NO07G04110, NO07G04110 (gene) Nannochloropsis oceanica

Overview
NameNO07G04110
Unique NameNO07G04110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2691
Alignment locationchr7:1148405..1151095 +

Link to JBrowse

Properties
Property NameValue
DescriptionS-layer domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1148405..1151095 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
Vocabulary: Biological Process
TermDefinition
GO:0030245cellulose catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008810cellulase activity
Homology
BLAST of NO07G04110 vs. NCBI_GenBank
Match: WP_012772681.1 (S-layer protein [Paenibacillus sp. JDR-2] >ACS99359.1 S-layer domain protein [Paenibacillus sp. JDR-2])

HSP 1 Score: 282.0 bits (720), Expect = 6.700e-72
Identity = 179/485 (36.91%), Postives = 239/485 (49.28%), Query Frame = 0
Query:   70 FYFVSFNIPELTFIQD-PWRLPTRWEQTDALRSVLHQGGRVARPYTLSIEDKIVHPDPARRCHVEWDPKSQKFCLNEQYMQVLDQALDVAREMGIRLILPLIDQWTWVGGVESMARWRGFVGKDCARAFWEEDVCLQDWGEVIRAVVGRRNTINGALYREDPTILAWETGNEL-DCPSAWTIRMARIIKEADECRHLVIDGHHGVDPGVLGEESIDIVSRHYYPSGDGSTADSPILSSITTCTLPPSSFVDALFSDLHACQGKKPFFVGEFGFASLSSTASFLSTLVAQAQAGQGVIGACLWSLRFRSFRGGFYFHEEPWGFNVFW-AYHWPGFPSGDRYDERGMMSLLHTYGHLCFSHDSGIGQNSNSKPCVSLPSIPFSLPLPVPAPPRLLSVTAQGLLTFRGSTSARSYELHRCRDIENGGGRGERRGGGDWMVVERGVIDSWVPEQGQVLDKSLMRSPPSDFFYRLVAVNETGCSKPSGVL 552
            F F+S N+P L+ ++D  WR PT WEQ DA ++++  GG V RPY LS+       D  R  H+       K   NE      D+ + +A E GI LILP +DQ+ W GG+   A +RG   KD   AFW +   + D+  VI   + R NT  G  Y++DPTILAWETGNEL    S+WT  MA  IK  D   HLV+DG +G+D   L +++IDIVS HYYP                       S+   +  D +   GKKPF VGEFGF   +   +FL   +       G  GA +WSLR+ S  GGFY H E     VF+ AY WPGFPSGD +DE  M++ L          D        S+P    PS      LP P  P +L V +   +++ GS  A SY + R    + G           W  V   V D+ VP + Q+ D +   +  S ++YR+ A N  G S PS V+
Sbjct:   62 FRFISANVPTLSMVEDIYWRTPTEWEQEDAFKTLVQMGGTVTRPYVLSVRKADDPADMVR--HIMGVGSDDKLIFNEDAFVAYDKMIQLAGEYGIHLILPFVDQYQWQGGIAEYAAFRG-KSKD---AFWTDPQLIADFKSVISYTLNRVNTFTGVAYKDDPTILAWETGNELVPQSSSWTHDMATYIKSID-ANHLVLDGKYGIDDASLTDDAIDIVSNHYYPD-------------------HYPSYASQVNVDKNKAAGKKPFIVGEFGFKPTNELGAFLDNAIE-----NGTSGAMIWSLRYHSRDGGFYPHTESTFNGVFYGAYRWPGFPSGDGFDETNMLNTL---------RDKAFEIRGISEP----PS------LPKPDAPVMLPVDSVSTISWLGSVGASSYRVERSEQPDRG-----------WTTVGENVYDA-VPTESQLFDDTSAVTGQS-YYYRVTAKNSAGESAPSAVI 483          
BLAST of NO07G04110 vs. NCBI_GenBank
Match: WP_091188239.1 (hypothetical protein [Paenibacillus catalpae] >SFE77939.1 Carbohydrate binding domain (family 11) [Paenibacillus catalpae])

HSP 1 Score: 268.5 bits (685), Expect = 7.600e-68
Identity = 174/484 (35.95%), Postives = 241/484 (49.79%), Query Frame = 0
Query:   70 FYFVSFNIPELTFIQD-PWRLPTRWEQTDALRSVLHQGGRVARPYTLSIEDKIVHPDPARRCHVEWDPKSQKFCLNEQYMQVLDQALDVAREMGIRLILPLIDQWTWVGGVESMARWRGFVGKDCARAFWEEDVCLQDWGEVIRAVVGRRNTINGALYREDPTILAWETGNELDCPS-AWTIRMARIIKEADECRHLVIDGHHGVDPGVLGEESIDIVSRHYYPSGDGSTADSPILSSITTCTLPPSSFVDALFSDLHACQGKKPFFVGEFGFASLSSTASFLSTLVAQAQAGQGVIGACLWSLRFRSFRGGFYFHEEPWGFNVFW-AYHWPGFPSGDRYDERGMMSLLHTYGHLCFSHDSGIGQNSNSKPCVSLPSIPFSLPLPVPAPPRLLSVTAQGLLTFRGSTSARSYELHRCRDIENGGGRGERRGGGDWMVVERGVIDSWVPEQGQVLDKSLMRSPPSDFFYRLVAVNETGCSKPSGV 551
