NO07G03100, NO07G03100 (gene) Nannochloropsis oceanica

Overview
NameNO07G03100
Unique NameNO07G03100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1122
Alignment locationchr7:863501..864622 +

Link to JBrowse

Properties
Property NameValue
DescriptionWd repeat-containing protein 82
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:863501..864622 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005847mRNA cleavage and polyadenylation specificity factor complex
GO:0048188Set1C/COMPASS complex
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR037867Swd2
IPR001680WD40_repeat
Homology
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_020341155.1 (WD repeat-containing protein 82-like isoform X1 [Oncorhynchus kisutch] >XP_021426002.1 WD repeat-containing protein 82-like [Oncorhynchus mykiss] >XP_023842270.1 WD repeat-containing protein 82 [Salvelinus alpinus])

HSP 1 Score: 210.3 bits (534), Expect = 1.000e-50
Identity = 119/341 (34.90%), Postives = 180/341 (52.79%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDATEE----RVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            V C+DY   GE  +++++D ++ L +  EGK  + L+ KKYGV+L R+TH   + +  S      T          IRYLSL DN+Y+R+F GH  RV AL+MS  DD F+S S+D T+R+W L+ P C G            +N    P   +  +DP GL+FA      D   +KLYD R F +G F +F        +TL ++                W  + FS DGK +L+ST GG   ++D ++  V    +GY N KG+++ AC+T D + ++ GSE+G V V+ +TE      V+DG       H+GP+  ++ NP Y   ASAC+++  W+
Sbjct:   24 VNCVDYSSNGESAISSSDDDSIVLYDCQEGKPIRTLYSKKYGVDLIRYTHGDANTVVYSSNKLDDT----------IRYLSLTDNKYIRYFPGHTDRVVALSMSPVDDTFISGSLDMTIRLWDLRSPNCQG-----------LTNPLGKP---VCSYDPEGLIFAAGV---DSEAIKLYDLRSFDKGPFASF--------ETLFSR-------------VCEWTGLKFSRDGKQILISTNGGAIRILDAFNGSVLHTFSGYNNSKGISLEACFTPDSDFVMIGSEDGRVHVW-STESGMKIAVLDG------KHSGPINTLQFNPKYMTFASACSNMAFWL 309          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_020442357.1 (WD repeat-containing protein 82-like isoform X1 [Monopterus albus])

HSP 1 Score: 209.9 bits (533), Expect = 1.300e-50
Identity = 124/341 (36.36%), Postives = 178/341 (52.20%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTH-HAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVF---DATEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            V C+DY   GE  +++++D  + L +  EGK ++ LF KKYGV+L R+TH   Q+V+ SS        + L  T   IRYLSL DN+Y+R+F GH ARV +L+MS  DD F+S+S+D T+RIW L+ P C G            +N    P   +  FDP GL+FA      D   +KLYD R F +G F  F    N  R                      W  + FS DGK +L+ST GGM  V++ +   +    +GY N +G+ + AC+T D   I+ GSE+G V V+      +  V+DG       H+GP+  ++ NP Y   ASAC ++  W+
Sbjct:   24 VNCVDYSPNGENAISSSDDDCIVLYDIQEGKPKRTLFSKKYGVDLIRYTHGDTQTVVYSS--------NKLDDT---IRYLSLTDNKYIRYFPGHTARVISLSMSPVDDMFVSSSLDRTIRIWDLRSPNCQG-----------LTNPLGKP---VCSFDPDGLIFAAGV---DSQAIKLYDRRAFDKGPFTTFETKFNRHR-------------------VCDWTGLKFSNDGKMILISTNGGMVCVLNAFTGCLVHTFSGYNNSRGIPLEACFTPDSQFIMIGSEDGRVHVWSTDSGMKVAVLDG------KHSGPINTLQFNPRYMTFASACTNMTFWL 311          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_018617737.1 (PREDICTED: WD repeat-containing protein 82 [Scleropages formosus] >KPP78043.1 WD repeat-containing protein 82-like [Scleropages formosus])

