NO07G04230, NO07G04230 (gene) Nannochloropsis oceanica

Overview
NameNO07G04230
Unique NameNO07G04230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4848
Alignment locationchr7:1189487..1194334 +

Link to JBrowse

Properties
Property NameValue
DescriptionBZIP tanscription factor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1189487..1194334 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G04230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04230.1NO07G04230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|637630gene_2775Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04230.1NO07G04230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04230 ID=NO07G04230|Name=NO07G04230|organism=Nannochloropsis oceanica|type=gene|length=4848bp
ATGTCCGCAACAGGCACAGGACCGCCAGAGAGCGgtaagattgcgggaag
gaggctggggtcgtgggtctgatagttgttttatttactgttcaacctcg
agttccgcttcttcattatgttatcgttattccttttttctactagGCAA
CAAGCGTCGACGGGCCCCAGCGCTGCCGCAAAATCACCAGCAGCACCAGC
AGCACCATCTTCAGTCGCCCCACCCAGCCACGATGCCGAAGCAGCAGCGC
GAGATGCCCGATAATCCTCTCCTGGGGCCTCCGCCGCCGCCGATGCCGTT
TTCGAGTGCGCCACCCTCTCATTACCATGAATCTCAACATCTGTCACATC
AGCCAGGAGCAAAAGGAGGAAGAGGTGGAGAAGGAGGAGGTAGAGATGGG
GGAGTGGAAAGCGCAGTCAGTCCCGCGCGGAGACTGAAGGTCGAGGGACC
TCACGGCTCGGCGATTGCAGCAGCAGCAGCAACGGCCGAGGGAGCACACG
GTAGCGGCGAATACAATGGACAATCGCATCATTCCGTGGGGGGGGGGATA
GGAGGGAATGGAAGAGGGGGCCAAGCGGCGAGTCTCAGCTCGATGATGAA
CGACCGCATCAATAACTATCATGACTACCACCACCAGCACCAGCAGTACC
AGCAGCAGCAATACCACCACCACCCCTACCAGCATCAACACAGCCAGATG
GAACCACACCAATCACACCACCCTACTCCACTTCCTCTTCCTCCCCACAC
GCGTGCCCCCGCTCCTACTGCTGCTGCTCCTTCTCCCTACGAAGAATTTC
ACGGTCTAGAGACATCGCCTAGTGCGGTGTTTGCCTCGGCAGGCGTGCCT
TTGAGCTCAGCCGTGAAAGCCAAGCTCGgtgagtgtagattggaaaggaa
tagacggaaggagggagggagtgggggagagaaacgtatgctgtttacgt
gttcgtatttcctgtgtttatgagatttcacattctcaccctcccaccct
ccctccctccctccctccttcccctcccgcagAAAATCAAATCAAAACCG
CCATCGCCCAAGGCCAGCCCTCGCAGCATCTGAGGCTTATAATCCAAGAT
CACCTGCGGATAGAAGAAAAGAAGCACAGAAAGCGGGCGGCCAATCGGCG
TTCGGCCTCCTCCTCCCGGGCCCGGAAGAAGAAGTACATCGAGCGGCTCG
CCAACGAGAACAGgtgcgggggcttgggggagggaaggatggaggggaga
aggggaagatgagagcatttctgtccgtttcgcttgactaagctatttca
catcctcaccttcccctcttccctccctcccttccttcccttccttcctt
ccttccctctttcccaccgtgcttgcctcagGCGCCTCCAACGCATCTCA
CGCATCCTGGCCATTCTTCCAGACCTCGTCATGGTGGTGAACGAGGAGGG
ACGCATCACCTTCGCCTCGTGGCGATCCCAGAAAATGCTGCAGgtacgac
aaacacctccctcccccctccttccctccttccctccctccctccctctt
