NO07G01690, NO07G01690 (gene) Nannochloropsis oceanica

Overview
NameNO07G01690
Unique NameNO07G01690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3524
Alignment locationchr7:509181..512704 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:509181..512704 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO07G01690 vs. NCBI_GenBank
Match: EWM27135.1 (hypothetical protein Naga_100010g25 [Nannochloropsis gaditana])

HSP 1 Score: 115.9 bits (289), Expect = 7.900e-22
Identity = 56/78 (71.79%), Postives = 63/78 (80.77%), Query Frame = 0
Query:  986 AFTIPRHEPRRKDIVQDLQQKLEVAIANSRILQVSRRRDRVQEGEPIDKEASFLRPYLKGWDVHDPVTGEALREPKAP 1064
            +F IPR EPRRK++VQDLQQ+LE A+ + RILQVS+RRDRV EG  IDKEASFLRPYL G  VHD  TGE L EPKAP
Sbjct:  580 SFVIPRWEPRRKEVVQDLQQQLEAAVKDCRILQVSKRRDRVMEGSAIDKEASFLRPYLSGCTVHDSATGEPLHEPKAP 657          
The following BLAST results are available for this feature:
BLAST of NO07G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27135.17.900e-2271.79hypothetical protein Naga_100010g25 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000700NSK000700Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01690.1NO07G01690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|628538gene_2492Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g25gene3346Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01690.1NO07G01690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01690 ID=NO07G01690|Name=NO07G01690|organism=Nannochloropsis oceanica|type=gene|length=3524bp
ATGCCTCCCAAAAAGAAGGCAGGCCGACCCCAAGCAAAGCACCCAGCGGT
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACCCGTGCCACCA
CTTCTGTAGACGCACCGGTAGTACCGCCTCCATGCGAAACGTCTTCAACT
TTTGGTAGGCGAACGAGGGCCGGCGGGGTGTCAGACACTCCCTCCCTTCC
TTGCCCCCCGGAGGCCGCTTCCCCTACTGCTGCTCTTGCTGGTGCTGTTC
TCCCCTCCCCGACCACACGCAGCAGCAGGACACTCCCCTCTCCCTCTACT
CGCAGCAGCTCTAGCAGTAGTGTCCCTTCCTATCCTTCCCCACGCACCAC
ACGGCGTAGCGCTGTGTCCGTGCCCGTTGACAACGCCCCCCCTTTGCCAA
CCATGTCACTCCCTCCCTATCACCGAAAAAGTTCCTCTGCTGCGAACGAG
GAGGAGGCGGCAATGGAATTTTCTGTTTCCGCAGTAAACATCAAGAAGAC
TGTGAACGAAAAGGAAGCGGAGGGGGATAAGCAGGCCGCTGGGCCTCAGG
AGCATGCACCGGAGATAGAGGAAGAAGCAGGGAGCGTAAAGGAGGAGAAA
GGGTCAAGAGAGAAGAGAGAGAAGGAATTCCCAACGACGGCTAAAGCCTC
