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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:578715..581687 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G01980.1 vs.
Match: EWM27132.1 (tyrosinase [Nannochloropsis gaditana]) HSP 1 Score: 837.0 bits (2161), Expect = 3.900e-239 Identity = 427/661 (64.60%), Postives = 486/661 (73.52%), Query Frame = 0
Query: 1 MQPSSLGRVTVLVLVSFTQVWTGVEAQPGWGWEAQCIGQWLQCGGLNYWGPTNCCEGHQCEYVNDYWWQCNPTEAAPVRPVAPAAPAGPVVTPGSPPPAAVPVSPA-ATDAPVAPSETPVVVNPPVDAPVEVRPPGAVPVTVPDAPAVVTPPAPDVPATVPPVTTPPVPPAPTVAPTQFPTEAGPPFWEQDCFRVRKNVLSLTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRWYVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKNDSFCMREGPFAEWKNSKGGCLKRVGSDSYRFFSPAEVLDLIMGKTDLVGGFRPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQDCHNLLDPFNITETSFKADQIDVELAYAPGVTTRTMWSTRNLGYAYETDIMSAYTFLNTCHWFSLKPNPSLDLDQPSPRMPD--------PPLADPAVVP--VDPATLPAPAQPQKQQVDSSDNYRTKSPKLRGKQAVAAPPKVQQQQQQHLSSAVVLTPA----QGGFVATKEWAAAQAAVAPFEPHGKGLIVEENRVFTACMARVQRGEKSATRDECRREVLKRDCEMLGFICDLPETYRDGMHMEADENVFKEGSMCARSC 647
MQ SS ++L++ Q W VEAQPG GWEAQCIGQWLQCGG NYWGPTNCC G +CEYVN+YWWQCNP++A P+ P+A AP PVVT G+ V+P+ T P AP P+ N P+D+PV P P P P+ + T PT FPTEAGPPFWEQDCFRVRKN+LSLTP+ELADF+EALQ LK +G+YDTIT++HGNPTTFNLFHGNDYFLPWHRWYVLQIE+AVRDLGGKF+CF+MPYWDWTLDAGRET+SP+W FGPMGKKNDSFCM+EGPFAEW NSKGGCLKR+GSDSYRFFSPAEVLDLIMGK LVG FRPAFEAGAHSRPHLF+GGAMNSFASPDDPIFWLHH FVDKIW+MWQDCH +LDP NI +T FK DQ+DVELAYAPG+TTR+MWSTR LGY YETDIMSAYTFLNTCHW +LKPNP L++ P+P MP+ PP + V + P+T+ A A QK Q D N +S LRGK V K + + + Q V TKEWAAAQA +AP+EPHGKGLIVEENRVFTACM ++ R EC + VLKRDCEMLGFICDLP+TYRDGMHMEADENVFK+ SMCARSC
Sbjct: 1 MQTSSFNVAANVLLLTLIQFWAVVEAQPGMGWEAQCIGQWLQCGGRNYWGPTNCCPGTRCEYVNEYWWQCNPSQA-PLAPMATPAPT-PVVTTGNT------VAPSDLTPDPTAPPSEPLE-NVPLDSPV----PSPAPTHRPHHWGHHHHPSSTSATS-------------TATPTPFPTEAGPPFWEQDCFRVRKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWTNSKGGCLKRIGSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQDCHRILDPANILDTDFKPDQVDVELAYAPGITTRSMWSTRELGYTYETDIMSAYTFLNTCHWSTLKPNPILNISLPAPPMPEISPETRQSPPFPEKGVTAPLLHPSTVAALADAQKHQ-DMRSNTTGQSSHLRGKNYVPYHKKHRIPSTNASIHTKTIDKSGQDMQAILVPTKEWAAAQAKMAPYEPHGKGLIVEENRVFTACMGSDRQDNVEKKRAECLKVVLKRDCEMLGFICDLPDTYRDGMHMEADENVFKKDSMCARSC 634
