NO07G02300, NO07G02300 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02300 vs. NCBI_GenBank
Match: EWM27229.1 (peptide methionine sulfoxide reductase b5 [Nannochloropsis gaditana]) HSP 1 Score: 382.1 bits (980), Expect = 1.400e-102 Identity = 187/236 (79.24%), Postives = 197/236 (83.47%), Query Frame = 0 Query: 38 SMRAFPPTFTITTLSLVQIAVLSTRGASGFVVPAAASKAFLFTQAAQSANAAISRKRTAGAPRMLFTRMFGGTPAPDPATNLATKPALTKIKTEDEWKQILSPTAFKVLRRKATEPRKVNMAKGGWDDHTAKGTYVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDSDGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFIPEGKDVIQPCTYEGPVYE 274 SMR TI TLS+VQ+A S RGASGFV A K F A+ SA A SR T P MLF+RMF T A DPATNLA KPALTK+KTE+EWKQILSPTAFKVLRRKATEPRKV +AKGGWDDH AKGTYVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRD+DGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGF+PEG D +QPCTYEGPVYE Sbjct: 20 SMRFSLSFSTIATLSIVQLASCSIRGASGFVSSGAPKKLFWTRSASFSAVGARSRSTT--VPSMLFSRMF-ATQAQDPATNLAAKPALTKVKTEEEWKQILSPTAFKVLRRKATEPRKVTVAKGGWDDHNAKGTYVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDADGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFVPEGTDAVQPCTYEGPVYE 252
BLAST of NO07G02300 vs. NCBI_GenBank
Match: CBJ49291.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 233.0 bits (593), Expect = 1.100e-57 Identity = 107/170 (62.94%), Postives = 125/170 (73.53%), Query Frame = 0 Query: 107 FGGTPAPDPATNLATKPALTKIKTEDEWKQILSPTAFKVLRRKATEPRKVNMAKGGWDDHTAKGTYVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDSDGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFIPEGK----DVIQPCTYEGPVY 273 F PA T LA +PAL K K + +WK+ L ++VLR KATEP V A GG+DD KGTYVC GC+TPLY + KFDCGCGWPGFWTNI+DAVYE++D+DG RCEILCS C GHLGHVFR EGFGNP P+ERHCVNSVS+ FIPEGK D ++ CTY G V+ Sbjct: 25 FWKPPATSKHTRLAKEPALDKCKPDADWKEQLQQNTYQVLRGKATEPAGVRKASGGFDDVFDKGTYVCAGCRTPLYEDSHKFDCGCGWPGFWTNIQDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPEGKTDGPDAVE-CTYTGRVF 193
BLAST of NO07G02300 vs. NCBI_GenBank
Match: OLP98216.1 (Peptide methionine sulfoxide reductase B5 [Symbiodinium microadriaticum]) HSP 1 Score: 187.6 bits (475), Expect = 5.200e-44 Identity = 92/163 (56.44%), Postives = 107/163 (65.64%), Query Frame = 0 Query: 109 GTPAPDPA----------TNLATKPALTKIKTEDEWKQILSPTAFKVLRRKATEPRKVNMAKGGWDDHTAKGTYVCTGC-----KTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDSDGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFIP 257 G PA DPA T+L +E EW + L +KVLR KATEP G+DDH G Y+C+GC + PLYTS+MKFDCGCGWPGFWTN+KD VYEQRD+DG RCEILCS+CDGHLGHVFR EGFG DERHCVNS+S+ F+P Sbjct: 2 GEPARDPAAYEVPKSNGSTHLGKASTAAVRLSEKEWSEKLRTNMWKVLRNKATEPGHRITFPQGFDDHKDSGVYLCSGCYFAGLQVPLYTSSMKFDCGCGWPGFWTNVKDEVYEQRDADGRRCEILCSKCDGHLGHVFRGEGFGY-STDERHCVNSLSLVFLP 163
BLAST of NO07G02300 vs. NCBI_GenBank