            F F+S N+P L+ ++D  WR P+ WEQ DA ++++  GG V RPY LS+       D  R  H+       K   NE+     D+ +++A E GI+L+LP +DQ+ W GG+   A +RG   KD   AFW +   + D+  VI   + R NT  G  Y++DP ILAWETGNEL   S  WT  MA  IK  D   HLV+DG +G+D   L +++IDIVS HYYP                       S+   +  D +   GKKPF VGEFGF   +   +FL   +       G  GA +WSLR+ S  GGFY H E     VF+ AY WPGFPSGD +DE  M++ L          D        S+P    P+      L  P    +L V +   +++ GS  A SY++ R          G+  GG  W+ V   V D+ VP + Q+ + +   +  S ++YR+ A N  G S PS V
Sbjct:   59 FRFISANVPTLSMVEDIYWRTPSEWEQEDAFKTLVQMGGTVTRPYVLSVRKADDPADMVR--HIMGVGSDDKLIFNEEAFVAYDKMIELAGEYGIKLLLPFVDQYQWQGGITEYAAFRG-KSKD---AFWTDPQLIADFKSVINYTLNRVNTFTGVAYKDDPAILAWETGNELVPQSKTWTHDMAAYIKSIDG-NHLVLDGKYGIDDASLTDDAIDIVSNHYYPD-------------------HYPSYASQVNVDRNKAAGKKPFIVGEFGFKPTNELGAFLDNAIE-----NGTSGAMIWSLRYHSRDGGFYPHTESTFNGVFYGAYRWPGFPSGDGFDETNMLNTL---------RDKAFEIRGISEP----PA------LEKPEAAVMLPVDSVSTISWLGSVGASSYKVER---------SGQPDGG--WVTVGEDVYDA-VPTESQLFNDTTAVTGES-YYYRVTAKNSAGESAPSAV 479          
BLAST of NO07G04110 vs. NCBI_GenBank
Match: WP_091223795.1 (hypothetical protein [Paenibacillus sp. BC26] >SFT16700.1 Cellulase (glycosyl hydrolase family 5) [Paenibacillus sp. BC26])

HSP 1 Score: 267.7 bits (683), Expect = 1.300e-67
Identity = 173/490 (35.31%), Postives = 244/490 (49.80%), Query Frame = 0
Query:   70 FYFVSFNIPELTFIQD-PWRLPTRWEQTDALRSVLHQGGRVARPYTLSIEDKIVHPDPARRCHVEWDPKSQKFCL--NEQYMQVLDQALDVAREMGIRLILPLIDQWTWVGGVESMARWRGFVGKDCARAFWEEDVCLQDWGEVIRAVVGRRNTINGALYREDPTILAWETGNEL-DCPSAWTIRMARIIKEADECRHLVIDGHHGVDPGVLGEESIDIVSRHYYP---SGDGSTADSPILSSITTCTLPPSSFVDALFSDLHACQGKKPFFVGEFGFASLSSTASFLSTLVAQAQAGQGVIGACLWSLRFRSFRGGFYFHEEPWGFNVFW-AYHWPGFPSGDRYDERGMMSLLHTYGHLCFSHDSGIGQNSNSKPCVSLPSIPFSLPLPVPAPPRLLSVTAQGLLTFRGSTSARSYELHRCRDIENGGGRGERRGGGDWMVVERGVIDSWVPEQGQVLDKSLMRSPPSDFFYRLVAVNETGCSKPSGVL 552
            F F+S N+P L+ I+D  WR+P  WEQ DA ++++  GG V RPY LS++      D          P + +  L  NE+  + LD+ L +A + G+R+ILP +DQ+ W GG++  A +RG        AFW +   + D+  V+  V+ R N+  G  Y++DP IL WETGNEL     AWT  +A  IK  D   HLVIDG +G+D   L + +IDIVS HYYP   S  G+ A+                       D+   +GKK F +GEFGF   +    FLS +        G  GA +WSLR  +  GGFY H E     VF+ AY WPGFPSGD +DE  ++  L  + +    H  GI +            IP   PLP+PA P+LL + A   +++ GS  A SY + R   +E           G W VV   V D+   E     D S +    + ++YR+ A N +G S  S ++
Sbjct:   59 FRFISANVPTLSMIEDIYWRVPMAWEQEDAFQALVQLGGTVTRPYVLSVK----KADDTTEERAVMGPATPEGPLQFNEEVFKALDKMLQLANQYGVRIILPFVDQYQWQGGIKEYAAFRG----KSEAAFWSDPQLIADFKSVVAHVLNRVNSYTGVAYKDDPAILGWETGNELVPASQAWTRDIAAYIKSLDS-NHLVIDGKYGIDDASLNDPNIDIVSNHYYPDHYSDYGAQAN----------------------LDMGKARGKKAFIIGEFGFKPTAQVDDFLSIV-----EESGASGAMIWSLRMHNRDGGFYPHTESVKDGVFYGAYRWPGFPSGDGFDETNLLRTLSKHAY----HIRGIDE------------IP---PLPIPATPQLLPIDAVSTISWLGSAGASSYTVERADAVE-----------GPWSVVGDRVSDAVEGETQLFHDTSAVTG--ASYYYRVKANNASGSSDYSAMV 480          