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G01980.1 ID=NO07G01980.1|Name=NO07G01980.1|organism=Nannochloropsis oceanica|type=mRNA|length=2973bp ACATGTTTGCCGACTCTCCGAGATGGAGATGCTGGGGCAGCGCGCAAATT TTACAGCTCCCACATGCTGCATCTTCTCGCAAAGCGGGCGGGACATCGTC AAACACGATGCCAACGGCCACCAACACATGGCTCAAATTCACTTGAACGT TTTTGGCCGACAGCGGAGTGAGGGTGCACAGTGGTCGCACAGTAAGCTCT TTGCAATTTATCTCAGCATGAGCGACTACAAGTAGCGATGCTTGGCGCCT CTGTCTTGACACCCGCAAACATACAATGTATGGCCCATGCGCACCCACAT GAGACCAAGATAATTGGCAAAAAGCACAATTTAAACCCTCACGTCAATCA TCGCTGATGCGTGCACAAAAACACACATGACACAGCGCAAGAACCTTTAC GCCTTTGATCATCATCAGCAACATTAGCATCGTCGTCGTCCCACTTGCCA GCTAGCACGACGGCTGTGGCAGCCGCATTAGCACTTACCCACACCATAGC CCAAGGAGCCGCTCCCTTACATCGTCGCCGCGAGAGTTGATCCACCAGAA GATCGTATCATCGAACTCCAAGCCACACATTTATTAGCATGCAACCTTCA TCTCTTGGCAGAGTTACAGTCCTGGTCCTTGTGAGCTTTACCCAGGTTTG GACTGGTGTCGAGGCACAGCCCGGGTGGGGTTGGGAAGCACAATGCATCG GGCAGTGGCTGCAGTGCGGCGGCTTAAATTACTGGGGTCCCACCAACTGT TGTGAGGGTCATCAATGTGAGTACGTGAACGACTACTGGTGGCAGTGCAA CCCCACCGAGGCAGCACCGGTCAGGCCTGTTGCCCCCGCTGCGCCAGCCG GCCCCGTCGTTACGCCTGGATCTCCACCCCCAGCAGCAGTCCCAGTTAGC CCAGCTGCTACGGATGCACCAGTTGCGCCGTCTGAGACTCCTGTTGTGGT CAATCCACCTGTAGATGCACCGGTTGAAGTGAGACCACCAGGCGCTGTGC CGGTCACCGTCCCGGATGCACCGGCCGTGGTCACGCCACCTGCTCCTGAT GTTCCTGCTACCGTTCCTCCTGTTACTACTCCACCAGTGCCACCTGCGCC GACGGTAGCACCTACGCAATTCCCCACCGAAGCGGGCCCGCCCTTTTGGG AACAAGACTGTTTCCGCGTACGTAAAAATGTTTTGTCGCTGACCCCTGAG GAGCTGGCTGACTTTTTAGAAGCGCTACAGGCTCTTAAAAATAATGGGGT GTACGATACAATTACATCCGTCCACGGTAATCCAACTACCTTCAATCTCT TTCACGGGAACGATTATTTCTTGCCTTGGCATCGTTGGTACGTGTTACAG ATTGAGAATGCGGTGCGGGATTTAGGGGGGAAGTTTGCTTGTTTTTCGAT GCCTTATTGGGATTGGACGTTGGACGCGGGGAGGGAGACGCAGTCTCCTA TTTGGGACTTTTTTGGACCTATGGGGAAAAAGAACGACTCGTTCTGTATG AGGGAGGGGCCGTTTGCCGAGTGGAAGAATAGTAAAGGGGGCTGTTTGAA