VT IDF+ A
Sbjct:   11 VVLFLLILALFNLFSGTGGTMQSTSVSYSEFVRKVEN---EEVSRVTLDGERVRFRGEDGVEYTTVKPEDAEVTALLIDQGIPVTAESQQQSGFQSFL-LSLLPFVLLIGVWIYF---MNRMQGGGKGGAMGFGKSKAKLLTEKNGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRARGVGIGGGNDEREQTLNQLLVEMDGFEANE-GVIIIAATNRKDVLDPALLRPGRFDRQVTVANPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMIDFESA 390          
BLAST of NO08G00590 vs. NCBI_GenBank
Match: WP_103908946.1 (ATP-dependent zinc metalloprotease FtsH [Thalassococcus halodurans] >SEF60724.1 membrane protease FtsH catalytic subunit [Thalassococcus halodurans])

HSP 1 Score: 324.7 bits (831), Expect = 6.100e-85
Identity = 184/388 (47.42%), Postives = 247/388 (63.66%), Query Frame = 0
Query:  206 VLAFVLLSSVFGGAAGGGAKKAPVEIPYSDFMKLVKDHGPEVVSRLRIAPDRFDFLVNGVSSFTRPVKAHPALLFFLDKYNIPFYAGAASSKSLVVFLMLNLLPF-----AWIFLSMGMGRRMYGDMTGTVGKDAEGSNI----DRSLTFDDVAGIDRAKREVQELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFIYSAGSEFVEMFVGRGAARIRALFQRARKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNKSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREDILRVHTRKTPLGSDVDLAKTAQLTPGMSGADLAGLVNEAAIRAVRRSSSMVTQIDFDLA 585
            V+ F+L+ ++F   +GGG+     +  Y+DF++ V+D     VS + I  ++  F  +  + F         +   L   ++PF A A        FL ++LLPF      W++    M R   G   G +G     + +       +TFDDVAGID AK E++E+V+ L++PQK+ +LG ++PKG LL GPPGTGKTLLARA+A EAGVPF   +GS+FVEMFVG GA+R+R +F++A+K APCI+F+DE+D +G+ R    GG NDE EQTLNQLL  MDG ++N+ GVI++AATNR ++LD AL RPGR DR V V  PD  GRE IL VH RKTPLG DVDL   A+ TPG SGADLA LVNEAA+ A R     VT +DF+ A
Sbjct:   11 VVLFLLVLALFNLFSGGGSTLQSRDASYTDFVQAVED---STVSNVTIDGEQIRFRTSDGTDFVSIKPQDAEVTQLLLDNDVPFRAEAQEQSGFQSFL-ISLLPFLLLIGVWVYF---MNRMQGGGRGGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRNRGSGYGGGNDEREQTLNQLLVEMDGFEANE-GVIIVAATNRRDVLDPALLRPGRFDRQVTVPNPDLKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMVDFENA 390          
BLAST of NO08G00590 vs. NCBI_GenBank
Match: WP_107974240.1 (ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein [Roseivivax pacificus] >PTX52857.1 membrane protease FtsH catalytic subunit [Roseivivax pacificus])

HSP 1 Score: 324.7 bits (831), Expect = 6.100e-85
Identity = 188/388 (48.45%), Postives = 244/388 (62.89%), Query Frame = 0
Query:  206 VLAFVLLSSVFGGAAGGGAKKAPVEIPYSDFMKLVKDHGPEVVSRLRIAPDRFDFLVNGVSSFTRPVKAHPALLFFLDKYNIPFYAGAASSKSLVVFLMLNLLPF-----AWIFLSMGMGRRMYGDMTGTVGKDAEGSNI----DRSLTFDDVAGIDRAKREVQELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFIYSAGSEFVEMFVGRGAARIRALFQRARKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNKSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREDILRVHTRKTPLGSDVDLAKTAQLTPGMSGADLAGLVNEAAIRAVRRSSSMVTQIDFDLA 585