BLAST of NO07G04110 vs. NCBI_GenBank
Match: WP_090983281.1 (hypothetical protein [Paenibacillus sp. CF384] >SDX45111.1 Carbohydrate binding domain (family 11) [Paenibacillus sp. CF384])

HSP 1 Score: 266.5 bits (680), Expect = 2.900e-67
Identity = 173/482 (35.89%), Postives = 238/482 (49.38%), Query Frame = 0
Query:   70 FYFVSFNIPELTFIQD-PWRLPTRWEQTDALRSVLHQGGRVARPYTLSIEDKIVHPDPARRCHVEWDPKSQKFCLNEQYMQVLDQALDVAREMGIRLILPLIDQWTWVGGVESMARWRGFVGKDCARAFWEEDVCLQDWGEVIRAVVGRRNTINGALYREDPTILAWETGNEL-DCPSAWTIRMARIIKEADECRHLVIDGHHGVDPGVLGEESIDIVSRHYYP---SGDGSTADSPILSSITTCTLPPSSFVDALFSDLHACQGKKPFFVGEFGFASLSSTASFLSTLVAQAQAGQGVIGACLWSLRFRSFRGGFYFHEEPWGFNVFW-AYHWPGFPSGDRYDERGMMSLLHTYGHLCFSHDSGIGQNSNSKPCVSLPSIPFSLPLPVPAPPRLLSVTAQGLLTFRGSTSARSYELHRCRDIENGGGRGERRGGGDWMVVERGVIDSWVPEQGQVLDKSLMRSPPSDFFYRLVAVNETGCS 546
            F F+S N+P L+ I+D  WR+PT WEQ DA R+++  GG V RPY LS+  K        R  +           NE+  + LD+ L +A + G+R+ILP +DQ+ W GG++  A +RG        AFW +   + D+  VI  VV R N+  G  Y++DP IL WETGNEL     AWT  +A  IK  D   HLVIDG +G+D   L + +IDIVS HYYP   S  G+ A+                       D+   +GKK F +GEFGF   +    FL+ +        G  GA +WS+R  +  GGFY H E     VF+ AY WPGFPSGD +DE  ++  L  + +    H  GI +            +P   PLPVP  P+LL +     +++ GS  A SY + R     +     E    G W VV  GV D+   E     D S +    + ++YRL A N +G S
Sbjct:   59 FRFISANVPTLSMIEDIHWRVPTAWEQEDAFRALVQMGGNVTRPYVLSV--KKADDTTEERAVMGPATPGGPLQFNEEVFKALDKMLQLANQYGVRIILPFVDQYQWQGGIKEYAAFRG----KSEAAFWSDPQLVADFKSVIAHVVNRVNSYTGVAYKDDPAILGWETGNELVPSSQAWTSDIAAYIKSLD-ANHLVIDGKYGIDDASLNDPNIDIVSNHYYPDHYSDYGAQAN----------------------LDMGKARGKKAFIIGEFGFKPTAQVEEFLNIV-----EESGASGAMIWSMRMHNRDGGFYPHTESVKDGVFYGAYRWPGFPSGDGFDETNLLRALSRHAY----HIRGINE------------VP---PLPVPDTPQLLPINEVSTISWLGSVGASSYTVER----SDADAVAE---DGAWSVVGNGVSDAVEGETQLFHDTSAVTG--ASYYYRLKANNASGSS 478          
BLAST of NO07G04110 vs. NCBI_GenBank
Match: WP_056613140.1 (hypothetical protein [Paenibacillus sp. Soil750] >KRE71416.1 hypothetical protein ASL11_10220 [Paenibacillus sp. Soil750])

HSP 1 Score: 260.4 bits (664), Expect = 2.100e-65
Identity = 171/487 (35.11%), Postives = 241/487 (49.49%), Query Frame = 0
Query:   70 FYFVSFNIPELTFIQDP-WRLPTRWEQTDALRSVLHQGGRVARPYTLSIEDKIVHPDPARRCHVEWDPKSQKFCLNEQYMQVLDQALDVAREMGIRLILPLIDQWTWVGGVESMARWRGFVGKDCARAFWEEDVCLQDWGEVIRAVVGRRNTINGALYREDPTILAWETGNELDCP-SAWTIRMARIIKEADECRHLVIDGHHGVDPGVLGEES-IDIVSRHYYPSGDGSTADSPILSSITTCTLPPSSFVDALFSDLHACQGKKPFFVGEFGFASLSSTASFLSTLVAQAQAGQGVIGACLWSLRFRSFRGGFYFHEE-PWGFNVFWAYHWPGFPSGDR-YDERGMMSLLHTYGHLCFSHDSGIGQNSNSKPCVSLPSIPFSLPLPVPAPPRLLSVTAQGLLTFRGSTSARSYELHRCRDIENGGGRGERRGGGDWMVVERGVIDSWVPEQGQVLDKSLMRSPPSDFFYRLVAVNETGCSKPSGVL 552
            F F+  N+P LT ++D  W++PT WEQ DA +++   G    R Y LS++    +P   R  HV    +      NE+    LD+AL +A E GIRLI+P +DQ+ W GG+   A++RG   KD   AFW +    +D+ + I  V+ RRNTI   LY++DP ILAWETGNEL  P SAWT  +   IK  D   HL+IDG +G+D   L E S IDIVS HYYP+                     +SF      D +  +GKKPF+VGEFGF   S    FL+ ++       G  GA +WSLR+ S  GGF+ H E  +G   + AY WPGFP+G++ ++E  ++ LL    +          +   SKP + LP  P  LP           +     + ++GST A +Y + R                G W +V   V D++  +    L   +     + +FYR  A N  G S  S V+
