NO07G01820, NO07G01820 (gene) Nannochloropsis oceanica

Overview
NameNO07G01820
Unique NameNO07G01820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1175
Alignment locationchr7:542865..544039 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:542865..544039 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G01820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL095nonsL095Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR135ngnoR135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01820.1NO07G01820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01820.1NO07G01820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01820 ID=NO07G01820|Name=NO07G01820|organism=Nannochloropsis oceanica|type=gene|length=1175bp
GTTCAGGGAAGCTCTGACTAGAAATTACAGGAGCGTAGAAGGAAGGCACA
TAGAGGAGCTAAATGTGTTGGTAGAGTTAGAGCAGGAGATAGAGGTGCTG
GCGGGGGCAAAGAAATGATCAACTATGGCGTCGTTCTTTCCCCCTGCAGT
TTCTCTACCGACGCCTGAGCCTATCTATTCATCATCATCGTTTCTTACTT
GTAGTTCTTTTTGGGTTCCTACATCCCTCTAGAACTATCGCATGCAACCT
GCGTCTTCGAGGACTTGCATACGAGGGGGAGCCTTCCAACAATAAAATGT
TGCATATTCACCCCTTATTTCCTTGTCCGAGTTTTCCTAGCGACTTTGAC
AGGTTTTTTGACCAGGCAAAGTCCCCGGACGGCCCACACAGGGCCAGGAG
GAGAGGGGGAAGGAGGATAAAAGAGGAGGCCAGCGGGAACGCTACACATA
GAGTGCGACATGAAAAAGCGTGTGTGCCGCCTCCTTTGCGTCGCATTTGC
TTCACCCACTGCTTCCCTCCAGCCAACGAAGACGACGAGGAAATATCGAG
GAGCAGTACAAACAGTACGAGCACTAGCAGTAGCAGGAGGGGGAAGGGGA
GGAGGGGGATGGGGACAAGGAAAAAAAAGCTGGAGGGGCTCGAGGAGAAG
TAGGAGCAGCAGAAGCACGAGCAGCAGGGAGAGGGGGAGGGGGTGTGGAG
GCAGGAGCGGGAGGAGGAGGTGTGGGAGCAGGAGCGGGAGGTAGAGGAGA
AGTTAGAAGAGAAGCAGGATTAAGAGGGAGAGGATGTGTGGGAGGATGTA
TGGGAGTAGGAACAGGAGGGAGGGGAGGTTTGGGAGCAGGAGCAGGAGCG
GGAGAGAGAGGGGGGGGGGGAGGACGGAGGGAACGTAGAGGATGGGTGGG
AGGGGAAGCAGCGGCAGCTGAAGCAGCAGAACCACCGGCAGCAGTAGCAG
TAGCAGTAGCAGTTGCAGTAGGAGGAGGAGGAGGGGGAGGGAAAGAAGGG
AGAGAAGGCGGAGGAGAAGGAGGAGGGAAAGGAGGGAGAGATAGCGGAGG
AGGAGAAGCAGGAGGAGGAGGGAGAGAAGGGAGAGGGAGAGAAGGCGGCA
GCGGAGGAGGAGAAGGAGGAGGCCGCGGTGGTGGTGGCGGTGGAGGAGGA
GGAGGAGGAGGATGAGGAGGAGGAG
back to top

protein sequence of NO07G01820.1

>NO07G01820.1-protein ID=NO07G01820.1-protein|Name=NO07G01820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=122bp
MGVGTGGRGGLGAGAGAGERGGGGGRRERRGWVGGEAAAAEAAEPPAAVA
VAVAVAVGGGGGGGKEGREGGGEGGGKGGRDSGGGEAGGGGREGRGREGG
SGGGEGGGRGGGGGGGGGGGG*
back to top
Synonyms
Publications