            V+ F+L+ ++F   +GGG+     EI YS+F++ V+D   + VS   I  ++  +  N    +         +   L   NIP  A          FL L+LLPF      WI+    M R   G   G +G     + +       +TFDDVAGID AK E++E+V+ L++PQK+ +LG ++PKG LL GPPGTGKTLLARA+A EAGVPF   +GS+FVEMFVG GA+R+R +F++A+K APCI+F+DE+D +G+ R    GG NDE EQTLNQLL  MDG +SN+ GVI++AATNR ++LD AL RPGR DR V V  PD  GRE IL VH RKTPLG DVDL   A+ TPG SGADLA LVNEAA+ A R     VT  DF+ A
Sbjct:   11 VVLFLLILALFNLFSGGGSTLQSREISYSEFVRAVED---QSVSSATIDGEQIRYRSNDGQDYVTVKPEDAEITQMLIDNNIPVRAEQQEQSGFQAFL-LSLLPFLLLIGVWIYF---MNRMQGGGKGGAMGFGKSKAKLLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRARGQGYGGGNDEREQTLNQLLVEMDGFESNE-GVIIVAATNRRDVLDPALLRPGRFDRQVTVPNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENA 390          
BLAST of NO08G00590 vs. NCBI_GenBank
Match: WP_100929239.1 (ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein [Sagittula sp. P11] >AUC54111.1 cell division protein FtsH [Sagittula sp. P11])

HSP 1 Score: 323.9 bits (829), Expect = 1.000e-84
Identity = 189/388 (48.71%), Postives = 242/388 (62.37%), Query Frame = 0
Query:  206 VLAFVLLSSVFGGAAGGGAKKAPVEIPYSDFMKLVKDHGPEVVSRLRIAPDRFDFLVNGVSSFTRPVKAHPALLFFLDKYNIPFYAGAASSKSLVVFLMLNLLPF-----AWIFLSMGMGRRMYGDMTGTVGKDAEGSNI----DRSLTFDDVAGIDRAKREVQELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFIYSAGSEFVEMFVGRGAARIRALFQRARKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNKSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREDILRVHTRKTPLGSDVDLAKTAQLTPGMSGADLAGLVNEAAIRAVRRSSSMVTQIDFDLA 585
            V+ F+L+ ++F   +G        E  YSDF+K V+      VS   I  ++  +  N    +         +   L   NIP  A +  S    VFL LNLLPF      WI+    M R   G   G +G     + +       +TFDDVAGID AK E++E+V+ L++PQK+ +LG ++PKG LL GPPGTGKTLLARA+A EAGVPF   +GS+FVEMFVG GA+R+R +F++A+K APCI+F+DE+D +G+ R    GG NDE EQTLNQLL  MDG ++N+ GVI+IAATNR ++LD AL RPGR DR V V  PD  GRE IL VH +KTPLG DVDL   A+ TPG SGADLA LVNEAA+ A R     VT IDF+ A
Sbjct:   11 VVLFLLILALFNLFSGNNPTLQSRETGYSDFVKAVESQN---VSSATIDGEQVRYSTNDGQDYVTIKPEDAEVTNLLLDNNIPISAKSQESSGFQVFL-LNLLPFLLLIGVWIYF---MNRMQGGGKGGAMGFGKSKAKLLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRARGQGYGGGNDEREQTLNQLLVEMDGFEANE-GVIIIAATNRRDVLDPALLRPGRFDRQVTVPNPDIKGREKILGVHAKKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMIDFENA 390          
BLAST of NO08G00590 vs. NCBI_GenBank