CTCACCACTGTTACCCTCTCAGCTTCCATATCTGCCGCAATCACATGAAA
CTATGGACGTGGAGGAACAAGATGAGGAGCATCTGCAGCCTCAGCAACAG
CAAGATGGGCCTGAGGAGGAGCAAGATGAGGAAGACAAGGGTGGAGGTCG
AGGAAAGGGGAAGGGTGGTAGTGGGAGCACGAATATGTCAGCTAAGAGGA
AAGGGGCTGCTGCTGCATCTCCGCGGGTCGGTAGCGCAAAGCGGGGGAGG
CTGTCTCGACATGTGGCCAAGAAGAACGAAGCGGAGGACGAAGGAGAGGA
CAACGGGGGTGAGGAAAAGACGGTGATGACTGAGGCATCGACAGCAGCAG
CGTCAGCAGGAACAATAGAGGCACCAGCAGAAAAGGAAGAGGAAATAGGA
GGGTTCATGACAGGGGAGCCTGATGAGGAGGAAGAGGGGCAACAGCAGCA
GCTGCAGCTGCGGCGGCAGGAGTTATTGGAGCCTGTAGCAGTAGCAGAAG
CATCATTAATAGAGGAGCAAAATAAGAAAATAAGAGCAGAGAAGAAAATG
AAAAGGAAACAAGAGCATGAGAATAAGGAGGAGGGAGATGAAGGTCCTGT
GCGATCACCATCGCCGCCACCACTGATGCTCTCCCGGCCACGACAAGAAG
TCGGCCCACAAGGGGATAATAAAGAGAGGGAGGAGGAGGAGCAGCAGCAG
CAGCACCAGCACGAGGACCCGCACCAACGACAGGAGGAGGAGCAGGAGCA
TGTTGAACAACGCGCCCCGACGGCAAAGGCAATGGAGGAGCAGGCTGATG
GGTCGATGCGCAAGTTGGAGGTGGAGGGAAGGGGAGGGAGCAAGGCAGGT
TACAATACTTCAAAGCGCCAGGGGAAAAGCGATCAACAAGGTACAGTCCT
CGGGCCGCCCTCGATCACTCAAACAATCACCACCGAGACCACCTCCATGG
GCAGCAACAAGAGGAAAGGCAAAAGCAAGGTTACTGGGCCGAAGGACGGA
GGGGAAGCAGGGGTAGGGATAGATTTGGAGAAAGAGGAGGTGGGAGAAAT
GGAGAAGATTAAGATGGTAGTGAAGGGTGAGGCAATGCTCTTGACCACGC
CTTCCCTCGTGCAGAAAGGAGTGGCGAAGGACGAGGAGGAGGGCAACGGC
AAGGACAGTGTCCCTTCCGCCTCTCCCGCGATTCCACCCATTGCCGCTCC
AGCCTCCCTACCCAACGAGGCAGCAGCAGCAGCAACAGCAGCCACAGCAG
CAGCAGCAACAGCAGCAGTAGCAGTAGCAGCAGCAGCAACAGTAAATACA
AATGAAATGCACCCCGCCGCGCCAGTGAAAAAAGACGTGGATATCCTCCA
CGATCACACGCTTGCGCCTGTTCCTGTTATGATGCCTCCTCCTCCTTCTG
CTGCTGCTCCTGTTGCTGCCACTCCTGCTGTTGGAAAAGATATGTGGGAT
CTAGTCGGAACAGAGACAGACAGGGATCGGAAAAAGAGGCTCAAGCTGCA
GAAAGAGCAGCAGCAGCAGCATTTTGCATCGTCGACTCTGGGGTTTGATG
ATATGAAAAGTACTTCTCAGGCTACTGCTGCTACCACTGATACTTCCGCT
TCCAGTGCTGTGGTGTCGACCATGGGGTTGACGGCCATGAGTCGGATTCC
TAAAAAGACGAGTAGCATCACCGCCAGCACCAGCAGCAGCAGCAAAGGAG
GAAGGGGAGCAACAGCAGCAGCGTCTGAAGTCATCCCTTCGTCCTCGTCC
TCGTCCTCGTCCTCGTCCTCGTCTTCTCTATCCTCCGGGAGGACGTGGGC
TGGCAGCAGATACTATCAGCAGCAAGAAGAAGGAGGCGAGGGAAGGAGAA
GAGGACAGGAAAACATTGGTAGCATTAGCAGCAGCAGCAGGAGCGAGGCA
ATGGCATCGTTGTCGTCATCGTCGTCGTCGAGAGGAGGGGAATGGAGGGA
AGGAGCAAGAGAGGAGAGAGGGGGGAGAAGAGAAGGAGGGGAACGCGACC
GATCTCGAGGCGGAGAAAAAGAAGGAGAGCGAGACGCATCCCGTTGGGTC
GGCGGTAACAAGGGAGGAATGAAGTCCGGAAGAGGCGAAGAAGACGGCCG
TAGCAGCAGGGGTGCGGCAGCTGCAAGCTTTGGAGGGACACGGCAACAAC