Match: XP_015663566.1 (hypothetical protein ABB37_01513 [Leptomonas pyrrhocoris] >KPA85127.1 hypothetical protein ABB37_01513 [Leptomonas pyrrhocoris]) HSP 1 Score: 181.8 bits (460), Expect = 2.900e-42 Identity = 86/151 (56.95%), Postives = 104/151 (68.87%), Query Frame = 0 Query: 113 PDPATNLA--TKPALTKIKTEDEWKQILSPTAFKVLRRKATEPRKVNMAKGGWDDHTAKGTYVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDSDGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFIP-EGKD 261 P ATN A + TK K E EW+ LSP + +LR K T+P G +DD +G YVC CKTPLYTSAMKF CGCGWPGFW +I+ AV EQ D DG R EI+C+ C+ HLGH+FR+EGF NPPP+ERHCVNS S+ FIP +GK+ Sbjct: 47 PSSATNCAQPNEENGTKDKPESEWRATLSPAEYHILREKGTDP-----VGGKYDDLYDEGEYVCAACKTPLYTSAMKFACGCGWPGFWDSIQKAVREQPDKDGRRVEIVCNACNSHLGHIFRHEGFSNPPPNERHCVNSTSILFIPAQGKN 192
BLAST of NO07G02300 vs. NCBI_GenBank
Match: KPI84299.1 (hypothetical protein ABL78_6642 [Leptomonas seymouri]) HSP 1 Score: 178.7 bits (452), Expect = 2.400e-41 Identity = 81/142 (57.04%), Postives = 98/142 (69.01%), Query Frame = 0 Query: 115 PATNLA-TKPALTKIKTEDEWKQILSPTAFKVLRRKATEPRKVNMAKGGWDDHTAKGTYVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDSDGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFI 256 P TN A +K K E EW+ IL+P +++LR K T+P G +D+ +G YVCT CKTPLYTSAMKF CGCGWPGFW I AV EQ D DG R EI+C+ C+ HLGH+FRNEGF NPPP+ERHCVNS S+ F+ Sbjct: 4 PKTNCAQANDGGSKDKPEAEWRAILTPAEYRILREKGTDP-----VGGKYDNFFGEGEYVCTACKTPLYTSAMKFACGCGWPGFWDCIPKAVREQPDKDGRRVEIVCNACNSHLGHIFRNEGFSNPPPNERHCVNSTSITFV 140
BLAST of NO07G02300 vs. NCBI_GenBank
Match: CCW62236.1 (unnamed protein product [Phytomonas sp. isolate EM1]) HSP 1 Score: 170.6 bits (431), Expect = 6.600e-39 Identity = 75/124 (60.48%), Postives = 91/124 (73.39%), Query Frame = 0 Query: 134 WKQILSPTAFKVLRRKATEPRKVNMAKGGWDDHTAKGTYVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDSDGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFIPE 258 W+ L+ + ++VLRRKAT+PR G +D+ G YVC GC TPLY SAMKF CGCGWPGFW + AV E+ D+DG R EILC+ C+GHLGHVFR EGF NPPP+ERHCVNS S+ FIP+ Sbjct: 31 WRAKLTASQYRVLRRKATDPR-----GGHYDNFFGDGMYVCAGCGTPLYASAMKFACGCGWPGFWDCLPKAVREEPDADGMRTEILCNACNGHLGHVFRGEGFKNPPPNERHCVNSSSIMFIPK 149
BLAST of NO07G02300 vs. NCBI_GenBank
Match: EPY39141.1 (hypothetical protein AGDE_04788 [Angomonas deanei] >EPY41440.1 hypothetical protein AGDE_02484 [Angomonas deanei]) HSP 1 Score: 164.9 bits (416), Expect = 3.600e-37 Identity = 78/146 (53.42%), Postives = 95/146 (65.07%), Query Frame = 0 Query: 117 TNLATKPALTKIKT--EDEWKQILSPTAFKVLRRKATEPRKVNMAKGGWDDHTAKGTYVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDSDGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFIPEGKD 261 TN A+ +K + EWK++LSP AF +LR+K T+ R G D A G Y C C LYTS MKFDCGCGWPGFW + AV E++D+DG R EILC+ C+GHLGHVFR EGF NPPP+ERHCVN S+ F P K+ Sbjct: 22 TNCASVKEKNGVKDVGDAEWKKLLSPHAFYILRQKGTDAR-----HGPLDKCFADGLYYCAACGELLYTSKMKFDCGCGWPGFWDCVPKAVREEQDADGHRSEILCNACNGHLGHVFRGEGFHNPPPNERHCVNDTSLRFEPMSKE 162