HSP 1 Score: 208.8 bits (530), Expect = 3.000e-50
Identity = 118/340 (34.71%), Postives = 178/340 (52.35%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDA---TEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            + C D+   GE ++++++D ++ L +  EGK ++ L+ KKYGV+L R+TH A +V+ SS                 IRYLSL+DN+Y+R+F GH  RV AL+MS  DD F+S S+D T+R+W L+ P C G  ++Q             P   +  FDP GL+FA      +  ++KLYD R F +G F  F +  +                         W  + FS DGK +LVST GG   V+D +   V     GY N KG+ + A +T D   I+ GSE+G++ V++A    +  V+DG       HTGPV  ++ NP +   ASAC+++  W+
Sbjct:   24 INCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSS-----------NKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSMDKTIRLWDLRSPNCQGLMHLQ-----------GKP---VCSFDPEGLIFAAGV---NSEMVKLYDLRSFDKGPFATFKLPIDR---------------------NCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHCFGGYNNSKGVTLEASFTPDSQFIMIGSEDGKIHVWNAESGMKVAVLDG------KHTGPVTCLQFNPKFMTFASACSNMAFWL 308          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_019716699.1 (PREDICTED: WD repeat-containing protein 82 [Hippocampus comes])

HSP 1 Score: 208.4 bits (529), Expect = 3.900e-50
Identity = 119/360 (33.06%), Postives = 187/360 (51.94%), Query Frame = 0
Query:   11 LEAVRVQELQRGCVVSGTAPVTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDA---TEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            L + RV ++ R      T  + C D+   GE ++++++D ++ L +  EGK ++ L+ KKYGV+L R+TH A +V+ SS                 IRYLSL+DN+Y+R+F GH  RVT+L+MS  DD F+S S+D T+R+W L+ P C G  ++Q             P   +  FDP GL+FA      +  ++KLYD R F +G F  F +  +                         W  + FS DGK +L+ST GG   ++D +   V     GY N KG+ + A +T D   ++ GSE+G++ V++A    +  V+DG       HTGP+  ++ NP +   ASAC+++  W+
Sbjct:    8 LRSFRVAKVFR----ENTDKINCFDFSSNGESIISSSDDDSLVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSS-----------NKIDDTIRYLSLHDNKYIRYFPGHSKRVTSLSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQ-----------GKP---VCSFDPEGLIFAAGI---NSEMVKLYDLRSFDKGPFATFKLQYDR---------------------TCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNNKGVTLEASFTPDSQFVVIGSEDGKIHVWNAESGMKVAVLDG------KHTGPITCLQFNPKFMTFASACSNMAFWL 308          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_019957141.1 (PREDICTED: WD repeat-containing protein 82-like isoform X2 [Paralichthys olivaceus])

HSP 1 Score: 208.0 bits (528), Expect = 5.100e-50
Identity = 122/341 (35.78%), Postives = 181/341 (53.08%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTH-HAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVF---DATEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            V C+D+   G++ +++++D  + L +  EGK ++ LF KKYGV+L R+TH   Q+V+ SS        + L  T   IRYLSL DN+Y+R+F GH ARV AL+MS  D+ F+S S+D T+RIW L+ P C G            +N    P   +  FDP GL+FA   + Q    +KLYD R F +G F +F   E    +T                    W  + FS DGK +L+ST GGM  V++ +   V    +GY N +G+++ AC+T D   ++ GSE+G V V+      +  V+DG       H GP+  ++ NP Y   ASAC ++  W+
Sbjct:   24 VNCVDFSPSGQHAISSSDDDCIVLYDIQEGKPKRTLFSKKYGVDLIRYTHGDTQTVVYSS--------NKLDDT---IRYLSLSDNKYIRYFPGHTARVIALSMSPVDETFISGSLDKTIRIWDLRSPNCQG-----------LTNPLGKP---VCSFDPDGLIFAAGVESQ---AIKLYDLRAFDKGPFASF---ETRFNRT------------------CDWTGLKFSNDGKQILISTNGGMIRVLNAFSGSVLHNFSGYNNSRGISLEACFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDG------KHPGPINTLQFNPRYMTFASACTNMNFWL 309          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_003448358.1 (PREDICTED: WD repeat-containing protein 82 [Oreochromis niloticus] >XP_005724645.1 PREDICTED: WD repeat-containing protein 82 [Pundamilia nyererei] >XP_005927462.1 PREDICTED: WD repeat-containing protein 82 [Haplochromis burtoni] >XP_006783260.1 PREDICTED: WD repeat-containing protein 82-like [Neolamprologus brichardi] >XP_012773969.1 WD repeat-containing protein 82 [Maylandia zebra])

