NO07G03770, NO07G03770 (gene) Nannochloropsis oceanica

Overview
NameNO07G03770
Unique NameNO07G03770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2430
Alignment locationchr7:1054867..1057296 +

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Properties
Property NameValue
DescriptionPolyketide cyclase / dehydrase and lipid transport protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1054867..1057296 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005031Polyket_cyc
Homology
[Close]
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_023523519.1 (coenzyme Q-binding protein COQ10 homolog, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 106.7 bits (265), Expect = 1.100e-19
Identity = 54/154 (35.06%), Postives = 86/154 (55.84%), Query Frame = 0 
Query:   79 RVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYGEGI 233
            RV+ ++ EQLFDVV  VD Y+ F+P+C +S+V++  P     A+L +GF   L E YTS + ++RPKS+      S +F  L + W+FQPGP                ++ F V F+  +PL +    + F ++V + + +F DRC  +YG G+
Sbjct:  135 RVMGYSPEQLFDVVAAVDSYQDFVPWCQRSEVIKTYPDGSFDAELEIGF-KFLVESYTSHVEIQRPKSVKTTVSQSTLFDHLINIWEFQPGPV-----------PGTCNLYFLVDFKFQSPLYRQVASVFFKEVVSKLVGSFNDRCRLIYGPGV 276
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BLAST of NO07G03770 vs. NCBI_GenBank
Match: OQR93929.1 (hypothetical protein ACHHYP_02087 [Achlya hypogyna])

HSP 1 Score: 105.9 bits (263), Expect = 1.900e-19
Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 0 
Query:   75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDR 224
            H   R+VP++C +++DVV DVD Y  FLP+C  S+V+RR   N + A L VGF  +  E Y SR+ +  P  I I +++S  F  +ES W F+     + E            +DFRV FEV++ L   A+ L F D+   Q++AF  R
Sbjct:   36 HTEKRIVPYSCREMYDVVADVDSYAAFLPFCVSSRVVRRPNDNVMEADLTVGF-QIFTETYRSRVLMHAPHKIHIKSIESPTFKSIESEWNFREVTPTSCE------------IDFRVSFEVASILHSQAMRLFFDDVARTQLNAFIGR 171
[Close]
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_022940326.1 (coenzyme Q-binding protein COQ10 homolog, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 105.9 bits (263), Expect = 1.900e-19
Identity = 54/154 (35.06%), Postives = 86/154 (55.84%), Query Frame = 0 
Query:   79 RVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYGEGI 233
            RV+ ++ EQLFDVV  VD Y+ F+P+C +S+V++  P     A+L +GF   L E YTS + ++RPKS+      S +F  L + W+FQPGP                ++ F V F+  +PL +    + F ++V + + +F DRC  +YG G+
Sbjct:  135 RVMGYSPEQLFDVVAAVDLYQDFVPWCQRSEVIKTYPDGSFDAELEIGF-KFLVESYTSHVEIQRPKSVKTTVSQSTLFDHLINIWEFQPGPV-----------PGTCNLYFLVDFKFQSPLYRQVASVFFKEVVSKLVGSFNDRCRLIYGPGV 276
[Close]
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_008611845.1 (hypothetical protein SDRG_07769 [Saprolegnia diclina VS20] >EQC34973.1 hypothetical protein SDRG_07769 [Saprolegnia diclina VS20])

HSP 1 Score: 105.5 bits (262), Expect = 2.400e-19
Identity = 57/149 (38.26%), Postives = 83/149 (55.70%), Query Frame = 0 
Query:   75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDR 224
            H   RVVPF+C +++DVV +VD Y  FLP+C  S+V+RR   N + A L VGF  +  E Y SR+ +  P  I+I +++S  F  +ES W F+     + E            V+FRV FEV++ L   A+ L F D+   Q++AF  R
Sbjct:   40 HTEKRVVPFSCREMYDVVANVDAYASFLPFCVSSRVVRRPNDNVMEADLTVGF-QIFTETYRSRVLMHAPHKILITSIESPTFKSIESEWNFREVSPTSCE------------VNFRVTFEVASILHSQALRLFFDDVARTQLNAFIGR 175
[Close]
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_008867940.1 (hypothetical protein H310_05092 [Aphanomyces invadans] >ETW03711.1 hypothetical protein H310_05092 [Aphanomyces invadans])