GCGGGTTGGCTCGGACTCGTATCGCTTTTTCTCCCCGGCGGAGGTCTTGG ATCTGATCATGGGTAAGACGGATCTGGTAGGTGGCTTCCGGCCTGCCTTT GAGGCTGGTGCACATTCTCGTCCGCATCTGTTCATTGGTGGAGCAATGAA TAGTTTTGCTAGCCCCGACGACCCCATTTTCTGGCTGCATCACACCTTTG TCGATAAAATCTGGTCGATGTGGCAGGACTGTCACAACTTGCTCGACCCC TTTAATATTACAGAGACGAGTTTCAAAGCTGACCAAATAGATGTCGAACT GGCATACGCCCCCGGGGTCACCACCCGCACCATGTGGTCCACCCGCAACT TGGGCTATGCCTACGAGACAGATATTATGTCCGCCTACACTTTTCTCAAC ACCTGTCACTGGTTCAGCCTCAAACCCAACCCCAGTCTGGACCTCGATCA ACCATCCCCCCGCATGCCTGACCCGCCGTTGGCCGACCCTGCTGTTGTGC CAGTAGATCCTGCAACATTGCCTGCGCCTGCCCAACCACAAAAGCAGCAG GTGGATAGCAGCGACAATTATCGTACCAAAAGCCCTAAACTACGAGGCAA GCAGGCTGTTGCGGCGCCACCGAAAGTGCAGCAGCAGCAGCAGCAGCACT TGTCGTCAGCTGTAGTCTTGACACCAGCACAAGGTGGATTCGTGGCTACA AAAGAATGGGCAGCTGCTCAAGCGGCTGTAGCACCTTTTGAGCCGCATGG GAAGGGTTTAATTGTTGAAGAGAATCGCGTGTTTACAGCTTGTATGGCGC GTGTACAGCGAGGCGAAAAGAGTGCGACCCGCGATGAGTGCCGCAGGGAA GTGTTGAAGCGGGATTGTGAGATGTTGGGTTTCATTTGTGATTTGCCTGA GACTTATAGGGATGGCATGCACATGGAGGCAGATGAAAATGTGTTTAAAG AGGGTAGTATGTGTGCGCGTTCGTGTCAACGGCGCCTTTAAGGGAGAAGG AGCGGGCATGAGTTGGAAGAGAAAAATAGGTATTTGGAAAGAGAGAAGTA GATGGGTAGGAAAGAGAGAAGGGTTGTGTGTATGATCGTTGGAGACGACC AGGGGCAGAGGAAATAGAGTAAAAGAGTAACTTGTTTGCACAGATGACAA AAGAAGGGGAGAAGGACAACCTGTACGCGTATCCTGATTTTACGTTAATG AATGTCGACTTCAATATCATGTCGGTGGCTCAGACTGTACATTTTTCATC CGGAAAAAAGGAAGAGGACCAGTGAAATGATTGTCGCGGGTAACTGTTTC CAGAGGATGGAATAGGATGTAATCGATTTTACAACCAAGTACACAATTTT GCTGTGCCCGTCGGTTGTAATTCCTACAACTGTGAGAATAGCTGGAGCAA AATGTGGAAGAAGAAATAATCTA back to topprotein sequence of NO07G01980.1 >NO07G01980.1-protein ID=NO07G01980.1-protein|Name=NO07G01980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=651bp MQPSSLGRVTVLVLVSFTQVWTGVEAQPGWGWEAQCIGQWLQCGGLNYWG PTNCCEGHQCEYVNDYWWQCNPTEAAPVRPVAPAAPAGPVVTPGSPPPAA VPVSPAATDAPVAPSETPVVVNPPVDAPVEVRPPGAVPVTVPDAPAVVTP PAPDVPATVPPVTTPPVPPAPTVAPTQFPTEAGPPFWEQDCFRVRKNVLS LTPEELADFLEALQALKNNGVYDTITSVHGNPTTFNLFHGNDYFLPWHRW YVLQIENAVRDLGGKFACFSMPYWDWTLDAGRETQSPIWDFFGPMGKKND SFCMREGPFAEWKNSKGGCLKRVGSDSYRFFSPAEVLDLIMGKTDLVGGF