Match: WP_043142086.1 (MULTISPECIES: ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein [Rhodobacteraceae] >KHQ52590.1 ATP-dependent zinc metalloprotease FtsH [Mameliella alba] >ODM50370.1 cell division protein FtsH [Ruegeria sp. PBVC088] >SDD46544.1 membrane protease FtsH catalytic subunit [Mameliella alba] >OWV42217.1 cell division protein FtsH [Mameliella atlantica] >OWV47342.1 cell division protein FtsH [Ponticoccus lacteus] >OWV62140.1 cell division protein FtsH [Mameliella phaeodactyli] >OWV63948.1 cell division protein FtsH [Alkalimicrobium pacificum] >PTR38889.1 membrane protease FtsH catalytic subunit [Mameliella alba])

HSP 1 Score: 323.6 bits (828), Expect = 1.400e-84
Identity = 188/388 (48.45%), Postives = 243/388 (62.63%), Query Frame = 0
Query:  206 VLAFVLLSSVFGGAAGGGAKKAPVEIPYSDFMKLVKDHGPEVVSRLRIAPDRFDFLVNGVSSFTRPVKAHPALLFFLDKYNIPFYAGAASSKSLVVFLMLNLLPF-----AWIFLSMGMGRRMYGDMTGTVGKDAEGSNI----DRSLTFDDVAGIDRAKREVQELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFIYSAGSEFVEMFVGRGAARIRALFQRARKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNKSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREDILRVHTRKTPLGSDVDLAKTAQLTPGMSGADLAGLVNEAAIRAVRRSSSMVTQIDFDLA 585
            V+ F+L+ ++F   +GGG      E+ YSDF++ V+      VS + I  ++  +  N    +         L   L   NIP  A A        FL L+LLPF      WI+    M R   G   G +G     + +       +TFDDVAGID AK E++E+V+ L++PQK+ +LG ++PKG LL GPPGTGKTLLARA+A EAGVPF   +GS+FVEMFVG GA+R+R +F++A+K APCI+F+DE+D +G+ R    GG NDE EQTLNQLL  MDG ++N+ GVI++AATNR ++LD AL RPGR DR V V  PD  GRE IL VH RKTPLG DVDL   A+ TPG SGADLA LVNEAA+ A R     VT  DF+ A
Sbjct:   11 VVLFLLILALFNLFSGGGTTLQSREVGYSDFVRAVETQN---VSSVTIDGEQVRYRTNEGQDYVTIKPEDAELTNLLLDNNIPVKAEAQEQSGFQSFL-LSLLPFLLLIGVWIYF---MNRMQGGGKGGAMGFGKSKAKLLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRARGQGYGGGNDEREQTLNQLLVEMDGFEANE-GVIIVAATNRRDVLDPALLRPGRFDRQVTVPNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENA 390          
The following BLAST results are available for this feature:
BLAST of NO08G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26544.11.900e-22488.64atp-dependent metalloprotease [Nannochloropsis gad... [more]
XP_005760889.11.400e-9751.92ATP-dependent metalloprotease FtsH [Emiliania huxl... [more]
XP_005773256.11.400e-9751.92ATP-dependent metalloprotease FtsH [Emiliania huxl... [more]
XP_005774095.11.400e-9751.92ATP-dependent metalloprotease FtsH [Emiliania huxl... [more]
CBJ26876.15.700e-9149.04cell division protein [Ectocarpus siliculosus][more]
WP_024809443.12.700e-8548.20ATP-dependent metallopeptidase FtsH/Yme1/Tma famil... [more]
WP_103908946.16.100e-8547.42ATP-dependent zinc metalloprotease FtsH [Thalassoc... [more]
