NO07G01980, NO07G01980 (gene) Nannochloropsis oceanica

Overview
NameNO07G01980
Unique NameNO07G01980
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2973
Alignment locationchr7:578715..581687 -

Link to JBrowse

Properties
Property NameValue
DescriptionTyrosinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:578715..581687 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR008922Unchr_di-copper_centre
IPR035971CBD_sf
IPR000254Cellulose-bd_dom_fun
IPR002227Tyrosinase_Cu-bd
Homology
BLAST of NO07G01980 vs. NCBI_GenBank
Match: EWM27132.1 (tyrosinase [Nannochloropsis gaditana])

HSP 1 Score: 804.3 bits (2076), Expect = 2.800e-229
Identity = 469/660 (71.06%), Postives = 518/660 (78.48%), Query Frame = 0
Query:    1 MQPSSLGRVTVLVLVSFTQVWTGVEAQPGWGWEAQCIGQWLQCGGLNYWGPTNCCEGHQCEYVNDYWWQCNPTEAAPVRPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGPPFWEQDCFRVRKNVLSLTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRWYVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKNDSFCMREGPFAEWKNSKGGCLKRVGSDSYRFFSPAEVLDLIMGKTDLVGGFRPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQDCHNLLDPFNITETSFKADQIDVELAYAPGVTTRTMWSTRNLGYAYETDIMSAYTFLNTCHWFSLKPNPSLDLDQPSPRMPD--------PPLADPAVVP--VDPATLPAPAQPQKQQVDSSDNYRTKSPKLRGKQAVXXXXXXXXXXXXXXXXXXXXXXA----QGGFVATKEWAAAQAAVAPFEPHGKGLIVEENRVFTACMARVQRGEKSATRDECRREVLKRDCEMLGFICDLPETYRDGMHMEADENVFKEGSMCARSC 647
            MQ SS      ++L++  Q W  VEAQPG GWEAQCIGQWLQCGG NYWGPTNCC G +CEYVN+YWWQCNP++ AP+ P+                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGPPFWEQDCFRVRKN+LSLTP+ELADF+EALQ LK +G+YDTIT++HGNPTTFNLFHGNDYFLPWHRWYVLQIE+AVRDLGGKF+CF+MPYWDWTLDAGRET+SP+W  FGPMGKKNDSFCM+EGPFAEW NSKGGCLKR+GSDSYRFFSPAEVLDLIMGK  LVG FRPAFEAGAHSRPHLF+GGAMNSFASPDDPIFWLHH FVDKIW+MWQDCH +LDP NI +T FK DQ+DVELAYAPG+TTR+MWSTR LGY YETDIMSAYTFLNTCHW +LKPNP L++  P+P MP+        PP  +  V    + P+T+ A A  QK Q D   N   +S  LRGK  V                      +    Q   V TKEWAAAQA +AP+EPHGKGLIVEENRVFTACM   ++      R EC + VLKRDCEMLGFICDLP+TYRDGMHMEADENVFK+ SMCARSC
Sbjct:    1 MQTSSFNVAANVLLLTLIQFWAVVEAQPGMGWEAQCIGQWLQCGGRNYWGPTNCCPGTRCEYVNEYWWQCNPSQ-APLAPM------------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPPFWEQDCFRVRKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWTNSKGGCLKRIGSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQDCHRILDPANILDTDFKPDQVDVELAYAPGITTRSMWSTRELGYTYETDIMSAYTFLNTCHWSTLKPNPILNISLPAPPMPEISPETRQSPPFPEKGVTAPLLHPSTVAALADAQKHQ-DMRSNTTGQSSHLRGKNYVPYHKKHRIPSTNASIHTKTIDKSGQDMQAILVPTKEWAAAQAKMAPYEPHGKGLIVEENRVFTACMGSDRQDNVEKKRAECLKVVLKRDCEMLGFICDLPDTYRDGMHMEADENVFKKDSMCARSC 634          
BLAST of NO07G01980 vs. NCBI_GenBank
Match: CEO98724.1 (hypothetical protein PBRA_006838 [Plasmodiophora brassicae])

HSP 1 Score: 168.7 bits (426), Expect = 6.000e-38
Identity = 101/291 (34.71%), Postives = 149/291 (51.20%), Query Frame = 0