RPAFEAGAHSRPHLFIGGAMNSFASPDDPIFWLHHTFVDKIWSMWQDCHN LLDPFNITETSFKADQIDVELAYAPGVTTRTMWSTRNLGYAYETDIMSAY TFLNTCHWFSLKPNPSLDLDQPSPRMPDPPLADPAVVPVDPATLPAPAQP QKQQVDSSDNYRTKSPKLRGKQAVAAPPKVQQQQQQHLSSAVVLTPAQGG FVATKEWAAAQAAVAPFEPHGKGLIVEENRVFTACMARVQRGEKSATRDE CRREVLKRDCEMLGFICDLPETYRDGMHMEADENVFKEGSMCARSCQRRL * back to topmRNA from alignment at chr7:578715..581687- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G01980.1 ID=NO07G01980.1|Name=NO07G01980.1|organism=Nannochloropsis oceanica|type=mRNA|length=2973bp|location=Sequence derived from alignment at chr7:578715..581687- (Nannochloropsis oceanica) ACATGTTTGCCGACTCTCCGAGATGGAGATGCTGGGGCAGCGCGCAAATT
TTACAGCTCCCACATGCTGCATCTTCTCGCAAAGCGGGCGGGACATCGTC
AAACACGATGCCAACGGCCACCAACACATGGCTCAAATTCACTTGAACGT
TTTTGGCCGACAGCGGAGTGAGGGTGCACAGTGGTCGCACAGTAAGCTCT
TTGCAATTTATCTCAGCATGAGCGACTACAAGTAGCGATGCTTGGCGCCT
CTGTCTTGACACCCGCAAACATACAATGTATGGCCCATGCGCACCCACAT
GAGACCAAGATAATTGGCAAAAAGCACAATTTAAACCCTCACGTCAATCA
TCGCTGATGCGTGCACAAAAACACACATGACACAGCGCAAGAACCTTTAC
GCCTTTGATCATCATCAGCAACATTAGCATCGTCGTCGTCCCACTTGCCA
GCTAGCACGACGGCTGTGGCAGCCGCATTAGCACTTACCCACACCATAGC
CCAAGGAGCCGCTCCCTTACATCGTCGCCGCGAGAGTTGATCCACCAGAA
GATCGTATCATCGAACTCCAAGCCACACATTTATTAGCATGCAACCTTCA
TCTCTTGGCAGAGTTACAGTCCTGGTCCTTGTGAGCTTTACCCAGGTTTG
GACTGGTGTCGAGGCACAGCCCGGGTGGGGTTGGGAAGCACAATGCATCG
GGCAGTGGCTGCAGTGCGGCGGCTTAAATTACTGGGGTCCCACCAACTGT
TGTGAGGGTCATCAATGTGAGTACGTGAACGACTACTGGTGGCAGTGCAA
CCCCACCGAGGCAGCACCGGTCAGGCCTGTTGCCCCCGCTGCGCCAGCCG
GCCCCGTCGTTACGCCTGGATCTCCACCCCCAGCAGCAGTCCCAGTTAGC
CCAGCTGCTACGGATGCACCAGTTGCGCCGTCTGAGACTCCTGTTGTGGT
CAATCCACCTGTAGATGCACCGGTTGAAGTGAGACCACCAGGCGCTGTGC
CGGTCACCGTCCCGGATGCACCGGCCGTGGTCACGCCACCTGCTCCTGAT
GTTCCTGCTACCGTTCCTCCTGTTACTACTCCACCAGTGCCACCTGCGCC
GACGGTAGCACCTACGCAATTCCCCACCGAAGCGGGCCCGCCCTTTTGGG
AACAAGACTGTTTCCGCGTACGTAAAAATGTTTTGTCGCTGACCCCTGAG
GAGCTGGCTGACTTTTTAGAAGCGCTACAGGCTCTTAAAAATAATGGGGT
GTACGATACAATTACATCCGTCCACGGTAATCCAACTACCTTCAATCTCT
TTCACGGGAACGATTATTTCTTGCCTTGGCATCGTTGGTACGTGTTACAG
