NO08G00180, NO08G00180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00180 vs. NCBI_GenBank
Match: XP_009828736.1 (hypothetical protein H257_05527 [Aphanomyces astaci] >ETV81999.1 hypothetical protein H257_05527 [Aphanomyces astaci]) HSP 1 Score: 201.1 bits (510), Expect = 7.600e-48 Identity = 95/155 (61.29%), Postives = 123/155 (79.35%), Query Frame = 0 Query: 298 SEHKRLYKYFRGLLKAWEQDLNQRTEEIKRSLQGKMETKTQKQCKDYIRPLFRLCKNKEVPDGIRGNLLEMVDHCQAGEFVKAHEVYLRTAIGNAPWPIGITMVGIHERTGRERISSSKVAHIMNNEMQRKYLTSIKRLMKYAQDKRPDVDPSKK 453 S+ +Y+YF+ +L WE L QR E +KR+ QGK+ T+T KQCKDYIRPLFRLCK+ EVP+ I NLL++V C+ GEFV+A++ Y++ AIGNA WPIG+TMVGIHERTGRE+I+S+K AH+MNNE+QRKYLTS+KRL+ YAQ + PSKK Sbjct: 180 SDEMLVYRYFKTMLSQWELALGQRPETVKRTAQGKIATRTMKQCKDYIRPLFRLCKHHEVPEDILRNLLDIVRFCEGGEFVQANDAYIKMAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNELQRKYLTSVKRLISYAQ-SISNALPSKK 333
BLAST of NO08G00180 vs. NCBI_GenBank
Match: CCA17382.1 (premRNAsplicing factor 18 putative [Albugo laibachii Nc14] >CCA24376.1 premRNAsplicing factor 18 putative [Albugo laibachii Nc14]) HSP 1 Score: 199.5 bits (506), Expect = 2.200e-47 Identity = 94/153 (61.44%), Postives = 125/153 (81.70%), Query Frame = 0 Query: 300 HKRLYKYFRGLLKAWEQDLNQRTEEIKRSLQGKMETKTQKQCKDYIRPLFRLCKNKEVPDGIRGNLLEMVDHCQAGEFVKAHEVYLRTAIGNAPWPIGITMVGIHERTGRERISSSKVAHIMNNEMQRKYLTSIKRLMKYAQDKRPDVDPSKK 453 H +Y++F+ +L+ WE+DL R E++KR++QGK+ +KT KQCKDYIRPLF+LCK++ VP+ I NL+E+V CQA EFV+A++ Y+R AIGNA WPIG+TMVGIHERTGRE+I+++K AH+MNNE QRKYLTS+KRLM Y Q +V PSKK Sbjct: 200 HFIIYRFFKRMLRCWEKDLADRPEDVKRTIQGKIASKTLKQCKDYIRPLFKLCKSERVPNDILPNLVEIVKFCQAKEFVQANDAYIRLAIGNAAWPIGVTMVGIHERTGREKINANKQAHVMNNEGQRKYLTSVKRLMTYCQ-SISNVLPSKK 351
BLAST of NO08G00180 vs. NCBI_GenBank
Match: XP_008619224.1 (hypothetical protein SDRG_14845 [Saprolegnia diclina VS20] >EQC27320.1 hypothetical protein SDRG_14845 [Saprolegnia diclina VS20]) HSP 1 Score: 199.5 bits (506), Expect = 2.200e-47 Identity = 94/152 (61.84%), Postives = 123/152 (80.92%), Query Frame = 0 Query: 301 KRLYKYFRGLLKAWEQDLNQRTEEIKRSLQGKMETKTQKQCKDYIRPLFRLCKNKEVPDGIRGNLLEMVDHCQAGEFVKAHEVYLRTAIGNAPWPIGITMVGIHERTGRERISSSKVAHIMNNEMQRKYLTSIKRLMKYAQDKRPDVDPSKK 453 +++Y++F+ +L WE+ L R E +KRS QGK+ T+T KQCKDYIRPLFRLCK+ VPD I NL+++V C+AGEFV A++ Y++ AIGNA WPIG+TMVGIHERTGRE+I+S+K AH+MNNE+QRKYLTS+KRL+ +AQ DV PSKK Sbjct: 185 RKIYRFFKEMLGRWEEALAARPESVKRSAQGKIATRTMKQCKDYIRPLFRLCKSNTVPDDILKNLVDIVGFCKAGEFVSANDSYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNELQRKYLTSVKRLITFAQ-SITDVLPSKK 335
BLAST of NO08G00180 vs. NCBI_GenBank
Match: CCI48293.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 199.5 bits (506), Expect = 2.200e-47 Identity = 94/153 (61.44%), Postives = 125/153 (81.70%), Query Frame = 0 Query: 300 HKRLYKYFRGLLKAWEQDLNQRTEEIKRSLQGKMETKTQKQCKDYIRPLFRLCKNKEVPDGIRGNLLEMVDHCQAGEFVKAHEVYLRTAIGNAPWPIGITMVGIHERTGRERISSSKVAHIMNNEMQRKYLTSIKRLMKYAQDKRPDVDPSKK 453 H +Y++F+ +L++WE+DL R E++KR++QGK+ +KT KQCKDYIRPLF+LCK + VP+ I NL+E+V CQA EFV+A++ Y+R AIGNA WPIG+TMVGIHERTGRE+I+++K AH+MNNE QRKYLTS+KRLM Y Q +V PSKK Sbjct: 198 HLTIYRFFKKMLRSWEKDLANRPEDVKRTIQGKIASKTLKQCKDYIRPLFKLCKLERVPNDILPNLVEIVKFCQAKEFVQANDAYIRLAIGNAAWPIGVTMVGIHERTGREKINANKQAHVMNNEGQRKYLTSVKRLMTYCQ-SISNVLPSKK 349
