NO07G03410, NO07G03410 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G03410 vs. NCBI_GenBank
Match: XP_005854087.1 (hypothetical protein NGA_0451510 [Nannochloropsis gaditana CCMP526] >EKU22272.1 hypothetical protein NGA_0451510 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 148.7 bits (374), Expect = 1.800e-31 Identity = 338/972 (34.77%), Postives = 430/972 (44.24%), Query Frame = 0
Query: 110 RYQAARKLRLEMLRAQRESEETRGMGSIPQLISNSQARDRALRARSASPLPCSRGGRTASNVFERLSRDGTARVARQKAAKYQDPECTLTSGLSTRSTRSASPLPWLRSASPKKKPLIAVRFQEHENVQRARRKRLVKRIEDERAAQYTFMPKVLESKRSYHDGSGSSMAKTTQRS--SSSQHQRQHHSPSCKTTGEVEFDRCTFKPRIVSRKSECVPKGSVVERLLFEGQEAKEKXXXXXXXXEEQEMRPCTFKPTIPRYESPHRRSSPSTPRVMVVRSPVSRTHPCQHVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKVRDTIEGRASLSPPSGSLVVTKLQVSLERPTVSARREDLHYYDEQRDQRDRRSHSVDDRYRHRGVEGRGGARRSLSSPRGRSLSPCSRDRSSPVGQSGSISPSPQLYEQQDE--GCRTRKRALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRNCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSGRGGWRSRASRNVKGNRSWSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGQYGEEAISSGMGGDEAWRETARDGEREEAAQAFLPRDSFDDGDD-------TLPS-----------IFSRPQ----------------------------DQEEGWEEDTVLAPPSGTRASLAPRPLDSAKPTFTAFAGQTSMYESGCAEEGEEAQGTSPTAVPLKDSSTRDGDENNTTPSGSIFTDAADRVEEELSATQSSNKLDLSKPANSNSSNSSSMGLIQPSESQQLLSPDRALGSKAANHSLPPSPSFGAGYSVPLPRSSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQEQFLPHDSWDGTSARYPASSTGNSTMISSISQAGFTTTSDMPST 1032
R AR+ RLEMLRAQR++EE +PQL+S+S+AR+RAL+AR+ G T +VFERLS + ARV AA QD + + RST S++ + IA RFQE++ ++RA+++ LV+R+E+ERAAQ TF PK+ E KR + + +T+R E V +GSV++RLL EGQ+AK+K EE+E+R CTFKP + +P PR XXXXXXXXXXXXXXX LR+VRDTI+GR S PP+ SLVVTKLQVSLERP++++RREDLHY D RRS S RY R R SPRGRS SP +SS S SP+ Y++ E G R++ P R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX + +YG+E + G ++ WRE+ R+GERE AAQ FLPRDSFD+ DD + P+ S+PQ +T+ +PPSG R SLAP + K G AE T + PL D DG E + A RV E S + + D A SN + + L + + L S + HS GY R XXXXXXXXXXXXX AVQE+FLPHDSWDGT+A Y ++TG+ST++SSISQ+GF ++ ++ +T
Sbjct: 85 RLAKARERRLEMLRAQRDNEEASEHAFMPQLVSSSKARERALQARAVYHTASVDAGTTPLSVFERLSSNRQARVTHHPAATPQDFKGNFLQTPNPRST----------SSNARDTSSIAARFQEYDRLRRAKQEGLVQRLEEERAAQCTFQPKLPEKKRRHKCHRHADDPASTKRKCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVREGSVIKRLLREGQDAKKKLQHMRRLQEERELRGCTFKPHV----------TPYIPRACGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSHSFPVEDMRDRRALAPPRHRRHYEESEEAGVTTAALRRVRDTIQGRES-PPPTSSLVVTKLQVSLERPSLNSRREDLHYRDH------RRSPSGGSRYSPR--------RHHSLSPRGRSQSPYGGGQSS--CDERSASPTYSDYDRTGERHGSHYRRKGPP------RGHPPGMNPRRFSPGTKTSSFHKTRRYGRQTSRGWEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGQAAQYGDQSGRQTRYTQGQQQEYEYEGQEYGDETVPPLSGEEQPWRESLREGEREVAAQEFLPRDSFDETDDQGFDATASAPAHGKGQQAHNTRAESQPQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLYSPPSGLRISLAPSSSHTDK--------------LGSAE-------TMDCSGPLVD---EDGGEEASAGVQHSVNKLASRVIESSSRSSAVRTSD----ARSNRRSDGTTDLDLTTSATVLDS------AATVEHS---------GYGGRDTREEED--------------XXXXXXXXXXXXXPPREAVQEEFLPHDSWDGTAAGY--NATGSSTLVSSISQSGFVSSGEVSTT 954
BLAST of NO07G03410 vs. NCBI_GenBank
Match: XP_005852614.1 (hypothetical protein NGA_0451520, partial [Nannochloropsis gaditana CCMP526] >EKU23218.1 hypothetical protein NGA_0451520, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 148.7 bits (374), Expect = 1.800e-31 Identity = 338/972 (34.77%), Postives = 430/972 (44.24%), Query Frame = 0