Query:  194 VRKNVLSLTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRWYVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIW--DFFGPMGKK--NDSFCMREGPFAEWKNSKGGCLKRVGSDSYRFFSPAEVLDLIMGKTDLVGGFRPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQDCH--NLLDPFNIT----------ETSFKADQIDVEL---------AYAPGVTTRTMWSTRNLGYAYETDIMSAYTFLNTCHWF 460
            VR+++  ++  E   ++ ALQA++ +G+YD I  VH +   FN  H  D FLPWHR Y+L +E+A+R +  +  C ++P+WDWT+DA     S +W  D+FG  G    N   C+R GPFA W      CL+R  + +  F +  E+L+ I    D    F  A E   H   H FIGG M    S D+P+F+LHH+F+D +WS+WQDCH  +L+   ++           ET      ++ +           Y P VT   +   R LGY+Y  D M   +   T  WF
Sbjct:  123 VRRDLRLISAGERDLYVGALQAMRRSGLYDEIMWVHADKFNFNYAHLTDGFLPWHREYLLMMEDALRSVSPETNCLAIPFWDWTVDAANPMASIVWRDDYFGGNGVDVGNGKKCVRSGPFA-WSVLGNDCLQRDLNGAGFFATREEILNTI-ASNDNYRDFSRALEL-FHDTVHRFIGGTMVLDNSADEPLFFLHHSFIDMLWSVWQDCHDYDLVPAASVRPGSNVFMGGYETGALGTVVNTDYNSVMPYRLSHYNPQVTPAGVHDIRKLGYSY--DNMHILSRPMTIEWF 408          
BLAST of NO07G01980 vs. NCBI_GenBank
Match: ORX82792.1 (Di-copper centre-containing protein, partial [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 154.1 bits (388), Expect = 1.500e-33
Identity = 77/210 (36.67%), Postives = 117/210 (55.71%), Query Frame = 0
Query:  195 RKNVLSLTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRWYVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKNDSFCMREGPFAEWKNS--KGGCLKR---VGSDSYRFFSPAEVLDLIMGKTDLVGGFRPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQDCH 400
            RK +  LT +E   F++A+  LK++G Y+ +   H N  +F   H    F PWHR ++ Q E A++ +  +    S+PYWDWTLD+     S ++ +FG  G      C+ +GPFA W+    +  CL+R   + S    F++P EV++ I+  +D     R A E G H   H+ + G M+   S +DP+FWLHH+FVDKIW+ WQ  H
Sbjct:    1 RKEIHQLTDQERNSFIDAVVRLKSDGTYNRLVESHIN--SFPYAHSTPGFFPWHRQFLKQFEMALQQIDSR---LSVPYWDWTLDSQAPELSKVFQWFGGNG-AGPRRCVEDGPFANWQIEIPERSCLRRTFNLQSKIAPFYAP-EVINQIISNSDTYEELREAIEGGPHGTVHMGVNGDMSRMGSTNDPLFWLHHSFVDKIWTEWQIAH 203          
BLAST of NO07G01980 vs. NCBI_GenBank
Match: ORX89317.1 (Di-copper centre-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 153.7 bits (387), Expect = 2.000e-33
Identity = 73/207 (35.27%), Postives = 109/207 (52.66%), Query Frame = 0
Query:  195 RKNVLSLTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRWYVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKNDSFCMREGPFAEWK--NSKGGCLKR--VGSDSYRFFSPAEVLDLIMGKTDLVGGFRPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQD 398
            R+    LT EE  +F+ A+  LK  G+YD + +VH +       H    F PWHR+++ Q ENA+R +        +PYWDWT+DA     S +W + G  G  N + C+ +GPF  W+    +  CL R      S   F  A+ ++ I+ ++      R   E G H+  H  IGG     +SP+DP+FW+HH F+DKIW+ WQ+
Sbjct:   31 RREFRQLTAEERTNFITAVNTLKQTGLYDQLVNVHLSYVPH--AHSTPPFFPWHRFFIYQFENALRSIDPN---MMLPYWDWTIDAWSPESSELWSWLGGNGSGNRASCLLDGPFGGWQAPYPRYHCLARRWDNGQSISSFWSAQSINNIIRRSRSYDELRGYIEPGPHANVHFGIGGDFRVMSSPNDPLFWMHHAFIDKIWADWQE 232          