WP_107974240.16.100e-8548.45ATP-dependent metallopeptidase FtsH/Yme1/Tma famil... [more]
WP_100929239.11.000e-8448.71ATP-dependent metallopeptidase FtsH/Yme1/Tma famil... [more]
WP_043142086.11.400e-8448.45MULTISPECIES: ATP-dependent metallopeptidase FtsH/... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009005NSK009005Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00590.1NO08G00590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581966gene_3389Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100409g4gene3982Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00590.1NO08G00590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00590 ID=NO08G00590|Name=NO08G00590|organism=Nannochloropsis oceanica|type=gene|length=3306bp
TTTGACTGTGGGTGCGGCGGGTGCGGATGCGGCATAAGTTGGTGTGTACA
TTTAAAGTGCGAGAGGGGGCACGAGACGGAATAAGCCTCGCAGGCAGCAA
GCACCTCGACGAAGAAGTTCGTTGCCCCTGTTCGTGCCCTTCGGGCGATG
CTGCTGATGACTTACTTGCTCATGGTCGGTCCACAGGAGCCACGGCGATA
CACAAGACCAACAAGTCCGCTGCAACACCAAGCTCGTTGTGGAAGGCACG
CATCTCGAAGCAGGCACGCACTTTTCCTTTTTCTGCGTCGACAACTGGTA
GTTTCTCAATAACAGTTGGGCAACACATTGACGCTACCGTGTCCTTCCTC
TATCCACACACTGCTCGTGTCACGTCCTGACCTCATCGCACCCTGCGCCT
CACTCAACCCTTACTCTTTCTCGTATCTATTGCACTCCCTAAACCCTCAC
ACAACGTAACACAACACAACAAACAAAGGGGACGCTTTTACGCATCGTCT
CCTAATCACACGCATGTGGAGCAGCAGCAGGATGCCACGGAGGAGACCAA
CGCTACCGTCAAGAGGAAAAGCCGGCTCCCTTTCCTCCCTCACTCTCCTC
GTCCTCCCCCTCGTCCTAATCTGCGTGCTGATTGTCGTCACGCAAGCCTT
CGTCCCATCGCAATGCCTCCCCAGCCCTCTCCCTCTCCTTGCCCGCCGCA
CCGTTACTGCCACTACCACCAGCAGTGCTATCTGTCCCTTGTTCGGTAGC
CTCTCTCCCTCGCCCACTCCGTCCTCCTACTCCTCCTCCTCCTCCTTCTC
CTCCTCTCCCTCCTCCCGTACAAACGAAAGAAGACGACACTCCCTTTCCT
CCTGTAGCCTCTCCCCCACCCAATGCACCCGCCTTACCGCCACGGTCACG
GGCGACGACGACAGCGGGAGTGGCAGCAGCAGTAGCAGCGGAAGCAGCAA
CAAGAAGGGCCTGCGAAGCGCCAACAGCAACAACAACCAACGTCGCCCCC
AGGTTTTTATCAAGAAGCTGCAGGCGATCGTTGGACGCTTCCGAATGTTT
ATCCGCAGTAAACTCATGCTGAAGGTGAACGGCCGGCCCATTTTAAAGAT
CACGGGTTGGCATGCATCGTTCGCCATGGTCCTGGCCTTCGTCCTTCTCT
CCTCCGTCTTTGGGGGGGCAGCGGGAGGGGGCGCGAAAAAAGCGCCGGTG
GAAATTCCGTACTCTGATTTCATGAAGCTGGTGAAAGACCATGGACCAGA
GGTGGTGAGCAGGCTCAGAATTGCCCCGGACAGGTTCGATTTCTTGGTCA
ATGGTGTGTCCTCGTTCACCAGGCCGGTGAAGGCCCATCCGGCGTTGTTG
TTCTTCTTGGATAAGTACAACATTCCTTTCTATGCCGGGGCTGCGAGCAG
TAAGAGTTTGGTGGTGTTTTTGATGTTGAATCTGCTGCCGTTTGCGTGGA
TCTTTTTGAGCATGGGCATGGGGAGGCGGATGTACGGGGACATGACGGGG
ACCGTAGGAAAGGATGCGGAAGGGAGTAACATTGACAGGAGCCTCACGTT
CGATGACGTGGCCGGGATCGATAGGGCCAAGAGGGAGGTGCAAGAGCTTG
TCGACATGTTGAAAAGCCCGCAGAAGTATGGCAAGCTGGGTGCTCGGTTG
CCGAAGGGGATTCTCTTGGCGGGCCCGCCGGGGACGGGCAAGACGCTGTT
GGCCCGGGCTCTGGCAAGTGAGGCCGGGGTCCCATTTATCTACTCGGCAG