Sbjct:   56 FRFIGANVPTLTMVEDGYWQVPTEWEQRDAFKALQQMGATATRTYVLSVKKDTDYPGMIR--HVVGPNQ-----FNEEAFVALDRALALANEYGIRLIIPFVDQYEWWGGIAEYAKFRG-KSKD---AFWTDPDIKKDFKDTISYVLNRRNTITNKLYKDDPAILAWETGNELTPPSSAWTTEIGAFIKNMD-TNHLLIDGKYGIDASSLEESSPIDIVSNHYYPN-------------------HYASFASQANIDKNMAKGKKPFYVGEFGFIPKSDLTPFLANVIE-----NGTSGALIWSLRYHSEDGGFFRHTEGTYGGTFYEAYKWPGFPAGEQGFEESSVLGLLRDKAYEI--------RGITSKPALPLPEAPIMLP-----------IDTVSRIGWKGSTGATAYTVER-----------SVYANGPWDIVGAQVYDAYKTD----LFDDMTTVTGATYFYRTKARNTVGESTYSPVV 472          
BLAST of NO07G04110 vs. NCBI_GenBank
Match: KUO63417.1 (hypothetical protein APF79_06505 [bacterium BRH_c32])

HSP 1 Score: 253.8 bits (647), Expect = 1.900e-63
Identity = 161/490 (32.86%), Postives = 240/490 (48.98%), Query Frame = 0
Query:   72 FVSFNIPELTFIQD--------PWRLPTRWEQTDALRSVLHQGGRVARPYTLSIEDKIVHPDPARRCHVEWDPKSQKFCLNEQYMQVLDQALDVAREMGIRLILPLIDQWTWVGGVESMARWRGFVGKDCARAFWEEDVCLQDWGEVIRAVVGRRNTINGALYREDPTILAWETGNELDCPSAWTIRMARIIKEADECRHLVIDG--HHGVDPGVLGEESIDIVSRHYYPSGDGSTADSPILSSITTCTLPPSSFVDALFSDLHACQGKKPFFVGEFGFASLSSTASFLSTLVAQAQAGQGVIGACLWSLRFRSFRGGFYFHEEPWGFNVFWAYHWPGFPSGDRYDERGMMSLLHTYGHLCFSHDSGIGQNSNSKPCVSLPSIPFSLPLPVPAPPRLLSVTAQGLLTFRGSTSARSYELHRCRDIENGGGRGERRGGGDWMVVERGVIDSWVPEQGQVLDKSLMRSPPSDFFYRLVAVNETGCSKPSGVL 552
            F+SFNIP L +I+D        PWRLP  +E  D LRS+   GG+V R Y LS++     PD  R  HVE   K      NE+  + LD  + VA E G+R+I+P +D W W GG +  A +R   GK+   AFW +   ++D  + I  ++ R+N+  G LY+ED  + AWETGNEL  P  WT  +A  IK  D   HL+++G     + P  + + ++DI+S H+Y  GD                  P   ++ + S+     GKKP+F+GE+G            T+++     QG+ G  +WSLR R   GGFY H E   +N   +Y +PGF SGD YDE+ ++ +                     +    +  +P S  LP+P  P +L +   GL++++GST A+SY L R  +  N           DW+ +E    DS    +    DK+        +FYR+ A NE+G S  S ++
Sbjct:   45 FISFNIPNLHYIEDYLPFEGTNPWRLPNEYEIRDGLRSIKQLGGKVTRIYVLSVKKDGDTPDIIR--HVEGPGK-----FNEEAFKALDLVMKVANEEGVRVIIPFVDNWHWWGGPKEYAAFR---GKE-KEAFWTDREIIEDLKKTINFLINRKNSYTGVLYKEDKALFAWETGNELAAPYEWTKEIAAYIKSLDN-NHLLVEGVIAKDITPEAIEDPNLDILSTHHY--GD------------------PKYSIEKITSNKKMIAGKKPYFIGEYGIIPTQKIREITDTIMS-----QGLAGGMIWSLRPRERSGGFYHHYE---YNNVESYRFPGFASGDWYDEKAVLEIAR-------------------EKAFQIDGLPQS-QLPIPEAPNMLEIKNVGLISWQGSTGAQSYSLERKEEYVN-----------DWVEIEANADDSKYQYRPLYNDKTAEFG--KRYFYRINAKNESGVSGYSNIV 461          
BLAST of NO07G04110 vs. NCBI_GenBank
Match: WP_065852498.1 (hypothetical protein [Paenibacillus pectinilyticus] >OCT15588.1 hypothetical protein A8709_16085 [Paenibacillus pectinilyticus])

HSP 1 Score: 252.7 bits (644), Expect = 4.300e-63
Identity = 170/487 (34.91%), Postives = 235/487 (48.25%), Query Frame = 0