ATTGAGAATGCGGTGCGGGATTTAGGGGGGAAGTTTGCTTGTTTTTCGAT
GCCTTATTGGGATTGGACGTTGGACGCGGGGAGGGAGACGCAGTCTCCTA
TTTGGGACTTTTTTGGACCTATGGGGAAAAAGAACGACTCGTTCTGTATG
AGGGAGGGGCCGTTTGCCGAGTGGAAGAATAGTAAAGGGGGCTGTTTGAA
GCGGGTTGGCTCGGACTCGTATCGCTTTTTCTCCCCGGCGGAGGTCTTGG
ATCTGATCATGGGTAAGACGGATCTGGTAGGTGGCTTCCGGCCTGCCTTT
GAGGCTGGTGCACATTCTCGTCCGCATCTGTTCATTGGTGGAGCAATGAA
TAGTTTTGCTAGCCCCGACGACCCCATTTTCTGGCTGCATCACACCTTTG
TCGATAAAATCTGGTCGATGTGGCAGGACTGTCACAACTTGCTCGACCCC
TTTAATATTACAGAGACGAGTTTCAAAGCTGACCAAATAGATGTCGAACT
GGCATACGCCCCCGGGGTCACCACCCGCACCATGTGGTCCACCCGCAACT
TGGGCTATGCCTACGAGACAGATATTATGTCCGCCTACACTTTTCTCAAC
ACCTGTCACTGGTTCAGCCTCAAACCCAACCCCAGTCTGGACCTCGATCA
ACCATCCCCCCGCATGCCTGACCCGCCGTTGGCCGACCCTGCTGTTGTGC
CAGTAGATCCTGCAACATTGCCTGCGCCTGCCCAACCACAAAAGCAGCAG
GTGGATAGCAGCGACAATTATCGTACCAAAAGCCCTAAACTACGAGGCAA
GCAGGCTGTTGCGGCGCCACCGAAAGTGCAGCAGCAGCAGCAGCAGCACT
TGTCGTCAGCTGTAGTCTTGACACCAGCACAAGGTGGATTCGTGGCTACA
AAAGAATGGGCAGCTGCTCAAGCGGCTGTAGCACCTTTTGAGCCGCATGG
GAAGGGTTTAATTGTTGAAGAGAATCGCGTGTTTACAGCTTGTATGGCGC
GTGTACAGCGAGGCGAAAAGAGTGCGACCCGCGATGAGTGCCGCAGGGAA
GTGTTGAAGCGGGATTGTGAGATGTTGGGTTTCATTTGTGATTTGCCTGA
GACTTATAGGGATGGCATGCACATGGAGGCAGATGAAAATGTGTTTAAAG
AGGGTAGTATGTGTGCGCGTTCGTGTCAACGGCGCCTTTAAGGGAGAAGG
AGCGGGCATGAGTTGGAAGAGAAAAATAGGTATTTGGAAAGAGAGAAGTA
GATGGGTAGGAAAGAGAGAAGGGTTGTGTGTATGATCGTTGGAGACGACC
AGGGGCAGAGGAAATAGAGTAAAAGAGTAACTTGTTTGCACAGATGACAA
AAGAAGGGGAGAAGGACAACCTGTACGCGTATCCTGATTTTACGTTAATG
AATGTCGACTTCAATATCATGTCGGTGGCTCAGACTGTACATTTTTCATC
CGGAAAAAAGGAAGAGGACCAGTGAAATGATTGTCGCGGGTAACTGTTTC
CAGAGGATGGAATAGGATGTAATCGATTTTACAACCAAGTACACAATTTT
GCTGTGCCCGTCGGTTGTAATTCCTACAACTGTGAGAATAGCTGGAGCAA
AATGTGGAAGAAGAAATAATCTA back to topCoding sequence (CDS) from alignment at chr7:578715..581687- >NO07G01980.1 ID=NO07G01980.1|Name=NO07G01980.1|organism=Nannochloropsis oceanica|type=CDS|length=1953bp|location=Sequence derived from alignment at chr7:578715..581687- (Nannochloropsis oceanica) ATGCAACCTTCATCTCTTGGCAGAGTTACAGTCCTGGTCCTTGTGAGCTT