NO07G02130, NO07G02130 (gene) Nannochloropsis oceanica

Overview
NameNO07G02130
Unique NameNO07G02130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3515
Alignment locationchr7:632717..636231 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:632717..636231 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G02130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL103nonsL103Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL096nonsL096Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR134ngnoR134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR131ngnoR131Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000622NSK000622Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02130.1NO07G02130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669125gene_2539Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02130.1NO07G02130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02130 ID=NO07G02130|Name=NO07G02130|organism=Nannochloropsis oceanica|type=gene|length=3515bp
TGCAGCAAGCTAAAGACACACACCAACCTACATCAAACTCCACACATTAC
ACAGCGCCTGTGCGACAAGGACAAGATGCCGCTCAAGAAGTCAGCGCTAG
AGCTCGCTAAAGAGGAGCAGGCAATGGCTCTGGAGCAGCGGGTGCTTGCG
CGCCTAGAGAGAGAGTCGAAGTCTCCGAATTCTCAGAAGCACAATAGCAC
CAGTCCTAGGCGGGCCACGGGGCATCTCCCAGCCACCATGCGTCGCCTCT
CGTCTGCCATTGCGATGTCACGGTCCCAGACGAAAAAGGAGCGGGAGAGG
GAGGAGGAGCAGGAGGAGGACCAGGAGGAGGACCAGGAGGAGGAGCAGGA
GGAGGAAGTGGAGGAGGCGGAGATGGAGGAGCAGGGAAAGGAGGAGAAGG
AGAAGGAAAAGGAAGTGGACAGTCGCATGAAAGCACGACCATCTCAAAAG
AAAAGAAGTCTCAAGCCGATGGCCGGTAAGAGGGACGGCGGTGGAGATTG
GAGCGGCAGCGGGGCACGGAAACGAGGAACTGCCACGGGTGCGGCTGCCC
ATCGTCAGTCTAACGGCAAGAGGGTTCGACTCCTTCGACTCCAGCGAGAA
GAGGAGTACAAGGACGAGGTAGAGGACGGGGAAGGAGGATATGTGCCGCC
GTCTTCTCCGCTTGGTGTGAGCGCGCTACGACGCGTCGGCCAATCCCCGT
GTGCTGCCGAGGAGGAACAGGATCAGGATCATGAGGAAGAAGATGATGGA
CACGATCTGGACCCTCGATTTTATCATACCAACCTCCTTCGCTCGCCAGC
ATCAGCACCGATGGAGGAGGAAAGGACAAGAGAAGGCGATGAGATGGACG
TGGATGAGGTGGATGGACGCTTCTACAACGCACCTCGTGCCGCACCTGCC
GCACCTAGTTCCGCGGTAGTCGGCGTGCACAATCCTCCTCGGCACCTGTC
GTGGAGCGCGCCTTCCTTTCGCTTCCCCAGTTTCTTACGACCTGAGTCGG
CAGCCTTACCACCGTCCGAGAGCCCATCCAAGCGCGTGGCCTTTCGAGAG
CAGCTTGGGGAGCGCTGGCCCGAGCACATGCAGGAGCTGCCAAGCTTGTC
GTCTCGGCGGGCATCAGCAGCAGCGGCTTCGGCTTCTTGTTCTTCCTCCT
ACTACTCCAACTCGTCATCGTCCTCGCCGGCAATGCGGCACTCTAGCCGG
TTTTCGGGCACCCCGCATCCAGTCATTCCCCCGTGGCAGTCTCCGGTGCC
CCGCCCCGCTCGTGGACTCATGAAGAAGGCAACTCCGGTCGAAGGACGAG
AAGTGATAGAAGAAAGCGGACGATCGGTGTCAGATCGCATGAGTTTTACT
TCCTTACTTCACCGCAGAGAGGCTGGGGCCCGCATCAACAACGGTACTCA
ACCCCGGCGGCGGCAGGATGAGCAGAGCCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCACAAATATCAGCAACTACATCAACCGCACCAGCTTCTC
CCTGGTTGGCCCTCGATGCTGATGAAGGATGAGGTCTTCTCTTCCGGGAT
GCGTCGCCTGAAGATCTTTTCTCTGGGCCTGACCCTGCTGTCTTTCTGGC
TGCTGTGCCTGGGGGGCGTGCTCAAAGTGGGCTTGGCATTGTGGGTCAGG
AAGGAGTGCCCACCGGGTCACGTTCGAGGCGACATTTTGGGACTGTGGGG
GGAGTGTGTCGTCCCGCAGTCCACCGTCATCAAGCTCGTCAAGTCGGTGC
AGCGGCGCACAGTGGAAGATCTGTGTAAGGATCCGCGGGCGGCAGCAGGG
GCAGAGGGAGTGGGGTCATGGATAGGGAAGCAAATGACGGTGAACGTGCC