ccttcccttgactcctgcattgatcctccatttcctctttctctccctcc
ctctgtctcctctctcccttgactcctctattgatcctccatttcctctt
tctctccctccctccctcttccttcccttgactcctgcattgatcctcca
ttccccccttctctccctccctccctcttccttccctgcagCATTCCGAT
GTGTTGGTGGgtaagaacatcttccagctgacccctcccgccttccacga
ctgcatcacctccgccatacaaaccacgctgaaagagctcacgctgcagG
AGAGCAGGGATGGAGGGCCGGAGGGAGGGGAAGAGGGAATGGACGTGGCG
GCGGCAGTGGGGGGGTCACTGCCGCCGTCGTCACAGCAACAGCAGCAGCA
GCATTACTCACAAGGGGGGGGGGATCCGGCTCCTTGACTGCGACTGGACG
GCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCCTTGGCATGGAAGGAGTG
GTGCGCCGCATGACGGTGGAGGACAGAAAGGAGAGAGGAAAGGAGAAAGG
AAGGGAGGGAGGGAGGGAGGAGCACCCTGCCACGGCGATGTTATCATCTG
CTGATGGGAACTTGGAGCCAGGTGGGGCCTTGCCCTCCTCCTCCTTTTCC
TCCTCCTCGCCCTCCCATCATGCACACCGCCAGCAGCAGCATCTCCAGAG
GGGCTCGGCTTCTACGAGCACCATGCTGCTGGGCGCGGGGGGAGGAGGCG
GGGAATGCCACAAGAAGAAGAACAAGAACAGCAGCAGCAGCGGTAGCTCC
AGTGGCGATGGAAGCCATTCCGGTTTGCCTTCCCATAAGGAAGGAGTAGG
AGGAGAAAAGAAGAAGGAGGGGAGGGAGGGGGGGAGGGAGGGAGGACTGT
CCGATTCAGGGAGTGAGGAAAATTATTCACTCTCGAGCGATTCCGGCTCG
TCCAGCGACAGTGGTGGGGGAGGgtacgtgcctctccctctctctcgccc
tccctccctccctccctccctgcctctctttttctcaggaagagtgctct
tgccagcgacccacgcacacgctcactcctccctcccttccgatccctcc
ctcagAAGCGGGACAGCAGACGCCTCCGCATGTCATCACTCCTCAGGGGG
CATCAACAGCCAGCGCCAGTGCGCCCAGCAGGCCACCACCAGCATCAAGA
AGCAGCAGCAGCAGCAGCTGGTGCAGCCGCCGCACCACCACCAACATCAG
CAAAAGGAGCAGCAGCAGCTGCTGCTGCCGGCACAGGGGCCCCTCGTGAG
TGCTGTTCTCGGGGATGAAGCGACCGAGAGGAAGCAGCAGGCGAAGGAGG
GACAGAGGGAGGGAGGGCGGCAGCGGGGACGCGTCTGCTTGTTGCGGCGG
GACGGTTCGGCCCTCTGGTGCACAATGCGTGCGACGATATTCCTCCGGCC
GGTGGGAGGAGGGGGAGAGGGGGAGGGGGGAAGCGAGGACGAGGAGGGGG
AGGGGGAGGGTTTGGGGGAGGAGCTGTCCACGCTCGTGGACATGGGCGGC
GTGAAGAGCGAAGGGGAGGAGGAGGGGGGCTGGTCGGGACGGGAGGGGGG
AAGTGGGAAAGGGGGAGGAGGGTCACTGGTGCACCCCAGATACGCCGCCA
CAGTGGGGAGGGCGAGAGGGGAGGGAGGAAGAGCAGCAGCAGCAGCAGCA
Ggtacagtgctatcggcaagagggtgcttgggtttctttctcttctcctt
ttgcctcactcttcccgtgaccgccatatgattcctccctccctcccttc
ctccccccctccctccctcagCCCCCGAAGTCATCCTATCCTTCCGTCCT
ATCGATCATGAGGAGAGCGTCCCTCCCGTCCGGGCTGCCCGGCAGCTCCC
TCCTTCCCTTTATTCCTCTCCCCCTTCCTCTCTCCTTCCCCAAACACACA
CTTCCACGGGCTCTTCCTCCTCCTCGCGCCCTACCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCCATTCCTC
CTCCCATTCCATCCGCGGCGCCCCCCCCGGGAGTCTCTCTGGTGGCTCGG
GAGAGGGAGGGGAGGGCGGGAGGGAAGGTAGCAAGAAGGTAAAGTCTTCC
AAGCCCTCCCCTTCATCCAGAGGCAAGGGGCGTGCCTCGGCCGCCCGGGA
TGGGATCAGTGCTGCTGCGCCGAATGCGTCCTCCTTTAAGCCCTCCTTTC
CCTTCGTGGCGGTAGACGATGGAGAAAGAGGTGTCATGTGGAGTCAGCCC