BLAST of NO07G01980 vs. NCBI_GenBank
Match: ORX91456.1 (Di-copper centre-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 153.3 bits (386), Expect = 2.600e-33
Identity = 77/211 (36.49%), Postives = 111/211 (52.61%), Query Frame = 0
Query:  193 RVRKNVLSLTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRWYVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKNDSFCMREGPFAEW--KNSKGGCLKR--VGSDSYRFFSPAEVLDLIMGKTDLVGGFRPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQDCH 400
            RVR+    L+  E   F+EA+  LK +GVYD + +VH   T     H    F  WHR ++ Q ENA+R +       ++PYWDWT++AG    S IW +FG  G      C+ EGPF  W  +  +  CL R   G  +   F   + ++ I+ ++      R   E G H+  H  +GG     +SP+DP+FW+HH FVDKIW+ WQD +
Sbjct:   30 RVRREFRQLSNGEKTAFIEAINTLKQSGVYDRLVNVH--LTYVPHAHSTAPFFTWHRAFIHQFENALRAVN---PSLTLPYWDWTIEAGSPENSEIWRWFGGNGNGVGDSCLTEGPFGGWEARFPRRHCLSRRWDGGRTIPSFWSRQSVNNIIRRSRNYNELREYIEPGPHATVHFGVGGDFRVMSSPNDPLFWMHHAFVDKIWADWQDAN 235          
BLAST of NO07G01980 vs. NCBI_GenBank
Match: ORX96097.1 (Di-copper centre-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 152.5 bits (384), Expect = 4.400e-33
Identity = 85/238 (35.71%), Postives = 124/238 (52.10%), Query Frame = 0
Query:  187 WEQ-DCFRVRKNVLSLTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRWYVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKNDSFCMREGPFAEW--KNSKGGCLKR---VGSDSYRFFSPAEVLDLIMGKTDLVGGFRPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQDCH----------NLLDPFNIT 409
            W Q + + +R+ +  ++  E   F++A+  LK +G YD + S+H    ++   H    F PWHR Y+   E A++          +PYWDWTLD+    +SPIW++FG  G++ DS C+ +GPFA W  +N +  CL+R    G     F+SP E ++  +G +      R   E G H   H  IGG      S +DPIF+LHH FVDKIW+ WQ  H          NL+D  N T
Sbjct:   19 WAQCNQYNLRREIRQISSSERDAFIKAVNDLKRSGRYDELVSIHLRYVSY--AHSTPAFFPWHRQYIRIFELALQRFNPSVV---LPYWDWTLDSQAPEESPIWEWFGGNGREGDS-CVVDGPFAFWRARNPRPHCLQRQWDSGDKISAFWSP-ESINHFIGVSRSFDNLRNNIEPGPHGSVHNNIGGDFRYMTSANDPIFFLHHAFVDKIWADWQRSHRSMANDYGGVNLVDGRNAT 249          
BLAST of NO07G01980 vs. NCBI_GenBank
Match: ORX89391.1 (Di-copper centre-containing protein, partial [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 152.1 bits (383), Expect = 5.800e-33
Identity = 78/203 (38.42%), Postives = 108/203 (53.20%), Query Frame = 0
Query:  195 RKNVLSLTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRWYVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKNDSFCMREGPFAEWKN--SKGGCLKRV---GSDSYRFFSPAEVLDLIMGKTDLVGGFRPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIW 393
            RK +  ++  E   F+ A+QALK +G YD I ++H N   +   H    F PWHR Y+   E A++ +        +PYWDWTLD+     SPIW +FG  G+K+D+ C+  GPFA W++      CL+R+   G+    F+SP  +   I   +      R   E G H   H  IGG     ASP DPIF+LHH F+DKIW
Sbjct:    8 RKEIRQISTAERNAFISAVQALKKSGRYDQIVAIHWNYVPY--AHSTPAFFPWHRQYIKNFELALQQINPNVV---LPYWDWTLDSQAPETSPIWKWFGGNGRKSDN-CLVTGPFANWRSPLPNSHCLQRIWDSGNTISAFYSPESINSYIRTSSSF-DQLRNNIEPGPHGTVHNNIGGDFMYMASPSDPIFFLHHAFIDKIW 203          