Query: 110 RYQAARKLRLEMLRAQRESEETRGMGSIPQLISNSQARDRALRARSASPLPCSRGGRTASNVFERLSRDGTARVARQKAAKYQDPECTLTSGLSTRSTRSASPLPWLRSASPKKKPLIAVRFQEHENVQRARRKRLVKRIEDERAAQYTFMPKVLESKRSYHDGSGSSMAKTTQRS--SSSQHQRQHHSPSCKTTGEVEFDRCTFKPRIVSRKSECVPKGSVVERLLFEGQEAKEKXXXXXXXXEEQEMRPCTFKPTIPRYESPHRRSSPSTPRVMVVRSPVSRTHPCQHVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKVRDTIEGRASLSPPSGSLVVTKLQVSLERPTVSARREDLHYYDEQRDQRDRRSHSVDDRYRHRGVEGRGGARRSLSSPRGRSLSPCSRDRSSPVGQSGSISPSPQLYEQQDE--GCRTRKRALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRNCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSGRGGWRSRASRNVKGNRSWSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGQYGEEAISSGMGGDEAWRETARDGEREEAAQAFLPRDSFDDGDD-------TLPS-----------IFSRPQ----------------------------DQEEGWEEDTVLAPPSGTRASLAPRPLDSAKPTFTAFAGQTSMYESGCAEEGEEAQGTSPTAVPLKDSSTRDGDENNTTPSGSIFTDAADRVEEELSATQSSNKLDLSKPANSNSSNSSSMGLIQPSESQQLLSPDRALGSKAANHSLPPSPSFGAGYSVPLPRSSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQEQFLPHDSWDGTSARYPASSTGNSTMISSISQAGFTTTSDMPST 1032
R AR+ RLEMLRAQR++EE +PQL+S+S+AR+RAL+AR+ G T +VFERLS + ARV AA QD + + RST S++ + IA RFQE++ ++RA+++ LV+R+E+ERAAQ TF PK+ E KR + + +T+R E V +GSV++RLL EGQ+AK+K EE+E+R CTFKP + +P PR XXXXXXXXXXXXXXX LR+VRDTI+GR S PP+ SLVVTKLQVSLERP++++RREDLHY D RRS S RY R R SPRGRS SP +SS S SP+ Y++ E G R++ P R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX + +YG+E + G ++ WRE+ R+GERE AAQ FLPRDSFD+ DD + P+ S+PQ +T+ +PPSG R SLAP + K G AE T + PL D DG E + A RV E S + + D A SN + + L + + L S + HS GY R XXXXXXXXXXXXX AVQE+FLPHDSWDGT+A Y ++TG+ST++SSISQ+GF ++ ++ +T
Sbjct: 33 RLAKARERRLEMLRAQRDNEEASEHAFMPQLVSSSKARERALQARAVYHTASVDAGTTPLSVFERLSSNRQARVTHHPAATPQDFKGNFLQTPNPRST----------SSNARDTSSIAARFQEYDRLRRAKQEGLVQRLEEERAAQCTFQPKLPEKKRRHKCHRHADDPASTKRKCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVREGSVIKRLLREGQDAKKKLQHMRRLQEERELRGCTFKPHV----------TPYIPRACGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSHSFPVEDMRDRRALAPPRHRRHYEESEEAGVTTAALRRVRDTIQGRES-PPPTSSLVVTKLQVSLERPSLNSRREDLHYRDH------RRSPSGGSRYSPR--------RHHSLSPRGRSQSPYGGGQSS--CDERSASPTYSDYDRTGERHGSHYRRKGPP------RGHPPGMNPRRFSPGTKTSSFHKTRRYGRQTSRGWEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGQAAQYGDQSGRQTRYTQGQQQEYEYEGQEYGDETVPPLSGEEQPWRESLREGEREVAAQEFLPRDSFDETDDQGFDATASAPAHGKGQQAHNTRAESQPQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLYSPPSGLRISLAPSSSHTDK--------------LGSAE-------TMDCSGPLVD---EDGGEEASAGVQHSVNKLASRVIESSSRSSAVRTSD----ARSNRRSDGTTDLDLTTSATVLDS------AATVEHS---------GYGGRDTREEED--------------XXXXXXXXXXXXXPPREAVQEEFLPHDSWDGTAAGY--NATGSSTLVSSISQSGFVSSGEVSTT 902 The following BLAST results are available for this feature:
BLAST of NO07G03410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 2
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03410 ID=NO07G03410|Name=NO07G03410|organism=Nannochloropsis oceanica|type=gene|length=5451bpback to top protein sequence of NO07G03410.1 >NO07G03410.1-protein ID=NO07G03410.1-protein|Name=NO07G03410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1817bpback to top Synonyms
Publications
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