HSP 1 Score: 207.6 bits (527), Expect = 6.700e-50
Identity = 118/360 (32.78%), Postives = 187/360 (51.94%), Query Frame = 0
Query:   11 LEAVRVQELQRGCVVSGTAPVTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDA---TEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            L + RV ++ R      T  + C D+   GE ++++++D ++ L +  EGK ++ L+ KKYGV+L R+TH A +V+ SS                 IRYLSL+DN+Y+R+F GH  RVT+L+MS  DD F+S S+D T+R+W L+ P C G  ++Q             P   +  FDP GL+FA      +  ++KLYD R F +G F  F +  +                         W  + FS DGK +L+ST GG   ++D +   V     GY N KG+ + A +T D   ++ GSE+G++ V++A    +  ++DG       HTGP+  ++ NP +   ASAC+++  W+
Sbjct:    8 LRSFRVAKVFR----ENTDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSS-----------NKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQ-----------GKP---VCSFDPEGLIFAAGI---NSEMVKLYDLRSFDKGPFATFKLQYDR---------------------TCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNSKGVTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDG------KHTGPITCLQFNPKFMTFASACSNMAFWL 308          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_018536927.1 (PREDICTED: WD repeat-containing protein 82-like isoform X2 [Lates calcarifer])

HSP 1 Score: 207.6 bits (527), Expect = 6.700e-50
Identity = 118/338 (34.91%), Postives = 174/338 (51.48%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVF---DATEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVL 366
            V C+DY   GE  +++++D  + L +  EGK ++ L+ KKYGV+L R+TH     +  S      T          IRYLSL DN+Y+R+F GH ARV AL+MS  DD F+S S+D T+RIW L+ P C G            +N    P   +  FDP GL+FA   + Q    +KLYD R F +G F +F    N +                       W  + FS DGK +L+ST GGM  V++ ++  V    +GY N +G+++ AC+T D   ++ GSE+G V V+      +  V+DG       H GP+  ++ NP Y   ASAC ++++
Sbjct:   24 VNCVDYSPNGENAISSSDDDCIVLYDIREGKPKRTLYSKKYGVDLIRYTHGDTQTVVYSSNKVDDT----------IRYLSLVDNKYIRYFPGHTARVIALSMSPVDDTFISGSLDKTIRIWDLRSPNCQG-----------LTNPLGKP---VCSFDPDGLIFAAGVESQ---AIKLYDLRAFDKGPFASFETRFNRV---------------------CDWTGLKFSNDGKQILISTNGGMIRVLNAFNGSVLHTFSGYNNSRGISLEACFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDG------KHPGPINTLQFNPRYMTFASACTNMLV 307          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_020484645.1 (WD repeat-containing protein 82 [Labrus bergylta])

HSP 1 Score: 207.6 bits (527), Expect = 6.700e-50
Identity = 114/340 (33.53%), Postives = 179/340 (52.65%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDA---TEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            + C D+   GE ++++++D ++ L +  EGK ++ L+ KKYGV+L R+TH A +V+ SS                 IRYLSL+DN+Y+R+F GH  RVT+L+MS  DD F+S S+D T+R+W L+ P C G  ++Q             P   +  FDP GL+FA      +  ++KLYD R F +G F  F +  +                         W  + FS DGK +LVST GG   ++D +   V     GY N KG+ + A +T D   ++ GSE+G++ V++A    +  ++DG       HTGP+  ++ NP +   ASAC+++  W+
Sbjct:   24 INCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSS-----------NKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQ-----------GKP---VCSFDPEGLIFAAGI---NSEMVKLYDLRSFDKGPFATFKLQYDR---------------------TCEWTGLKFSNDGKLILVSTNGGALRILDAFKGAVLHSFVGYNNSKGVTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDG------KHTGPITCLQFNPKFMTFASACSNMAFWL 308          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_008606029.1 (hypothetical protein SDRG_02231 [Saprolegnia diclina VS20] >EQC40330.1 hypothetical protein SDRG_02231 [Saprolegnia diclina VS20])