Query:   70 FYFVSFNIPELTFIQDP-WRLPTRWEQTDALRSVLHQGGRVARPYTLSIEDKIVHPDPARRCHVEWDPKSQKFCLNEQYMQVLDQALDVAREMGIRLILPLIDQWTWVGGVESMARWRGFVGKDCARAFWEEDVCLQDWGEVIRAVVGRRNTINGALYREDPTILAWETGNELDCP-SAWTIRMARIIKEADECRHLVIDGHHGVDPGVLGEES-IDIVSRHYYPSGDGSTADSPILSSITTCTLPPSSFVDALFSDLHACQGKKPFFVGEFGFASLSSTASFLSTLVAQAQAGQGVIGACLWSLRFRSFRGGFYFHEE-PWGFNVFWAYHWPGFPSGDR-YDERGMMSLLHTYGHLCFSHDSGIGQNSNSKPCVSLPSIPFSLPLPVPAPPRLLSVTAQGLLTFRGSTSARSYELHRCRDIENGGGRGERRGGGDWMVVERGVIDSWVPEQGQVLDKSLMRSPPSDFFYRLVAVNETGCSKPSGVL 552
            F F+  N+P LT ++D  W++PT WEQ DA +++   G    R Y +S++    +P   R  HVE   +      NEQ    LD+AL +A E GIRLI+P +DQ+ W GG+   A +RG   KD   AFW +     D+   I  V+ R NTI    Y++DP ILAWETGNEL  P SAWT  +   IK  D   HL+IDG +G+D   L   S IDIVS HYYP+                     +SF   +  D    +GKKPF+VGEFGF   +    FL+ +V       G  GA +WSLR+ S  GGF+ H E  +G   + AY WPGFP+G++ + E  ++SLL          D        +KP            LPVP  P +L +     + ++GST A +Y + R                G W +V   V D+   +    L   +     + ++YR  A N  G S  S V+
Sbjct:   58 FRFIGANVPTLTMVEDGYWQVPTEWEQRDAFKALQQMGATATRTYVISVKKATDYPGRIR--HVEAPGQ-----FNEQAFVALDRALALANEYGIRLIIPFVDQYEWWGGIGEYAAFRG-KNKD---AFWTDTTIKNDFKATINYVLNRTNTITNVKYKDDPAILAWETGNELTPPTSAWTTEIGTYIKSQDN-NHLLIDGKYGIDASSLEASSPIDIVSNHYYPN-------------------HYASFASQVSLDREMAKGKKPFYVGEFGFIPQTELTPFLNNVVE-----NGTSGALIWSLRYHSEDGGFFRHTEGTYGGTFYEAYKWPGFPAGEQSFQESSVLSLL---------RDQAYAIRGIAKPA-----------LPVPDAPVMLPINTVSRIGWQGSTGATAYTVER-----------SVYANGPWDIVGAQVYDAAKTD----LFDDMTSVTGATYYYRTKARNTVGESTYSPVV 473          
BLAST of NO07G04110 vs. NCBI_GenBank
Match: WP_051554092.1 (hypothetical protein [Paenibacillus sp. URHA0014])

HSP 1 Score: 251.5 bits (641), Expect = 9.700e-63
Identity = 171/487 (35.11%), Postives = 233/487 (47.84%), Query Frame = 0
Query:   70 FYFVSFNIPELTFIQDP-WRLPTRWEQTDALRSVLHQGGRVARPYTLSIEDKIVHPDPARRCHVEWDPKSQKFCLNEQYMQVLDQALDVAREMGIRLILPLIDQWTWVGGVESMARWRGFVGKDCARAFWEEDVCLQDWGEVIRAVVGRRNTINGALYREDPTILAWETGNELDCPS-AWTIRMARIIKEADECRHLVIDGHHGVDPGVLGEES-IDIVSRHYYPSGDGSTADSPILSSITTCTLPPSSFVDALFSDLHACQGKKPFFVGEFGFASLSSTASFLSTLVAQAQAGQGVIGACLWSLRFRSFRGGFYFHEE-PWGFNVFWAYHWPGFPSGD-RYDERGMMSLLHTYGHLCFSHDSGIGQNSNSKPCVSLPSIPFSLPLPVPAPPRLLSVTAQGLLTFRGSTSARSYELHRCRDIENGGGRGERRGGGDWMVVERGVIDSWVPEQGQVLDKSLMRSPPSDFFYRLVAVNETGCSKPSGVL 552
            F F+  N+P LT ++D  W++PT WEQ DA +++   G    R Y LS+     +P   R  HV+   +      NE     LD+AL +A E GIRLI+P +DQ+ W GG+   A +RG  GKD    FW       D+   I  V+ R NTI    Y++D  ILAWETGNEL  PS AWT  M   IK  D   HL+IDG +G+D   L   S IDIVS HYYP+                     S+F D +  D +  +GKKPF+VGEFGF   +  A FL+ ++       G  GA +WSLR+ S  GGF+ H E  +G   + AY WPGFP+G+  ++E  +++LL          D        SKP            LPVP  P +L +     + ++GST A SY + R                G W ++   V D+   +    L         + +FYR  A N  G S  S V+
Sbjct:   56 FRFIGANVPTLTMVEDGYWQVPTEWEQRDAFKALQQMGATATRTYVLSVTKATDYPGMIR--HVQGPGQ-----FNEDAFVALDRALALANEYGIRLIIPFVDQYDWWGGIAEYAAFRG-KGKD---EFWTNSQIKDDFKATINYVLNRTNTITNVKYKDDKAILAWETGNELTPPSAAWTTEMGTYIKSID-ANHLLIDGKYGIDSSSLDVGSPIDIVSNHYYPN-------------------HYSNFADQVNVDKNMARGKKPFYVGEFGFIPKTQLAPFLNNVIE-----SGTSGALIWSLRYHSEDGGFFRHTEGTYGGTFYEAYKWPGFPAGESSFEESSVLNLL---------RDKAYEIRGISKPA-----------LPVPEAPVILPIDTISRIGWQGSTGATSYTVER-----------SVYAAGPWDIIGAQVFDAATSD----LFDDTTSVTGATYFYRTKARNTVGESTYSPVV 471          
