NO07G03770, NO07G03770 (gene) Nannochloropsis oceanica

Overview
NameNO07G03770
Unique NameNO07G03770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2430
Alignment locationchr7:1054867..1057296 +

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Properties
Property NameValue
DescriptionPolyketide cyclase / dehydrase and lipid transport protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1054867..1057296 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005031Polyket_cyc
Homology
BLAST of NO07G03770 vs. NCBI_GenBank
Match: EWM26990.1 (START-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 201.1 bits (510), Expect = 4.300e-48
Identity = 104/166 (62.65%), Postives = 119/166 (71.69%), Query Frame = 0
Query:   90 DVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQP-----------GPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYGEGIEGGKMRKKIGEE 245
            DVV DVD YK FLPYCTQS VLRR+PPNF+LAQL+VGFNN+L E+YTSR+R++RP+SI IAALDS IFTRLESTW FQP           G A               HVDFR+RF+VSN L Q AID++F DLVERQIHAFEDRC AVYG G   GK  ++ GEE
Sbjct:   19 DVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTA-GGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSG--AGKGGREDGEE 181          
BLAST of NO07G03770 vs. NCBI_GenBank
Match: OWZ24364.1 (hypothetical protein PHMEG_000599 [Phytophthora megakarya])

HSP 1 Score: 131.0 bits (328), Expect = 5.400e-27
Identity = 71/157 (45.22%), Postives = 93/157 (59.24%), Query Frame = 0
Query:   75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYGEG 232
            H  TRVVPF+C ++FDVV DVD+Y  FLP+C +S+VLRR   N + A L VGF N+  E YTSR+ + RP  I + A+DS  F R+ES W F+P     +             +DF+V FEVS+ L   AI L F D+   Q++AF  R   VYG G
Sbjct:   36 HTETRVVPFSCSEMFDVVADVDRYSEFLPFCVESRVLRRPNDNVMEAALRVGF-NIFTESYTSRVLMIRPNKIAVKAIDSPTFKRIESEWIFKPYTTSGS-----------CKIDFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKVYGTG 180          
BLAST of NO07G03770 vs. NCBI_GenBank
Match: ETI34580.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETL81600.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM34812.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETP32610.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 121.3 bits (303), Expect = 4.300e-24
Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 0
Query:   75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYG 230
            H  TRVVPF+C ++FDVV DV +Y  FLP+C +S+VLRR   N + A L VGF  +  E YTSR+ + RP  I   A+DS  F R+ES W F+P                   VDF+V FEVS+ L   AI L F D+   Q++AF  R   +YG
Sbjct:   41 HTETRVVPFSCAEMFDVVADVQRYSEFLPFCVESRVLRRPNENVMEAALRVGF-KLFTESYTSRVLMIRPNKIATKAIDSPTFKRIESEWVFKP-----------CSTPGSCEVDFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKMYG 183          
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_008896774.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETN17190.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO63390.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976])

HSP 1 Score: 121.3 bits (303), Expect = 4.300e-24
Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 0
Query:   75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYG 230
            H  TRVVPF+C ++FDVV DV +Y  FLP+C +S+VLRR   N + A L VGF  +  E YTSR+ + RP  I   A+DS  F R+ES W F+P                   VDF+V FEVS+ L   AI L F D+   Q++AF  R   +YG
Sbjct:   41 HTETRVVPFSCAEMFDVVADVQRYSEFLPFCVESRVLRRPNENVMEAALRVGF-KLFTESYTSRVLMIRPNKIATKAIDSPTFKRIESEWVFKP-----------CSTPGSCEVDFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKMYG 183          
BLAST of NO07G03770 vs. NCBI_GenBank
Match: GAX98891.1 (Hypothetical protein PINS_006754 [Pythium insidiosum])

HSP 1 Score: 120.2 bits (300), Expect = 9.600e-24
Identity = 67/149 (44.97%), Postives = 90/149 (60.40%), Query Frame = 0
Query:   75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDR 224
            HR T+VVPF+ E+++DVV DVDKY  FLP+C  S+VLRR   N + A L +GF  V  E YTSR+ ++RP+ IVI +++S  F R+ES W F+  P                 VDFRV FEV++ L   AI L F D+   Q++AF  R
Sbjct:   64 HRETKVVPFSPEEMYDVVADVDKYHEFLPFCVDSRVLRRPNDNVMEAVLRIGF-KVFTEAYTSRVIMKRPEKIVIRSIESPTFKRIESEWHFRRLPT-----------PNTCEVDFRVTFEVASFLHANAIQLFFDDVAVTQLNAFIGR 200          
BLAST of NO07G03770 vs. NCBI_GenBank
Match: CCA25311.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 112.5 bits (280), Expect = 2.000e-21
Identity = 65/166 (39.16%), Postives = 91/166 (54.82%), Query Frame = 0
Query:   75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYGEGIEGGKMRKK 241
            H  ++VVPF+  ++FDVV DV+ YK FLP+C +S+VLR+   N + A L +GF  +  E YTSR+ + RP  I I +L+S  F R+ES WQF+                    V FRV FEV++ L   AI L F D+   Q++AF  R    Y    E  + RK+
Sbjct:   50 HSESKVVPFSANEMFDVVADVNSYKEFLPFCVESRVLRKPNENVMEAMLRIGF-KIFTEAYTSRVIMNRPHKINIKSLESPTFKRIESEWQFK-----------QLENPYSCQVQFRVVFEVASFLHANAIKLFFEDVARTQLNAFIGRAGWKYNANHERNENRKR 203          
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_005648813.1 (hypothetical protein COCSUDRAFT_28720 [Coccomyxa subellipsoidea C-169] >EIE24269.1 hypothetical protein COCSUDRAFT_28720 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 110.5 bits (275), Expect = 7.600e-21
Identity = 57/161 (35.40%), Postives = 96/161 (59.63%), Query Frame = 0
Query:   70 GKTAEH-RVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYG 230
            G T++H +  R++ ++ +QL+DVV  V+ YK F+P+C +S++++  PP+F+ A+L VGF  +  ERYTS++ + RP  +V    DS +F  L+STW+F+PGP   +             + F V F   +PL +    + F ++V+  + AFE RC  +YG
Sbjct:  127 GDTSKHYQERRLIGYSPKQLYDVVAAVEHYKEFVPWCQRSEIIQERPPDFVEAELEVGF-KLFVERYTSQVHLHRPGKVVSHVYDSTLFDHLDSTWEFKPGPTPGSTW-----------LFFSVDFAFKSPLYRHIASVFFDEVVKHMMGAFEGRCKHLYG 275          
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_009837818.1 (hypothetical protein H257_12351 [Aphanomyces astaci] >XP_009837819.1 hypothetical protein, variant 1 [Aphanomyces astaci] >ETV72590.1 hypothetical protein H257_12351 [Aphanomyces astaci] >ETV72591.1 hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 108.6 bits (270), Expect = 2.900e-20
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 0