HSP 1 Score: 207.2 bits (526), Expect = 8.700e-50
Identity = 115/342 (33.63%), Postives = 186/342 (54.39%), Query Frame = 0
Query:   29 APVTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTL--LAQQPTIDPEVARKLV-QAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDATEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            A +T +D+HR G   VTA  DGT+H IN + G + K +  KKYGV+L R THH   +L SS+  A+          H +RY SL+DN++LRF++GH A++T+L M  T D F++AS+DGT RIW ++ P    +G ++ G  G           + A +D  GLVF V        ++++YDAR F++G F  F ++++ +   L  L QQ        RK   +   + ++FS D ++LL+ST  G+ + +D ++ ++ R    + N  G  +   Y+ D  +I  G+++G +C++DA    V    V  L GH GPV  ++ NP    + S   + + W+
Sbjct:   27 AIMTSIDFHRAGNVAVTARSDGTIHAINCITGTSHKTILTKKYGVDLLRTTHHPDCLLWSSQNDAND---------HSVRYHSLFDNKFLRFYAGHTAKITSLMMHPTADEFLTASMDGTFRIWDIRSPD--ARGELKCGDAGRV---------ISAAYDTDGLVFGV---YTGDGIVRMYDARNFTDGPFAKFPLTDDSIAAVLRPLLQQ--------RKFTGKLDVLALTFSPDQQHLLLSTNAGVLIQLDAFEGKLKRIFASHSNLSGTKLGVGYSPDGKYIACGADDGSICIYDAHSGAV---TVPALQGHVGPVFDLQWNPQRHLLGSVHANTLFWL 334          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_010900157.1 (PREDICTED: WD repeat-containing protein 82 [Esox lucius])