BLAST of NO07G01980 vs. NCBI_GenBank
Match: ORX91458.1 (Di-copper centre-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 150.6 bits (379), Expect = 1.700e-32
Identity = 77/211 (36.49%), Postives = 110/211 (52.13%), Query Frame = 0
Query:  193 RVRKNVLSLTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRWYVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKNDSFCMREGPFAEW--KNSKGGCLKR--VGSDSYRFFSPAEVLDLIMGKTDLVGGFRPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQDCH 400
            RVR+    L+  E   F+EA+  LK +GVYD + +VH   T     H    F  WHR ++ Q ENA+R +       ++PYWDWT++A     S IW +FG  G      C+ EGPF  W  +  +  CL R   G  S   F   + L+ I+ ++      R   E G H+  H  +GG     +SP+DP+FW+HH FVDKIW+ WQ+ +
Sbjct:   30 RVRREFRQLSNGEKTAFIEAINTLKQSGVYDRLVNVH--LTYVPHAHSTAPFFTWHRVFIHQFENALRAVN---PSLTLPYWDWTIEARSPENSEIWRWFGGNGNGVGDSCLTEGPFGGWEARFPRRHCLSRRWDGGRSISSFWSRQSLNNIIRRSRDYDELREYIEPGPHAAVHFGVGGDFRVMSSPNDPLFWMHHAFVDKIWADWQEAN 235          
BLAST of NO07G01980 vs. NCBI_GenBank
Match: XP_004990390.1 (kunitz protease inhibitor 1 [Salpingoeca rosetta] >EGD77502.1 kunitz protease inhibitor 1 [Salpingoeca rosetta])

HSP 1 Score: 148.7 bits (374), Expect = 6.400e-32
Identity = 80/243 (32.92%), Postives = 120/243 (49.38%), Query Frame = 0
Query:  195 RKNVLSLTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRWYVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKNDSFCMREGPFAEWKNSKGGCLKRVGSDSYRFFSPAEVLDLIMGKTDLVGGFRPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQD------------CHNLLDPFNITETSFKADQIDVELAYAP 426
            R+ +  LTP+E+  F+ A+  L  +G + ++  VH N       HGN  FLPWHR ++ Q+E A+R++ G     ++PYWDWT+DA     SP+W+  G  G   DS C+  GPFA +      C++R     +   S  +V   ++  T  +     A     H   H+F+GG M ++ SP DP+F +HH FVDK+W  WQ              H  LDPF  T       +  + + Y P
Sbjct:  685 RREIRDLTPQEVTAFIGAVNMLYQSGTWTSLAEVHLNAAP--QAHGNPRFLPWHREFLSQVEMALREVSGN-CDLAIPYWDWTIDAMSPETSPVWNIVGGNGNAADS-CIVTGPFAHF----SPCIERDWDAGWAIPSFDDVA-AVLASTSFID--MAANLEALHGDLHMFVGGTMITYMSPYDPVFIMHHAFVDKLWDDWQTELGNGLQYPQSLLHTTLDPFPRTPADVLDSEAQLCVTYLP 916          
BLAST of NO07G01980 vs. NCBI_GenBank
Match: ORX97417.1 (Di-copper centre-containing protein, partial [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 148.3 bits (373), Expect = 8.400e-32
Identity = 77/209 (36.84%), Postives = 114/209 (54.55%), Query Frame = 0
Query:  193 RVRKNVLSLTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLF-HGNDYFLPWHRWYVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKNDSFCMREGPFAEWKNS--KGGCLKRVGSDSYRF--FSPAEVLDLIMGKTDLVGGFRPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQ 397
            RVRK +  +T  E   +L A+  LK    Y+    +H   +T+ ++ HG   F PWHR ++L  ENA+R++       ++PYWDWT+++     S I+ ++G  G +  S C+ +G FA W  S     CL+R   +  +   F  AEV++ I    D    FR +FE+G H + H  I G M    SP+DPIFWLHH FVDK++  WQ