BLAST of NO07G04110 vs. NCBI_GenBank
Match: GBE27999.1 (hypothetical protein BMS3Bbin03_01934 [bacterium BMS3Bbin03])

HSP 1 Score: 248.1 bits (632), Expect = 1.100e-61
Identity = 155/493 (31.44%), Postives = 235/493 (47.67%), Query Frame = 0
Query:   70 FYFVSFNIPELTFIQD--------PWRLPTRWEQTDALRSVLHQGGRVARPYTLSIEDKIVHPDPARRCHVEWDPKSQKFCLNEQYMQVLDQALDVAREMGIRLILPLIDQWTWVGGVESMARWRGFVGKDCARAFWEEDVCLQDWGEVIRAVVGRRNTINGALYREDPTILAWETGNELDCPSAWTIRMARIIKEADECRHLVIDGHHGVD--PGVLGEESIDIVSRHYYPSGDGSTADSPILSSITTCTLPPSSFVDALFSDLHACQ-GKKPFFVGEFGFASLSSTASFLSTLVAQAQAGQGVIGACLWSLRFRSFRGGFYFHEEPWGFNVFWAYHWPGFPSGDRYDERGMMSLLHTYGHLCFSHDSGIGQNSNSKPCVSLPSIPFSLPLPVPAPPRLLSVTAQGLLTFRGSTSARSYELHRCRDIENGGGRGERRGGGDWMVVERGVIDSWVPEQGQVLDKSLMRSPPSDFFYRLVAVNETGCSKPSGVL 552
            F F+SFNIP L F++D         + LP  +E  DAL S+   GGRV R YT+ +  +  + D  +     +     KF  NE   + LD  L  A EMGIRLI+PL++ W W+GG    A +RG    +    FW +   + D+ + I+ ++ R+NTI G  Y+ED  IL WETGNEL  P +WT  + + IK  D+  HLV+DG+HG      V+ E  +DIV+ H+Y +                    P +    +  ++   +   K + +GEFGF+        L  ++      + + G  +WSLR+    GGFY+H EP G  ++ AYHWPGF SG+ YDE+G++ L+          +         +P +S PS           PP LL +     ++++GST A  Y +               R  G W +    + D+ V       D S      S ++YR++AVN+ G S PS ++
Sbjct:   49 FRFISFNIPNLNFVEDEMAFTKIEAYGLPVEYEIRDALESIKQIGGRVVRIYTIPVRSRNENKDIPK-----YVLAPGKF--NESAFKCLDSVLAAADEMGIRLIIPLVNNWKWMGGRPQYAAFRGKKKSE----FWTDPQLINDFKKTIQYILNRKNTITGIKYKEDKAILCWETGNELTAPQSWTHEIVKYIKSIDK-NHLVMDGYHGSQLLNRVVEEPLVDIVTTHHYENN-------------------PEALFRHIDENIEKIKNSSKAYIIGEFGFSGTLVVRKLLDKVI----DNKSIAGCLIWSLRYHRKDGGFYWHSEPLGRGMYKAYHWPGFNSGNEYDEKGLLKLM---------REKAYAIQGKKRPNLSKPS-----------PPVLLPINNAARISWKGSTGASGYNV-----------ESAERKTGPWEIAGFNISDARVQYYPLFHDNSAKIG--STYYYRVIAVNKEGRSLPSNIV 473          
BLAST of NO07G04110 vs. NCBI_GenBank
Match: GBD93880.1 (hypothetical protein BMS3Abin05_01475 [bacterium BMS3Abin05])

HSP 1 Score: 246.9 bits (629), Expect = 2.400e-61
Identity = 155/493 (31.44%), Postives = 234/493 (47.46%), Query Frame = 0
Query:   70 FYFVSFNIPELTFIQD--------PWRLPTRWEQTDALRSVLHQGGRVARPYTLSIEDKIVHPDPARRCHVEWDPKSQKFCLNEQYMQVLDQALDVAREMGIRLILPLIDQWTWVGGVESMARWRGFVGKDCARAFWEEDVCLQDWGEVIRAVVGRRNTINGALYREDPTILAWETGNELDCPSAWTIRMARIIKEADECRHLVIDGHHGVD--PGVLGEESIDIVSRHYYPSGDGSTADSPILSSITTCTLPPSSFVDALFSDLHACQ-GKKPFFVGEFGFASLSSTASFLSTLVAQAQAGQGVIGACLWSLRFRSFRGGFYFHEEPWGFNVFWAYHWPGFPSGDRYDERGMMSLLHTYGHLCFSHDSGIGQNSNSKPCVSLPSIPFSLPLPVPAPPRLLSVTAQGLLTFRGSTSARSYELHRCRDIENGGGRGERRGGGDWMVVERGVIDSWVPEQGQVLDKSLMRSPPSDFFYRLVAVNETGCSKPSGVL 552
            F F+SFNIP L F++D         + LP  +E  DAL S+   GGRV R YT+ +  +  + D  +     +     KF  NE   + LD  L  A EMGIRLI+PL++ W W+GG    A +RG    +    FW +   + D+ + I+ ++ R+NTI G  Y+ED  IL WETGNEL  P +WT  + + IK  D+  HLV+DG+HG      V+ E  +DIV+ H+Y +                    P      +  ++   +   K + +GEFGF+        L  ++      + + G  +WSLR+    GGFY+H EP G  ++ AYHWPGF SG+ YDE+G++ L+          +         +P +S PS           PP LL +     ++++GST A  Y +               R  G W +    + D+ V       D S      S ++YR++AVN+ G S PS ++