TACCCAGGTTTGGACTGGTGTCGAGGCACAGCCCGGGTGGGGTTGGGAAG CACAATGCATCGGGCAGTGGCTGCAGTGCGGCGGCTTAAATTACTGGGGT CCCACCAACTGTTGTGAGGGTCATCAATGTGAGTACGTGAACGACTACTG GTGGCAGTGCAACCCCACCGAGGCAGCACCGGTCAGGCCTGTTGCCCCCG CTGCGCCAGCCGGCCCCGTCGTTACGCCTGGATCTCCACCCCCAGCAGCA GTCCCAGTTAGCCCAGCTGCTACGGATGCACCAGTTGCGCCGTCTGAGAC TCCTGTTGTGGTCAATCCACCTGTAGATGCACCGGTTGAAGTGAGACCAC CAGGCGCTGTGCCGGTCACCGTCCCGGATGCACCGGCCGTGGTCACGCCA CCTGCTCCTGATGTTCCTGCTACCGTTCCTCCTGTTACTACTCCACCAGT GCCACCTGCGCCGACGGTAGCACCTACGCAATTCCCCACCGAAGCGGGCC CGCCCTTTTGGGAACAAGACTGTTTCCGCGTACGTAAAAATGTTTTGTCG CTGACCCCTGAGGAGCTGGCTGACTTTTTAGAAGCGCTACAGGCTCTTAA AAATAATGGGGTGTACGATACAATTACATCCGTCCACGGTAATCCAACTA CCTTCAATCTCTTTCACGGGAACGATTATTTCTTGCCTTGGCATCGTTGG TACGTGTTACAGATTGAGAATGCGGTGCGGGATTTAGGGGGGAAGTTTGC TTGTTTTTCGATGCCTTATTGGGATTGGACGTTGGACGCGGGGAGGGAGA CGCAGTCTCCTATTTGGGACTTTTTTGGACCTATGGGGAAAAAGAACGAC TCGTTCTGTATGAGGGAGGGGCCGTTTGCCGAGTGGAAGAATAGTAAAGG GGGCTGTTTGAAGCGGGTTGGCTCGGACTCGTATCGCTTTTTCTCCCCGG CGGAGGTCTTGGATCTGATCATGGGTAAGACGGATCTGGTAGGTGGCTTC CGGCCTGCCTTTGAGGCTGGTGCACATTCTCGTCCGCATCTGTTCATTGG TGGAGCAATGAATAGTTTTGCTAGCCCCGACGACCCCATTTTCTGGCTGC ATCACACCTTTGTCGATAAAATCTGGTCGATGTGGCAGGACTGTCACAAC TTGCTCGACCCCTTTAATATTACAGAGACGAGTTTCAAAGCTGACCAAAT AGATGTCGAACTGGCATACGCCCCCGGGGTCACCACCCGCACCATGTGGT CCACCCGCAACTTGGGCTATGCCTACGAGACAGATATTATGTCCGCCTAC ACTTTTCTCAACACCTGTCACTGGTTCAGCCTCAAACCCAACCCCAGTCT GGACCTCGATCAACCATCCCCCCGCATGCCTGACCCGCCGTTGGCCGACC CTGCTGTTGTGCCAGTAGATCCTGCAACATTGCCTGCGCCTGCCCAACCA CAAAAGCAGCAGGTGGATAGCAGCGACAATTATCGTACCAAAAGCCCTAA ACTACGAGGCAAGCAGGCTGTTGCGGCGCCACCGAAAGTGCAGCAGCAGC AGCAGCAGCACTTGTCGTCAGCTGTAGTCTTGACACCAGCACAAGGTGGA TTCGTGGCTACAAAAGAATGGGCAGCTGCTCAAGCGGCTGTAGCACCTTT TGAGCCGCATGGGAAGGGTTTAATTGTTGAAGAGAATCGCGTGTTTACAG CTTGTATGGCGCGTGTACAGCGAGGCGAAAAGAGTGCGACCCGCGATGAG TGCCGCAGGGAAGTGTTGAAGCGGGATTGTGAGATGTTGGGTTTCATTTG TGATTTGCCTGAGACTTATAGGGATGGCATGCACATGGAGGCAGATGAAA ATGTGTTTAAAGAGGGTAGTATGTGTGCGCGTTCGTGTCAACGGCGCCTT TAA back to top
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