ATTCACCATCGGCGTCTTTTTCCTCCTCTTCATCCTCCTCCTCCATACCC
AACTACATGCCTCCCCCCTCCCTCGTTCCAAGCAGCGCCACCACCACCGC
TTCACGCCCAACCACAAGTACCAGCGCTTCTACCCCTGCCAACCCTTCAT
TCGACGCCTTCACCATCCCACGGCACGAACCCCGCCGCAAAGACATTGTC
CAAGATCTGCAACAGAAGCTTGAGGTTGCCATCGCCAACTCCCGCATCTT
GCAAGTCTCCAGACGCCGGGATCGGGTGCAAGAAGGCGAGCCCATCGACA
AGGAAGCTTCATTTCTCCGCCCCTACCTCAAGGGATGGGATGTCCATGAC
CCTGTGACAGGAGAAGCATTACGCGAGCCCAAAGCGCCAGTTGATGTACC
GTTATTAGAGGAAGACTTTGCAGCGTGCAGTGCACATGGGAGGCAGGGGG
ATCATGACTCGAAGTGGTGGGGGGTGAGACTGACTAACTTTGATGAGGAT
GGAGGAGGAGGGGGGGGAGGAGGGGGAGGGGGAGGGGGATACCGAAGGTG
AGAAACGGACAAAAGAAAAAAATGAGGAAAATTAAAAAAATCATGGCTTT
CTCAAATGAAGAAAGGCATGAAGCATTATATTCGAAAGTGGCTGACGGAT
TGCTGGACCGTGCGATGTGTGTTTGAGGGTAGTGGGTTGTAGAAGGGGGT
TGAGCAGGCCTTGGTAATCAACAT
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protein sequence of NO07G01690.1

>NO07G01690.1-protein ID=NO07G01690.1-protein|Name=NO07G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1117bp
MPPKKKAGRPQAKHPAVAAAAAAAAAAAATRATTSVDAPVVPPPCETSST
FGRRTRAGGVSDTPSLPCPPEAASPTAALAGAVLPSPTTRSSRTLPSPST
RSSSSSSVPSYPSPRTTRRSAVSVPVDNAPPLPTMSLPPYHRKSSSAANE
EEAAMEFSVSAVNIKKTVNEKEAEGDKQAAGPQEHAPEIEEEAGSVKEEK
GSREKREKEFPTTAKASSPLLPSQLPYLPQSHETMDVEEQDEEHLQPQQQ
QDGPEEEQDEEDKGGGRGKGKGGSGSTNMSAKRKGAAAASPRVGSAKRGR
LSRHVAKKNEAEDEGEDNGGEEKTVMTEASTAAASAGTIEAPAEKEEEIG
GFMTGEPDEEEEGQQQQLQLRRQELLEPVAVAEASLIEEQNKKIRAEKKM
KRKQEHENKEEGDEGPVRSPSPPPLMLSRPRQEVGPQGDNKEREEEEQQQ
QHQHEDPHQRQEEEQEHVEQRAPTAKAMEEQADGSMRKLEVEGRGGSKAG
YNTSKRQGKSDQQGTVLGPPSITQTITTETTSMGSNKRKGKSKVTGPKDG
GEAGVGIDLEKEEVGEMEKIKMVVKGEAMLLTTPSLVQKGVAKDEEEGNG
KDSVPSASPAIPPIAAPASLPNEAAAAATAATAAAATAAVAVAAAATVNT
NEMHPAAPVKKDVDILHDHTLAPVPVMMPPPPSAAAPVAATPAVGKDMWD
LVGTETDRDRKKRLKLQKEQQQQHFASSTLGFDDMKSTSQATAATTDTSA
SSAVVSTMGLTAMSRIPKKTSSITASTSSSSKGGRGATAAASEVIPSSSS
SSSSSSSSSLSSGRTWAGSRYYQQQEEGGEGRRRGQENIGSISSSSRSEA
MASLSSSSSSRGGEWREGAREERGGRREGGERDRSRGGEKEGERDASRWV
GGNKGGMKSGRGEEDGRSSRGAAAASFGGTRQQHSPSASFSSSSSSSSIP
NYMPPPSLVPSSATTTASRPTTSTSASTPANPSFDAFTIPRHEPRRKDIV
QDLQQKLEVAIANSRILQVSRRRDRVQEGEPIDKEASFLRPYLKGWDVHD
PVTGEALREPKAPVDVPLLEEDFAACSAHGRQGDHDSKWWGVRLTNFDED
GGGGGGGGGGGGGYRR*
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Synonyms
Publications