GCCGCGGTATCGGGAGGAAGAGTTGTGGGGCGATATCAGCATGCACAGCT
ACCCCTGGGGAGATTTAGCCTTGAGAGGTGTGGACCGTGAATGGAGAGGG
CCTGATCTGGCCACGGATTACTACGTGCACTTGCGGGGGCGGCCGGAGGT
CATGGGTGCATTGTGGCGGCAAGGTGCAGTGCTTTGTCGAATCAAGGTGT
TTCTCTATGAGATGTGGAATGTGCTCGCCGCGTTGTCGGTTCTTTCGGGG
CTCGTTCTGTCAGCCTTCCTCAAGGCGCGGGCGGAGATCCGGCAACGGCA
GCAAGTGGACAAGGTGAAACGGATGATAGTCAATATCCTGATTGCCGAGG
GGGAGATTGCCATCGACCTCGCCAAGGCCGATTTGCTGCATGGCTTGGAC
CGGGATTACCGTGAACTTTGCCTGACTAAATCAAGACTCAAGATCTTGTG
GCCTGCGGTGGTGCGGGCGGTGGAGAGGGACCCGCGGGTAAGCACGGCGC
CTAGGGAAATGAAAGGTCGCGCTATGCCTCATTGGGTCTGGCTAAGCAAA
AGGCTTCCAAAGCGGATTCGATATGAAGAAGAGTGTGGGGGATTGGAGGG
AGGAGAGGTTGGCAGTGATGTAGGAAAAGGAGGAAGAGGAGGAGTAGAAG
GAAGAATAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGC
AGACGAGACAAAGGCTGGCTGCTTAGACACGAGAACAAGAGAAACGAGGC
CGGCGGGGATCGGCGTGGGGGCGGACGGTATGAGTCGGTGCGTGCGGTGG
TGATATAGACAGAAGAAGATACATGATACTACTACCCAGCTGAGGAAGCG
GTGGCCGAGATATTGTGAAGCAATCTGGAGAAGCAGGTATGGAGAAAAAG
ATAGACTAGACACGACACGGAGGAATCTAAAGCAAAGTAAATAAATACAT
CAAAAGCAAATAAGGGAAGTAGTGCAAGTTGAACGGATGAACTGCTTGCT
TTACATGCTCCATTTTTTATTTGGAGATGATGGGGAAGGGCGTGAAAGCA
AAACTTGGGGTTGATCATGCATCCGCAAGACGTAAGCCGTGGATAAGTCG
AAGTGAACGCGACTGTACTGACTGTCATGGTTAATCTGTGAGAACAACCC
TGCCTTCTCCTCCTTCGTCACAAAGATATACAGAAACTTTTTGGACATCA
CCATCTTCCCTCCTTGTTTTTTCTCCGAGTGGCCGGCAGTAAAACTCCAT
GGCGACACTCGGTGTTAGACACGCCGATATCTGACAAGCCCCTGTGTGTA
AACTCCTGTCTTCTGGAGGTTCTACCGTCGAGAATAAAGGTAGTCTTCTC
ATCTTGTCGAGGACAATTAACGTCGGTATCTAGCTACCTCGCATTCGCAT
GGACTGCTATGGCGTATTGGAAAGATTACTACTCTCCTTTGTAGAATTTT
ACACGTGTGGTTGATTGACAATGACCTTACAACTACGCTGTGTGCTAGTA
GAGGGGTATGTAATTGCATACTTCACAGCAACACTTACAAACAAATCAAT
TCACTCATCAAGAGTGGCGCCACAAATTCACGAGATACAGACATCAATGT
CCTTGTCGAGAAATGACATCTCTCTCACTTTACCAAGCAAAGAATGCTCA
ATCAGTGATTTTCGT
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protein sequence of NO07G02130.1

>NO07G02130.1-protein ID=NO07G02130.1-protein|Name=NO07G02130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=861bp
MPLKKSALELAKEEQAMALEQRVLARLERESKSPNSQKHNSTSPRRATGH
LPATMRRLSSAIAMSRSQTKKEREREEEQEEDQEEDQEEEQEEEVEEAEM
EEQGKEEKEKEKEVDSRMKARPSQKKRSLKPMAGKRDGGGDWSGSGARKR
GTATGAAAHRQSNGKRVRLLRLQREEEYKDEVEDGEGGYVPPSSPLGVSA
LRRVGQSPCAAEEEQDQDHEEEDDGHDLDPRFYHTNLLRSPASAPMEEER
TREGDEMDVDEVDGRFYNAPRAAPAAPSSAVVGVHNPPRHLSWSAPSFRF
PSFLRPESAALPPSESPSKRVAFREQLGERWPEHMQELPSLSSRRASAAA
ASASCSSSYYSNSSSSSPAMRHSSRFSGTPHPVIPPWQSPVPRPARGLMK
KATPVEGREVIEESGRSVSDRMSFTSLLHRREAGARINNGTQPRRRQDEQ
SQQQQQQQQQQQHKYQQLHQPHQLLPGWPSMLMKDEVFSSGMRRLKIFSL
GLTLLSFWLLCLGGVLKVGLALWVRKECPPGHVRGDILGLWGECVVPQST
VIKLVKSVQRRTVEDLCKDPRAAAGAEGVGSWIGKQMTVNVPPRYREEEL
WGDISMHSYPWGDLALRGVDREWRGPDLATDYYVHLRGRPEVMGALWRQG
AVLCRIKVFLYEMWNVLAALSVLSGLVLSAFLKARAEIRQRQQVDKVKRM
IVNILIAEGEIAIDLAKADLLHGLDRDYRELCLTKSRLKILWPAVVRAVE
RDPRVSTAPREMKGRAMPHWVWLSKRLPKRIRYEEECGGLEGGEVGSDVG
KGGRGGVEGRIGGGGGEGGGGGGGGRRDKGWLLRHENKRNEAGGDRRGGG
RYESVRAVVI*
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Synonyms
Publications