HSP 1 Score: 105.5 bits (262), Expect = 2.400e-19
Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 0 
Query:   74 EHRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAF 221
            EHR  ++VPFTC+ +FDVV +VD Y  FLP+C  S+V+ R   N + A L VGF  +  E Y SR+ +E P  I I ++ S  F  +ES W F+     + E            V+FRV FEV + L   A+ L F D+   Q++AF
Sbjct:   39 EHREKKIVPFTCQAMFDVVANVDAYVSFLPFCVSSRVVSRPSTNVMEADLTVGF-QIFTESYRSRVELESPHRIFIKSIHSPTFKSIESEWMFRQVSETSCE------------VNFRVSFEVGSILHAHAMRLFFDDVARVQLNAF 172
[Close]
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_008867941.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETW03712.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 105.5 bits (262), Expect = 2.400e-19
Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 0 
Query:   74 EHRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAF 221
            EHR  ++VPFTC+ +FDVV +VD Y  FLP+C  S+V+ R   N + A L VGF  +  E Y SR+ +E P  I I ++ S  F  +ES W F+     + E            V+FRV FEV + L   A+ L F D+   Q++AF
Sbjct:   39 EHREKKIVPFTCQAMFDVVANVDAYVSFLPFCVSSRVVSRPSTNVMEADLTVGF-QIFTESYRSRVELESPHRIFIKSIHSPTFKSIESEWMFRQVSETSCE------------VNFRVSFEVGSILHAHAMRLFFDDVARVQLNAF 172
[Close]
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_008867942.1 (hypothetical protein, variant 2 [Aphanomyces invadans] >ETW03713.1 hypothetical protein, variant 2 [Aphanomyces invadans])

HSP 1 Score: 105.5 bits (262), Expect = 2.400e-19
Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 0 
Query:   74 EHRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAF 221
            EHR  ++VPFTC+ +FDVV +VD Y  FLP+C  S+V+ R   N + A L VGF  +  E Y SR+ +E P  I I ++ S  F  +ES W F+     + E            V+FRV FEV + L   A+ L F D+   Q++AF
Sbjct:   39 EHREKKIVPFTCQAMFDVVANVDAYVSFLPFCVSSRVVSRPSTNVMEADLTVGF-QIFTESYRSRVELESPHRIFIKSIHSPTFKSIESEWMFRQVSETSCE------------VNFRVSFEVGSILHAHAMRLFFDDVARVQLNAF 172
[Close]
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_012212908.1 (hypothetical protein SPRG_18089, partial [Saprolegnia parasitica CBS 223.65] >KDO16383.1 hypothetical protein SPRG_18089, partial [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 105.5 bits (262), Expect = 2.400e-19
Identity = 57/149 (38.26%), Postives = 83/149 (55.70%), Query Frame = 0 
Query:   75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDR 224
            H   RVVPF+C +++DVV +VD Y  FLP+C  S+V+RR   N + A L VGF  +  E Y SR+ +  P  I+I +++S  F  +ES W F+     + E            V+FRV FEV++ L   A+ L F D+   Q++AF  R
Sbjct:   40 HTEKRVVPFSCREMYDVVANVDAYASFLPFCVSSRVVRRPNDNVMEADLTVGF-QIFTETYRSRVLMHAPHKILITSIESPTFKSIESEWSFREVSPTSCE------------VNFRVTFEVASILHSQALRLFFDDVARTQLNAFIGR 175
[Close]
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_012194177.1 (hypothetical protein SPRG_00561 [Saprolegnia parasitica CBS 223.65] >KDO34498.1 hypothetical protein SPRG_00561 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 105.5 bits (262), Expect = 2.400e-19
Identity = 57/149 (38.26%), Postives = 83/149 (55.70%), Query Frame = 0 
Query:   75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDR 224
            H   RVVPF+C +++DVV +VD Y  FLP+C  S+V+RR   N + A L VGF  +  E Y SR+ +  P  I+I +++S  F  +ES W F+     + E            V+FRV FEV++ L   A+ L F D+   Q++AF  R
Sbjct:   40 HTEKRVVPFSCREMYDVVANVDAYASFLPFCVSSRVVRRPNDNVMEADLTVGF-QIFTETYRSRVLMHAPHKILITSIESPTFKSIESEWSFREVSPTSCE------------VNFRVTFEVASILHSQALRLFFDDVARTQLNAFIGR 175
[Close]
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_018852228.1 (PREDICTED: coenzyme Q-binding protein COQ10 homolog, mitochondrial-like, partial [Juglans regia])