Query:   74 EHRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAF 221
            EHR  +VVPF C+ +FDVV +VD+Y  FLP+C  S+V+ R   N + A L VGF  +  E Y SR+ +E P+ I+I +++S  F  +ES W F+P    + E            V+FRV FEV + L   A+ L F D+   Q++AF
Sbjct:   38 EHREKKVVPFPCQAMFDVVANVDEYVTFLPFCVTSRVVSRPSSNSMEADLTVGF-QIFTETYRSRVVLESPRRILIKSINSPTFKSIESEWTFRPVSTTSCE------------VNFRVSFEVGSILHAHAMRLFFDDVARVQLNAF 171          
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_009837820.1 (hypothetical protein, variant 2 [Aphanomyces astaci] >ETV72592.1 hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 108.6 bits (270), Expect = 2.900e-20
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 0
Query:   74 EHRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAF 221
            EHR  +VVPF C+ +FDVV +VD+Y  FLP+C  S+V+ R   N + A L VGF  +  E Y SR+ +E P+ I+I +++S  F  +ES W F+P    + E            V+FRV FEV + L   A+ L F D+   Q++AF
Sbjct:   38 EHREKKVVPFPCQAMFDVVANVDEYVTFLPFCVTSRVVSRPSSNSMEADLTVGF-QIFTETYRSRVVLESPRRILIKSINSPTFKSIESEWTFRPVSTTSCE------------VNFRVSFEVGSILHAHAMRLFFDDVARVQLNAF 171          
BLAST of NO07G03770 vs. NCBI_GenBank
Match: CCI49232.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 108.6 bits (270), Expect = 2.900e-20
Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = 0
Query:   75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYGEGIEGGKMRKK 241
            H  T+VVPF+ +++FDVV DV+ YK FLP+C +S++LR+   N + A L +GF  +  E YTSR+ + RP  I I +++S  F R+ES W+F+                    V FRV FEV++ L   AI L F D+   Q++AF  R    Y    E  + +++
Sbjct:   57 HSETKVVPFSADEMFDVVADVNSYKEFLPFCVESRILRKPNENVMEAMLRIGF-KIFTEAYTSRVIMNRPHKINIKSVESPTFKRIESEWRFK-----------QLDDPYSCQVHFRVVFEVASFLHANAIKLFFEDVARTQLNAFIGRAGWKYNNDHERNEEKQR 210          
The following BLAST results are available for this feature:
BLAST of NO07G03770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26990.14.300e-4862.65START-like domain protein [Nannochloropsis gaditan... [more]
OWZ24364.15.400e-2745.22hypothetical protein PHMEG_000599 [Phytophthora me... [more]
ETI34580.14.300e-2443.87hypothetical protein, variant 1 [Phytophthora para... [more]
XP_008896774.14.300e-2443.87hypothetical protein, variant 1 [Phytophthora para... [more]
GAX98891.19.600e-2444.97Hypothetical protein PINS_006754 [Pythium insidios... [more]
CCA25311.12.000e-2139.16conserved hypothetical protein [Albugo laibachii N... [more]
XP_005648813.17.600e-2135.40hypothetical protein COCSUDRAFT_28720 [Coccomyxa s... [more]
XP_009837818.12.900e-2040.14hypothetical protein H257_12351 [Aphanomyces astac... [more]
XP_009837820.12.900e-2040.14hypothetical protein, variant 2 [Aphanomyces astac... [more]
CCI49232.12.900e-2036.75unnamed protein product [Albugo candida][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03770.1NO07G03770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03770.1NO07G03770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03770 ID=NO07G03770|Name=NO07G03770|organism=Nannochloropsis oceanica|type=gene|length=2430bp