AGCACCAGCAGCAGCAGCAGTAGCAGCGTTCGCACCCCTGACGCCTCCAC
CCTCTCCCATTCCCTCTCGTCCTCGTCTTCTTTCTCTCCCTCTCGGACCA
TTCTCCGGAGAGAGAACGCTGAACGTCTCGCGGCTGTTGGTGCTGCTGCT
CCCGATGCTGTCCTCCCTCCCTCCAGCCAAAGAGACGGAGGCACAGGAGG
AGGAGTGGCAGCAGCAACCACGTCAGCAGCAACATCAGCAGCAGCGGCAG
CGGCAGCGGCAGCAGCGGTGGCGGCAGGAAGGAGGGAGGCAGCCGAGATG
GAGGCAGCCCGGAGTCTGATGCGCTTCATGACCACCTCCTCCGTCCCTTC
CTCTTCCCCCTCTTCCTCTTCTCCTTCGAGGCTCGGGTCGGACTAAGATG
GAGGGTGAGGAGGAGGGCGTGGGGGAGGAGGCGTGGATAGAGGTAGAAAT
GTGCCTCTGTCAGAGAAGAATTATTGCGTCGTCAACAGCTTAGTTTGGCA
GCAGAATAGAGGGAAGGGAGGAAGGCGGGAGTAGGGCTACCTAATTGTTT
TTTAATAGGAAATTGACATTAATAGCAACAACAACCAGCTTGGGGGGAGC
AAAGGAGGACAATAAAATGAAAACAAAGAGTAGGAGGTTATTGGAAGGGT
GAGAGGGAGAAATGATTTGAAAAAGCAGGAGAAGCCTCTTATCGCGCCTA
TATAGATAAGATAAAAACAGTTGCACGTAATAAATTTCATAAGAGAAATC
GTCCCGTTACTGCCACAGTCCTTGTGATGCGGCTAGAGGAAAACAATAAA
GAGGAGGAAAAGAGGAAAAGGAGGGACGGAGAATATGACGTAAATAACAA
TACACATTGGAATATTGCCTGATGAGAAACATGGGCAGTGCGAATGAATA
CGCAAAAGTATGAGTAGATGTGAGTGAAGAAGAAGTGACTTTAGCTTA
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protein sequence of NO07G04230.1

>NO07G04230.1-protein ID=NO07G04230.1-protein|Name=NO07G04230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1091bp
MSATGTGPPESGNKRRRAPALPQNHQQHQQHHLQSPHPATMPKQQREMPD
NPLLGPPPPPMPFSSAPPSHYHESQHLSHQPGAKGGRGGEGGGRDGGVES
AVSPARRLKVEGPHGSAIAAAAATAEGAHGSGEYNGQSHHSVGGGIGGNG
RGGQAASLSSMMNDRINNYHDYHHQHQQYQQQQYHHHPYQHQHSQMEPHQ
SHHPTPLPLPPHTRAPAPTAAAPSPYEEFHGLETSPSAVFASAGVPLSSA
VKAKLENQIKTAIAQGQPSQHLRLIIQDHLRIEEKKHRKRAANRRSASSS
RARKKKYIERLANENRRLQRISRILAILPDLVMVVNEEGRITFASWRSQK
MLQHSDVLVGEQGWRAGGRGRGNGRGGGSGGVTAAVVTATAAAALLTRGG
GSGSLTATGRPSSSSSSSSSSSSSSSSSSSSSSSSSFLGMEGVVRRMTVE
DRKERGKEKGREGGREEHPATAMLSSADGNLEPGGALPSSSFSSSSPSHH
AHRQQQHLQRGSASTSTMLLGAGGGGGECHKKKNKNSSSSGSSSGDGSHS
GLPSHKEGVGGEKKKEGREGGREGGLSDSGSEENYSLSSDSGSSSDSGGG
GSGTADASACHHSSGGINSQRQCAQQATTSIKKQQQQQLVQPPHHHQHQQ
KEQQQLLLPAQGPLVSAVLGDEATERKQQAKEGQREGGRQRGRVCLLRRD
GSALWCTMRATIFLRPVGGGGEGEGGSEDEEGEGEGLGEELSTLVDMGGV
KSEGEEEGGWSGREGGSGKGGGGSLVHPRYAATVGRARGEGGRAAAAAAA
PEVILSFRPIDHEESVPPVRAARQLPPSLYSSPPSSLLPQTHTSTGSSSS
SRPTSSSSSSSSSSSSSSSSSSSHSSSHSIRGAPPGSLSGGSGEGGEGGR
EGSKKVKSSKPSPSSRGKGRASAARDGISAAAPNASSFKPSFPFVAVDDG
ERGVMWSQPSTSSSSSSSVRTPDASTLSHSLSSSSSFSPSRTILRRENAE
RLAAVGAAAPDAVLPPSSQRDGGTGGGVAAATTSAATSAAAAAAAAAAVA
AGRREAAEMEAARSLMRFMTTSSVPSSSPSSSSPSRLGSD*
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Synonyms
Publications