BLAST of NO07G02300 vs. NCBI_GenBank
Match: EPY40285.1 (hypothetical protein AGDE_03643 [Angomonas deanei]) HSP 1 Score: 164.9 bits (416), Expect = 3.600e-37 Identity = 78/146 (53.42%), Postives = 95/146 (65.07%), Query Frame = 0 Query: 117 TNLATKPALTKIKT--EDEWKQILSPTAFKVLRRKATEPRKVNMAKGGWDDHTAKGTYVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDSDGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFIPEGKD 261 TN A+ +K + EWK++LSP AF +LR+K T+ R G D A G Y C C LYTS MKFDCGCGWPGFW + AV E++D+DG R EILC+ C+GHLGHVFR EGF NPPP+ERHCVN S+ F P K+ Sbjct: 3 TNCASVKEKNGVKDVGDAEWKKLLSPHAFYILRQKGTDAR-----HGPLDKCFADGLYYCAACGELLYTSKMKFDCGCGWPGFWDCVPKAVREEQDADGHRSEILCNACNGHLGHVFRGEGFHNPPPNERHCVNDTSLRFEPMSKE 143
BLAST of NO07G02300 vs. NCBI_GenBank
Match: CCW68573.1 (unnamed protein product [Phytomonas sp. isolate Hart1]) HSP 1 Score: 164.9 bits (416), Expect = 3.600e-37 Identity = 84/180 (46.67%), Postives = 110/180 (61.11%), Query Frame = 0 Query: 78 LFTQAAQSANAAISRKRTAGAPRMLFTRMFGGTPAPDPATNLATKPALTKIKTEDEWKQILSPTAFKVLRRKATEPRKVNMAKGGWDDHTAKGTYVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDSDGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFIPE 258 +F+ AA S++ IS + GA G T P +K + W+ L+ T ++VLR+K+T+PR G +DD G YVC GC TPLYTS MKF CGCGWPGFW + AV E+ D+DG R EI+C+ C+GHLGHVFR+EGF NP P+ERHCVN+ S+ FIP+ Sbjct: 24 VFSGAASSSSRLISSMNSNGA---------GSTHCAQPNEKDGSKDI-----GDLAWRAKLNTTQYRVLRQKSTDPR-----GGSYDDFFGDGIYVCAGCDTPLYTSTMKFACGCGWPGFWDCLPKAVREEPDADGRRTEIICNACNGHLGHVFRHEGFKNPLPNERHCVNNSSIKFIPK 184
BLAST of NO07G02300 vs. NCBI_GenBank
Match: XP_010700621.1 (peptide methionine sulfoxide reductase, putative [Leishmania panamensis] >AIN99914.1 peptide methionine sulfoxide reductase, putative [Leishmania panamensis]) HSP 1 Score: 161.4 bits (407), Expect = 4.000e-36 Identity = 70/124 (56.45%), Postives = 87/124 (70.16%), Query Frame = 0 Query: 133 EWKQILSPTAFKVLRRKATEPRKVNMAKGGWDDHTAKGTYVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDSDGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFIP 257 EW+++L+ + +LR K T+P G +DD +G YVC GCKTPLY S+MKF CGCGWPGF+ I V EQ D DG R EI+C+ C+GHLGHVFRNEGF NPPP+ERHCVN+ S+ P Sbjct: 24 EWRRVLTSQEYYILREKGTDP-----VGGKYDDVFEEGVYVCAGCKTPLYLSSMKFACGCGWPGFYDCIPKRVREQPDRDGHRVEIVCNACNGHLGHVFRNEGFRNPPPNERHCVNNTSIVLQP 142 The following BLAST results are available for this feature:
BLAST of NO07G02300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02300 ID=NO07G02300|Name=NO07G02300|organism=Nannochloropsis oceanica|type=gene|length=1587bpback to top protein sequence of NO07G02300.1 >NO07G02300.1-protein ID=NO07G02300.1-protein|Name=NO07G02300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=274bpback to top Synonyms
Publications
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