HSP 1 Score: 105.5 bits (262), Expect = 2.400e-19
Identity = 59/162 (36.42%), Postives = 87/162 (53.70%), Query Frame = 0 
Query:   71 KTAEHRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYGEGI 233
            K  E R+  V+ ++ EQLFDVV  VD Y  F+P+C QS++L++ P     A+L +GF   L E Y S + + RPKSI   A DS IF  L + W+F PGP                ++ F V F+  +PL +    + F ++V + + +F  RC  VYG G+
Sbjct:  132 KVYEERI--VLGYSPEQLFDVVAAVDLYNGFVPWCRQSEILKQHPDGSFDAELEIGF-KFLVESYISHVELSRPKSIKTTAKDSAIFDHLINIWEFNPGPV-----------PGTCNLHFLVDFKFQSPLYRQVASMFFKEVVSQLVRSFSQRCSLVYGPGV 279
The following BLAST results are available for this feature:
BLAST of NO07G03770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_023523519.11.100e-1935.06coenzyme Q-binding protein COQ10 homolog, mitochon... [more]
OQR93929.11.900e-1937.58hypothetical protein ACHHYP_02087 [Achlya hypogyna... [more]
XP_022940326.11.900e-1935.06coenzyme Q-binding protein COQ10 homolog, mitochon... [more]
XP_008611845.12.400e-1938.26hypothetical protein SDRG_07769 [Saprolegnia dicli... [more]
XP_008867940.12.400e-1939.46hypothetical protein H310_05092 [Aphanomyces invad... [more]
XP_008867941.12.400e-1939.46hypothetical protein, variant 1 [Aphanomyces invad... [more]
XP_008867942.12.400e-1939.46hypothetical protein, variant 2 [Aphanomyces invad... [more]
XP_012212908.12.400e-1938.26hypothetical protein SPRG_18089, partial [Saproleg... [more]
XP_012194177.12.400e-1938.26hypothetical protein SPRG_00561 [Saprolegnia paras... [more]
XP_018852228.12.400e-1936.42PREDICTED: coenzyme Q-binding protein COQ10 homolo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03770.1NO07G03770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03770.1NO07G03770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03770 ID=NO07G03770|Name=NO07G03770|organism=Nannochloropsis oceanica|type=gene|length=2430bp
CAGGCGAGCAGACATAAGTCTTCCCTATGGCCTTCCTGGTACGCGGTGGT
AGGGAACGCCTGGTGTCCTGGGTCACACGCAGCAGTCCTCGCCTCCCCTT
CCTCCCTCACAGCTGTCGACCTCCCGTCCCCCTGCCCTCGCCATACCCAT
GTTGCAGCCACTACTACCACCGCCAGCTGCGACCCGCCAGCACCAGCAGT
GTGAGCCAAAACTCCACCACTATAAAAAGGGAGGGGAAGACGGCCGAGCA
CCGCGTCACACGTGTCGTTCCCTTCACATGCGAACAGCTCTTTGgtaagc
cttccaatgcgcgggagggttgcaacggatgtagtaccaccagctatacc
aacgccacccaaatgtatgcatcactgacaaacttctttctcatttattt
cattttcaatagATGTTGTGGTCGACGTGGACAAGTACAAGCTCTTCCTC
CCCTATTGCACCCAGTCTAAAGTCTTGCGGCGGATCCCTCCCAATTTCAT
TCTGgtacgtctctccctttcgcttgaatattcgcgcgggagacaagaaa
tgctgtaaattttttgatacgtgacttacctgggaattcatcgatcagct