HSP 1 Score: 207.2 bits (526), Expect = 8.700e-50
Identity = 117/340 (34.41%), Postives = 178/340 (52.35%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDA---TEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            + C D+   GE ++++++D ++ L +  EGK ++ L+ KKYGV+L R+TH A +V+ SS                 IRYLSL+DN+Y+R+F GH  RVTAL+MS  DD F+S S+D T+R+W L+ P C G  ++Q             P   +  FDP GL+FA      +  ++KLYD R F +G F  F +  +                         W  + FS DGK +LVST GG   ++D +   V     GY N K + + A +T D   I+ GSE+G++ V++A    +  V+DG       HTGPV  ++ NP +   ASAC+++  W+
Sbjct:   24 INCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSS-----------NKIDDTIRYLSLHDNKYIRYFPGHNKRVTALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQ-----------GKP---VCSFDPEGLIFAAGV---NSEMVKLYDLRSFDKGPFATFKLQYDR---------------------TCEWTGLKFSNDGKLILVSTNGGALRLLDAFKGAVMHSFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWNAESGMKVAVLDG------KHTGPVTCLQFNPKFMTFASACSNMAFWL 308          
The following BLAST results are available for this feature:
BLAST of NO07G03100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_020341155.11.000e-5034.90WD repeat-containing protein 82-like isoform X1 [O... [more]
XP_020442357.11.300e-5036.36WD repeat-containing protein 82-like isoform X1 [M... [more]
XP_018617737.13.000e-5034.71PREDICTED: WD repeat-containing protein 82 [Sclero... [more]
XP_019716699.13.900e-5033.06PREDICTED: WD repeat-containing protein 82 [Hippoc... [more]
XP_019957141.15.100e-5035.78PREDICTED: WD repeat-containing protein 82-like is... [more]
XP_003448358.16.700e-5032.78PREDICTED: WD repeat-containing protein 82 [Oreoch... [more]
XP_018536927.16.700e-5034.91PREDICTED: WD repeat-containing protein 82-like is... [more]
XP_020484645.16.700e-5033.53WD repeat-containing protein 82 [Labrus bergylta][more]
XP_008606029.18.700e-5033.63hypothetical protein SDRG_02231 [Saprolegnia dicli... [more]
XP_010900157.18.700e-5034.41PREDICTED: WD repeat-containing protein 82 [Esox l... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000549NSK000549Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03100.1NO07G03100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581030gene_2642Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100056g40gene3485Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03100.1NO07G03100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03100 ID=NO07G03100|Name=NO07G03100|organism=Nannochloropsis oceanica|type=gene|length=1122bp
ATGACGTGCGGAAGTAGCGGGATGAGTGGCCTGGAAGCCGTCCGGGTGCA
GGAGCTGCAACGTGGCTGCGTGGTTTCGGGGACGGCTCCAGTCACTTGCT
TGGATTATCATCGGGAAGGTGAGTATTTAGTGACCGCGGCGGAGGACGGA
ACCGTGCACCTGATAAATGCCTTGGAGGGCAAAGCGCGGAAGAAACTATT
TTGCAAGAAGTATGGGGTGGAGCTGGCCAGGTTCACGCATCATGCCCAGA
GTGTTTTGTGCAGTAGCCGGCCCTCGGCAAGCCAGACAGCATCCGCCTTG
GGAACGACGGCGCATGACATTCGTTATCTGTCCCTGTACGACAACCAGTA
CTTGCGTTTTTTTTCGGGCCATGAAGCGCGAGTGACAGCGTTGGCCATGT
CTTACACAGACGATCGATTTATGAGCGCATCGGTTGATGGTACCGTTCGG
ATATGGACATTGCAGCAACCCAAGTGCTTGGGCCAGGGCAACATTCAGAT
AGGTGGTGGGGGAAGCTACAGCAACAGCAGCAGTAGTCCTTGTCCTGTTT
TAGCGGAGTTTGACCCGTCGGGGTTGGTTTTTGCAGTGTGCGCGCAGGTG
CAAGACAGACATTTGTTGAAATTGTATGACGCGAGGAAGTTCAGTGAAGG
GGCTTTTGAAAATTTCGGGATCTCTGAGAATGAGTTACGACAGACGTTGC
TTGCACAACAACCAACGATTGACCCTGAGGTGGCTCGTAAGTTGGTACAG
GCTCCGTGGATTGACATGAGCTTTAGCGCGGACGGGAAGAATTTACTGGT
GTCGACCAAGGGAGGGATGACGCTTGTGATTGACACTTACGATTTGCAAG
TGACGAGGTTTCTGACCGGCTATAAGAATGAGAAGGGATTGAATATCACA
GCTTGTTATACCTCGGATGTGAACCACATTTTGACGGGCTCGGAGGAGGG
GGAGGTATGTGTGTTTGATGCGACGGAGGAGAGGGTAATGGACGGGGTGG
TGTGTCGATTGAGTGGGCATACAGGCCCTGTGAGGCAGGTGAAGTGTAAC
CCGGTCTACGAGCAGGTGGCGAGTGCGTGTAACCATGTGGTGTTGTGGAT
AACGCCCCCACGAGGGAAATAA
back to top

protein sequence of NO07G03100.1

>NO07G03100.1-protein ID=NO07G03100.1-protein|Name=NO07G03100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=374bp
MTCGSSGMSGLEAVRVQELQRGCVVSGTAPVTCLDYHREGEYLVTAAEDG
TVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASAL
GTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVR
IWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQV
QDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQ
APWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNIT
ACYTSDVNHILTGSEEGEVCVFDATEERVMDGVVCRLSGHTGPVRQVKCN
PVYEQVASACNHVVLWITPPRGK*
back to top
Synonyms
Publications