BLAST of NO08G00180 vs. NCBI_GenBank
Match: XP_009522597.1 (hypothetical protein PHYSODRAFT_489594 [Phytophthora sojae] >EGZ19880.1 hypothetical protein PHYSODRAFT_489594 [Phytophthora sojae]) HSP 1 Score: 198.7 bits (504), Expect = 3.800e-47 Identity = 92/152 (60.53%), Postives = 122/152 (80.26%), Query Frame = 0 Query: 301 KRLYKYFRGLLKAWEQDLNQRTEEIKRSLQGKMETKTQKQCKDYIRPLFRLCKNKEVPDGIRGNLLEMVDHCQAGEFVKAHEVYLRTAIGNAPWPIGITMVGIHERTGRERISSSKVAHIMNNEMQRKYLTSIKRLMKYAQDKRPDVDPSKK 453 K +Y++F+G+L+ WE+DL R + +KR+ QGK+ KT KQCKDYIRPLF+LCK ++VP I NL+++V C+ GEFV A++ Y++ AIGNA WPIG+TMVGIHERTGRE+I+S+K AH+MNNE QRKYLTS+KRLM YAQ +V PSK+ Sbjct: 217 KMVYRFFKGMLQRWEKDLADRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKQRQVPPDILPNLVDIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNESQRKYLTSVKRLMSYAQ-SISNVLPSKR 367
BLAST of NO08G00180 vs. NCBI_GenBank
Match: XP_024575233.1 (pre-mrna-splicing factor [Plasmopara halstedii] >CEG38864.1 pre-mrna-splicing factor [Plasmopara halstedii]) HSP 1 Score: 198.4 bits (503), Expect = 4.900e-47 Identity = 91/152 (59.87%), Postives = 124/152 (81.58%), Query Frame = 0 Query: 301 KRLYKYFRGLLKAWEQDLNQRTEEIKRSLQGKMETKTQKQCKDYIRPLFRLCKNKEVPDGIRGNLLEMVDHCQAGEFVKAHEVYLRTAIGNAPWPIGITMVGIHERTGRERISSSKVAHIMNNEMQRKYLTSIKRLMKYAQDKRPDVDPSKK 453 K +Y++F+G+L+ WE+DL R +KR+ QGK+ KT KQCKDYIRPLF+LCK+++VP I NL+++V C+ GEFV+A++ Y++ AIGNA WPIG+TMVGIHERTGRE+I+S+K AH+MNNE+QRKYLTS+KRL+ YAQ +V PSK+ Sbjct: 189 KIVYRFFKGMLQNWEKDLANRPAHVKRTAQGKVAVKTMKQCKDYIRPLFKLCKHRQVPADILPNLVDIVTFCRQGEFVQANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNELQRKYLTSVKRLISYAQ-SISNVQPSKR 339
BLAST of NO08G00180 vs. NCBI_GenBank
Match: GAY04415.1 (pre-mRNA-splicing factor 18, putative [Pythium insidiosum]) HSP 1 Score: 198.4 bits (503), Expect = 4.900e-47 Identity = 93/156 (59.62%), Postives = 122/156 (78.21%), Query Frame = 0 Query: 297 LSEHKRLYKYFRGLLKAWEQDLNQRTEEIKRSLQGKMETKTQKQCKDYIRPLFRLCKNKEVPDGIRGNLLEMVDHCQAGEFVKAHEVYLRTAIGNAPWPIGITMVGIHERTGRERISSSKVAHIMNNEMQRKYLTSIKRLMKYAQDKRPDVDPSKK 453 L + +Y++F+ +L WEQDL R + +KR+ QGK+ TKT KQCKDYIRPLF+LCK ++VP I NL+E+V C+ GEFV+A++ Y+R AIGNA WPIG+TMVGIHERTGRE+I+++K AH+MNNE QRKY+TS+KRL+ YAQ V PSKK Sbjct: 227 LEDDVLVYRFFKSMLLRWEQDLADRPDHVKRTAQGKLATKTMKQCKDYIRPLFKLCKRRQVPADILPNLVEIVRFCRMGEFVRANDAYIRLAIGNAAWPIGVTMVGIHERTGREKINANKQAHVMNNEAQRKYITSVKRLISYAQ-SIASVLPSKK 381
BLAST of NO08G00180 vs. NCBI_GenBank