ccgagcactgcctcaccctccttccctcccccatctccaccctcagGCCC
AACTCCTCGTCGGCTTCAACAATGTCCTCAATGAGCGCTACACCTCCCGA
ATTCGTGTCGAACGTCCCAAATCCATTGTCATCGCGGCCTTAGATAGCCA
TATATTTACACGCTTGGAAAGCACGTGGCAGTTTCAGCCGGGCCCTGCCT
TCGCGGCAGAAATGAGCAGCAGCAGCAGCAGCAGCAGCAGCACCCATGTC
GATTTCAGAGTCAGATTCGAGGTGTCAAATCCATTGACGCAGGCGGCAAT
CGACTTAATCTTCGCTGATTTGGTCGAGAGGCAGATACACGCATTCGAAG
ACAGATGTTTTGCAGTGTATGGGGAAGGGATTGAGGGAGGGAAGATGAGG
AAGAAGATAGGAGAGGAAGAAAAAGAGGCAAGTGCAAGTGACCTTAAACG
ATAAAAATAAAATAACTAAGTTCAATCGAATGGCGCCAAATGCGATTTTT
CCTCTTTCTCGTGATAGCTTTCTCATGTACACACCAGTCGCTCCTTGTCT
CCCATACATCCTCCCTCCCTCCCACTCGCCGCAACCCCCCTTCCTTCCCT
CCCTTTGCCCTCACAATTCCTCCTTCTCTCCCTCCTTCATCGTCCCCACG
CTTCGTTCCTCCATGAACTCAAGCGCATTCCCATCCGGATCCCGGCAAAA
CACGGCCCGTCTGCCTGACTTACTCATGGTGTAAGGTACCCCCCCCTCGG
TCAATCTCTCTAGCAGCGGCTCGATATTTTCGACAGTAAAAGCGACGTGT
CTATCCCTCCCCCCATGCTCGGGACGCCCACGTGTCGGGTCTGGGTTAGG
CAGCTCCATGAGATGAATTTGTTGAGCACCGCCGCGGACGAAGGCCCCGG
GAAATGGGAGGGTGGATGGACGCATGTGGGTGTCGTCCTCGAAGCCGAGG
GTGCGGAGGTAGAAATTCTTTGAGGACATGTTAAGAGGTGGGACCGAAGG
TGAAGAAAGTAAGATGGGGGTCATGGCATAAAAAAGTCTATCTCCTGGAA
GTCGAGTCATCCATGGTTATTATCATCACTACCATCCCTCCCCAGTCGAC
ATAAACTTCGTCGTTGTGGCAGAAGCGGGGCCTACACAGAAAACGTACCA
GCGACGCTTGGGTATCCGAAACTAGGATCCCAGCATGAGCAATGCCGCCA
AAGGTGGGCTTGGGTGTCTTGAGGGCAATAACCAGGACAAAGCCGTGCGT
CGAAGCGAGCACCATAGATAAGGCGGCGGCCAAGCACAAGGGGGAAAAGC
AGGACTGGCGGCGACGTGTGGCCATGATAAATTGATTTGAGCAGACTCTA
GACGAATTGCGGCAGGAGAAGAAAAACGGGGGTGTTGGTCTGTGGCGTGT
ATGTAGTAGTGTCGCTTGCTTGAGCGCATGACATGTCGAAGACCAAGCGA
CGCAAAGAGGGTCGCGCCCACCCACGCTTCTGTTACAGGATCTACAACCA
AAGTATTAAAGCATTCGAGACTGCGCCAAGCCTGGCCACAAAGAGGTATG
TGCGAACGAGGGAGAACCTTTGTGTGCGTGCAAAAGCAAAAAAAGTCTCG
GGGTTGGTTGGGCTTCGCCAAACAGATTTCTAACGGGCGGGCGGATATGT
GGGCCTTGCATTACCTCGTATTACCGGTACGTAATGATGAAATCCCGCAC
CTAAAGGGGGCGTCTAAGTAGGAGAGTGCTAAAATGGAGAAAGCTGGAGG
AAGGAAAGGGAAGGGAAACCAATGAATAAGAGTTATTGCTGGAGACAACC
CATACTGATAAAGATCGAAGGAGAATCCTG
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protein sequence of NO07G03770.1

>NO07G03770.1-protein ID=NO07G03770.1-protein|Name=NO07G03770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=256bp
MAFLVRGGRERLVSWVTRSSPRLPFLPHSCRPPVPLPSPYPCCSHYYHRQ
LRPASTSSVSQNSTTIKREGKTAEHRVTRVVPFTCEQLFDVVVDVDKYKL
FLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIA
ALDSHIFTRLESTWQFQPGPAFAAEMSSSSSSSSSTHVDFRVRFEVSNPL
TQAAIDLIFADLVERQIHAFEDRCFAVYGEGIEGGKMRKKIGEEEKEASA
SDLKR*
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Synonyms
Publications