CAGGCGAGCAGACATAAGTCTTCCCTATGGCCTTCCTGGTACGCGGTGGT
AGGGAACGCCTGGTGTCCTGGGTCACACGCAGCAGTCCTCGCCTCCCCTT
CCTCCCTCACAGCTGTCGACCTCCCGTCCCCCTGCCCTCGCCATACCCAT
GTTGCAGCCACTACTACCACCGCCAGCTGCGACCCGCCAGCACCAGCAGT
GTGAGCCAAAACTCCACCACTATAAAAAGGGAGGGGAAGACGGCCGAGCA
CCGCGTCACACGTGTCGTTCCCTTCACATGCGAACAGCTCTTTGgtaagc
cttccaatgcgcgggagggttgcaacggatgtagtaccaccagctatacc
aacgccacccaaatgtatgcatcactgacaaacttctttctcatttattt
cattttcaatagATGTTGTGGTCGACGTGGACAAGTACAAGCTCTTCCTC
CCCTATTGCACCCAGTCTAAAGTCTTGCGGCGGATCCCTCCCAATTTCAT
TCTGgtacgtctctccctttcgcttgaatattcgcgcgggagacaagaaa
tgctgtaaattttttgatacgtgacttacctgggaattcatcgatcagct
ccgagcactgcctcaccctccttccctcccccatctccaccctcagGCCC
AACTCCTCGTCGGCTTCAACAATGTCCTCAATGAGCGCTACACCTCCCGA
ATTCGTGTCGAACGTCCCAAATCCATTGTCATCGCGGCCTTAGATAGCCA
TATATTTACACGCTTGGAAAGCACGTGGCAGTTTCAGCCGGGCCCTGCCT
TCGCGGCAGAAATGAGCAGCAGCAGCAGCAGCAGCAGCAGCACCCATGTC
GATTTCAGAGTCAGATTCGAGGTGTCAAATCCATTGACGCAGGCGGCAAT
CGACTTAATCTTCGCTGATTTGGTCGAGAGGCAGATACACGCATTCGAAG
ACAGATGTTTTGCAGTGTATGGGGAAGGGATTGAGGGAGGGAAGATGAGG
AAGAAGATAGGAGAGGAAGAAAAAGAGGCAAGTGCAAGTGACCTTAAACG
ATAAAAATAAAATAACTAAGTTCAATCGAATGGCGCCAAATGCGATTTTT
CCTCTTTCTCGTGATAGCTTTCTCATGTACACACCAGTCGCTCCTTGTCT
CCCATACATCCTCCCTCCCTCCCACTCGCCGCAACCCCCCTTCCTTCCCT
CCCTTTGCCCTCACAATTCCTCCTTCTCTCCCTCCTTCATCGTCCCCACG
CTTCGTTCCTCCATGAACTCAAGCGCATTCCCATCCGGATCCCGGCAAAA
CACGGCCCGTCTGCCTGACTTACTCATGGTGTAAGGTACCCCCCCCTCGG
TCAATCTCTCTAGCAGCGGCTCGATATTTTCGACAGTAAAAGCGACGTGT
CTATCCCTCCCCCCATGCTCGGGACGCCCACGTGTCGGGTCTGGGTTAGG
CAGCTCCATGAGATGAATTTGTTGAGCACCGCCGCGGACGAAGGCCCCGG
GAAATGGGAGGGTGGATGGACGCATGTGGGTGTCGTCCTCGAAGCCGAGG
GTGCGGAGGTAGAAATTCTTTGAGGACATGTTAAGAGGTGGGACCGAAGG
TGAAGAAAGTAAGATGGGGGTCATGGCATAAAAAAGTCTATCTCCTGGAA
GTCGAGTCATCCATGGTTATTATCATCACTACCATCCCTCCCCAGTCGAC
ATAAACTTCGTCGTTGTGGCAGAAGCGGGGCCTACACAGAAAACGTACCA
GCGACGCTTGGGTATCCGAAACTAGGATCCCAGCATGAGCAATGCCGCCA
AAGGTGGGCTTGGGTGTCTTGAGGGCAATAACCAGGACAAAGCCGTGCGT
CGAAGCGAGCACCATAGATAAGGCGGCGGCCAAGCACAAGGGGGAAAAGC
AGGACTGGCGGCGACGTGTGGCCATGATAAATTGATTTGAGCAGACTCTA
GACGAATTGCGGCAGGAGAAGAAAAACGGGGGTGTTGGTCTGTGGCGTGT
ATGTAGTAGTGTCGCTTGCTTGAGCGCATGACATGTCGAAGACCAAGCGA
CGCAAAGAGGGTCGCGCCCACCCACGCTTCTGTTACAGGATCTACAACCA
AAGTATTAAAGCATTCGAGACTGCGCCAAGCCTGGCCACAAAGAGGTATG
TGCGAACGAGGGAGAACCTTTGTGTGCGTGCAAAAGCAAAAAAAGTCTCG
GGGTTGGTTGGGCTTCGCCAAACAGATTTCTAACGGGCGGGCGGATATGT
GGGCCTTGCATTACCTCGTATTACCGGTACGTAATGATGAAATCCCGCAC
CTAAAGGGGGCGTCTAAGTAGGAGAGTGCTAAAATGGAGAAAGCTGGAGG
AAGGAAAGGGAAGGGAAACCAATGAATAAGAGTTATTGCTGGAGACAACC
CATACTGATAAAGATCGAAGGAGAATCCTG
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protein sequence of NO07G03770.1

>NO07G03770.1-protein ID=NO07G03770.1-protein|Name=NO07G03770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=256bp
MAFLVRGGRERLVSWVTRSSPRLPFLPHSCRPPVPLPSPYPCCSHYYHRQ
LRPASTSSVSQNSTTIKREGKTAEHRVTRVVPFTCEQLFDVVVDVDKYKL
FLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIA
ALDSHIFTRLESTWQFQPGPAFAAEMSSSSSSSSSTHVDFRVRFEVSNPL
TQAAIDLIFADLVERQIHAFEDRCFAVYGEGIEGGKMRKKIGEEEKEASA
SDLKR*
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Synonyms
Publications