Sbjct:   30 RVRKEIRQMTDNERNAYLRAINELKKRNKYEQFAYIH---STYEVYAHGTPDFFPWHRQFLLNFENALREID---PSINIPYWDWTIESQSPETSIIFKWYGGNG-QGRSKCVVDGAFARWTLSYPNRHCLQRSFDEGNKIGSFYSAEVINAIQDTNDDFDDFRQSFESGPHGQVHNGISGDMKKMISPNDPIFWLHHGFVDKVYYDWQ 231          
The following BLAST results are available for this feature:
BLAST of NO07G01980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27132.12.800e-22971.06tyrosinase [Nannochloropsis gaditana][more]
CEO98724.16.000e-3834.71hypothetical protein PBRA_006838 [Plasmodiophora b... [more]
ORX82792.11.500e-3336.67Di-copper centre-containing protein, partial [Basi... [more]
ORX89317.12.000e-3335.27Di-copper centre-containing protein [Basidiobolus ... [more]
ORX91456.12.600e-3336.49Di-copper centre-containing protein [Basidiobolus ... [more]
ORX96097.14.400e-3335.71Di-copper centre-containing protein [Basidiobolus ... [more]
ORX89391.15.800e-3338.42Di-copper centre-containing protein, partial [Basi... [more]
ORX91458.11.700e-3236.49Di-copper centre-containing protein [Basidiobolus ... [more]
XP_004990390.16.400e-3232.92kunitz protease inhibitor 1 [Salpingoeca rosetta] ... [more]
ORX97417.18.400e-3236.84Di-copper centre-containing protein, partial [Basi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000668NSK000668Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01980.1NO07G01980.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580646gene_2520Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g61gene3374Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01980.1NO07G01980.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01980 ID=NO07G01980|Name=NO07G01980|organism=Nannochloropsis oceanica|type=gene|length=2973bp
ACATGTTTGCCGACTCTCCGAGATGGAGATGCTGGGGCAGCGCGCAAATT
TTACAGCTCCCACATGCTGCATCTTCTCGCAAAGCGGGCGGGACATCGTC
AAACACGATGCCAACGGCCACCAACACATGGCTCAAATTCACTTGAACGT
TTTTGGCCGACAGCGGAGTGAGGGTGCACAGTGGTCGCACAGTAAGCTCT
TTGCAATTTATCTCAGCATGAGCGACTACAAGTAGCGATGCTTGGCGCCT
CTGTCTTGACACCCGCAAACATACAATGTATGGCCCATGCGCACCCACAT
GAGACCAAGATAATTGGCAAAAAGCACAATTTAAACCCTCACGTCAATCA
TCGCTGATGCGTGCACAAAAACACACATGACACAGCGCAAGAACCTTTAC
GCCTTTGATCATCATCAGCAACATTAGCATCGTCGTCGTCCCACTTGCCA
GCTAGCACGACGGCTGTGGCAGCCGCATTAGCACTTACCCACACCATAGC
CCAAGGAGCCGCTCCCTTACATCGTCGCCGCGAGAGTTGATCCACCAGAA
GATCGTATCATCGAACTCCAAGCCACACATTTATTAGCATGCAACCTTCA
TCTCTTGGCAGAGTTACAGTCCTGGTCCTTGTGAGCTTTACCCAGGTTTG
GACTGGTGTCGAGGCACAGCCCGGGTGGGGTTGGGAAGCACAATGCATCG
GGCAGTGGCTGCAGTGCGGCGGCTTAAATTACTGGGGTCCCACCAACTGT
TGTGAGGGTCATCAATGTGAGTACGTGAACGACTACTGGTGGCAGTGCAA
CCCCACCGAGGCAGCACCGGTCAGGCCTGTTGCCCCCGCTGCGCCAGCCG
GCCCCGTCGTTACGCCTGGATCTCCACCCCCAGCAGCAGTCCCAGTTAGC
CCAGCTGCTACGGATGCACCAGTTGCGCCGTCTGAGACTCCTGTTGTGGT
CAATCCACCTGTAGATGCACCGGTTGAAGTGAGACCACCAGGCGCTGTGC
CGGTCACCGTCCCGGATGCACCGGCCGTGGTCACGCCACCTGCTCCTGAT
GTTCCTGCTACCGTTCCTCCTGTTACTACTCCACCAGTGCCACCTGCGCC