Match: XP_002902267.1 (pre-mRNA-splicing factor 18, putative [Phytophthora infestans T30-4] >EEY56939.1 pre-mRNA-splicing factor 18, putative [Phytophthora infestans T30-4]) HSP 1 Score: 197.2 bits (500), Expect = 1.100e-46 Identity = 92/152 (60.53%), Postives = 122/152 (80.26%), Query Frame = 0 Query: 301 KRLYKYFRGLLKAWEQDLNQRTEEIKRSLQGKMETKTQKQCKDYIRPLFRLCKNKEVPDGIRGNLLEMVDHCQAGEFVKAHEVYLRTAIGNAPWPIGITMVGIHERTGRERISSSKVAHIMNNEMQRKYLTSIKRLMKYAQDKRPDVDPSKK 453 K +Y++F+G+L+ WE+DL R + +KR+ QGK+ KT KQCKDYIRPLF+LCK+++VP I L+E+V C+ GEFV A++ Y++ AIGNA WPIG+TMVGIHERTGRE+I+S+K AH+MNNE QRKYLTS+KRLM YAQ +V PSK+ Sbjct: 198 KMVYRFFKGMLQRWEKDLASRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKHRQVPSDILPILVEIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNESQRKYLTSVKRLMSYAQ-SISNVLPSKR 348
BLAST of NO08G00180 vs. NCBI_GenBank
Match: ETI52345.1 (hypothetical protein F443_04484 [Phytophthora parasitica P1569] >ETK92235.1 hypothetical protein L915_04356 [Phytophthora parasitica] >ETL45616.1 hypothetical protein L916_04322 [Phytophthora parasitica]) HSP 1 Score: 196.4 bits (498), Expect = 1.900e-46 Identity = 91/152 (59.87%), Postives = 122/152 (80.26%), Query Frame = 0 Query: 301 KRLYKYFRGLLKAWEQDLNQRTEEIKRSLQGKMETKTQKQCKDYIRPLFRLCKNKEVPDGIRGNLLEMVDHCQAGEFVKAHEVYLRTAIGNAPWPIGITMVGIHERTGRERISSSKVAHIMNNEMQRKYLTSIKRLMKYAQDKRPDVDPSKK 453 K +Y++F+G+L+ WE+DL R + +KR+ QGK+ KT KQCKDYIRPLF+LCK+++VP I +L+++V C+ GEFV A++ Y++ AIGNA WPIG+TMVGIHERTGRE+I S+K AH+MNNE QRKYLTS+KRLM YAQ +V PSK+ Sbjct: 197 KMVYRFFKGMLQRWEKDLANRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKHRQVPPDILPHLVDIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKIHSNKQAHVMNNESQRKYLTSVKRLMSYAQ-SISNVLPSKR 347
BLAST of NO08G00180 vs. NCBI_GenBank
Match: ETL98787.1 (hypothetical protein L917_04202 [Phytophthora parasitica] >ETM51952.1 hypothetical protein L914_04304 [Phytophthora parasitica]) HSP 1 Score: 196.4 bits (498), Expect = 1.900e-46 Identity = 91/152 (59.87%), Postives = 122/152 (80.26%), Query Frame = 0 Query: 301 KRLYKYFRGLLKAWEQDLNQRTEEIKRSLQGKMETKTQKQCKDYIRPLFRLCKNKEVPDGIRGNLLEMVDHCQAGEFVKAHEVYLRTAIGNAPWPIGITMVGIHERTGRERISSSKVAHIMNNEMQRKYLTSIKRLMKYAQDKRPDVDPSKK 453 K +Y++F+G+L+ WE+DL R + +KR+ QGK+ KT KQCKDYIRPLF+LCK+++VP I +L+++V C+ GEFV A++ Y++ AIGNA WPIG+TMVGIHERTGRE+I S+K AH+MNNE QRKYLTS+KRLM YAQ +V PSK+ Sbjct: 197 KMVYRFFKGMLQRWEKDLANRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKHRQVPPDILPHLVDIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKIHSNKQAHVMNNESQRKYLTSVKRLMSYAQ-SISNVLPSKR 347 The following BLAST results are available for this feature:
BLAST of NO08G00180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00180 ID=NO08G00180|Name=NO08G00180|organism=Nannochloropsis oceanica|type=gene|length=3677bpback to top protein sequence of NO08G00180.1 >NO08G00180.1-protein ID=NO08G00180.1-protein|Name=NO08G00180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=455bpback to top protein sequence of NO08G00180.2 >NO08G00180.2-protein ID=NO08G00180.2-protein|Name=NO08G00180.2|organism=Nannochloropsis oceanica|type=polypeptide|length=455bpback to top Synonyms
Publications
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