Sbjct:   49 FRFISFNIPNLNFVEDEMAFTKIEAYGLPVEYEIRDALESIKQIGGRVVRIYTIPVRSRNENKDIPK-----YVLAPGKF--NESAFKCLDSVLAAADEMGIRLIIPLVNNWKWMGGRPQYAAFRGKKKSE----FWTDPQLISDFKKTIQYILNRKNTITGIKYKEDKAILCWETGNELTAPQSWTHEIVKYIKSIDK-NHLVMDGYHGSQLLNRVVEEPLVDIVTTHHYENN-------------------PEVLFRHIDENIEKIKNSSKAYIIGEFGFSGTLVVRKLLDKVI----DNKSIAGCLIWSLRYHRKDGGFYWHSEPLGRGMYKAYHWPGFNSGNEYDEKGLLKLM---------REKAYAIQGKKRPNLSKPS-----------PPVLLPINNAARISWKGSTGASGYNV-----------ESAERKTGPWEIAGFNISDARVQYYPLFHDNSAKIG--STYYYRVIAVNKEGRSLPSNIV 473          
The following BLAST results are available for this feature:
BLAST of NO07G04110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_012772681.16.700e-7236.91S-layer protein [Paenibacillus sp. JDR-2] >ACS9935... [more]
WP_091188239.17.600e-6835.95hypothetical protein [Paenibacillus catalpae] >SFE... [more]
WP_091223795.11.300e-6735.31hypothetical protein [Paenibacillus sp. BC26] >SFT... [more]
WP_090983281.12.900e-6735.89hypothetical protein [Paenibacillus sp. CF384] >SD... [more]
WP_056613140.12.100e-6535.11hypothetical protein [Paenibacillus sp. Soil750] >... [more]
KUO63417.11.900e-6332.86hypothetical protein APF79_06505 [bacterium BRH_c3... [more]
WP_065852498.14.300e-6334.91hypothetical protein [Paenibacillus pectinilyticus... [more]
WP_051554092.19.700e-6335.11hypothetical protein [Paenibacillus sp. URHA0014][more]
GBE27999.11.100e-6131.44hypothetical protein BMS3Bbin03_01934 [bacterium B... [more]
GBD93880.12.400e-6131.44hypothetical protein BMS3Abin05_01475 [bacterium B... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04110.1NO07G04110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|637619gene_2758Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04110.1NO07G04110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04110 ID=NO07G04110|Name=NO07G04110|organism=Nannochloropsis oceanica|type=gene|length=2691bp
ATGGCTGCGCCTCCACCCCTCCCGTTCATCAAACGCCGCGGGCTGGTACT
CTATGAAGATGATAATGCCGTCGCCACGACAAGCACAGCATCAGCCTCCA
CGAATTCTTCCCGCTCGCTGCTTCCGGGAAGCGACGACAGCCCTCCCAGC
ACAAGCACGGATCGAGCCCTCGCACCCACCTGTACCATACCACCGATGAT
CTATCCGTTCTACTTTGTATCCTTCAATATTCCCGAGCTAACCTTTATCC
AAGACCCCTGGCGGCTCCCCACCCGGTGGGAGCAGACAGACGCTTTGCGC
TCAGTTCTCCACCAAGGGGGGCGGGTGGCGCGGCCCTATACCTTGTCCAT
TGAAGACAAGATCGTCCATCCTGACCCTGCTCGACGATGTCACGTAGAAT
GGGATCCGAAGTCTCAGAAATTCTGTCTCAACGAGCAGTACATGCAAGTC
TTGGACCAGGCCTTGGACGTGGCAAGAGAAATGGGTATTCGATTAATCCT
TCCGCTTATCGACCAGTGGACATGGGTGGGTGGAGTGGAAAGTATGGCGA
GATGGCGTGGGTTTGTAGGCAAGGACTGCGCAAGGGCTTTTTGGGAGGAA
GATGTGTGCTTGCAAGATTGGGGCGAGGTGATCAGGGCGGTGGTGGGGAG
GAGGAATACAATAAATGGTGCATTGTACCGGGAGGACCCCACCATCCTCG
CGTGGGAAACGGGAAATGAATTGGACTGTCCCTCTGCATGGACGATTCGC
ATGGCGAGGATCATCAAGGAGGCGGATGAATGCAGACATTTGGTGATTGA
TGGCCACCACGGCGTAGACCCGGGCGTGCTGGGCGAGGAATCGATTGACA
TTGTCTCCCGTCATTATTATCCTTCGGGTGATGGGAGCACTGCTGACTCC
CCCATCCTCTCTTCCATCACCACATGCACCCTCCCTCCCTCATCCTTCGT