GACGGTAGCACCTACGCAATTCCCCACCGAAGCGGGCCCGCCCTTTTGGG
AACAAGACTGTTTCCGCGTACGTAAAAATGTTTTGTCGCTGACCCCTGAG
GAGCTGGCTGACTTTTTAGAAGCGCTACAGGCTCTTAAAAATAATGGGGT
GTACGATACAATTACATCCGTCCACGGTAATCCAACTACCTTCAATCTCT
TTCACGGGAACGATTATTTCTTGCCTTGGCATCGTTGGTACGTGTTACAG
ATTGAGAATGCGGTGCGGGATTTAGGGGGGAAGTTTGCTTGTTTTTCGAT
GCCTTATTGGGATTGGACGTTGGACGCGGGGAGGGAGACGCAGTCTCCTA
TTTGGGACTTTTTTGGACCTATGGGGAAAAAGAACGACTCGTTCTGTATG
AGGGAGGGGCCGTTTGCCGAGTGGAAGAATAGTAAAGGGGGCTGTTTGAA
GCGGGTTGGCTCGGACTCGTATCGCTTTTTCTCCCCGGCGGAGGTCTTGG
ATCTGATCATGGGTAAGACGGATCTGGTAGGTGGCTTCCGGCCTGCCTTT
GAGGCTGGTGCACATTCTCGTCCGCATCTGTTCATTGGTGGAGCAATGAA
TAGTTTTGCTAGCCCCGACGACCCCATTTTCTGGCTGCATCACACCTTTG
TCGATAAAATCTGGTCGATGTGGCAGGACTGTCACAACTTGCTCGACCCC
TTTAATATTACAGAGACGAGTTTCAAAGCTGACCAAATAGATGTCGAACT
GGCATACGCCCCCGGGGTCACCACCCGCACCATGTGGTCCACCCGCAACT
TGGGCTATGCCTACGAGACAGATATTATGTCCGCCTACACTTTTCTCAAC
ACCTGTCACTGGTTCAGCCTCAAACCCAACCCCAGTCTGGACCTCGATCA
ACCATCCCCCCGCATGCCTGACCCGCCGTTGGCCGACCCTGCTGTTGTGC
CAGTAGATCCTGCAACATTGCCTGCGCCTGCCCAACCACAAAAGCAGCAG
GTGGATAGCAGCGACAATTATCGTACCAAAAGCCCTAAACTACGAGGCAA
GCAGGCTGTTGCGGCGCCACCGAAAGTGCAGCAGCAGCAGCAGCAGCACT
TGTCGTCAGCTGTAGTCTTGACACCAGCACAAGGTGGATTCGTGGCTACA
AAAGAATGGGCAGCTGCTCAAGCGGCTGTAGCACCTTTTGAGCCGCATGG
GAAGGGTTTAATTGTTGAAGAGAATCGCGTGTTTACAGCTTGTATGGCGC
GTGTACAGCGAGGCGAAAAGAGTGCGACCCGCGATGAGTGCCGCAGGGAA
GTGTTGAAGCGGGATTGTGAGATGTTGGGTTTCATTTGTGATTTGCCTGA
GACTTATAGGGATGGCATGCACATGGAGGCAGATGAAAATGTGTTTAAAG
AGGGTAGTATGTGTGCGCGTTCGTGTCAACGGCGCCTTTAAGGGAGAAGG
AGCGGGCATGAGTTGGAAGAGAAAAATAGGTATTTGGAAAGAGAGAAGTA
GATGGGTAGGAAAGAGAGAAGGGTTGTGTGTATGATCGTTGGAGACGACC
AGGGGCAGAGGAAATAGAGTAAAAGAGTAACTTGTTTGCACAGATGACAA
AAGAAGGGGAGAAGGACAACCTGTACGCGTATCCTGATTTTACGTTAATG
AATGTCGACTTCAATATCATGTCGGTGGCTCAGACTGTACATTTTTCATC
CGGAAAAAAGGAAGAGGACCAGTGAAATGATTGTCGCGGGTAACTGTTTC
CAGAGGATGGAATAGGATGTAATCGATTTTACAACCAAGTACACAATTTT
GCTGTGCCCGTCGGTTGTAATTCCTACAACTGTGAGAATAGCTGGAGCAA
AATGTGGAAGAAGAAATAATCTA
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protein sequence of NO07G01980.1

>NO07G01980.1-protein ID=NO07G01980.1-protein|Name=NO07G01980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=651bp
MQPSSLGRVTVLVLVSFTQVWTGVEAQPGWGWEAQCIGQWLQCGGLNYWG
PTNCCEGHQCEYVNDYWWQCNPTEAAPVRPVAPAAPAGPVVTPGSPPPAA
VPVSPAATDAPVAPSETPVVVNPPVDAPVEVRPPGAVPVTVPDAPAVVTP
PAPDVPATVPPVTTPPVPPAPTVAPTQFPTEAGPPFWEQDCFRVRKNVLS
LTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRW
YVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKND
SFCMREGPFAEWKNSKGGCLKRVGSDSYRFFSPAEVLDLIMGKTDLVGGF
RPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQDCHN
LLDPFNITETSFKADQIDVELAYAPGVTTRTMWSTRNLGYAYETDIMSAY
TFLNTCHWFSLKPNPSLDLDQPSPRMPDPPLADPAVVPVDPATLPAPAQP
QKQQVDSSDNYRTKSPKLRGKQAVAAPPKVQQQQQQHLSSAVVLTPAQGG
FVATKEWAAAQAAVAPFEPHGKGLIVEENRVFTACMARVQRGEKSATRDE
CRREVLKRDCEMLGFICDLPETYRDGMHMEADENVFKEGSMCARSCQRRL
*
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Synonyms
Publications