GGTCGGAGTTCGTGGAGATGTTCGTGGGAAGgtaagaagcgtttggctga
tggggggttgggggggatgaggtttgtgtcttccatagtctattggtcca
cttgactgtgtctctgtgtgtgtgtgtgtgtgagggcgtttatccctcct
tcctctacaaagaatgcaattgctttataatatattatttgatttggata
tatcttgcccctgattagaacaacatatgtagaatctaactcgtctgaac
gtgccacaactgcacggtgtagaccaacctgatataccacacacccattg
actgaggcaattccatccaaaccaaacaaatcttgttctttttatctttc
tttttttcgttcccttttttaaacttcgttgtatatcttacatgctcacc
ttatccctccctttaaacctccttttccctttacccgaaacaccatcatt
acagAGGCGCCGCGCGAATCCGCGCCCTATTCCAACGCGCACGAAAACAA
GCTCCCTGCATCATCTTCCTCGACGAGCTCGACACGTTGGGCAAGCAACG
GTCCTTGCGGTTGGGGGGCAGTAACGACGAGGTGGAGCAGACGTTGAACC
AGCTGTTGGCGTGCATGGACGGGTTGGACAGCAATAAGAGCGGGGTGATT
GTGATTGCGGCCACCAACCGATATGAGATTTTGGACGACGCGCTGACAAG
gtaaggaaacttggaagggagtgtgaagaggaaggggaagaaacaatggc
ctcttgtatcaatatgtttgtagaggaagagcgcagggcacgcagatttt
tacgtctctgactcctctatggacggaatatctcgtcatccacagACCTG
GTCGCTTGGATCGGATCGTTCGGGTGGAGCTGCCTGACCGCAGCGGCCGG
GAGGATATTTTGAGGGTGCATACACGCAAGACCCCCCTAGGGAGCGATGT
GGATCTCGCGAAGACGGCCCAATTGACGCCGGGGATGAGTGGCGCGGACT
TGGCAGGGCTGGTGAACGAGGCGGCCATACGGGCAGTGAGACGCAGTAGC
TCTATGGTGACACAGATTGACTTCGATTTGGCCGTCAAAGACTTCTTTAG
AAGCCGAGgtaagttcaagatattagaaatggagtagtgtacgttgattt
gctccaatttgtttctttacaccattaactcgcaattacaagtttccctt
gaacttgttccgttggtgttggcaaaaaaaatggttcactcatccttcct
gtaccccccccccctcacactcccccccatccttttattttccctcctgt
cctctaatttgttgaacagGCACGGAAGCGGAAAAGAGCTGGAAACGTCT
GGTCGGTAACGTGATGGGTTGAGCGTTTCAAAACTTTGGAATAAATGAAA
AGAAAGAGAGGTGGAGGAAAAGTTGGATGGTTAGAGGAATGAAATATTTT
AATGTGCAGTACATAACTTTTGTGTAGAAAAACACGACATTCTAGCATGA
GCAATAGTAGGAGCAGCAGAAGCAGGAGCAGTAGGATCAGGATCAGGATC
AGGATC
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protein sequence of NO08G00590.1

>NO08G00590.1-protein ID=NO08G00590.1-protein|Name=NO08G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=610bp
MWSSSRMPRRRPTLPSRGKAGSLSSLTLLVLPLVLICVLIVVTQAFVPSQ
CLPSPLPLLARRTVTATTTSSAICPLFGSLSPSPTPSSYSSSSSFSSSPS
SRTNERRRHSLSSCSLSPTQCTRLTATVTGDDDSGSGSSSSSGSSNKKGL
RSANSNNNQRRPQVFIKKLQAIVGRFRMFIRSKLMLKVNGRPILKITGWH
ASFAMVLAFVLLSSVFGGAAGGGAKKAPVEIPYSDFMKLVKDHGPEVVSR
LRIAPDRFDFLVNGVSSFTRPVKAHPALLFFLDKYNIPFYAGAASSKSLV
VFLMLNLLPFAWIFLSMGMGRRMYGDMTGTVGKDAEGSNIDRSLTFDDVA
GIDRAKREVQELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARAL
ASEAGVPFIYSAGSEFVEMFVGRGAARIRALFQRARKQAPCIIFLDELDT
LGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNKSGVIVIAATNRYEILD
DALTRPGRLDRIVRVELPDRSGREDILRVHTRKTPLGSDVDLAKTAQLTP
GMSGADLAGLVNEAAIRAVRRSSSMVTQIDFDLAVKDFFRSRGTEAEKSW
KRLVGNVMG*
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Synonyms
Publications