AGATGCCCTCTTCTCTGATCTCCACGCGTGCCAGGGCAAGAAGCCTTTCT
TCGTGGGTGAGTTTGGATTCGCCTCTCTCTCGTCCACGGCCTCTTTCCTC
TCCACCCTCGTTGCTCAAGCCCAAGCTGGACAAGGCGTCATTGGTGCCTG
CCTCTGGAGCCTTCGCTTCCGATCTTTTCGCGGTGGCTTCTACTTTCACG
AAGAGCCCTGGGGTTTCAATGTCTTTTGGGCCTACCACTGGCCCGGCTTT
CCTTCCGGCGACCGCTACGACGAAAGAGGGATGATGTCACTGCTGCACAC
CTACGGCCATCTCTGCTTCTCCCATGACAGCGGCATAGGGCAAAATAGCA
ACAGCAAACCCTGTGTCTCTTTGCCTTCCATCCCTTTCTCACTTCCTCTT
CCCGTGCCTGCCCCACCACGTCTTTTGTCTGTGACAGCCCAAGGCCTTCT
CACCTTCCGGGGATCCACCAGCGCCCGTAGCTACGAGTTACATCGCTGTC
GCGATATAGAGAACGGAGGAGGAAGGGGGGAAAGACGGGGAGGGGGGGAC
TGGATGGTGGTGGAAAGAGGGGTGATAGATTCTTGGGTTCCGGAGCAAGG
GCAGGTGTTGGACAAGAGCTTAATGCGCTCCCCGCCGTCAGATTTCTTTT
ATCGCCTAGTGGCCGTGAATGAAACAGGGTGCTCCAAGCCTTCGGGTGTG
TTGCCGTTGCAGCTCCCGAGGGTAGGAGAGGGGGCAACACTGGCTCCTAC
GGTGTATTACTTTATCGAAGAAACATCGCAGCATGTCATGCTGGTGGGAC
GACGCAATGTACTACCTCCTTCGCTTTTATGGGGATCGGAGCATGGGGAG
GGTGAGGGGAAGGGGGAAGGAGGGGAGGAAGGCTGGTTGACGCGTGATTT
GACGAAATGTATGGGGTTTCCCCGCGCGGCTGAGGGAGGAAGGGTGTGCG
CGCTGGGTCCGGAAGAAGAGGGGTGGCTGGTGTATGGAGGGTGGGACGGG
CACTTGGTCGAGGCGGACATTCAGAGCCGACGTGTCGTTAATCACCCACT
CATTATTCGGGGTTCCCCCACTGTGTGGCGGGCGCCGACCTCAAAGGCAA
GTCCTGACTCACTTGCTCGGGCCTGGGTGCGAGACGCGGAGATGGACAGG
CTGTTAATGTTGTCCTTTGACATCGTGCGCGAGAAAAACACCTTAAAAGT
AGAGGATGTCGCGTTCGACGGTCCAGAACTGCCAAGATTGGGCGGCGACC
CTGTGGCGGTGAGTGCCAGAGAGGTTTGCTATGTGGGACATGACCAACGC
TTATACCGAATAATGTTTTCGTTCGATGAGTCCTATTCACAAGAGAAGGA
AGGGAGGGGGGGAGATAAAAGGGTGTCGTTCAAGTACACATTGGTTGACC
ACTCGGTCCGGTCGGGGATTCATGTTCGGAGGGGAGATGAGTTGCAGATT
TTGGGCTGTCAAAAAGTGATATATGTCAGTGCGGAGGGAAAGGGGCACAT
AATTGAGGAATCGAGGGCGGATGGGACGAGCGAGGAGGCGTGGCTTGTGA
CGGATCACACGGTACTACATGGGGCGTCGCCACCAGTGGTGGGGAGTGTC
CGGGTGTTTCCACACCCCGTGGTCCAGGTGTCGTTTCAGAGTGCAGCCGA
CCGGCATTGGTATGAGTTATGGTGGGCGGGAGAGAGCTGGCGGGTCAGTC
GGGAGGTGGGTGGTGATGAGGTGGTAAAGCCTTGTCGTTAA
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protein sequence of NO07G04110.1

>NO07G04110.1-protein ID=NO07G04110.1-protein|Name=NO07G04110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=897bp
MAAPPPLPFIKRRGLVLYEDDNAVATTSTASASTNSSRSLLPGSDDSPPS
TSTDRALAPTCTIPPMIYPFYFVSFNIPELTFIQDPWRLPTRWEQTDALR
SVLHQGGRVARPYTLSIEDKIVHPDPARRCHVEWDPKSQKFCLNEQYMQV
LDQALDVAREMGIRLILPLIDQWTWVGGVESMARWRGFVGKDCARAFWEE
DVCLQDWGEVIRAVVGRRNTINGALYREDPTILAWETGNELDCPSAWTIR
MARIIKEADECRHLVIDGHHGVDPGVLGEESIDIVSRHYYPSGDGSTADS
PILSSITTCTLPPSSFVDALFSDLHACQGKKPFFVGEFGFASLSSTASFL
STLVAQAQAGQGVIGACLWSLRFRSFRGGFYFHEEPWGFNVFWAYHWPGF
PSGDRYDERGMMSLLHTYGHLCFSHDSGIGQNSNSKPCVSLPSIPFSLPL
PVPAPPRLLSVTAQGLLTFRGSTSARSYELHRCRDIENGGGRGERRGGGD
WMVVERGVIDSWVPEQGQVLDKSLMRSPPSDFFYRLVAVNETGCSKPSGV
LPLQLPRVGEGATLAPTVYYFIEETSQHVMLVGRRNVLPPSLLWGSEHGE
GEGKGEGGEEGWLTRDLTKCMGFPRAAEGGRVCALGPEEEGWLVYGGWDG
HLVEADIQSRRVVNHPLIIRGSPTVWRAPTSKASPDSLARAWVRDAEMDR
LLMLSFDIVREKNTLKVEDVAFDGPELPRLGGDPVAVSAREVCYVGHDQR
LYRIMFSFDESYSQEKEGRGGDKRVSFKYTLVDHSVRSGIHVRRGDELQI
LGCQKVIYVSAEGKGHIIEESRADGTSEEAWLVTDHTVLHGASPPVVGSV
RVFPHPVVQVSFQSAADRHWYELWWAGESWRVSREVGGDEVVKPCR*
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Synonyms
Publications